Mon May 8 21:50:02 UTC 2023 I: starting to build yaha/bookworm/armhf on jenkins on '2023-05-08 21:49' Mon May 8 21:50:02 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_21/5631/console.log Mon May 8 21:50:02 UTC 2023 I: Downloading source for bookworm/yaha=0.1.83-3 --2023-05-08 21:50:02-- http://cdn-fastly.deb.debian.org/debian/pool/main/y/yaha/yaha_0.1.83-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1941 (1.9K) [text/prs.lines.tag] Saving to: ‘yaha_0.1.83-3.dsc’ 0K . 100% 44.7M=0s 2023-05-08 21:50:02 (44.7 MB/s) - ‘yaha_0.1.83-3.dsc’ saved [1941/1941] Mon May 8 21:50:02 UTC 2023 I: yaha_0.1.83-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: yaha Binary: yaha Architecture: any Version: 0.1.83-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/GregoryFaust/yaha Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/yaha Vcs-Git: https://salsa.debian.org/med-team/yaha.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: yaha deb science optional arch=any Checksums-Sha1: df230e7cf1745ee30a8f67d07c136e08f9d12038 104294292 yaha_0.1.83.orig.tar.gz b0d910e3d817b6bad1780e569a594fcde22bb8aa 5124 yaha_0.1.83-3.debian.tar.xz Checksums-Sha256: 76e052cd92630c6e9871412e37e46f18bfbbf7fc5dd2f345b3b9a73eb74939ef 104294292 yaha_0.1.83.orig.tar.gz 4652f7804fb4e083d35e8afd0d0b8d9ac6fc31556e549fecd36894eee52ae94a 5124 yaha_0.1.83-3.debian.tar.xz Files: 1641c06cdb57a8220c9fa1e1aaa5e531 104294292 yaha_0.1.83.orig.tar.gz 92e8f8e5a5a36eb224ecbe7956e57fd7 5124 yaha_0.1.83-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmEZTdQUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafHFtg/7BohncoSYqKOcLhSjjhtcDxnouGN5 rPDrohdnDpaAMRNnCQ9keKGd2jFzhRORMknXZxZkAuK3gGv12p6LEIwYh9HVhDqX JqQjEi83mN9dmRxX21RK80db/ah8N/LsOuyhghyBBbCRIB3y4buB8fofDQWJoLdr Tw7ubuIGQYvnMppvNDsQsAvhO+g9H61iN8XfqmKLil5li5QzpQpO5uCnvydNrQ3V 3ltbBFAt1ZK9Rk1HkJv7qt6w1XblR5Cqwf2pQSTSrvmK1zqLguS3ddOg/XMJXi2t CfZ+2D6dgLce5xPMWmaUFssGCQxiCKHQ17cFGxrRY74ijHxnFWZgkCbcvFwYD+1Y srsef4pkN6enucSFgnP3OHm84SkqW6OY8fI54Z6YPCUv28oPveOJnGNqx/Uj3dcL 4cqNFF39hRl5xpoA+wA9c9FXXq84ruAF36o9TlgSp9QJ30w3n6km5jp8RVUjhnWe P3d+x2Dp2cPW7Zyb+31K6G6aMsg/Q23w/mr55lGtSGXXz0mQBDFtc8HVMRkPVPxb BFGiaMbvu0Su/+tjXeyn/OCY3rkA9LLGJILDJjwa6bE+urEt7//3QO6Kjw7anwvT bNvzb0qktM9JJHPWdJdiHbwVBvuWFxqGtwe4an78DGuTdPg4MgyCY4eFr2Zhwchd pzWNQc+C40RZOgs= =1G87 -----END PGP SIGNATURE----- Mon May 8 21:50:02 UTC 2023 I: Checking whether the package is not for us Mon May 8 21:50:03 UTC 2023 I: Starting 1st build on remote node cbxi4a-armhf-rb.debian.net. Mon May 8 21:50:03 UTC 2023 I: Preparing to do remote build '1' on cbxi4a-armhf-rb.debian.net. Mon May 8 21:59:51 UTC 2023 I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 8 09:50:24 -12 2023 I: pbuilder-time-stamp: 1683582624 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [yaha_0.1.83-3.dsc] I: copying [./yaha_0.1.83.orig.tar.gz] I: copying [./yaha_0.1.83-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Aug 15 05:24:36 2021 -12 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./yaha_0.1.83-3.dsc: no acceptable signature found dpkg-source: info: extracting yaha in yaha-0.1.83 dpkg-source: info: unpacking yaha_0.1.83.orig.tar.gz dpkg-source: info: unpacking yaha_0.1.83-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/9536/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='66b8c0713c6a4ed980fc6697edc97a07' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='9536' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/pbuilderrc_XRWF --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/b1 --logfile b1/build.log yaha_0.1.83-3.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux cbxi4a 5.10.0-22-armmp #1 SMP Debian 5.10.178-3 (2023-04-22) armv7l GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/9536/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After unpacking 67.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Fetched 18.0 MB in 6s (3111 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... 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Setting up libelf1:armhf (0.188-2.1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/yaha-0.1.83/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../yaha_0.1.83-3_source.changes dpkg-buildpackage: info: source package yaha dpkg-buildpackage: info: source version 0.1.83-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Shruti Sridhar dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/yaha-0.1.83' rm -Rf obj rm -Rf bin make[1]: Leaving directory '/build/yaha-0.1.83' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/yaha.substvars debian/files rm -fr -- debian/yaha/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/yaha-0.1.83' mkdir -p obj mkdir -p bin cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/Main.c -o obj/Main.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/AlignArgs.c -o obj/AlignArgs.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/AlignHelpers.c -o obj/AlignHelpers.o src/Main.c: In function 'main': src/Main.c:640:54: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'long int' [-Wformat=] 640 | fprintf(stderr, "Number of non-IO page faults: %zd, Number of IO page faults: %zd.\n", usagebuf.ru_minflt, usagebuf.ru_majflt); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld src/Main.c:640:85: warning: format '%zd' expects argument of type 'signed size_t', but argument 4 has type 'long int' [-Wformat=] 640 | fprintf(stderr, "Number of non-IO page faults: %zd, Number of IO page faults: %zd.\n", usagebuf.ru_minflt, usagebuf.ru_majflt); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld g++ -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -Wdate-time -D_FORTIFY_SOURCE=2 -c src/AlignExtFrag.cpp -o obj/AlignExtFrag.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/AlignOutput.c -o obj/AlignOutput.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/BaseSeq.c -o obj/BaseSeq.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/Compress.c -o obj/Compress.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/FileHelpers.c -o obj/FileHelpers.o g++ -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -Wdate-time -D_FORTIFY_SOURCE=2 -c src/GraphPath.cpp -o obj/GraphPath.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/Index.c -o obj/Index.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/Query.c -o obj/Query.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/QueryMatch.c -o obj/QueryMatch.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/QueryState.c -o obj/QueryState.o g++ -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -Wdate-time -D_FORTIFY_SOURCE=2 -c src/SW.cpp -o obj/SW.o cc -g -O2 -ffile-prefix-map=/build/yaha-0.1.83=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -Wdate-time -D_FORTIFY_SOURCE=2 -c src/Math.c -o obj/Math.o src/SW.cpp:799:5: warning: redeclaration of 'template int findAffineGapScore(QueryState_t*, char*, SUINT, char*, SUINT, EditOpList_t*, SUINT*, SUINT*)' may not have default arguments [-fpermissive] 799 | int findAffineGapScore(QueryState_t * QS, char * qStr, SUINT qLen, char * rStr, SUINT rLen, EditOpList_t * list, SUINT * addedQLen = NULL, SUINT * addedRLen = NULL) | ^~~~~~~~~~~~~~~~~~ g++ -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -pthread -o bin/yaha obj/Main.o obj/AlignArgs.o obj/AlignHelpers.o obj/AlignExtFrag.o obj/AlignOutput.o obj/BaseSeq.o obj/Compress.o obj/FileHelpers.o obj/GraphPath.o obj/Index.o obj/Query.o obj/QueryMatch.o obj/QueryState.o obj/SW.o obj/Math.o make[1]: Leaving directory '/build/yaha-0.1.83' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-_wuyIAuw create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/yaha.substvars rm -fr -- debian/.debhelper/generated/yaha/ debian/yaha/ debian/tmp/ dh_auto_install --destdir=debian/yaha/ install -m0755 -d /build/yaha-0.1.83/debian/yaha dh_install install -m0755 -d debian/yaha/usr/bin cp --reflink=auto -a ./bin/yaha debian/yaha/usr/bin/ dh_installdocs install -m0755 -d debian/yaha/usr/share/doc/yaha install -p -m0644 debian/copyright debian/yaha/usr/share/doc/yaha/copyright dh_installchangelogs install -m0755 -d debian/yaha/usr/share/doc/yaha install -p -m0644 debian/.debhelper/generated/yaha/dh_installchangelogs.dch.trimmed debian/yaha/usr/share/doc/yaha/changelog.Debian dh_installman install -m0755 -d debian/yaha/usr/share/man/man1/ install -p -m0644 ./debian/yaha.1 debian/yaha/usr/share/man/man1/yaha.1 man-recode --to-code UTF-8 --suffix .dh-new debian/yaha/usr/share/man/man1/yaha.1 mv debian/yaha/usr/share/man/man1/yaha.1.dh-new debian/yaha/usr/share/man/man1/yaha.1 chmod 0644 -- debian/yaha/usr/share/man/man1/yaha.1 dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/yaha chmod a-x usr/share/doc/yaha/changelog.Debian usr/share/man/man1/yaha.1 gzip -9nf usr/share/doc/yaha/changelog.Debian usr/share/man/man1/yaha.1 cd '/build/yaha-0.1.83' dh_fixperms find debian/yaha ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/yaha/usr/share/doc -type f -a -true -a ! -regex 'debian/yaha/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/yaha/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/yaha/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/yaha -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/yaha/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/yaha/usr/bin/yaha dh_strip -a install -m0755 -d debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/yaha/usr/bin/yaha debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/d2/2c3e268b2b37b8e768110c484f19048f72955b.debug chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/d2/2c3e268b2b37b8e768110c484f19048f72955b.debug strip --remove-section=.comment --remove-section=.note debian/yaha/usr/bin/yaha objcopy --add-gnu-debuglink debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/d2/2c3e268b2b37b8e768110c484f19048f72955b.debug debian/yaha/usr/bin/yaha install -m0755 -d debian/.debhelper/yaha/dbgsym-root/usr/share/doc ln -s yaha debian/.debhelper/yaha/dbgsym-root/usr/share/doc/yaha-dbgsym install -m0755 -d debian/.debhelper/yaha dh_makeshlibs -a rm -f debian/yaha/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/yaha/DEBIAN dpkg-shlibdeps -Tdebian/yaha.substvars debian/yaha/usr/bin/yaha dh_installdeb install -m0755 -d debian/yaha/DEBIAN dh_gencontrol install -m0755 -d debian/yaha/DEBIAN echo misc:Depends= >> debian/yaha.substvars echo misc:Pre-Depends= >> debian/yaha.substvars install -m0755 -d debian/.debhelper/yaha/dbgsym-root/DEBIAN dpkg-gencontrol -pyaha -ldebian/changelog -Tdebian/yaha.substvars -Pdebian/.debhelper/yaha/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=yaha-dbgsym "-DDepends=yaha (= \${binary:Version})" "-DDescription=debug symbols for yaha" -DBuild-Ids=d22c3e268b2b37b8e768110c484f19048f72955b -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/DEBIAN/control dpkg-gencontrol -pyaha -ldebian/changelog -Tdebian/yaha.substvars -Pdebian/yaha chmod 0644 -- debian/yaha/DEBIAN/control dh_md5sums install -m0755 -d debian/yaha/DEBIAN cd debian/yaha >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/yaha/DEBIAN/md5sums install -m0755 -d debian/.debhelper/yaha/dbgsym-root/DEBIAN cd debian/.debhelper/yaha/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/yaha .. dpkg-deb --root-owner-group --build debian/.debhelper/yaha/dbgsym-root .. dpkg-deb: building package 'yaha' in '../yaha_0.1.83-3_armhf.deb'. dpkg-deb: building package 'yaha-dbgsym' in '../yaha-dbgsym_0.1.83-3_armhf.deb'. dpkg-genbuildinfo --build=binary -O../yaha_0.1.83-3_armhf.buildinfo dpkg-genchanges --build=binary -O../yaha_0.1.83-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/9536 and its subdirectories I: Current time: Mon May 8 09:59:45 -12 2023 I: pbuilder-time-stamp: 1683583185 Mon May 8 21:59:53 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Mon May 8 21:59:53 UTC 2023 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Mon May 8 22:10:21 UTC 2023 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Mon May 8 22:10:24 UTC 2023 I: yaha_0.1.83-3_armhf.changes: Format: 1.8 Date: Sun, 15 Aug 2021 22:51:41 +0530 Source: yaha Binary: yaha yaha-dbgsym Architecture: armhf Version: 0.1.83-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Shruti Sridhar Description: yaha - find split-read mappings on single-end queries Changes: yaha (0.1.83-3) unstable; urgency=medium . [ Shruti Sridhar ] * Team upload * Add autopkgtests * Install README as docs . [ Nilesh Patra ] * Add CPPFLAGS for hardening * Declare compliance with policy 4.5.1 Checksums-Sha1: 015e4f6544b37a52cc3bf0c8fbac75cfc1908b06 166392 yaha-dbgsym_0.1.83-3_armhf.deb 63a4b8a5d1d41c926c880b20435ac257b231ceed 4935 yaha_0.1.83-3_armhf.buildinfo b1974fccadc1622a6484945df86261e32cd74681 37012 yaha_0.1.83-3_armhf.deb Checksums-Sha256: e536d512e3dfc41410e5a5d5e671a4df4500d8ee4c55b9414c0f8f144a190d31 166392 yaha-dbgsym_0.1.83-3_armhf.deb 1a9a80fcf2a4c52e310cddb078d156c822fbcada2f9f75998c862db0bb9079e0 4935 yaha_0.1.83-3_armhf.buildinfo 0d7a3b81f516f298b3b8993537d65cb1b730fd194934c3dc02fb9cc5fc3ad946 37012 yaha_0.1.83-3_armhf.deb Files: 76f62e989a85df0d4b7554e09aa3577d 166392 debug optional yaha-dbgsym_0.1.83-3_armhf.deb c34c641d0d0462635adff3b9eab809c7 4935 science optional yaha_0.1.83-3_armhf.buildinfo 955f690b5d9deebcde5933f152b53132 37012 science optional yaha_0.1.83-3_armhf.deb Mon May 8 22:10:25 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/yaha_0.1.83-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/yaha_0.1.83-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/yaha_0.1.83-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/b1/yaha_0.1.83-3_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.YlAmCwS9/b2/yaha_0.1.83-3_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.588s) 0.588s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.021s) 0.021s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 8 22:11:03 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 8 22:11:03 UTC 2023 I: yaha from bookworm built successfully and reproducibly on armhf. Mon May 8 22:11:05 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 8 22:11:05 UTC 2023 I: Submitting 8.0K b1/yaha_0.1.83-3_armhf.buildinfo.asc Mon May 8 22:11:06 UTC 2023 I: Submitting 8.0K b2/yaha_0.1.83-3_armhf.buildinfo.asc Mon May 8 22:11:08 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 8 22:11:08 UTC 2023 I: Done submitting .buildinfo files. Mon May 8 22:11:08 UTC 2023 I: Removing signed yaha_0.1.83-3_armhf.buildinfo.asc files: removed './b1/yaha_0.1.83-3_armhf.buildinfo.asc' removed './b2/yaha_0.1.83-3_armhf.buildinfo.asc'