Sun May 14 12:43:50 UTC 2023 I: starting to build sim4/bookworm/armhf on jenkins on '2023-05-14 12:43' Sun May 14 12:43:50 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_35/1861/console.log Sun May 14 12:43:50 UTC 2023 I: Downloading source for bookworm/sim4=0.0.20121010-8 --2023-05-14 12:43:51-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/sim4/sim4_0.0.20121010-8.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1978 (1.9K) [text/prs.lines.tag] Saving to: ‘sim4_0.0.20121010-8.dsc’ 0K . 100% 182M=0s 2023-05-14 12:43:51 (182 MB/s) - ‘sim4_0.0.20121010-8.dsc’ saved [1978/1978] Sun May 14 12:43:51 UTC 2023 I: sim4_0.0.20121010-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sim4 Binary: sim4 Architecture: any Version: 0.0.20121010-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://globin.bx.psu.edu/html/docs/sim4.html Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/sim4 Vcs-Git: https://salsa.debian.org/med-team/sim4.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: sim4 deb science optional arch=any Checksums-Sha1: af09413d4f79f2f6f642c26f1084a9403c3a3257 61240 sim4_0.0.20121010.orig.tar.gz 5325071e56f291a76203f9289657132845a29dcd 315540 sim4_0.0.20121010-8.debian.tar.xz Checksums-Sha256: d2132f61e47f2de5e35d0b48a0f697ae79ece3e8b91177eae2dfe47bda97b4a5 61240 sim4_0.0.20121010.orig.tar.gz 76a0f331358cd01fb7d93107678dbeb066cf2e7e60419d946624909f1d50a94a 315540 sim4_0.0.20121010-8.debian.tar.xz Files: 8bca6eb05c5aaf689db0db12522bdf34 61240 sim4_0.0.20121010.orig.tar.gz f5ef5efa2b5354ec7d06144d5a4cb246 315540 sim4_0.0.20121010-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/KS6MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHjsw//Z2CkFUGn/Bb7PswKylgSLYeaQie3R7xD iyOs31xwhEz61rYb5nBVKKzUR+dLAsTmITFxozCMo1NkrF1lNVExdI2mzKh5u6Bv Xrt5gwSm0f/Im1I5adfTiYKzJTpWNr1AiNyDFGC9S7uT1PHK9hBBOBc2fpKgllzW Y+PrmuwrfMUbYqOh2ftnxIwCu4MkgxSZkpMdrieylQE9X+qF3vABH+j6mkmh7z6W UVWsIiZI9TFEBldyM7JJNCZCeeHwk0dy2DQa+X+PtaeAX0hMknlcmZ6ISHy97JXj xMMfMJUg+w7VefGRMM4tMXp35SjvT01PguJxcfi2HrKFCBMY6ggxVrN5V989uy9g k3fzmZIbHqD7yjQG8W33JCfa4LxCbVjGw+BJjRDGwhKzV7Y1hAESqTFLV9sijVI1 fJIFx2XJhO36EMR1g6hNRDJQFtEIS8Pfo9JGzqiAADF6JPRzx9mEfIe13J0rl/87 6iqO15kQYEoAGhu6adifhYUd2PYImKytIoSbhgDy/014zS2JZ760lx7NkPG2dPKy NaU2KNWV3yWMPp0VHHI11fQh0uCBckWJ5i9W4Cw59sQ11o3xNLbf+TtmjIRlOAXI 2K7zJQA1O9WoJBjVcHQY1+9PEjmiWWLtWbuBblF1gcDKKzBWbkBFpMVS4GgxgL5v cBfAiZt/ZOk= =yLLo -----END PGP SIGNATURE----- Sun May 14 12:43:51 UTC 2023 I: Checking whether the package is not for us Sun May 14 12:43:51 UTC 2023 I: Starting 1st build on remote node jtx1c-armhf-rb.debian.net. Sun May 14 12:43:51 UTC 2023 I: Preparing to do remote build '1' on jtx1c-armhf-rb.debian.net. Sun May 14 12:44:54 UTC 2023 I: Deleting $TMPDIR on jtx1c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun May 14 00:43:57 -12 2023 I: pbuilder-time-stamp: 1684068237 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [sim4_0.0.20121010-8.dsc] I: copying [./sim4_0.0.20121010.orig.tar.gz] I: copying [./sim4_0.0.20121010-8.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Dec 4 02:45:55 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./sim4_0.0.20121010-8.dsc: no acceptable signature found dpkg-source: info: extracting sim4 in sim4-0.0.20121010 dpkg-source: info: unpacking sim4_0.0.20121010.orig.tar.gz dpkg-source: info: unpacking sim4_0.0.20121010-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying compilation_order.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/14767/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='14c2641bdec04bef89a2300786075064' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='14767' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/pbuilderrc_FxUU --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/b1 --logfile b1/build.log sim4_0.0.20121010-8.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux jtx1c 5.10.0-23-arm64 #1 SMP Debian 5.10.179-1 (2023-05-12) aarch64 GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/14767/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After unpacking 67.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Fetched 18.0 MB in 2s (11.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/sim4-0.0.20121010/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../sim4_0.0.20121010-8_source.changes dpkg-buildpackage: info: source package sim4 dpkg-buildpackage: info: source version 0.0.20121010-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/sim4-0.0.20121010' rm -f sim4 *.o make[1]: Leaving directory '/build/sim4-0.0.20121010' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/sim4-0.0.20121010' cc -o sim4 -I. -g -O2 -ffile-prefix-map=/build/sim4-0.0.20121010=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -Wall `LC_ALL=C ls *.c` -lm -Wl,-z,relro Xtend1.c:12:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 12 | static const char rcsid[] = | ^~~~~ align.c:13:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 13 | static const char rcsid[] = | ^~~~~ align.c: In function 'align_path': align.c:250:13: warning: 'head2' may be used uninitialized [-Wmaybe-uninitialized] 250 | if (head2) *tail = tail2; | ^~~~~ align.c:27:38: note: 'head2' declared here 27 | edit_script *head1, *tail1, *head2, *tail2; | ^~~~~ args.c:7:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 7 | static const char rcsid[] = | ^~~~~ discrim.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ dna.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ encoding.c:52:20: warning: 'osx_linker_bug' defined but not used [-Wunused-variable] 52 | static const char *osx_linker_bug = ""; | ^~~~~~~~~~~~~~ encoding.c:3:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 3 | static const char rcsid[] = | ^~~~~ misc.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ poly.c: In function 'remove_polyA_back': poly.c:108:29: warning: variable 'prev' set but not used [-Wunused-but-set-variable] 108 | Exon *t, *exons_tail, *prev; /* start from Lblock */ | ^~~~ poly.c: At top level: poly.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = "$Id: poly.c,v 1.5 2002/03/03 23:29:48 florea Exp $"; | ^~~~~ prnt.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ seq.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ seq_read.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ sim4.init.c: In function 'cds_range': sim4.init.c:672:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:672:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c:673:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:673:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c: At top level: sim4.init.c:61:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 61 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function 'find_ends': sim4b1.c:1523:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~ sim4b1.c:1523:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~~~~ sim4b1.c: At top level: sim4b1.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function 'print_pipmaker_exons': sim4b1.c:1386:11: warning: 'To' may be used uninitialized [-Wmaybe-uninitialized] 1386 | printf("+ %d %d\n", From, To); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c:1307:14: note: 'To' was declared here 1307 | int From, To, cov, ori; | ^~ sim4b1.c:1386:11: warning: 'From' may be used uninitialized [-Wmaybe-uninitialized] 1386 | printf("+ %d %d\n", From, To); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c:1307:8: note: 'From' was declared here 1307 | int From, To, cov, ori; | ^~~~ splice.c: In function 'splice': splice.c:45:67: warning: variable 'keep_Gi' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c:45:58: warning: variable 'keep_Ci' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c: At top level: splice.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ make[1]: Leaving directory '/build/sim4-0.0.20121010' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/sim4/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sim4' in '../sim4_0.0.20121010-8_armhf.deb'. dpkg-deb: building package 'sim4-dbgsym' in '../sim4-dbgsym_0.0.20121010-8_armhf.deb'. dpkg-genbuildinfo --build=binary -O../sim4_0.0.20121010-8_armhf.buildinfo dpkg-genchanges --build=binary -O../sim4_0.0.20121010-8_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/14767 and its subdirectories I: Current time: Sun May 14 00:44:49 -12 2023 I: pbuilder-time-stamp: 1684068289 Sun May 14 12:44:56 UTC 2023 I: 1st build successful. Starting 2nd build on remote node virt32c-armhf-rb.debian.net. Sun May 14 12:44:56 UTC 2023 I: Preparing to do remote build '2' on virt32c-armhf-rb.debian.net. Sun May 14 12:46:19 UTC 2023 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. Sun May 14 12:46:21 UTC 2023 I: sim4_0.0.20121010-8_armhf.changes: Format: 1.8 Date: Fri, 04 Dec 2020 15:29:21 +0100 Source: sim4 Binary: sim4 sim4-dbgsym Architecture: armhf Version: 0.0.20121010-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sim4 - tool for aligning cDNA and genomic DNA Closes: 962117 Changes: sim4 (0.0.20121010-8) unstable; urgency=medium . * Nelson A. de Oliveira has retired so remove him from Uploaders (thanks Nelson for your work on this package) Closes: #962117 Checksums-Sha1: 974b383a15cacccd58d737c7310642f0124b136a 106280 sim4-dbgsym_0.0.20121010-8_armhf.deb 869ebb86f9c51285790cb7f31205058182057948 4986 sim4_0.0.20121010-8_armhf.buildinfo e8d2bd774a8ea4f35bc866d4b4e4d5a183138047 352184 sim4_0.0.20121010-8_armhf.deb Checksums-Sha256: b52d453ba50eb3db0d95f3bec9f138090e1269af95000591a4f000edcda286db 106280 sim4-dbgsym_0.0.20121010-8_armhf.deb ade8e29432b261a0a44e1d6019d0ba60c07bc2a638afca848d2c3b2fe22ed477 4986 sim4_0.0.20121010-8_armhf.buildinfo ea973077f6d9ff857566fdef0e8f7610b1642835a040d46d48a840207f1b4d6c 352184 sim4_0.0.20121010-8_armhf.deb Files: fc2c48db9efc0b672d470d31bbe2c1e9 106280 debug optional sim4-dbgsym_0.0.20121010-8_armhf.deb 935da51e4fbf5656eaffb5401ac37d46 4986 science optional sim4_0.0.20121010-8_armhf.buildinfo cdfc5973248848c0b25536f9cc1a88c0 352184 science optional sim4_0.0.20121010-8_armhf.deb Sun May 14 12:46:22 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/sim4_0.0.20121010-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/sim4_0.0.20121010-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/sim4_0.0.20121010-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/b1/sim4_0.0.20121010-8_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.33niFI1A/b2/sim4_0.0.20121010-8_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.318s) 0.318s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sun May 14 12:46:23 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sun May 14 12:46:23 UTC 2023 I: sim4 from bookworm built successfully and reproducibly on armhf. Sun May 14 12:46:26 UTC 2023 I: Submitting .buildinfo files to external archives: Sun May 14 12:46:26 UTC 2023 I: Submitting 8.0K b1/sim4_0.0.20121010-8_armhf.buildinfo.asc Sun May 14 12:46:27 UTC 2023 I: Submitting 8.0K b2/sim4_0.0.20121010-8_armhf.buildinfo.asc Sun May 14 12:46:28 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 14 12:46:28 UTC 2023 I: Done submitting .buildinfo files. Sun May 14 12:46:28 UTC 2023 I: Removing signed sim4_0.0.20121010-8_armhf.buildinfo.asc files: removed './b1/sim4_0.0.20121010-8_armhf.buildinfo.asc' removed './b2/sim4_0.0.20121010-8_armhf.buildinfo.asc'