Sun May 7 02:58:08 UTC 2023 I: starting to build norsp/bookworm/armhf on jenkins on '2023-05-07 02:57' Sun May 7 02:58:08 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_9/8057/console.log Sun May 7 02:58:08 UTC 2023 I: Downloading source for bookworm/norsp=1.0.6-7 --2023-05-07 02:58:08-- http://cdn-fastly.deb.debian.org/debian/pool/main/n/norsp/norsp_1.0.6-7.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2063 (2.0K) [text/prs.lines.tag] Saving to: ‘norsp_1.0.6-7.dsc’ 0K .. 100% 9.65M=0s 2023-05-07 02:58:08 (9.65 MB/s) - ‘norsp_1.0.6-7.dsc’ saved [2063/2063] Sun May 7 02:58:08 UTC 2023 I: norsp_1.0.6-7.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: norsp Binary: norsp Architecture: all Version: 1.0.6-7 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Eva Reisinger , Andreas Tille Homepage: https://rostlab.org/owiki/index.php/NORSp_-_predictor_of_NOn-Regular_Secondary_Structure Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/norsp Vcs-Git: https://salsa.debian.org/med-team/norsp.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), debhelper Package-List: norsp deb science optional arch=all Checksums-Sha1: 34b229266051983c3f69b5666bc8ec18c647e03f 460976 norsp_1.0.6.orig.tar.gz b3067ac7e8ea483f4d784b791127a446b01b1c53 5324 norsp_1.0.6-7.debian.tar.xz Checksums-Sha256: 2f654e5b11b4191942a58ff69837cb8a77fc0417b48d40b76904a7e29863d809 460976 norsp_1.0.6.orig.tar.gz 8c15b0773621e3378f9f26a23e2f05ca7382d474d07c2af6e33c775f80786f06 5324 norsp_1.0.6-7.debian.tar.xz Files: f21b74fbf83c57cbedf7cd7b5b21959a 460976 norsp_1.0.6.orig.tar.gz 8237cd330447e7ad3742245b6e8b8bd0 5324 norsp_1.0.6-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHnI7kRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEOHg/+Om8T4dUm8J3oFleYyyFQpfnafFAIKc1+ UbRwB6z307X0KijGI/Hkkq8zMbCS9z/tpAEXx+1U0i3fTKSjNqEGR+lK1bRh6NAS 5tox6Uv2UNEULGUvivlG0UCozQhfIL1krsR5PivpzGkcOcrBQ+zZ4J0ilt0GA69w iczFYznueawmcg1NyY7bmswss1bJl3FZnUah3RXMJsY8YF3CW2Ea3jev/kxWVHBQ zSOw8C5qkvDAeXDZCSTxs5NAIZju3YgwuzpesVwlCfMhd7KrRFE0y9CatL0P3m2Z c0zIsVl4rghJXaEG5T3sJSVMbiWtfjY4AmggaOP3auP4hzNTWH2hbmtL8YGC1n49 xCvljKBc1tn6FPNUOTbklBrhQZOhypJppyodYAQq2BgR4TD4r1dixxKa6aN0kYcZ IOzREpc1pkwDgPGEQyEwMmJm9WBEym61ygsDAk3kEf1W1PD9O9s9pkLuutj8k8HL UAzZFU96FWy1qRVbZFdFvx0Mq8nvYNTZkGx2y3dWyfU2bBorkJWq/qaSBga3s5Pz W6Zz7+6jPsx+MBSAK1UQSJajliu+FXJyWNuZhYwxItLq85VTc48I9aD5rtp2BZxM T5YSQtOdVcqwtU02kGmdY/YKmB4YZwSCUD/ltsdwh8DCT1ikQzn0uHxwlRKPK4s6 tfn4wIAqCcE= =8WoK -----END PGP SIGNATURE----- Sun May 7 02:58:08 UTC 2023 I: Checking whether the package is not for us Sun May 7 02:58:08 UTC 2023 I: Starting 1st build on remote node virt32a-armhf-rb.debian.net. Sun May 7 02:58:08 UTC 2023 I: Preparing to do remote build '1' on virt32a-armhf-rb.debian.net. Sun May 7 03:01:41 UTC 2023 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat May 6 14:58:14 -12 2023 I: pbuilder-time-stamp: 1683428294 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [norsp_1.0.6-7.dsc] I: copying [./norsp_1.0.6.orig.tar.gz] I: copying [./norsp_1.0.6-7.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 18 08:31:53 2022 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./norsp_1.0.6-7.dsc: no acceptable signature found dpkg-source: info: extracting norsp in norsp-1.0.6 dpkg-source: info: unpacking norsp_1.0.6.orig.tar.gz dpkg-source: info: unpacking norsp_1.0.6-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_pp_popcon_cnt.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32523/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='721c1bb5c4db4484a3772d2cc7ecbcef' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32523' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/pbuilderrc_DnXz --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/b1 --logfile b1/build.log norsp_1.0.6-7.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32a 5.10.0-22-armmp-lpae #1 SMP Debian 5.10.178-3 (2023-04-22) armv7l GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/32523/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After unpacking 67.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Fetched 18.0 MB in 1s (15.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/norsp-1.0.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../norsp_1.0.6-7_source.changes dpkg-buildpackage: info: source package norsp dpkg-buildpackage: info: source version 1.0.6-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf Makefile.am:9: warning: '%'-style pattern rules are a GNU make extension dh_auto_configure ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile dh_auto_build make -j3 make[1]: Entering directory '/build/norsp-1.0.6' sed -e 's|__docdir__|/usr/share/doc/norsp|g;s|__pkgdatadir__|/usr/share/norsp|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__VERSION__|1.0.6|g' "norsp" | \ pod2man -c 'User Commands' -r "1.0.6" -name NORSP > "norsp.1" make[1]: Leaving directory '/build/norsp-1.0.6' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/norsp/ make -j3 install DESTDIR=/build/norsp-1.0.6/debian/norsp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/norsp-1.0.6' make[2]: Entering directory '/build/norsp-1.0.6' mkdir -p '/build/norsp-1.0.6/debian/norsp/usr/share/doc/norsp' && cp -r '.'/examples '/build/norsp-1.0.6/debian/norsp/usr/share/doc/norsp/' /bin/mkdir -p '/build/norsp-1.0.6/debian/norsp/usr/bin' /bin/mkdir -p '/build/norsp-1.0.6/debian/norsp/usr/share/man/man1' rm -rf `find '/build/norsp-1.0.6/debian/norsp/usr/share/doc/norsp' -name .svn` /usr/bin/install -c norsp '/build/norsp-1.0.6/debian/norsp/usr/bin' chmod -R u+w '/build/norsp-1.0.6/debian/norsp/usr/share/doc/norsp' /usr/bin/install -c -m 644 norsp.1 '/build/norsp-1.0.6/debian/norsp/usr/share/man/man1' make install-exec-hook make[3]: Entering directory '/build/norsp-1.0.6' sed -i -e 's|__docdir__|/usr/share/doc/norsp|g;s|__pkgdatadir__|/usr/share/norsp|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.6|g;' "/build/norsp-1.0.6/debian/norsp/usr/bin/norsp" make[3]: Leaving directory '/build/norsp-1.0.6' make[2]: Leaving directory '/build/norsp-1.0.6' make[1]: Leaving directory '/build/norsp-1.0.6' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/norsp-1.0.6' dh_compress -Xexamples/query.fasta -Xexamples/query.hssp -Xexamples/query.prof -Xexamples/query.phdHtm -Xexamples/query.coils make[1]: Leaving directory '/build/norsp-1.0.6' dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'norsp' in '../norsp_1.0.6-7_all.deb'. dpkg-genbuildinfo --build=binary -O../norsp_1.0.6-7_armhf.buildinfo dpkg-genchanges --build=binary -O../norsp_1.0.6-7_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32523 and its subdirectories I: Current time: Sat May 6 15:01:36 -12 2023 I: pbuilder-time-stamp: 1683428496 Sun May 7 03:01:48 UTC 2023 I: 1st build successful. Starting 2nd build on remote node jtx1a-armhf-rb.debian.net. Sun May 7 03:01:48 UTC 2023 I: Preparing to do remote build '2' on jtx1a-armhf-rb.debian.net. Sun May 7 03:03:24 UTC 2023 I: Deleting $TMPDIR on jtx1a-armhf-rb.debian.net. Sun May 7 03:03:26 UTC 2023 I: norsp_1.0.6-7_armhf.changes: Format: 1.8 Date: Tue, 18 Jan 2022 21:30:20 +0100 Source: norsp Binary: norsp Architecture: all Version: 1.0.6-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: norsp - predictor of non-regular secondary structure Changes: norsp (1.0.6-7) unstable; urgency=medium . * Do not even suggest pp_popcon any more * Upstream download vanished * Standards-Version: 4.6.0 (routine-update) * Add missing build dependency on dh addon. * Apply multi-arch hints. + norsp: Add Multi-Arch: foreign. Checksums-Sha1: ca4aef09726c79356a3a18f3aef7f44e677e3b4d 278820 norsp_1.0.6-7_all.deb ce72dec5eaf18b1ca759dbf892afcf0fc62d5c38 4668 norsp_1.0.6-7_armhf.buildinfo Checksums-Sha256: ee3afefac74f1b6834fa6ec3709071d65f308c3ab168b9e3b14d37ec3df12e72 278820 norsp_1.0.6-7_all.deb 2b924aa143703c0450ede41f4a665cff1b330765e65842d389be46a0f52b457d 4668 norsp_1.0.6-7_armhf.buildinfo Files: 9c5796d509342d61409e4a69e8741827 278820 science optional norsp_1.0.6-7_all.deb fd1d310d7b46f025118b6ad1ffdaa0b6 4668 science optional norsp_1.0.6-7_armhf.buildinfo Sun May 7 03:03:27 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/norsp_1.0.6-7.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/norsp_1.0.6-7.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/norsp_1.0.6-7.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/b1/norsp_1.0.6-7_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.iHqL9hZw/b2/norsp_1.0.6-7_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.349s) 0.349s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.021s) 0.021s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.001s) 0.001s 1 call specialize Sun May 7 03:03:28 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sun May 7 03:03:28 UTC 2023 I: norsp from bookworm built successfully and reproducibly on armhf. Sun May 7 03:03:29 UTC 2023 I: Submitting .buildinfo files to external archives: Sun May 7 03:03:29 UTC 2023 I: Submitting 8.0K b1/norsp_1.0.6-7_armhf.buildinfo.asc Sun May 7 03:03:30 UTC 2023 I: Submitting 8.0K b2/norsp_1.0.6-7_armhf.buildinfo.asc Sun May 7 03:03:31 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 7 03:03:31 UTC 2023 I: Done submitting .buildinfo files. Sun May 7 03:03:31 UTC 2023 I: Removing signed norsp_1.0.6-7_armhf.buildinfo.asc files: removed './b1/norsp_1.0.6-7_armhf.buildinfo.asc' removed './b2/norsp_1.0.6-7_armhf.buildinfo.asc'