Fri May 12 02:23:33 UTC 2023 I: starting to build nanofilt/bookworm/armhf on jenkins on '2023-05-12 02:23' Fri May 12 02:23:33 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_10/1553/console.log Fri May 12 02:23:33 UTC 2023 I: Downloading source for bookworm/nanofilt=2.8.0-1 --2023-05-12 02:23:33-- http://cdn-fastly.deb.debian.org/debian/pool/main/n/nanofilt/nanofilt_2.8.0-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1439 (1.4K) [text/prs.lines.tag] Saving to: ‘nanofilt_2.8.0-1.dsc’ 0K . 100% 106M=0s 2023-05-12 02:23:34 (106 MB/s) - ‘nanofilt_2.8.0-1.dsc’ saved [1439/1439] Fri May 12 02:23:34 UTC 2023 I: nanofilt_2.8.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: nanofilt Binary: nanofilt Architecture: all Version: 2.8.0-1 Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust Homepage: https://github.com/wdecoster/nanofilt Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/nanofilt Vcs-Git: https://salsa.debian.org/med-team/nanofilt.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), python3-all, python3-setuptools, dh-python, python3-biopython, python3-pandas, python3-flake8 Package-List: nanofilt deb science optional arch=all Checksums-Sha1: 131c631296ac1415160d0eea0831f3b1cb451df8 19020 nanofilt_2.8.0.orig.tar.gz 21e012c79a0eb62e09de5363c79778e73865252d 63923836 nanofilt_2.8.0-1.debian.tar.xz Checksums-Sha256: 4902328b318ace04f726c58d62ce5edeb3c1c35f7b2f316dee492d07baad8fd0 19020 nanofilt_2.8.0.orig.tar.gz b1f512e080d8872d4bea21b8737f2b274825b6d8e7efc4d7bb542da6ca184045 63923836 nanofilt_2.8.0-1.debian.tar.xz Files: 954d798ff9d9f8cbcbc68e900f3db6f8 19020 nanofilt_2.8.0.orig.tar.gz 7ed05075298c8a848d121f882da2c911 63923836 nanofilt_2.8.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCY7ArMQAKCRAqJ5BL1yQ+ 2oKaAP4xj6o/TTuUmiRbrCHr+urCfBPKnS28EEB5ERfkBvCVugEApgd/fH9iF11F YiqeTro1mqEfC0FenbzSTXdVdoJVmgE= =HCUb -----END PGP SIGNATURE----- Fri May 12 02:23:34 UTC 2023 I: Checking whether the package is not for us Fri May 12 02:23:34 UTC 2023 I: Starting 1st build on remote node jtx1b-armhf-rb.debian.net. Fri May 12 02:23:34 UTC 2023 I: Preparing to do remote build '1' on jtx1b-armhf-rb.debian.net. Fri May 12 02:31:36 UTC 2023 I: Deleting $TMPDIR on jtx1b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 11 14:23:47 -12 2023 I: pbuilder-time-stamp: 1683858227 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [nanofilt_2.8.0-1.dsc] I: copying [./nanofilt_2.8.0.orig.tar.gz] I: copying [./nanofilt_2.8.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 31 00:29:37 2022 -12 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./nanofilt_2.8.0-1.dsc: no acceptable signature found dpkg-source: info: extracting nanofilt in nanofilt-2.8.0 dpkg-source: info: unpacking nanofilt_2.8.0.orig.tar.gz dpkg-source: info: unpacking nanofilt_2.8.0-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/22645/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='fab684a148644b71832355e9820c892d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='22645' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/pbuilderrc_Qjrz --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/b1 --logfile b1/build.log nanofilt_2.8.0-1.dsc' SUDO_GID='114' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux jtx1b 5.10.0-22-arm64 #1 SMP Debian 5.10.178-3 (2023-04-22) aarch64 GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/22645/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), python3-all, python3-setuptools, dh-python, python3-biopython, python3-pandas, python3-flake8 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-flake8; however: Package python3-flake8 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1{a} libopenjp2-7{a} libpipeline1{a} libpng16-16{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libraqm0{a} libreadline8{a} libsub-override-perl{a} libtiff6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} po-debconf{a} python3{a} python3-all{a} python3-biopython{a} python3-dateutil{a} python3-distutils{a} python3-flake8{a} python3-lib2to3{a} python3-mccabe{a} python3-minimal{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pkg-resources{a} python3-pycodestyle{a} python3-pyflakes{a} python3-renderpm{a} python3-reportlab{a} python3-reportlab-accel{a} python3-setuptools{a} python3-six{a} python3-tz{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ pyflakes3 python-biopython-doc python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-scipy python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 98 newly installed, 0 to remove and 0 not upgraded. Need to get 57.5 MB of archives. After unpacking 201 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf libpython3.11-minimal armhf 3.11.2-6 [798 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libexpat1 armhf 2.5.0-1 [79.9 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf python3.11-minimal armhf 3.11.2-6 [1714 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf python3-minimal armhf 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf mailcap all 3.70+nmu1 [32.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf mime-support all 3.66 [10.9 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf readline-common all 8.2-1.3 [69.0 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libreadline8 armhf 8.2-1.3 [144 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf libpython3.11-stdlib armhf 3.11.2-6 [1678 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf python3.11 armhf 3.11.2-6 [572 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf libpython3-stdlib armhf 3.11.2-1+b1 [9296 B] Get: 13 http://deb.debian.org/debian bookworm/main armhf python3 armhf 3.11.2-1+b1 [26.3 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf sgml-base all 1.31 [15.4 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 21 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 23 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 31 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 32 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 35 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 36 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 37 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 38 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 39 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 40 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 41 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 42 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 43 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 44 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Get: 45 http://deb.debian.org/debian bookworm/main armhf python3-lib2to3 all 3.11.2-3 [76.3 kB] Get: 46 http://deb.debian.org/debian bookworm/main armhf python3-distutils all 3.11.2-3 [131 kB] Get: 47 http://deb.debian.org/debian bookworm/main armhf dh-python all 5.20230130 [104 kB] Get: 48 http://deb.debian.org/debian bookworm/main armhf libfontenc1 armhf 1:1.1.4-1 [21.9 kB] Get: 49 http://deb.debian.org/debian bookworm/main armhf libbrotli1 armhf 1.0.9-2+b6 [271 kB] Get: 50 http://deb.debian.org/debian bookworm/main armhf libpng16-16 armhf 1.6.39-2 [260 kB] Get: 51 http://deb.debian.org/debian bookworm/main armhf libfreetype6 armhf 2.12.1+dfsg-5 [332 kB] Get: 52 http://deb.debian.org/debian bookworm/main armhf x11-common all 1:7.7+23 [252 kB] Get: 53 http://deb.debian.org/debian bookworm/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 54 http://deb.debian.org/debian bookworm/main armhf xfonts-utils armhf 1:7.7+6 [84.5 kB] Get: 55 http://deb.debian.org/debian bookworm/main armhf fonts-urw-base35 all 20200910-7 [10.8 MB] Get: 56 http://deb.debian.org/debian bookworm/main armhf libblas3 armhf 3.11.0-2 [105 kB] Get: 57 http://deb.debian.org/debian bookworm/main armhf libbsd0 armhf 0.11.7-2 [113 kB] Get: 58 http://deb.debian.org/debian bookworm/main armhf libdeflate0 armhf 1.14-1 [52.2 kB] Get: 59 http://deb.debian.org/debian bookworm/main armhf libfribidi0 armhf 1.0.8-2.1 [63.1 kB] Get: 60 http://deb.debian.org/debian bookworm/main armhf libgfortran5 armhf 12.2.0-14 [246 kB] Get: 61 http://deb.debian.org/debian bookworm/main armhf libglib2.0-0 armhf 2.74.6-2 [1227 kB] Get: 62 http://deb.debian.org/debian bookworm/main armhf libgraphite2-3 armhf 1.3.14-1 [70.5 kB] Get: 63 http://deb.debian.org/debian bookworm/main armhf libharfbuzz0b armhf 6.0.0+dfsg-3 [1893 kB] Get: 64 http://deb.debian.org/debian bookworm/main armhf libimagequant0 armhf 2.17.0-1 [27.9 kB] Get: 65 http://deb.debian.org/debian bookworm/main armhf libjbig0 armhf 2.1-6.1 [27.1 kB] Get: 66 http://deb.debian.org/debian bookworm/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB] Get: 67 http://deb.debian.org/debian bookworm/main armhf liblapack3 armhf 3.11.0-2 [1724 kB] Get: 68 http://deb.debian.org/debian bookworm/main armhf liblcms2-2 armhf 2.14-2 [125 kB] Get: 69 http://deb.debian.org/debian bookworm/main armhf liblerc4 armhf 4.0.0+ds-2 [137 kB] Get: 70 http://deb.debian.org/debian bookworm/main armhf libopenjp2-7 armhf 2.5.0-1+b1 [170 kB] Get: 71 http://deb.debian.org/debian bookworm/main armhf libraqm0 armhf 0.7.0-4.1 [9116 B] Get: 72 http://deb.debian.org/debian bookworm/main armhf libwebp7 armhf 1.2.4-0.1 [242 kB] Get: 73 http://deb.debian.org/debian bookworm/main armhf libtiff6 armhf 4.5.0-5 [295 kB] Get: 74 http://deb.debian.org/debian bookworm/main armhf libwebpdemux2 armhf 1.2.4-0.1 [98.2 kB] Get: 75 http://deb.debian.org/debian bookworm/main armhf libwebpmux3 armhf 1.2.4-0.1 [105 kB] Get: 76 http://deb.debian.org/debian bookworm/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 77 http://deb.debian.org/debian bookworm/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 78 http://deb.debian.org/debian bookworm/main armhf libxcb1 armhf 1.15-1 [140 kB] Get: 79 http://deb.debian.org/debian bookworm/main armhf python3-all armhf 3.11.2-1+b1 [1060 B] Get: 80 http://deb.debian.org/debian bookworm/main armhf python3-pkg-resources all 66.1.1-1 [296 kB] Get: 81 http://deb.debian.org/debian bookworm/main armhf python3-numpy armhf 1:1.24.2-1 [4165 kB] Get: 82 http://deb.debian.org/debian bookworm/main armhf python3-renderpm armhf 3.6.12-1+b1 [66.2 kB] Get: 83 http://deb.debian.org/debian bookworm/main armhf python3-reportlab-accel armhf 3.6.12-1+b1 [37.3 kB] Get: 84 http://deb.debian.org/debian bookworm/main armhf python3-pil armhf 9.4.0-1.1+b1 [438 kB] Get: 85 http://deb.debian.org/debian bookworm/main armhf python3-reportlab all 3.6.12-1 [564 kB] Get: 86 http://deb.debian.org/debian bookworm/main armhf xml-core all 0.18+nmu1 [23.8 kB] Get: 87 http://deb.debian.org/debian bookworm/main armhf w3c-sgml-lib all 1.3-3 [273 kB] Get: 88 http://deb.debian.org/debian bookworm/main armhf python3-biopython armhf 1.80+dfsg-4+b1 [1568 kB] Get: 89 http://deb.debian.org/debian bookworm/main armhf python3-six all 1.16.0-4 [17.5 kB] Get: 90 http://deb.debian.org/debian bookworm/main armhf python3-dateutil all 2.8.2-2 [78.3 kB] Get: 91 http://deb.debian.org/debian bookworm/main armhf python3-mccabe all 0.7.0-1 [10.5 kB] Get: 92 http://deb.debian.org/debian bookworm/main armhf python3-pycodestyle all 2.10.0-1 [47.4 kB] Get: 93 http://deb.debian.org/debian bookworm/main armhf python3-pyflakes all 2.5.0-1 [62.9 kB] Get: 94 http://deb.debian.org/debian bookworm/main armhf python3-setuptools all 66.1.1-1 [521 kB] Get: 95 http://deb.debian.org/debian bookworm/main armhf python3-flake8 all 5.0.4-4 [58.9 kB] Get: 96 http://deb.debian.org/debian bookworm/main armhf python3-tz all 2022.7.1-3 [30.1 kB] Get: 97 http://deb.debian.org/debian bookworm/main armhf python3-pandas-lib armhf 1.5.3+dfsg-2 [3167 kB] Get: 98 http://deb.debian.org/debian bookworm/main armhf python3-pandas all 1.5.3+dfsg-2 [2885 kB] Fetched 57.5 MB in 5s (11.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.2-6) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.5.0-1_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_armhf.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:armhf (3.11.2-6) ... Setting up libexpat1:armhf (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19645 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_armhf.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../2-mailcap_3.70+nmu1_all.deb ... Unpacking mailcap (3.70+nmu1) ... Selecting previously unselected package mime-support. Preparing to unpack .../3-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../5-libreadline8_8.2-1.3_armhf.deb ... Unpacking libreadline8:armhf (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.2-6_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.2-6_armhf.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.2-1+b1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20103 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_armhf.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../01-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../04-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../21-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../24-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../26-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../27-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../32-python3-lib2to3_3.11.2-3_all.deb ... Unpacking python3-lib2to3 (3.11.2-3) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../33-python3-distutils_3.11.2-3_all.deb ... Unpacking python3-distutils (3.11.2-3) ... Selecting previously unselected package dh-python. Preparing to unpack .../34-dh-python_5.20230130_all.deb ... Unpacking dh-python (5.20230130) ... Selecting previously unselected package libfontenc1:armhf. Preparing to unpack .../35-libfontenc1_1%3a1.1.4-1_armhf.deb ... Unpacking libfontenc1:armhf (1:1.1.4-1) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../36-libbrotli1_1.0.9-2+b6_armhf.deb ... Unpacking libbrotli1:armhf (1.0.9-2+b6) ... Selecting previously unselected package libpng16-16:armhf. Preparing to unpack .../37-libpng16-16_1.6.39-2_armhf.deb ... Unpacking libpng16-16:armhf (1.6.39-2) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../38-libfreetype6_2.12.1+dfsg-5_armhf.deb ... Unpacking libfreetype6:armhf (2.12.1+dfsg-5) ... Selecting previously unselected package x11-common. Preparing to unpack .../39-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../40-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../41-xfonts-utils_1%3a7.7+6_armhf.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../42-fonts-urw-base35_20200910-7_all.deb ... Unpacking fonts-urw-base35 (20200910-7) ... Selecting previously unselected package libblas3:armhf. Preparing to unpack .../43-libblas3_3.11.0-2_armhf.deb ... Unpacking libblas3:armhf (3.11.0-2) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../44-libbsd0_0.11.7-2_armhf.deb ... Unpacking libbsd0:armhf (0.11.7-2) ... Selecting previously unselected package libdeflate0:armhf. Preparing to unpack .../45-libdeflate0_1.14-1_armhf.deb ... Unpacking libdeflate0:armhf (1.14-1) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../46-libfribidi0_1.0.8-2.1_armhf.deb ... Unpacking libfribidi0:armhf (1.0.8-2.1) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../47-libgfortran5_12.2.0-14_armhf.deb ... Unpacking libgfortran5:armhf (12.2.0-14) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../48-libglib2.0-0_2.74.6-2_armhf.deb ... Unpacking libglib2.0-0:armhf (2.74.6-2) ... Selecting previously unselected package libgraphite2-3:armhf. Preparing to unpack .../49-libgraphite2-3_1.3.14-1_armhf.deb ... Unpacking libgraphite2-3:armhf (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:armhf. Preparing to unpack .../50-libharfbuzz0b_6.0.0+dfsg-3_armhf.deb ... Unpacking libharfbuzz0b:armhf (6.0.0+dfsg-3) ... Selecting previously unselected package libimagequant0:armhf. Preparing to unpack .../51-libimagequant0_2.17.0-1_armhf.deb ... Unpacking libimagequant0:armhf (2.17.0-1) ... Selecting previously unselected package libjbig0:armhf. Preparing to unpack .../52-libjbig0_2.1-6.1_armhf.deb ... Unpacking libjbig0:armhf (2.1-6.1) ... Selecting previously unselected package libjpeg62-turbo:armhf. Preparing to unpack .../53-libjpeg62-turbo_1%3a2.1.5-2_armhf.deb ... Unpacking libjpeg62-turbo:armhf (1:2.1.5-2) ... Selecting previously unselected package liblapack3:armhf. Preparing to unpack .../54-liblapack3_3.11.0-2_armhf.deb ... Unpacking liblapack3:armhf (3.11.0-2) ... Selecting previously unselected package liblcms2-2:armhf. Preparing to unpack .../55-liblcms2-2_2.14-2_armhf.deb ... Unpacking liblcms2-2:armhf (2.14-2) ... Selecting previously unselected package liblerc4:armhf. Preparing to unpack .../56-liblerc4_4.0.0+ds-2_armhf.deb ... Unpacking liblerc4:armhf (4.0.0+ds-2) ... Selecting previously unselected package libopenjp2-7:armhf. Preparing to unpack .../57-libopenjp2-7_2.5.0-1+b1_armhf.deb ... Unpacking libopenjp2-7:armhf (2.5.0-1+b1) ... Selecting previously unselected package libraqm0:armhf. Preparing to unpack .../58-libraqm0_0.7.0-4.1_armhf.deb ... Unpacking libraqm0:armhf (0.7.0-4.1) ... Selecting previously unselected package libwebp7:armhf. Preparing to unpack .../59-libwebp7_1.2.4-0.1_armhf.deb ... Unpacking libwebp7:armhf (1.2.4-0.1) ... Selecting previously unselected package libtiff6:armhf. Preparing to unpack .../60-libtiff6_4.5.0-5_armhf.deb ... Unpacking libtiff6:armhf (4.5.0-5) ... Selecting previously unselected package libwebpdemux2:armhf. Preparing to unpack .../61-libwebpdemux2_1.2.4-0.1_armhf.deb ... Unpacking libwebpdemux2:armhf (1.2.4-0.1) ... Selecting previously unselected package libwebpmux3:armhf. Preparing to unpack .../62-libwebpmux3_1.2.4-0.1_armhf.deb ... Unpacking libwebpmux3:armhf (1.2.4-0.1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../63-libxau6_1%3a1.0.9-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.9-1) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../64-libxdmcp6_1%3a1.1.2-3_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../65-libxcb1_1.15-1_armhf.deb ... Unpacking libxcb1:armhf (1.15-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../66-python3-all_3.11.2-1+b1_armhf.deb ... Unpacking python3-all (3.11.2-1+b1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../67-python3-pkg-resources_66.1.1-1_all.deb ... Unpacking python3-pkg-resources (66.1.1-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../68-python3-numpy_1%3a1.24.2-1_armhf.deb ... Unpacking python3-numpy (1:1.24.2-1) ... Selecting previously unselected package python3-renderpm:armhf. Preparing to unpack .../69-python3-renderpm_3.6.12-1+b1_armhf.deb ... Unpacking python3-renderpm:armhf (3.6.12-1+b1) ... Selecting previously unselected package python3-reportlab-accel:armhf. Preparing to unpack .../70-python3-reportlab-accel_3.6.12-1+b1_armhf.deb ... Unpacking python3-reportlab-accel:armhf (3.6.12-1+b1) ... Selecting previously unselected package python3-pil:armhf. Preparing to unpack .../71-python3-pil_9.4.0-1.1+b1_armhf.deb ... Unpacking python3-pil:armhf (9.4.0-1.1+b1) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../72-python3-reportlab_3.6.12-1_all.deb ... Unpacking python3-reportlab (3.6.12-1) ... Selecting previously unselected package xml-core. Preparing to unpack .../73-xml-core_0.18+nmu1_all.deb ... Unpacking xml-core (0.18+nmu1) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../74-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../75-python3-biopython_1.80+dfsg-4+b1_armhf.deb ... Unpacking python3-biopython (1.80+dfsg-4+b1) ... Selecting previously unselected package python3-six. Preparing to unpack .../76-python3-six_1.16.0-4_all.deb ... Unpacking python3-six (1.16.0-4) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../77-python3-dateutil_2.8.2-2_all.deb ... Unpacking python3-dateutil (2.8.2-2) ... Selecting previously unselected package python3-mccabe. Preparing to unpack .../78-python3-mccabe_0.7.0-1_all.deb ... Unpacking python3-mccabe (0.7.0-1) ... Selecting previously unselected package python3-pycodestyle. Preparing to unpack .../79-python3-pycodestyle_2.10.0-1_all.deb ... Unpacking python3-pycodestyle (2.10.0-1) ... Selecting previously unselected package python3-pyflakes. Preparing to unpack .../80-python3-pyflakes_2.5.0-1_all.deb ... Unpacking python3-pyflakes (2.5.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../81-python3-setuptools_66.1.1-1_all.deb ... Unpacking python3-setuptools (66.1.1-1) ... Selecting previously unselected package python3-flake8. Preparing to unpack .../82-python3-flake8_5.0.4-4_all.deb ... Unpacking python3-flake8 (5.0.4-4) ... Selecting previously unselected package python3-tz. Preparing to unpack .../83-python3-tz_2022.7.1-3_all.deb ... Unpacking python3-tz (2022.7.1-3) ... Selecting previously unselected package python3-pandas-lib:armhf. Preparing to unpack .../84-python3-pandas-lib_1.5.3+dfsg-2_armhf.deb ... Unpacking python3-pandas-lib:armhf (1.5.3+dfsg-2) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../85-python3-pandas_1.5.3+dfsg-2_all.deb ... Unpacking python3-pandas (1.5.3+dfsg-2) ... Setting up media-types (10.0.0) ... Setting up libpipeline1:armhf (1.5.7-1) ... Setting up libgraphite2-3:armhf (1.3.14-1) ... Setting up liblcms2-2:armhf (2.14-2) ... Setting up libxau6:armhf (1:1.0.9-1) ... Setting up libicu72:armhf (72.1-3) ... Setting up liblerc4:armhf (4.0.0+ds-2) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.74.6-2) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:armhf (1.0.9-2+b6) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libmagic1:armhf (1:5.44-3) ... Setting up libdeflate0:armhf (1.14-1) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libjbig0:armhf (2.1-6.1) ... Setting up libfontenc1:armhf (1:1.1.4-1) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:armhf (3.11.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-2) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:armhf (1.0.8-2.1) ... Setting up libimagequant0:armhf (2.17.0-1) ... Setting up libpng16-16:armhf (1.6.39-2) ... Setting up autopoint (0.21-12) ... Setting up libgfortran5:armhf (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:armhf (1.2.4-0.1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:armhf (4.5.0-5) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libopenjp2-7:armhf (2.5.0-1+b1) ... Setting up libsub-override-perl (0.09-4) ... Setting up sgml-base (1.31) ... Setting up libwebpmux3:armhf (1.2.4-0.1) ... Setting up libbsd0:armhf (0.11.7-2) ... Setting up mailcap (3.70+nmu1) ... Setting up libelf1:armhf (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up liblapack3:armhf (3.11.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-12) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.7-5) ... Setting up libwebpdemux2:armhf (1.2.4-0.1) ... Setting up libreadline8:armhf (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libfreetype6:armhf (2.12.1+dfsg-5) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up xml-core (0.18+nmu1) ... Setting up libharfbuzz0b:armhf (6.0.0+dfsg-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.2-6) ... Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libraqm0:armhf (0.7.0-4.1) ... Setting up libpython3-stdlib:armhf (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up fonts-urw-base35 (20200910-7) ... Setting up python3-tz (2022.7.1-3) ... Setting up python3-six (1.16.0-4) ... Setting up python3-pil:armhf (9.4.0-1.1+b1) ... Setting up python3-pycodestyle (2.10.0-1) ... Setting up python3-reportlab-accel:armhf (3.6.12-1+b1) ... Setting up python3-reportlab (3.6.12-1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-mccabe (0.7.0-1) ... Setting up python3-lib2to3 (3.11.2-3) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-3) ... Setting up dh-python (5.20230130) ... Setting up python3-renderpm:armhf (3.6.12-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-pyflakes (2.5.0-1) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-flake8 (5.0.4-4) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-pandas-lib:armhf (1.5.3+dfsg-2) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.80+dfsg-4+b1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/nanofilt-2.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../nanofilt_2.8.0-1_source.changes dpkg-buildpackage: info: source package nanofilt dpkg-buildpackage: info: source version 2.8.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build' (and everything under it) 'build/bdist.linux-armhf' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt copying nanofilt/version.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt copying nanofilt/__init__.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt copying nanofilt/NanoFilt.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt copying nanofilt/utils.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt creating /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts copying scripts/timefilt.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts copying scripts/get_read_ends.py -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts running egg_info creating NanoFilt.egg-info writing NanoFilt.egg-info/PKG-INFO writing dependency_links to NanoFilt.egg-info/dependency_links.txt writing entry points to NanoFilt.egg-info/entry_points.txt writing requirements to NanoFilt.egg-info/requires.txt writing top-level names to NanoFilt.egg-info/top_level.txt writing manifest file 'NanoFilt.egg-info/SOURCES.txt' reading manifest file 'NanoFilt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'NanoFilt.egg-info/SOURCES.txt' copying scripts/test.sh -> /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts dh_auto_test -O--buildsystem=pybuild I: pybuild base:240: cd /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build; python3.11 -m unittest discover -v -k-pytest ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/nanofilt/ -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/nanofilt-2.8.0/debian/nanofilt --install-scripts=/usr/bin/ running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing NanoFilt.egg-info/PKG-INFO writing dependency_links to NanoFilt.egg-info/dependency_links.txt writing entry points to NanoFilt.egg-info/entry_points.txt writing requirements to NanoFilt.egg-info/requires.txt writing top-level names to NanoFilt.egg-info/top_level.txt reading manifest file 'NanoFilt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'NanoFilt.egg-info/SOURCES.txt' running install_lib creating /build/nanofilt-2.8.0/debian/nanofilt/usr creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11 creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/version.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/__init__.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/__pycache__ copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/__pycache__/version.cpython-311.pyc -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/__pycache__ copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/__pycache__/__init__.cpython-311.pyc -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/__pycache__ copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/NanoFilt.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/nanofilt/utils.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt creating /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts/timefilt.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts/test.sh -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts copying /build/nanofilt-2.8.0/.pybuild/cpython3_3.11/build/scripts/get_read_ends.py -> /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/version.py to version.cpython-311.pyc byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/__init__.py to __init__.cpython-311.pyc byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/NanoFilt.py to NanoFilt.cpython-311.pyc byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/nanofilt/utils.py to utils.cpython-311.pyc byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts/timefilt.py to timefilt.cpython-311.pyc byte-compiling /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/scripts/get_read_ends.py to get_read_ends.cpython-311.pyc running install_egg_info Copying NanoFilt.egg-info to /build/nanofilt-2.8.0/debian/nanofilt/usr/lib/python3.11/dist-packages/NanoFilt-2.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing NanoFilt script to /build/nanofilt-2.8.0/debian/nanofilt/usr/bin/ dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installexamples make[1]: Entering directory '/build/nanofilt-2.8.0' dh_installexamples find debian -name __pycache__ -type d | xargs rm -rf find debian/nanofilt/usr/lib/python* -name scripts -type d | xargs rm -rf make[1]: Leaving directory '/build/nanofilt-2.8.0' dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'nanofilt' in '../nanofilt_2.8.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../nanofilt_2.8.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../nanofilt_2.8.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/22645 and its subdirectories I: Current time: Thu May 11 14:27:44 -12 2023 I: pbuilder-time-stamp: 1683858464 Fri May 12 02:31:38 UTC 2023 I: 1st build successful. Starting 2nd build on remote node virt32a-armhf-rb.debian.net. Fri May 12 02:31:38 UTC 2023 I: Preparing to do remote build '2' on virt32a-armhf-rb.debian.net. Fri May 12 02:44:13 UTC 2023 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. Fri May 12 02:44:15 UTC 2023 I: nanofilt_2.8.0-1_armhf.changes: Format: 1.8 Date: Sat, 31 Dec 2022 17:54:16 +0530 Source: nanofilt Binary: nanofilt Architecture: all Version: 2.8.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: nanofilt - filtering and trimming of long read sequencing data Changes: nanofilt (2.8.0-1) unstable; urgency=medium . * Team Upload. * New upstream version 2.8.0 * Bump Standards-Version to 4.6.2 (no changes needed) Checksums-Sha1: c76977013ed0849940c98d58b727425cfcea6f2c 12428 nanofilt_2.8.0-1_all.deb 9b9601ed921a177f454ffae783dd85bfe1550a83 6764 nanofilt_2.8.0-1_armhf.buildinfo Checksums-Sha256: 3ca36c9f08ca3720a0bd97c0c5cc513fd61a19586562a9c15a09ce32f5773108 12428 nanofilt_2.8.0-1_all.deb 7172b943946c50dc19fd0eb31ac42bb6538c5c38a534c958a7ba4288b1aca4af 6764 nanofilt_2.8.0-1_armhf.buildinfo Files: d96463835f89ef5ce64e017e89240856 12428 science optional nanofilt_2.8.0-1_all.deb c5138ac522354f5614e812591217b2e5 6764 science optional nanofilt_2.8.0-1_armhf.buildinfo Fri May 12 02:44:16 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/nanofilt_2.8.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/nanofilt_2.8.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/nanofilt_2.8.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/b1/nanofilt_2.8.0-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.s8LLupxn/b2/nanofilt_2.8.0-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.510s) 0.510s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Fri May 12 02:44:18 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Fri May 12 02:44:18 UTC 2023 I: nanofilt from bookworm built successfully and reproducibly on armhf. Fri May 12 02:44:20 UTC 2023 I: Submitting .buildinfo files to external archives: Fri May 12 02:44:20 UTC 2023 I: Submitting 8.0K b1/nanofilt_2.8.0-1_armhf.buildinfo.asc Fri May 12 02:44:21 UTC 2023 I: Submitting 8.0K b2/nanofilt_2.8.0-1_armhf.buildinfo.asc Fri May 12 02:44:21 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri May 12 02:44:21 UTC 2023 I: Done submitting .buildinfo files. Fri May 12 02:44:21 UTC 2023 I: Removing signed nanofilt_2.8.0-1_armhf.buildinfo.asc files: removed './b1/nanofilt_2.8.0-1_armhf.buildinfo.asc' removed './b2/nanofilt_2.8.0-1_armhf.buildinfo.asc'