Mon May 22 21:06:59 UTC 2023 I: starting to build grabix/bookworm/armhf on jenkins on '2023-05-22 21:06' Mon May 22 21:06:59 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_23/13238/console.log Mon May 22 21:06:59 UTC 2023 I: Downloading source for bookworm/grabix=0.1.7-4 --2023-05-22 21:06:59-- http://cdn-fastly.deb.debian.org/debian/pool/main/g/grabix/grabix_0.1.7-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2019 (2.0K) [text/prs.lines.tag] Saving to: ‘grabix_0.1.7-4.dsc’ 0K . 100% 134M=0s 2023-05-22 21:06:59 (134 MB/s) - ‘grabix_0.1.7-4.dsc’ saved [2019/2019] Mon May 22 21:07:00 UTC 2023 I: grabix_0.1.7-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: grabix Binary: grabix Architecture: any Version: 0.1.7-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/arq5x/grabix Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/grabix Vcs-Git: https://salsa.debian.org/med-team/grabix.git Testsuite: autopkgtest Testsuite-Triggers: less, tabix, time Build-Depends: debhelper-compat (= 13), zlib1g-dev, python3, tabix, time, less Package-List: grabix deb science optional arch=any Checksums-Sha1: 801f2c288c7889d46f8a02f3d2b5a279a734e9c5 632258 grabix_0.1.7.orig.tar.gz c87a37d471749fdff177b1f058593864d9f089db 17276 grabix_0.1.7-4.debian.tar.xz Checksums-Sha256: d90735c55c0985a4d751858d7ce9e36ad534fff4103257e8e981e34d5c915b28 632258 grabix_0.1.7.orig.tar.gz f35495b062c4d106d31cf16f07ea09aa407661f931b1330eb481e4d49b9fa3c0 17276 grabix_0.1.7-4.debian.tar.xz Files: abbac977d3c61b1892b30810d2f17281 632258 grabix_0.1.7.orig.tar.gz aa55faac0bc984d81b53fac16193c671 17276 grabix_0.1.7-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmN3b0MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG1VQ/+LrxJ19iYS7eOejPRXSVMrwa388nF9G81 B6jhNEX297NiWw/ChS0aaamBhu8IP6Lcje/lLY2Gvc6EppEVqcEucHS7vX3FS5+3 kvKkEwG+s1DkOdNC0W1tqjR3llCV3jDtZzFC8AVZno1cZhKKS0skRDeD41xR2VhM ZcTTiqZiHm/tWXV9NlG224Xt5PG5cLZkdxB10NDBw4+y0afBC7I/rHmt1SrYCuKR Y6nRaPFlTE0jeQAxdudeDk+/lKkGU7CleIPZzOPk7TU2SoJ52riA3b8CKKTDGckj utYcb2+NYeQcylklazlmW/JrAmQQU+P8dXZst8QN3e3xQBFJMyFnFzbUcTrcAc1c aMUiVoaK10XN3+HW0c+S/6hZW4/fG278Z6+szMW8PXbk2yS5yDs7whhY2jvQUzlz qRXsEu+FXeBrpFhugTRceBH22sdeyx6uFINKRoS6vnsXwxxH9+iQj2sK9+W3EdvV hSyRtGhg9XT36yYLFm2uy4Uf9lNpcNRBREvVDJCOeLlHEGtG6TYN6/bfhrt/KdU3 tV3cOT06Q53KcGyGgWAuSrx2Q8fmaNZBxbQRUsxgedVB3eGYJArF1UVqBGerWFvP R3lTToJd1bA2OZfOBNjb11yB7h4gks7Gq8xwGCpUp3LmSu3p4RV3DcsShKioC9kr XqbAGRcHYHE= =f0EO -----END PGP SIGNATURE----- Mon May 22 21:07:00 UTC 2023 I: Checking whether the package is not for us Mon May 22 21:07:00 UTC 2023 I: Starting 1st build on remote node cbxi4b-armhf-rb.debian.net. Mon May 22 21:07:00 UTC 2023 I: Preparing to do remote build '1' on cbxi4b-armhf-rb.debian.net. Mon May 22 21:11:02 UTC 2023 I: Deleting $TMPDIR on cbxi4b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 22 09:07:12 -12 2023 I: pbuilder-time-stamp: 1684789632 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [grabix_0.1.7-4.dsc] I: copying [./grabix_0.1.7.orig.tar.gz] I: copying [./grabix_0.1.7-4.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Nov 17 23:40:51 2022 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./grabix_0.1.7-4.dsc: no acceptable signature found dpkg-source: info: extracting grabix in grabix-0.1.7 dpkg-source: info: unpacking grabix_0.1.7.orig.tar.gz dpkg-source: info: unpacking grabix_0.1.7-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_assignment_of_char_to_pointer.patch dpkg-source: info: applying Hardening.patch dpkg-source: info: applying warnings.patch dpkg-source: info: applying introduceLTO.patch dpkg-source: info: applying fix_test.patch dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/22384/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='f5595cbb90964fd8a61082b6f8aa7133' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='22384' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/pbuilderrc_vRqY --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/b1 --logfile b1/build.log grabix_0.1.7-4.dsc' SUDO_GID='116' SUDO_UID='112' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux cbxi4b 5.10.0-23-armmp #1 SMP Debian 5.10.179-1 (2023-05-12) armv7l GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/22384/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev, python3, tabix, time, less dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on tabix; however: Package tabix is not installed. pbuilder-satisfydepends-dummy depends on time; however: Package time is not installed. pbuilder-satisfydepends-dummy depends on less; however: Package less is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} less{a} libarchive-zip-perl{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhtscodecs2{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-minimal{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tabix{a} time{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 47 newly installed, 0 to remove and 0 not upgraded. Need to get 24.8 MB of archives. After unpacking 90.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf libpython3.11-minimal armhf 3.11.2-6 [798 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libexpat1 armhf 2.5.0-1 [79.9 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf python3.11-minimal armhf 3.11.2-6 [1714 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf python3-minimal armhf 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf libreadline8 armhf 8.2-1.3 [144 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf libpython3.11-stdlib armhf 3.11.2-6 [1678 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf python3.11 armhf 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf libpython3-stdlib armhf 3.11.2-1+b1 [9296 B] Get: 11 http://deb.debian.org/debian bookworm/main armhf python3 armhf 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf less armhf 590-2 [124 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 21 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 23 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 31 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 32 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 33 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 34 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 35 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 36 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 37 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 38 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 39 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 40 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 41 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 42 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Get: 43 http://deb.debian.org/debian bookworm/main armhf libdeflate0 armhf 1.14-1 [52.2 kB] Get: 44 http://deb.debian.org/debian bookworm/main armhf libhtscodecs2 armhf 1.3.0-4 [60.4 kB] Get: 45 http://deb.debian.org/debian bookworm/main armhf tabix armhf 1.16+ds-3 [388 kB] Get: 46 http://deb.debian.org/debian bookworm/main armhf time armhf 1.9-0.2 [50.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [902 kB] Fetched 24.8 MB in 2s (14.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.2-6) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.5.0-1_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_armhf.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:armhf (3.11.2-6) ... Setting up libexpat1:armhf (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19645 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_armhf.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../3-libreadline8_8.2-1.3_armhf.deb ... Unpacking libreadline8:armhf (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_armhf.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_armhf.deb ... 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Setting up less (590-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up tabix (1.16+ds-3) ... Setting up libelf1:armhf (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:armhf (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/grabix-0.1.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../grabix_0.1.7-4_source.changes dpkg-buildpackage: info: source package grabix dpkg-buildpackage: info: source version 0.1.7-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/grabix-0.1.7' rm -f grabix make[1]: Leaving directory '/build/grabix-0.1.7' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/grabix-0.1.7' gcc -g -O2 -ffile-prefix-map=/build/grabix-0.1.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -flto -o grabix grabix_main.cpp grabix.cpp bgzf.c -Wl,-z,relro -Wl,-z,now -lstdc++ -lz -Wl,-flto make[1]: Leaving directory '/build/grabix-0.1.7' debian/rules override_dh_auto_test make[1]: Entering directory '/build/grabix-0.1.7' PATH=/build/grabix-0.1.7:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games sh debian/testdata/test.sh indexing 1.27user 0.02system 0:01.30elapsed 99%CPU (0avgtext+0avgdata 2728maxresident)k 0inputs+8outputs (0major+137minor)pagefaults 0swaps indexed checking indexing at bounds: ..............................................................................................Traceback (most recent call last): File "/build/grabix-0.1.7/tests/test-fastq.py", line 30, in check(f, i) File "/build/grabix-0.1.7/tests/test-fastq.py", line 18, in check assert exp == obs, (exp, obs) ^^^^^^^^^^ AssertionError: ([b'@read_5001'], [b'@read_1']) FAIL last record OK ./debian/testdata/test.clinvar.vcf OK ./debian/testdata/test.exac.vcf OK ./debian/testdata/test.PLs.vcf OK ./debian/testdata/test.fusions.vcf OK ./debian/testdata/test.cosmic.vcf make[1]: Leaving directory '/build/grabix-0.1.7' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/grabix/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/grabix/usr/bin/grabix contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'grabix' in '../grabix_0.1.7-4_armhf.deb'. dpkg-deb: building package 'grabix-dbgsym' in '../grabix-dbgsym_0.1.7-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../grabix_0.1.7-4_armhf.buildinfo dpkg-genchanges --build=binary -O../grabix_0.1.7-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/22384 and its subdirectories I: Current time: Mon May 22 09:10:55 -12 2023 I: pbuilder-time-stamp: 1684789855 Mon May 22 21:11:06 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Mon May 22 21:11:06 UTC 2023 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Mon May 22 21:14:37 UTC 2023 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Mon May 22 21:14:41 UTC 2023 I: grabix_0.1.7-4_armhf.changes: Format: 1.8 Date: Fri, 18 Nov 2022 12:39:10 +0100 Source: grabix Binary: grabix grabix-dbgsym Architecture: armhf Version: 0.1.7-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: grabix - wee tool for random access into BGZF files Changes: grabix (0.1.7-4) unstable; urgency=medium . * Team upload. * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: f298b7f3af97e6f7c1c3eb53c7b5185305729ef4 80564 grabix-dbgsym_0.1.7-4_armhf.deb bcf66bce418c9937c2ba0503eb7e20917d95bf46 5499 grabix_0.1.7-4_armhf.buildinfo f94f60a18c120098027f75592d8b03bf6a4b7afd 15156 grabix_0.1.7-4_armhf.deb Checksums-Sha256: 3cd8a966471155d99303b1f93abb129ff9c1f34ed8480dab95cdc40cbfe2c6c6 80564 grabix-dbgsym_0.1.7-4_armhf.deb 712309a4f3c2432ce1247c75f195b760690e924178b299f80cb4c570a3530850 5499 grabix_0.1.7-4_armhf.buildinfo 170fb4eb6014fa419c7339cb603bbed3fa73389e679d38e337423a25c4d0673a 15156 grabix_0.1.7-4_armhf.deb Files: 8541f782282e3a2992f2be589aeda01c 80564 debug optional grabix-dbgsym_0.1.7-4_armhf.deb 4d5245b4828c07dcb0f03ba052c11e15 5499 science optional grabix_0.1.7-4_armhf.buildinfo 16eb03eee875a6a6ab954c39c7ada76f 15156 science optional grabix_0.1.7-4_armhf.deb Mon May 22 21:14:42 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/grabix_0.1.7-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/grabix_0.1.7-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/grabix_0.1.7-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/b1/grabix_0.1.7-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.7gBOE2Ry/b2/grabix_0.1.7-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.329s) 0.329s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 22 21:14:43 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 22 21:14:43 UTC 2023 I: grabix from bookworm built successfully and reproducibly on armhf. Mon May 22 21:14:44 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 22 21:14:44 UTC 2023 I: Submitting 8.0K b1/grabix_0.1.7-4_armhf.buildinfo.asc Mon May 22 21:14:46 UTC 2023 I: Submitting 8.0K b2/grabix_0.1.7-4_armhf.buildinfo.asc Mon May 22 21:14:47 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 22 21:14:47 UTC 2023 I: Done submitting .buildinfo files. Mon May 22 21:14:47 UTC 2023 I: Removing signed grabix_0.1.7-4_armhf.buildinfo.asc files: removed './b1/grabix_0.1.7-4_armhf.buildinfo.asc' removed './b2/grabix_0.1.7-4_armhf.buildinfo.asc'