Sat Apr 8 12:37:29 UTC 2023 I: starting to build seqan-needle/bookworm/arm64 on jenkins on '2023-04-08 12:37' Sat Apr 8 12:37:29 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_16/21741/console.log Sat Apr 8 12:37:29 UTC 2023 I: Downloading source for bookworm/seqan-needle=1.0.1.0.0.git.3011926+ds-4 --2023-04-08 12:37:30-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/seqan-needle/seqan-needle_1.0.1.0.0.git.3011926%2bds-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2281 (2.2K) [text/prs.lines.tag] Saving to: ‘seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc’ 0K .. 100% 290M=0s 2023-04-08 12:37:30 (290 MB/s) - ‘seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc’ saved [2281/2281] Sat Apr 8 12:37:30 UTC 2023 I: seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqan-needle Binary: seqan-needle, seqan-needle-doc Architecture: any all Version: 1.0.1.0.0.git.3011926+ds-4 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/seqan/needle Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/seqan-needle Vcs-Git: https://salsa.debian.org/med-team/seqan-needle.git Build-Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen Package-List: seqan-needle deb science optional arch=any seqan-needle-doc deb doc optional arch=all Checksums-Sha1: 6f02b770d15e7b9c7908ab2c4131d7de060f2885 5068548 seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz e484a3867f677c7a91ac21744337637bcdcfd25b 6052 seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz Checksums-Sha256: 6ec1cf11797f5d7660970bb1ed8a1d58eafc61ba8bc2bc5afcbb61582413298b 5068548 seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz 0f39029448ddca892db717c02cfd153eccd4b315ee6a2fb42db73d7eaed454ef 6052 seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz Files: 6f0d8eeaa8523806c16d305d60696d42 5068548 seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz 16c8be5f321c4109a6b2980b8139efa0 6052 seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmN/StERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGQwA/9FzYd1wuKt/yT2mjRMvzrPqCy81pW6tRV uZM3lD1/ZCW/Cu+ARhxMG3EERb6tGDx1/hRKfhhYe9VVDxVJRybUKS6F/S9vm8bH 5w9YWYhYm5Y6KQXxQbgm128nOAy8tFO2umKsWmxgkn5XPKvV51uI4dittY4czk4f 4zmpsd4l6L7kTtnrKz3h+TjyX/nYq1JLI2dOt/9nTRnQG5p4LoOpsi6WMjNIAaM4 FYDdfjAPaZOnIBrYP29z0ER2UETL6HvVdy4kR2X6AVCykkaxa8Q6zCKU4eJkccNL TPuWIfn50/FVkki37FnGtZdqayyjljeYPRp48/Hb5jiSYjp2EEr5VLj/qzs6vctG T1GVs7+c+XlnWxPfFQ8CqGYo9ZcZfpzDW2Peu98PZgxudZ0jwEwXg5f45mhhuHft cbOSwAIObqSV5BVM/JEQzqN7PeIAiuHORvEvgNifvn6nd9bZSmEQPyCdAe3z/AAR dZItgfEPUfBGLSd8RKctNFFYSm7A+vrLHQ3YFLrGfVRPhoWshkiCL8dJ2gqI4NDO Wc1nQ4uJWY7P23m01jHKVKCgV7gBErvzEgtfNuIQ1gNGCn9ZyUl/VdsjmToEnQD5 PxZI4KxvxusI29kKB+CdiowsMYwp94z3VKODhYjxwqPXY0LshPWDwu6CVMsNY0mW WF58scte39E= =DcMj -----END PGP SIGNATURE----- Sat Apr 8 12:37:30 UTC 2023 I: Checking whether the package is not for us Sat Apr 8 12:37:30 UTC 2023 I: Starting 1st build on remote node codethink12-arm64.debian.net. Sat Apr 8 12:37:30 UTC 2023 I: Preparing to do remote build '1' on codethink12-arm64.debian.net. Sat Apr 8 12:51:53 UTC 2023 I: Deleting $TMPDIR on codethink12-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Apr 8 00:37:34 -12 2023 I: pbuilder-time-stamp: 1680957454 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc] I: copying [./seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz] I: copying [./seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Nov 23 22:43:29 2022 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc: no acceptable signature found dpkg-source: info: extracting seqan-needle in seqan-needle-1.0.1.0.0.git.3011926+ds dpkg-source: info: unpacking seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz dpkg-source: info: unpacking seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying privacy dpkg-source: info: applying debian_seqan3 dpkg-source: info: applying create_doc_without_previous_binary_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/31443/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='31443' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/pbuilderrc_2Pgs --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/b1 --logfile b1/build.log seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink12-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 5 22:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/31443/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libseqan3-dev (>= 3.2.0+ds-5); however: Package libseqan3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcereal-dev{a} libclang-cpp14{a} libclang1-14{a} libcurl4{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libllvm14{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libseqan3-dev{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} libz3-4{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 78.1 MB of archives. After unpacking 362 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libproc2-0 arm64 2:4.0.2-3 [60.1 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 procps arm64 2:4.0.2-3 [698 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.1+b3 [619 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libarchive13 arm64 3.6.2-1 [316 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-7 [361 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libjsoncpp25 arm64 1.9.5-4 [72.3 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 librhash0 arm64 1.4.3-3 [131 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 libuv1 arm64 1.44.2-1 [133 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 cmake arm64 3.25.1-1 [6806 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libbsd0 arm64 0.11.7-2 [115 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libedit2 arm64 3.1-20221030-2 [88.1 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 libz3-4 arm64 4.8.12-3.1 [6282 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 libllvm14 arm64 1:14.0.6-12 [19.3 MB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 libclang-cpp14 arm64 1:14.0.6-12 [9866 kB] Get: 54 http://deb.debian.org/debian bookworm/main arm64 libclang1-14 arm64 1:14.0.6-12 [5465 kB] Get: 55 http://deb.debian.org/debian bookworm/main arm64 doxygen arm64 1.9.4-4 [4216 kB] Get: 56 http://deb.debian.org/debian bookworm/main arm64 googletest all 1.12.1-0.2 [506 kB] Get: 57 http://deb.debian.org/debian bookworm/main arm64 libbz2-dev arm64 1.0.8-5+b1 [31.5 kB] Get: 58 http://deb.debian.org/debian bookworm/main arm64 rapidjson-dev all 1.1.0+dfsg2-7.1 [97.7 kB] Get: 59 http://deb.debian.org/debian bookworm/main arm64 libcereal-dev arm64 1.3.2+dfsg-4 [221 kB] Get: 60 http://deb.debian.org/debian bookworm/main arm64 libgtest-dev arm64 1.12.1-0.2 [231 kB] Get: 61 http://deb.debian.org/debian bookworm/main arm64 libpkgconf3 arm64 1.8.1-1 [35.3 kB] Get: 62 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Get: 63 http://deb.debian.org/debian bookworm/main arm64 libseqan3-dev all 3.2.0+ds-6 [752 kB] Get: 64 http://deb.debian.org/debian bookworm/main arm64 pkgconf-bin arm64 1.8.1-1 [28.9 kB] Get: 65 http://deb.debian.org/debian bookworm/main arm64 pkgconf arm64 1.8.1-1 [25.9 kB] Get: 66 http://deb.debian.org/debian bookworm/main arm64 pkg-config arm64 1.8.1-1 [13.7 kB] Fetched 78.1 MB in 2s (42.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_arm64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../04-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../10-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../17-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.1+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.1+b3) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../19-libarchive13_3.6.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.6.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-needle_1.0.1.0.0.git.3011926+ds-4_source.changes dpkg-buildpackage: info: source package seqan-needle dpkg-buildpackage: info: source version 1.0.1.0.0.git.3011926+ds-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' rm -Rf lib/seqan3 dh_auto_configure -- -DSEQAN3_NO_LEMON=OFF cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSEQAN3_NO_LEMON=OFF .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- You can run `make` to build the application. -- Found Doxygen: /usr/bin/doxygen -- You can run `make doc` to build api documentation. -- You can run `make test` to build and run tests. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' dh_auto_build --arch cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 20%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o [ 40%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/ibf.cpp cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/estimate.cpp [ 60%] Linking CXX static library ../lib/libneedle_lib.a cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/needle_lib.dir/cmake_clean_target.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libneedle_lib.a CMakeFiles/needle_lib.dir/ibf.cpp.o CMakeFiles/needle_lib.dir/estimate.cpp.o /usr/bin/ranlib ../lib/libneedle_lib.a make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 60%] Built target needle_lib make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 80%] Building CXX object src/CMakeFiles/needle.dir/main.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle.dir/main.cpp.o -MF CMakeFiles/needle.dir/main.cpp.o.d -o CMakeFiles/needle.dir/main.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/main.cpp [100%] Linking CXX executable ../bin/needle cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle.dir/main.cpp.o -o ../bin/needle ../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [100%] Built target needle make[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' obj-*/bin/needle --export-help man > debian/needle.1 obj-*/bin/needle count --export-help man > debian/needle-count.1 obj-*/bin/needle estimate --export-help man > debian/needle-estimate.1 obj-*/bin/needle ibf --export-help man > debian/needle-ibf.1 obj-*/bin/needle minimiser --export-help man > debian/needle-minimiser.1 make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' doxygen doc/doxygen_cfg warning: tag INCLUDE_PATH: include path '${CMAKE_SOURCE_DIR}/include' does not exist warning: source '${CMAKE_SOURCE_DIR}/include' is not a readable file or directory... skipping. Doxygen version used: 1.9.4 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include Searching for files in directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src Reading and parsing tag files Parsing files Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/estimate.h... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/estimate.h... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/ibf.h... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/ibf.h... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/shared.h... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/shared.h... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/CMakeLists.txt... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/CMakeLists.txt... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/estimate.cpp... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/estimate.cpp... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/ibf.cpp... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/ibf.cpp... Preprocessing /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/main.cpp... Parsing file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/main.cpp... Reading /build/seqan-needle-1.0.1.0.0.git.3011926+ds/LICENSE.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/estimate.h... Generating code for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/ibf.h... Generating code for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/shared.h... Generating file documentation... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/estimate.h... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/ibf.h... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/include/shared.h... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/LICENSE.md... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/CMakeLists.txt... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/estimate.cpp... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/ibf.cpp... Generating docs for file /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/main.cpp... Generating page documentation... Generating docs for page md__build_seqan_needle_1_0_1_0_0_git_3011926_ds_LICENSE... Generating group documentation... Generating class documentation... Generating docs for compound all_arguments... Generating docs for compound estimate_arguments... Generating docs for compound estimate_ibf_arguments... Generating docs for compound min_arguments... Generating docs for compound minimiser_arguments... Generating docs for compound my_traits... Generating docs for compound RandomGenerator... Generating concept documentation... Generating namespace index... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... lookup cache used 116/65536 hits=249 misses=123 finished... make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' debian/rules override_dh_auto_test-indep make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' echo "Do Nothing" Do Nothing make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' dh_auto_test -Nseqan-needle-doc cd obj-aarch64-linux-gnu && make -j8 test ARGS\+=--verbose ARGS\+=-j8 make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j8 UpdateCTestConfiguration from :/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu Constructing a list of tests gmake[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/rule gmake[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 13 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/all gmake[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= Dependencies file "src/CMakeFiles/needle_lib.dir/estimate.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Dependencies file "src/CMakeFiles/needle_lib.dir/ibf.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle_lib gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 23%] Built target needle_lib /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 30%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/minimiser_test.cpp [ 38%] Linking CXX executable minimiser_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o minimiser_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 38%] Built target minimiser_test /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 46%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/count_test.cpp [ 53%] Linking CXX executable count_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o count_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 53%] Built target count_test /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 61%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/estimate_test.cpp [ 69%] Linking CXX executable estimate_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o estimate_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 69%] Built target estimate_test /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 76%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/ibf_test.cpp [ 84%] Linking CXX executable ibf_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ibf_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 84%] Built target ibf_test /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 92%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/ibfmin_test.cpp [100%] Linking CXX executable ibfmin_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ibfmin_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [100%] Built target ibfmin_test /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/api_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/api_test.dir/build'. gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [100%] Built target api_test gmake[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' gmake[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule gmake[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 60 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/all gmake[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 1%] Creating directories for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-mkdir [ 3%] Performing download step (verify) for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/verify-datasource--mini_gen.fasta.cmake -- verifying file... file='/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_gen.fasta' -- verifying file... done cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-download [ 5%] No update step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-update [ 6%] No patch step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-patch [ 8%] No configure step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-configure [ 10%] No build step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-build [ 11%] Performing install step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E create_symlink /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_gen.fasta /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/mini_gen.fasta cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-install [ 13%] No test step for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-test [ 15%] Completed 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-done gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 15%] Built target datasource--mini_gen.fasta /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 20%] Built target needle_lib /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake --color= Dependencies file "src/CMakeFiles/needle.dir/main.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle.dir/build'. gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 23%] Built target needle /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 25%] Creating directories for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-mkdir [ 26%] Performing download step (verify) for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/verify-datasource--mini_example.fasta.cmake -- verifying file... file='/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_example.fasta' -- verifying file... done cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-download [ 28%] No update step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-update [ 30%] No patch step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-patch [ 31%] No configure step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-configure [ 33%] No build step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-build [ 35%] Performing install step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E create_symlink /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_example.fasta /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/mini_example.fasta cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-install [ 36%] No test step for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-test [ 38%] Completed 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-done gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 38%] Built target datasource--mini_example.fasta /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 40%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/count_options_test.cpp [ 41%] Linking CXX executable count_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o count_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 41%] Built target count_options_test /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 43%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/needle_options_test.cpp [ 45%] Linking CXX executable needle_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o needle_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 45%] Built target needle_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 46%] Creating directories for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.minimiser-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-mkdir [ 48%] Performing download step (verify) for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/verify-datasource--mini_example.minimiser.cmake -- verifying file... file='/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_example.minimiser' -- verifying file... done cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-download [ 50%] No update step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-update [ 51%] No patch step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-patch [ 53%] No configure step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-configure [ 55%] No build step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-build [ 56%] Performing install step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E create_symlink /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/mini_example.minimiser /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/mini_example.minimiser cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-install [ 58%] No test step for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-test [ 60%] Completed 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-done gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 60%] Built target datasource--mini_example.minimiser /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 61%] Creating directories for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--exp_01.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-mkdir [ 63%] Performing download step (verify) for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/verify-datasource--exp_01.fasta.cmake -- verifying file... file='/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/exp_01.fasta' -- verifying file... done cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-download [ 65%] No update step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-update [ 66%] No patch step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-patch [ 68%] No configure step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-configure [ 70%] No build step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-build [ 71%] Performing install step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E create_symlink /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/exp_01.fasta /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/exp_01.fasta cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-install [ 73%] No test step for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-test [ 75%] Completed 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-done gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 75%] Built target datasource--exp_01.fasta /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 76%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/ibf_options_test.cpp [ 78%] Linking CXX executable ibf_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ibf_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 78%] Built target ibf_options_test /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 80%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/minimiser_options_test.cpp [ 81%] Linking CXX executable minimiser_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o minimiser_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 81%] Built target minimiser_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 83%] Creating directories for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--ibf_1-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-mkdir [ 85%] Performing download step (verify) for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/verify-datasource--ibf_1.cmake -- verifying file... file='/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/IBF_1' -- verifying file... done cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-download [ 86%] No update step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-update [ 88%] No patch step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-patch [ 90%] No configure step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-configure [ 91%] No build step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-build [ 93%] Performing install step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E create_symlink /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/IBF_1 /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/IBF_1 cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-install [ 95%] No test step for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-test [ 96%] Completed 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-done gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 96%] Built target datasource--ibf_1 /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [ 98%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/estimate_options_test.cpp [100%] Linking CXX executable estimate_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o estimate_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [100%] Built target estimate_options_test /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/depend gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/cli_test.dir/DependInfo.cmake --color= gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/build gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/cli_test.dir/build'. gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' [100%] Built target cli_test gmake[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' gmake[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test/api/count_test 1: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/count_test 1: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api 1: Test timeout computed to be: 10000000 test 2 Start 2: test/api/estimate_test 2: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/estimate_test 2: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api 2: Test timeout computed to be: 10000000 test 3 Start 3: test/api/ibf_test 3: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/ibf_test 3: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api 3: Test timeout computed to be: 10000000 test 4 Start 4: test/api/ibfmin_test 4: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/ibfmin_test 4: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api 4: Test timeout computed to be: 10000000 test 5 Start 5: test/api/minimiser_test 5: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/minimiser_test 5: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api 5: Test timeout computed to be: 10000000 test 6 Start 6: test/cli/needle_options_test 6: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/needle_options_test 6: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 6: Test timeout computed to be: 10000000 test 7 Start 7: test/cli/ibf_options_test 7: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/ibf_options_test 7: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 7: Test timeout computed to be: 10000000 test 8 Start 8: test/cli/minimiser_options_test 8: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/minimiser_options_test 8: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 8: Test timeout computed to be: 10000000 1: Running main() from ./googletest/src/gtest_main.cc 1: [==========] Running 3 tests from 1 test suite. 1: [----------] Global test environment set-up. 1: [----------] 3 tests from count 1: [ RUN ] count.small_example 1: [ OK ] count.small_example (2 ms) 1: [ RUN ] count.small_example_paired 1: [ OK ] count.small_example_paired (1 ms) 1: [ RUN ] count.small_example_exclude 1: [ OK ] count.small_example_exclude (0 ms) 1: [----------] 3 tests from count (4 ms total) 1: 1: [----------] Global test environment tear-down 1: [==========] 3 tests from 1 test suite ran. (4 ms total) 1: [ PASSED ] 3 tests. 2: Running main() from ./googletest/src/gtest_main.cc 2: [==========] Running 10 tests from 1 test suite. 2: [----------] Global test environment set-up. 2: [----------] 10 tests from estimate 2: [ RUN ] estimate.small_example 2: [ OK ] estimate.small_example (10 ms) 2: [ RUN ] estimate.small_example_uncompressed 2: [ OK ] estimate.small_example_uncompressed (1 ms) 2: [ RUN ] estimate.small_example_gene_not_found 2: [ OK ] estimate.small_example_gene_not_found (1 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level 2: [ OK ] estimate.small_example_different_expressions_per_level (1 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1 2: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1 (1 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed 2: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed (1 ms) 2: [ RUN ] estimate.example 3: Running main() from ./googletest/src/gtest_main.cc 3: [==========] Running 8 tests from 1 test suite. 3: [----------] Global test environment set-up. 3: [----------] 8 tests from ibf 3: [ RUN ] ibf.given_expression_thresholds 3: [ OK ] ibf.given_expression_thresholds (1 ms) 3: [ RUN ] ibf.given_expression_thresholds_include_file 3: [ OK ] ibf.given_expression_thresholds_include_file (1 ms) 3: [ RUN ] ibf.given_expression_thresholds_exclude_file 3: [ OK ] ibf.given_expression_thresholds_exclude_file (0 ms) 3: [ RUN ] ibf.no_given_expression_thresholds 3: [ OK ] ibf.no_given_expression_thresholds (0 ms) 3: [ RUN ] ibf.expression_thresholds_by_genome 3: [ OK ] ibf.expression_thresholds_by_genome (0 ms) 3: [ RUN ] ibf.throws 3: [ OK ] ibf.throws (0 ms) 3: [ RUN ] ibf.given_cutoffs 3: [ OK ] ibf.given_cutoffs (0 ms) 3: [ RUN ] ibf.different_file_sizes 4: Running main() from ./googletest/src/gtest_main.cc 4: [==========] Running 4 tests from 1 test suite. 4: [----------] Global test environment set-up. 4: [----------] 4 tests from ibfmin 4: [ RUN ] ibfmin.given_expression_thresholds 4: [ OK ] ibfmin.given_expression_thresholds (1 ms) 4: [ RUN ] ibfmin.no_given_expression_thresholds 4: [ OK ] ibfmin.no_given_expression_thresholds (0 ms) 4: [ RUN ] ibfmin.expression_thresholds_by_genome 4: [ OK ] ibfmin.expression_thresholds_by_genome (5 ms) 4: [ RUN ] ibfmin.different_shape 4: [ OK ] ibfmin.different_shape (1 ms) 4: [----------] 4 tests from ibfmin (9 ms total) 4: 4: [----------] Global test environment tear-down 4: [==========] 4 tests from 1 test suite ran. (9 ms total) 4: [ PASSED ] 4 tests. 5: Running main() from ./googletest/src/gtest_main.cc 5: [==========] Running 8 tests from 1 test suite. 5: [----------] Global test environment set-up. 5: [----------] 8 tests from minimiser 5: [ RUN ] minimiser.small_example 5: [ OK ] minimiser.small_example (2 ms) 5: [ RUN ] minimiser.small_example_different_shape 5: [ OK ] minimiser.small_example_different_shape (0 ms) 5: [ RUN ] minimiser.small_example_samplewise 5: [ OK ] minimiser.small_example_samplewise (1 ms) 5: [ RUN ] minimiser.cutoff_by_filesize 5: [ OK ] minimiser.cutoff_by_filesize (0 ms) 5: [ RUN ] minimiser.small_example_two_threads 5: [ OK ] minimiser.small_example_two_threads (5 ms) 5: [ RUN ] minimiser.small_example_include 5: [ OK ] minimiser.small_example_include (0 ms) 5: [ RUN ] minimiser.small_example_exclude 5: [ OK ] minimiser.small_example_exclude (1 ms) 5: [ RUN ] minimiser.small_example_shape 5: [ OK ] minimiser.small_example_shape (0 ms) 5: [----------] 8 tests from minimiser (13 ms total) 5: 5: [----------] Global test environment tear-down 5: [==========] 8 tests from 1 test suite ran. (13 ms total) 5: [ PASSED ] 8 tests. 6: Running main() from ./googletest/src/gtest_main.cc 6: [==========] Running 2 tests from 1 test suite. 6: [----------] Global test environment set-up. 6: [----------] 2 tests from needle_options_test 6: [ RUN ] needle_options_test.no_options 7: Running main() from ./googletest/src/gtest_main.cc 7: [==========] Running 19 tests from 1 test suite. 7: [----------] Global test environment set-up. 7: [----------] 19 tests from ibf_options_test 7: [ RUN ] ibf_options_test.ibf_no_options 1/10 Test #1: test/api/count_test ............... Passed 0.09 sec test 9 Start 9: test/cli/estimate_options_test 9: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/estimate_options_test 9: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 9: Test timeout computed to be: 10000000 2/10 Test #4: test/api/ibfmin_test .............. Passed 0.08 sec test 10 Start 10: test/cli/count_options_test 10: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/count_options_test 10: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 10: Test timeout computed to be: 10000000 3/10 Test #5: test/api/minimiser_test ........... Passed 0.08 sec 6: [ OK ] needle_options_test.no_options (33 ms) 6: [ RUN ] needle_options_test.fail_no_argument 7: [ OK ] ibf_options_test.ibf_no_options (43 ms) 7: [ RUN ] ibf_options_test.ibf_fail_no_argument 8: Running main() from ./googletest/src/gtest_main.cc 8: [==========] Running 8 tests from 1 test suite. 8: [----------] Global test environment set-up. 8: [----------] 8 tests from minimiser_options_test 8: [ RUN ] minimiser_options_test.no_options 9: Running main() from ./googletest/src/gtest_main.cc 9: [==========] Running 5 tests from 1 test suite. 9: [----------] Global test environment set-up. 9: [----------] 5 tests from estimate_options_test 9: [ RUN ] estimate_options_test.no_options 10: Running main() from ./googletest/src/gtest_main.cc 10: [==========] Running 5 tests from 1 test suite. 10: [----------] Global test environment set-up. 10: [----------] 5 tests from count_options_test 10: [ RUN ] count_options_test.no_options 8: [ OK ] minimiser_options_test.no_options (37 ms) 8: [ RUN ] minimiser_options_test.fail_no_argument 6: [ OK ] needle_options_test.fail_no_argument (28 ms) 6: [----------] 2 tests from needle_options_test (61 ms total) 6: 6: [----------] Global test environment tear-down 6: [==========] 2 tests from 1 test suite ran. (61 ms total) 6: [ PASSED ] 2 tests. 4/10 Test #6: test/cli/needle_options_test ...... Passed 0.08 sec 9: [ OK ] estimate_options_test.no_options (32 ms) 9: [ RUN ] estimate_options_test.fail_no_argument 8: [ OK ] minimiser_options_test.fail_no_argument (31 ms) 8: [ RUN ] minimiser_options_test.with_arguments 7: [ OK ] ibf_options_test.ibf_fail_no_argument (43 ms) 7: [ RUN ] ibf_options_test.ibf_fail_contradiction 7: [ OK ] ibf_options_test.ibf_fail_contradiction (24 ms) 7: [ RUN ] ibf_options_test.ibf_fail_contradiction2 9: [ OK ] estimate_options_test.fail_no_argument (47 ms) 9: [ RUN ] estimate_options_test.with_argument 8: [ OK ] minimiser_options_test.with_arguments (39 ms) 8: [ RUN ] minimiser_options_test.cutoff 10: [ OK ] count_options_test.no_options (88 ms) 10: [ RUN ] count_options_test.fail_no_argument 7: [ OK ] ibf_options_test.ibf_fail_contradiction2 (23 ms) 7: [ RUN ] ibf_options_test.ibf_fail_no_fpr 8: [ OK ] minimiser_options_test.cutoff (39 ms) 8: [ RUN ] minimiser_options_test.multiple_sample 7: [ OK ] ibf_options_test.ibf_fail_no_fpr (36 ms) 7: [ RUN ] ibf_options_test.ibf_fail_incorrect_number_of_fprs 10: [ OK ] count_options_test.fail_no_argument (40 ms) 10: [ RUN ] count_options_test.with_arguments 8: [ OK ] minimiser_options_test.multiple_sample (27 ms) 8: [ RUN ] minimiser_options_test.multithreads 10: [ OK ] count_options_test.with_arguments (42 ms) 10: [ RUN ] count_options_test.multithreads 7: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (52 ms) 7: [ RUN ] ibf_options_test.ibf_with_argument 8: [ OK ] minimiser_options_test.multithreads (52 ms) 8: [ RUN ] minimiser_options_test.paired 10: [ OK ] count_options_test.multithreads (39 ms) 10: [ RUN ] count_options_test.paired 8: [ OK ] minimiser_options_test.paired (31 ms) 8: [ RUN ] minimiser_options_test.invalid_argument 10: [ OK ] count_options_test.paired (32 ms) 10: [----------] 5 tests from count_options_test (244 ms total) 10: 10: [----------] Global test environment tear-down 10: [==========] 5 tests from 1 test suite ran. (245 ms total) 10: [ PASSED ] 5 tests. 5/10 Test #10: test/cli/count_options_test ....... Passed 0.26 sec 8: [ OK ] minimiser_options_test.invalid_argument (40 ms) 8: [----------] 8 tests from minimiser_options_test (302 ms total) 8: 8: [----------] Global test environment tear-down 8: [==========] 8 tests from 1 test suite ran. (302 ms total) 8: [ PASSED ] 8 tests. 6/10 Test #8: test/cli/minimiser_options_test ... Passed 0.32 sec 3: [ OK ] ibf.different_file_sizes (7830 ms) 3: [----------] 8 tests from ibf (7836 ms total) 3: 3: [----------] Global test environment tear-down 3: [==========] 8 tests from 1 test suite ran. (7836 ms total) 3: [ PASSED ] 8 tests. 7/10 Test #3: test/api/ibf_test ................. Passed 7.86 sec 7: [ OK ] ibf_options_test.ibf_with_argument (8975 ms) 7: [ RUN ] ibf_options_test.ibf_with_argument_with_options 2: [ OK ] estimate.example (10978 ms) 2: [ RUN ] estimate.example_multiple_threads 9: [ OK ] estimate_options_test.with_argument (12323 ms) 9: [ RUN ] estimate_options_test.with_argument_normalization_method 7: [ OK ] ibf_options_test.ibf_with_argument_with_options (6337 ms) 7: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape 2: [ OK ] estimate.example_multiple_threads (8738 ms) 2: [ RUN ] estimate.example_different_expressions_per_level 9: [ OK ] estimate_options_test.with_argument_normalization_method (9455 ms) 9: [ RUN ] estimate_options_test.with_argument_out 7: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (7378 ms) 7: [ RUN ] ibf_options_test.ibfmin_no_options 7: [ OK ] ibf_options_test.ibfmin_no_options (12 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_no_argument 7: [ OK ] ibf_options_test.ibfmin_fail_no_argument (19 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_contradiction 7: [ OK ] ibf_options_test.ibfmin_fail_contradiction (15 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_contradiction2 7: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (15 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_no_fpr 7: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (15 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs 7: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (16 ms) 7: [ RUN ] ibf_options_test.ibfmin_with_argument 7: [ OK ] ibf_options_test.ibfmin_with_argument (15 ms) 7: [ RUN ] ibf_options_test.compressed 7: [ OK ] ibf_options_test.compressed (15 ms) 7: [ RUN ] ibf_options_test.more_hash_functions 7: [ OK ] ibf_options_test.more_hash_functions (16 ms) 7: [ RUN ] ibf_options_test.expression_thresholds 7: [ OK ] ibf_options_test.expression_thresholds (23 ms) 7: [----------] 19 tests from ibf_options_test (23083 ms total) 7: 7: [----------] Global test environment tear-down 7: [==========] 19 tests from 1 test suite ran. (23083 ms total) 7: [ PASSED ] 19 tests. 8/10 Test #7: test/cli/ibf_options_test ......... Passed 23.09 sec 2: [ OK ] estimate.example_different_expressions_per_level (4186 ms) 2: [ RUN ] estimate.example_different_expressions_per_level_multiple_threads 2: [ OK ] estimate.example_different_expressions_per_level_multiple_threads (3608 ms) 2: [----------] 10 tests from estimate (27529 ms total) 2: 2: [----------] Global test environment tear-down 2: [==========] 10 tests from 1 test suite ran. (27529 ms total) 2: [ PASSED ] 10 tests. 9/10 Test #2: test/api/estimate_test ............ Passed 27.54 sec 9: [ OK ] estimate_options_test.with_argument_out (8500 ms) 9: [----------] 5 tests from estimate_options_test (30359 ms total) 9: 9: [----------] Global test environment tear-down 9: [==========] 5 tests from 1 test suite ran. (30359 ms total) 9: [ PASSED ] 5 tests. 10/10 Test #9: test/cli/estimate_options_test .... Passed 30.38 sec 100% tests passed, 0 tests failed out of 10 Total Test time (real) = 476.76 sec make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/seqan-needle-1.0.1.0.0.git.3011926\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/include/robin_hood.h -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/robin_hood/robin_hoodConfig.cmake -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/robin_hood/robin_hood-targets.cmake make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'seqan-needle-doc' in '../seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb'. dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. dpkg-deb: building package 'seqan-needle-dbgsym' in '../seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. dpkg-genbuildinfo --build=binary -O../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo dpkg-genchanges --build=binary -O../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/31443 and its subdirectories I: Current time: Sat Apr 8 00:51:51 -12 2023 I: pbuilder-time-stamp: 1680958311 Sat Apr 8 12:51:54 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink15-arm64.debian.net. Sat Apr 8 12:51:54 UTC 2023 I: Preparing to do remote build '2' on codethink15-arm64.debian.net. Sat Apr 8 13:03:11 UTC 2023 I: Deleting $TMPDIR on codethink15-arm64.debian.net. Sat Apr 8 13:03:12 UTC 2023 I: seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.changes: Format: 1.8 Date: Thu, 24 Nov 2022 11:38:47 +0100 Source: seqan-needle Binary: seqan-needle seqan-needle-dbgsym seqan-needle-doc Architecture: arm64 all Version: 1.0.1.0.0.git.3011926+ds-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: seqan-needle - pre-filter for the counting of very large collections of nucleoti seqan-needle-doc - HTML documentation for seqan-needle and its APIs Closes: 1024458 Changes: seqan-needle (1.0.1.0.0.git.3011926+ds-4) unstable; urgency=medium . * Team upload. * Create doc without previous binary build Closes: #1024458 Checksums-Sha1: dc9599487d2d757670c1d17abaf35b63bb51afb7 5657920 seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb a1deac0bead12bae993738c089b0fd6523a44708 111164 seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb 7e312e3debe57d050f0f23ad943ea1069ee54f51 6911 seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo 368cdfd9226aa08eea64ef02c7e28ba84c58cf1c 239888 seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb Checksums-Sha256: 7486f108515c3c50c71f262ab2a75d86e5ea83ce04933ad64e3e049bad200256 5657920 seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb 5d170d94810a73fe585e0620b1ad5a4c1ad6863c587da428db518ea6540447b2 111164 seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb c40bd430163f7128d8f34b1ce50234ea93c6072bb5c4290aa64e4bb479aa07ba 6911 seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo dd18266d2f9f280b4e38a839413be87050314d9863b48dec1c9e4af5cce162c9 239888 seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb Files: 0ffa1a9b4b166c00032531b506953f9b 5657920 debug optional seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb 581fdd99d668add554e1ad5fb00e672f 111164 doc optional seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb 2a305e5b7d5634b1fe9841fcb7005f2e 6911 science optional seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo d73d57c1107184917e4ec3e8de61ccad 239888 science optional seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb Sat Apr 8 13:03:14 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/seqan-needle_1.0.1.0.0.git.3011926+ds-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/seqan-needle_1.0.1.0.0.git.3011926+ds-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/seqan-needle_1.0.1.0.0.git.3011926+ds-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/b1/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/b2/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 3.362s) 3.362s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.263s) 0.262s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sat Apr 8 13:03:18 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Sat Apr 8 13:03:18 UTC 2023 I: seqan-needle from bookworm built successfully and reproducibly on arm64. Sat Apr 8 13:03:19 UTC 2023 I: Submitting .buildinfo files to external archives: Sat Apr 8 13:03:19 UTC 2023 I: Submitting 8.0K b1/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo.asc Sat Apr 8 13:03:20 UTC 2023 I: Submitting 8.0K b2/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo.asc Sat Apr 8 13:03:21 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Apr 8 13:03:21 UTC 2023 I: Done submitting .buildinfo files. Sat Apr 8 13:03:21 UTC 2023 I: Removing signed seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo.asc files: removed './b1/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo.asc' removed './b2/seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo.asc'