Thu Apr 13 00:59:00 UTC 2023 I: starting to build python-biom-format/bookworm/arm64 on jenkins on '2023-04-13 00:58' Thu Apr 13 00:59:00 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_5/24612/console.log Thu Apr 13 00:59:00 UTC 2023 I: Downloading source for bookworm/python-biom-format=2.1.12-3 --2023-04-13 00:59:00-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/python-biom-format/python-biom-format_2.1.12-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2452 (2.4K) [text/prs.lines.tag] Saving to: ‘python-biom-format_2.1.12-3.dsc’ 0K .. 100% 167M=0s 2023-04-13 00:59:00 (167 MB/s) - ‘python-biom-format_2.1.12-3.dsc’ saved [2452/2452] Thu Apr 13 00:59:00 UTC 2023 I: python-biom-format_2.1.12-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-biom-format Binary: python3-biom-format, python-biom-format-doc Architecture: any all Version: 2.1.12-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://biom-format.org/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/python-biom-format Vcs-Git: https://salsa.debian.org/med-team/python-biom-format.git Testsuite: autopkgtest, autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest , python3-pytest-cov Package-List: python-biom-format-doc deb doc optional arch=all python3-biom-format deb python optional arch=any Checksums-Sha1: 8d99b8bd29ebb45f9e16e4468bc897bcfb31e4b0 8553928 python-biom-format_2.1.12.orig.tar.xz fb2403a6023921ff4336fa453320aab879bd8737 10852 python-biom-format_2.1.12-3.debian.tar.xz Checksums-Sha256: 071dba4520bbf795ef23a1817ff71a799025178402eaf09fbb39349e3560b582 8553928 python-biom-format_2.1.12.orig.tar.xz f0758a1cd4de8474322daf2f9f16f670438435c0a8c253612ec61fcc91e9acfa 10852 python-biom-format_2.1.12-3.debian.tar.xz Files: f6efbe871d8f2403b87606cc14667ef0 8553928 python-biom-format_2.1.12.orig.tar.xz a89d6072f0501bfe933ccb174e88e2bc 10852 python-biom-format_2.1.12-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmOLoTYWHGVtb2xsaWVy QGVtbHdrczk5OS5ldQAKCRB5PPZ+jw0R2jxYD/9rcYn68PXzkgk9/cuV8GDowQbs W38yierhRZ0sbHf3tgdvoYJvurRPJwFgsKxNf/nLHel7L9Bdoj7E1efKVPkLhvoh OO1dfEOJOi05UnXekOX3uvn8R5iHvRUbNOzg7BgmmaaIpL9lZqlVJjLfWoq73Wc2 aodP8DIuwUBnMQCBlMNElJd9ybF/woBCTyNjJSe3B1Hi2SROAVRdz5yjXq8v9eu/ xTX9aTfLu3K9MGAvtNZpnSC40OpkyJNJafJ8iRkBvMXNimz1wkmuSRjj60LSAp1K go1FqJi7v5Q8bp3ssvGh1MjCX4nb2v2vBkjZJdKnGUCwfV/qYHEwc0mhqloPanGl Pi1x39CUWthDktgHJpKALxXG5d9czl8xiGxexqncyEZ010KXvbjxTAehvXiqoUTR zlvMg1dp/OsRRZ02njsgQsAeN3v/u6pcw5D/Y2H1ziQfuHP99S0IOvQPcbxLftU+ 1J/5Ju8aUbT9FtWR4F5FBlORGm3Dq3bfcF/A/+K4BCMVZSneVlTM2UNz1hMoSJS7 YVhTEDHHloK3KPHWfaYvG+aQpG/PaED51FKz4tN4OtZbT/mc2h0pISvbtv/EUoW9 rq5WsTQO+XUtkwPQzQOyjm7tzQOx2t9bILA+AMJ9iDIEHUDjhGiRxRRFZUOu/fz3 Ijt67Q5rIUHZNVfQkw== =3JWB -----END PGP SIGNATURE----- Thu Apr 13 00:59:00 UTC 2023 I: Checking whether the package is not for us Thu Apr 13 00:59:00 UTC 2023 I: Starting 1st build on remote node codethink10-arm64.debian.net. Thu Apr 13 00:59:00 UTC 2023 I: Preparing to do remote build '1' on codethink10-arm64.debian.net. Thu Apr 13 01:04:15 UTC 2023 I: Deleting $TMPDIR on codethink10-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Apr 12 12:59:08 -12 2023 I: pbuilder-time-stamp: 1681347548 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-biom-format_2.1.12-3.dsc] I: copying [./python-biom-format_2.1.12.orig.tar.xz] I: copying [./python-biom-format_2.1.12-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 3 07:19:18 2022 -12 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@emlwks999.eu" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-biom-format_2.1.12-3.dsc: no acceptable signature found dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.12 dpkg-source: info: unpacking python-biom-format_2.1.12.orig.tar.xz dpkg-source: info: unpacking python-biom-format_2.1.12-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying enable_sloppy_sphinx_build.patch dpkg-source: info: applying sphinx_1.6.patch dpkg-source: info: applying sphinx.ext.pngmath.patch dpkg-source: info: applying posix_shell.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/4612/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='4612' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/pbuilderrc_2VGP --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/b1 --logfile b1/build.log python-biom-format_2.1.12-3.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink10-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 10 22:26 /bin -> usr/bin I: user script /srv/workspace/pbuilder/4612/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-future; however: Package python3-future is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcurl4{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-hl-100{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblocale-gettext-perl{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libopenjp2-7{a} libpipeline1{a} libpng16-16{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxsimd-dev{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} openssl{a} po-debconf{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-babel{a} python3-beniget{a} python3-brotli{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-future{a} python3-gast{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-jinja2{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-ply{a} python3-py{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-pythran{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sympy{a} python3-tk{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 202 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After unpacking 720 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 liblocale-gettext-perl arm64 1.07-5 [15.1 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-minimal arm64 3.11.2-6 [806 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 python3.11-minimal arm64 3.11.2-6 [1858 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 python3-minimal arm64 3.11.2-1+b1 [26.3 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 media-types all 10.0.0 [26.1 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 readline-common all 8.2-1.3 [69.0 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 libreadline8 arm64 8.2-1.3 [155 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-stdlib arm64 3.11.2-6 [1747 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 python3.11 arm64 3.11.2-6 [572 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 libpython3-stdlib arm64 3.11.2-1+b1 [9296 B] Get: 14 http://deb.debian.org/debian bookworm/main arm64 python3 arm64 3.11.2-1+b1 [26.3 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 sgml-base all 1.31 [15.4 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 bash-completion all 1:2.11-6 [234 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 openssl arm64 3.0.8-1 [1373 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 ca-certificates all 20230311 [153 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [973 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libpng16-16 arm64 1.6.39-2 [269 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libfreetype6 arm64 2.12.1+dfsg-4 [369 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 fontconfig-config arm64 2.14.1-4 [315 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libfontconfig1 arm64 2.14.1-4 [381 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 libbsd0 arm64 0.11.7-2 [115 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 libxcb1 arm64 1.15-1 [143 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 libx11-data all 2:1.8.4-2 [292 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 libx11-6 arm64 2:1.8.4-2 [736 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 libxrender1 arm64 1:0.9.10-1.1 [32.0 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 libxft2 arm64 2.3.6-1 [58.7 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 x11-common all 1:7.7+23 [252 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 libxss1 arm64 1:1.2.3-1 [17.8 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 libtk8.6 arm64 8.6.13-2 [729 kB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-4.1 [540 kB] Get: 54 http://deb.debian.org/debian bookworm/main arm64 blt arm64 2.5.3+dfsg-4.1 [14.9 kB] Get: 55 http://deb.debian.org/debian bookworm/main arm64 cython3 arm64 0.29.32-2+b1 [1223 kB] Get: 56 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 57 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 58 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 59 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 60 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 61 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 62 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 63 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 64 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 65 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 66 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.1+b3 [619 kB] Get: 67 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 68 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 69 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 70 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 71 http://deb.debian.org/debian bookworm/main arm64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 72 http://deb.debian.org/debian bookworm/main arm64 python3-distutils all 3.11.2-2 [131 kB] Get: 73 http://deb.debian.org/debian bookworm/main arm64 dh-python all 5.20230130 [104 kB] Get: 74 http://deb.debian.org/debian bookworm/main arm64 xml-core all 0.18+nmu1 [23.8 kB] Get: 75 http://deb.debian.org/debian bookworm/main arm64 docutils-common all 0.19+dfsg-6 [127 kB] Get: 76 http://deb.debian.org/debian bookworm/main arm64 fonts-lyx all 2.3.7-1 [186 kB] Get: 77 http://deb.debian.org/debian bookworm/main arm64 help2man arm64 1.49.3 [198 kB] Get: 78 http://deb.debian.org/debian bookworm/main arm64 libaec0 arm64 1.0.6-1+b1 [19.9 kB] Get: 79 http://deb.debian.org/debian bookworm/main arm64 libblas3 arm64 3.11.0-2 [91.4 kB] Get: 80 http://deb.debian.org/debian bookworm/main arm64 libboost1.74-dev arm64 1.74.0+ds1-20 [9510 kB] Get: 81 http://deb.debian.org/debian bookworm/main arm64 libboost-dev arm64 1.74.0.3 [4548 B] Get: 82 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 83 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 84 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 85 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 86 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 87 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 88 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 89 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-7 [361 kB] Get: 90 http://deb.debian.org/debian bookworm/main arm64 libdeflate0 arm64 1.14-1 [54.3 kB] Get: 91 http://deb.debian.org/debian bookworm/main arm64 libexpat1-dev arm64 2.5.0-1 [135 kB] Get: 92 http://deb.debian.org/debian bookworm/main arm64 libfribidi0 arm64 1.0.8-2.1 [64.9 kB] Get: 93 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB] Get: 94 http://deb.debian.org/debian bookworm/main arm64 libglib2.0-0 arm64 2.74.6-1 [1311 kB] Get: 95 http://deb.debian.org/debian bookworm/main arm64 libgraphite2-3 arm64 1.3.14-1 [75.6 kB] Get: 96 http://deb.debian.org/debian bookworm/main arm64 libharfbuzz0b arm64 6.0.0+dfsg-3 [1914 kB] Get: 97 http://deb.debian.org/debian bookworm/main arm64 libsz2 arm64 1.0.6-1+b1 [7740 B] Get: 98 http://deb.debian.org/debian bookworm/main arm64 libhdf5-103-1 arm64 1.10.8+repack1-1 [1037 kB] Get: 99 http://deb.debian.org/debian bookworm/main arm64 libhdf5-hl-100 arm64 1.10.8+repack1-1 [64.0 kB] Get: 100 http://deb.debian.org/debian bookworm/main arm64 libimagequant0 arm64 2.17.0-1 [31.3 kB] Get: 101 http://deb.debian.org/debian bookworm/main arm64 libjbig0 arm64 2.1-6.1 [30.0 kB] Get: 102 http://deb.debian.org/debian bookworm/main arm64 libjpeg62-turbo arm64 1:2.1.5-2 [171 kB] Get: 103 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get: 104 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-metadata all 12-4 [6532 B] Get: 105 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB] Get: 106 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get: 107 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 108 http://deb.debian.org/debian bookworm/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 109 http://deb.debian.org/debian bookworm/main arm64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 110 http://deb.debian.org/debian bookworm/main arm64 libjson-perl all 4.10000-1 [87.5 kB] Get: 111 http://deb.debian.org/debian bookworm/main arm64 libopenblas0-pthread arm64 0.3.21+ds-4 [4532 kB] Get: 112 http://deb.debian.org/debian bookworm/main arm64 liblapack3 arm64 3.11.0-2 [1664 kB] Get: 113 http://deb.debian.org/debian bookworm/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [24.9 kB] Get: 114 http://deb.debian.org/debian bookworm/main arm64 liblcms2-2 arm64 2.14-2 [143 kB] Get: 115 http://deb.debian.org/debian bookworm/main arm64 liblerc4 arm64 4.0.0+ds-2 [138 kB] Get: 116 http://deb.debian.org/debian bookworm/main arm64 liblzf1 arm64 3.6-3 [9860 B] Get: 117 http://deb.debian.org/debian bookworm/main arm64 libopenblas0 arm64 0.3.21+ds-4 [32.6 kB] Get: 118 http://deb.debian.org/debian bookworm/main arm64 libopenblas-pthread-dev arm64 0.3.21+ds-4 [3169 kB] Get: 119 http://deb.debian.org/debian bookworm/main arm64 libopenblas-dev arm64 0.3.21+ds-4 [44.9 kB] Get: 120 http://deb.debian.org/debian bookworm/main arm64 libopenjp2-7 arm64 2.5.0-1+b1 [176 kB] Get: 121 http://deb.debian.org/debian bookworm/main arm64 libpython3.11 arm64 3.11.2-6 [1841 kB] Get: 122 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Get: 123 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-dev arm64 3.11.2-6 [4395 kB] Get: 124 http://deb.debian.org/debian bookworm/main arm64 libpython3-dev arm64 3.11.2-1+b1 [9564 B] Get: 125 http://deb.debian.org/debian bookworm/main arm64 libpython3-all-dev arm64 3.11.2-1+b1 [1068 B] Get: 126 http://deb.debian.org/debian bookworm/main arm64 libqhull-r8.0 arm64 2020.2-5 [230 kB] Get: 127 http://deb.debian.org/debian bookworm/main arm64 libraqm0 arm64 0.7.0-4.1 [10.4 kB] Get: 128 http://deb.debian.org/debian bookworm/main arm64 libwebp7 arm64 1.2.4-0.1 [259 kB] Get: 129 http://deb.debian.org/debian bookworm/main arm64 libtiff6 arm64 4.5.0-5 [300 kB] Get: 130 http://deb.debian.org/debian bookworm/main arm64 libwebpdemux2 arm64 1.2.4-0.1 [99.1 kB] Get: 131 http://deb.debian.org/debian bookworm/main arm64 libwebpmux3 arm64 1.2.4-0.1 [109 kB] Get: 132 http://deb.debian.org/debian bookworm/main arm64 libxsimd-dev arm64 8.1.0-7 [88.8 kB] Get: 133 http://deb.debian.org/debian bookworm/main arm64 libxslt1.1 arm64 1.1.35-1 [231 kB] Get: 134 http://deb.debian.org/debian bookworm/main arm64 python-babel-localedata all 2.10.3-1 [5615 kB] Get: 135 http://deb.debian.org/debian bookworm/main arm64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 136 http://deb.debian.org/debian bookworm/main arm64 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 137 http://deb.debian.org/debian bookworm/main arm64 python3-all arm64 3.11.2-1+b1 [1064 B] Get: 138 http://deb.debian.org/debian bookworm/main arm64 python3.11-dev arm64 3.11.2-6 [617 kB] Get: 139 http://deb.debian.org/debian bookworm/main arm64 python3-dev arm64 3.11.2-1+b1 [26.2 kB] Get: 140 http://deb.debian.org/debian bookworm/main arm64 python3-all-dev arm64 3.11.2-1+b1 [1076 B] Get: 141 http://deb.debian.org/debian bookworm/main arm64 python3-appdirs all 1.4.4-3 [13.0 kB] Get: 142 http://deb.debian.org/debian bookworm/main arm64 python3-attr all 22.2.0-1 [65.4 kB] Get: 143 http://deb.debian.org/debian bookworm/main arm64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 144 http://deb.debian.org/debian bookworm/main arm64 python3-tz all 2022.7.1-1 [32.1 kB] Get: 145 http://deb.debian.org/debian bookworm/main arm64 python3-babel all 2.10.3-1 [103 kB] Get: 146 http://deb.debian.org/debian bookworm/main arm64 python3-gast all 0.5.2-2 [9364 B] Get: 147 http://deb.debian.org/debian bookworm/main arm64 python3-beniget all 0.4.1-3 [9920 B] Get: 148 http://deb.debian.org/debian bookworm/main arm64 python3-brotli arm64 1.0.9-2+b6 [281 kB] Get: 149 http://deb.debian.org/debian bookworm/main arm64 python3-certifi all 2022.9.24-1 [153 kB] Get: 150 http://deb.debian.org/debian bookworm/main arm64 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get: 151 http://deb.debian.org/debian bookworm/main arm64 python3-charset-normalizer all 3.0.1-2 [49.3 kB] Get: 152 http://deb.debian.org/debian bookworm/main arm64 python3-colorama all 0.4.6-2 [36.8 kB] Get: 153 http://deb.debian.org/debian bookworm/main arm64 python3-click all 8.1.3-2 [92.2 kB] Get: 154 http://deb.debian.org/debian bookworm/main arm64 python3-numpy arm64 1:1.24.2-1 [4751 kB] Get: 155 http://deb.debian.org/debian bookworm/main arm64 python3-contourpy arm64 1.0.7-1+b1 [154 kB] Get: 156 http://deb.debian.org/debian bookworm/main arm64 python3-coverage arm64 6.5.0+dfsg1-2+b1 [153 kB] Get: 157 http://deb.debian.org/debian bookworm/main arm64 python3-cycler all 0.11.0-1 [8020 B] Get: 158 http://deb.debian.org/debian bookworm/main arm64 python3-six all 1.16.0-4 [17.5 kB] Get: 159 http://deb.debian.org/debian bookworm/main arm64 python3-dateutil all 2.8.2-2 [78.3 kB] Get: 160 http://deb.debian.org/debian bookworm/main arm64 python3-decorator all 5.1.1-3 [14.9 kB] Get: 161 http://deb.debian.org/debian bookworm/main arm64 python3-roman all 3.3-3 [9880 B] Get: 162 http://deb.debian.org/debian bookworm/main arm64 python3-docutils all 0.19+dfsg-6 [382 kB] Get: 163 http://deb.debian.org/debian bookworm/main arm64 python3-ply all 3.11-5 [65.8 kB] Get: 164 http://deb.debian.org/debian bookworm/main arm64 python3-pythran arm64 0.11.0+ds-7 [427 kB] Get: 165 http://deb.debian.org/debian bookworm/main arm64 python3-scipy arm64 1.10.1-2 [14.2 MB] Get: 166 http://deb.debian.org/debian bookworm/main arm64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get: 167 http://deb.debian.org/debian bookworm/main arm64 python3-mpmath all 1.2.1-2 [418 kB] Get: 168 http://deb.debian.org/debian bookworm/main arm64 python3-sympy all 1.11.1-1 [4358 kB] Get: 169 http://deb.debian.org/debian bookworm/main arm64 python3-fs all 2.4.16-2 [95.2 kB] Get: 170 http://deb.debian.org/debian bookworm/main arm64 python3-lxml arm64 4.9.2-1+b1 [1074 kB] Get: 171 http://deb.debian.org/debian bookworm/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b2 [25.0 kB] Get: 172 http://deb.debian.org/debian bookworm/main arm64 unicode-data all 15.0.0-1 [7984 kB] Get: 173 http://deb.debian.org/debian bookworm/main arm64 python3-fonttools arm64 4.38.0-1+b1 [990 kB] Get: 174 http://deb.debian.org/debian bookworm/main arm64 python3-future all 0.18.2-6 [348 kB] Get: 175 http://deb.debian.org/debian bookworm/main arm64 python3-h5py-serial arm64 3.7.0-8 [734 kB] Get: 176 http://deb.debian.org/debian bookworm/main arm64 python3-h5py all 3.7.0-8 [10.3 kB] Get: 177 http://deb.debian.org/debian bookworm/main arm64 python3-idna all 3.3-1 [39.4 kB] Get: 178 http://deb.debian.org/debian bookworm/main arm64 python3-imagesize all 1.4.1-1 [6688 B] Get: 179 http://deb.debian.org/debian bookworm/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 180 http://deb.debian.org/debian bookworm/main arm64 python3-markupsafe arm64 2.1.2-1+b1 [13.3 kB] Get: 181 http://deb.debian.org/debian bookworm/main arm64 python3-jinja2 all 3.1.2-1 [119 kB] Get: 182 http://deb.debian.org/debian bookworm/main arm64 python3-kiwisolver arm64 1.4.4-1+b1 [55.4 kB] Get: 183 http://deb.debian.org/debian bookworm/main arm64 python3-pil arm64 9.4.0-1.1+b1 [452 kB] Get: 184 http://deb.debian.org/debian bookworm/main arm64 python3-tk arm64 3.11.2-2 [97.7 kB] Get: 185 http://deb.debian.org/debian bookworm/main arm64 python3-pil.imagetk arm64 9.4.0-1.1+b1 [74.4 kB] Get: 186 http://deb.debian.org/debian bookworm/main arm64 python3-pyparsing all 3.0.9-1 [138 kB] Get: 187 http://deb.debian.org/debian bookworm/main arm64 python3-packaging all 23.0-1 [32.5 kB] Get: 188 http://deb.debian.org/debian bookworm/main arm64 python3-matplotlib arm64 3.6.3-1+b1 [6774 kB] Get: 189 http://deb.debian.org/debian bookworm/main arm64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 190 http://deb.debian.org/debian bookworm/main arm64 python3-pandas-lib arm64 1.5.3+dfsg-2 [3048 kB] Get: 191 http://deb.debian.org/debian bookworm/main arm64 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get: 192 http://deb.debian.org/debian bookworm/main arm64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 193 http://deb.debian.org/debian bookworm/main arm64 python3-py all 1.11.0-1 [89.2 kB] Get: 194 http://deb.debian.org/debian bookworm/main arm64 python3-pygments all 2.14.0+dfsg-1 [783 kB] Get: 195 http://deb.debian.org/debian bookworm/main arm64 python3-pytest all 7.2.1-2 [236 kB] Get: 196 http://deb.debian.org/debian bookworm/main arm64 python3-pytest-cov all 4.0.0-1 [26.1 kB] Get: 197 http://deb.debian.org/debian bookworm/main arm64 python3-urllib3 all 1.26.12-1 [117 kB] Get: 198 http://deb.debian.org/debian bookworm/main arm64 python3-requests all 2.28.1+dfsg-1 [67.9 kB] Get: 199 http://deb.debian.org/debian bookworm/main arm64 python3-setuptools all 66.1.1-1 [521 kB] Get: 200 http://deb.debian.org/debian bookworm/main arm64 python3-snowballstemmer all 2.2.0-2 [57.8 kB] Get: 201 http://deb.debian.org/debian bookworm/main arm64 sphinx-common all 5.3.0-4 [653 kB] Get: 202 http://deb.debian.org/debian bookworm/main arm64 python3-sphinx all 5.3.0-4 [549 kB] Fetched 133 MB in 5s (25.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libjs-jquery. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../0-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-hotkeys. Preparing to unpack .../1-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../2-liblocale-gettext-perl_1.07-5_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../3-libpython3.11-minimal_3.11.2-6_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.2-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../4-libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../5-python3.11-minimal_3.11.2-6_arm64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:arm64 (3.11.2-6) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19972 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_arm64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../3-libreadline8_8.2-1.3_arm64.deb ... Unpacking libreadline8:arm64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_arm64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20406 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.2-1+b1_arm64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... 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Selecting previously unselected package python3-all-dev. Preparing to unpack .../126-python3-all-dev_3.11.2-1+b1_arm64.deb ... Unpacking python3-all-dev (3.11.2-1+b1) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../127-python3-appdirs_1.4.4-3_all.deb ... Unpacking python3-appdirs (1.4.4-3) ... Selecting previously unselected package python3-attr. Preparing to unpack .../128-python3-attr_22.2.0-1_all.deb ... Unpacking python3-attr (22.2.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../129-python3-pkg-resources_66.1.1-1_all.deb ... Unpacking python3-pkg-resources (66.1.1-1) ... Selecting previously unselected package python3-tz. Preparing to unpack .../130-python3-tz_2022.7.1-1_all.deb ... Unpacking python3-tz (2022.7.1-1) ... Selecting previously unselected package python3-babel. Preparing to unpack .../131-python3-babel_2.10.3-1_all.deb ... Unpacking python3-babel (2.10.3-1) ... Selecting previously unselected package python3-gast. Preparing to unpack .../132-python3-gast_0.5.2-2_all.deb ... Unpacking python3-gast (0.5.2-2) ... Selecting previously unselected package python3-beniget. Preparing to unpack .../133-python3-beniget_0.4.1-3_all.deb ... Unpacking python3-beniget (0.4.1-3) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../134-python3-brotli_1.0.9-2+b6_arm64.deb ... Unpacking python3-brotli (1.0.9-2+b6) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../135-python3-certifi_2022.9.24-1_all.deb ... Unpacking python3-certifi (2022.9.24-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../136-python3-chardet_5.1.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.1.0+dfsg-2) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../137-python3-charset-normalizer_3.0.1-2_all.deb ... Unpacking python3-charset-normalizer (3.0.1-2) ... Selecting previously unselected package python3-colorama. Preparing to unpack .../138-python3-colorama_0.4.6-2_all.deb ... Unpacking python3-colorama (0.4.6-2) ... Selecting previously unselected package python3-click. Preparing to unpack .../139-python3-click_8.1.3-2_all.deb ... Unpacking python3-click (8.1.3-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../140-python3-numpy_1%3a1.24.2-1_arm64.deb ... Unpacking python3-numpy (1:1.24.2-1) ... Selecting previously unselected package python3-contourpy. Preparing to unpack .../141-python3-contourpy_1.0.7-1+b1_arm64.deb ... Unpacking python3-contourpy (1.0.7-1+b1) ... Selecting previously unselected package python3-coverage. Preparing to unpack .../142-python3-coverage_6.5.0+dfsg1-2+b1_arm64.deb ... Unpacking python3-coverage (6.5.0+dfsg1-2+b1) ... Selecting previously unselected package python3-cycler. 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Preparing to unpack .../161-python3-h5py-serial_3.7.0-8_arm64.deb ... Unpacking python3-h5py-serial (3.7.0-8) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../162-python3-h5py_3.7.0-8_all.deb ... Unpacking python3-h5py (3.7.0-8) ... Selecting previously unselected package python3-idna. Preparing to unpack .../163-python3-idna_3.3-1_all.deb ... Unpacking python3-idna (3.3-1) ... Selecting previously unselected package python3-imagesize. Preparing to unpack .../164-python3-imagesize_1.4.1-1_all.deb ... Unpacking python3-imagesize (1.4.1-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../165-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-markupsafe. Preparing to unpack .../166-python3-markupsafe_2.1.2-1+b1_arm64.deb ... Unpacking python3-markupsafe (2.1.2-1+b1) ... Selecting previously unselected package python3-jinja2. Preparing to unpack .../167-python3-jinja2_3.1.2-1_all.deb ... Unpacking python3-jinja2 (3.1.2-1) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../168-python3-kiwisolver_1.4.4-1+b1_arm64.deb ... Unpacking python3-kiwisolver (1.4.4-1+b1) ... Selecting previously unselected package python3-pil:arm64. Preparing to unpack .../169-python3-pil_9.4.0-1.1+b1_arm64.deb ... Unpacking python3-pil:arm64 (9.4.0-1.1+b1) ... Selecting previously unselected package python3-tk:arm64. Preparing to unpack .../170-python3-tk_3.11.2-2_arm64.deb ... Unpacking python3-tk:arm64 (3.11.2-2) ... Selecting previously unselected package python3-pil.imagetk:arm64. Preparing to unpack .../171-python3-pil.imagetk_9.4.0-1.1+b1_arm64.deb ... Unpacking python3-pil.imagetk:arm64 (9.4.0-1.1+b1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../172-python3-pyparsing_3.0.9-1_all.deb ... Unpacking python3-pyparsing (3.0.9-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../173-python3-packaging_23.0-1_all.deb ... Unpacking python3-packaging (23.0-1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../174-python3-matplotlib_3.6.3-1+b1_arm64.deb ... Unpacking python3-matplotlib (3.6.3-1+b1) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../175-python3-more-itertools_8.10.0-2_all.deb ... Unpacking python3-more-itertools (8.10.0-2) ... Selecting previously unselected package python3-pandas-lib:arm64. Preparing to unpack .../176-python3-pandas-lib_1.5.3+dfsg-2_arm64.deb ... Unpacking python3-pandas-lib:arm64 (1.5.3+dfsg-2) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../177-python3-pandas_1.5.3+dfsg-2_all.deb ... Unpacking python3-pandas (1.5.3+dfsg-2) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../178-python3-pluggy_1.0.0+repack-1_all.deb ... Unpacking python3-pluggy (1.0.0+repack-1) ... Selecting previously unselected package python3-py. Preparing to unpack .../179-python3-py_1.11.0-1_all.deb ... Unpacking python3-py (1.11.0-1) ... Selecting previously unselected package python3-pygments. Preparing to unpack .../180-python3-pygments_2.14.0+dfsg-1_all.deb ... Unpacking python3-pygments (2.14.0+dfsg-1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../181-python3-pytest_7.2.1-2_all.deb ... Unpacking python3-pytest (7.2.1-2) ... Selecting previously unselected package python3-pytest-cov. Preparing to unpack .../182-python3-pytest-cov_4.0.0-1_all.deb ... Unpacking python3-pytest-cov (4.0.0-1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../183-python3-urllib3_1.26.12-1_all.deb ... Unpacking python3-urllib3 (1.26.12-1) ... Selecting previously unselected package python3-requests. Preparing to unpack .../184-python3-requests_2.28.1+dfsg-1_all.deb ... Unpacking python3-requests (2.28.1+dfsg-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../185-python3-setuptools_66.1.1-1_all.deb ... Unpacking python3-setuptools (66.1.1-1) ... Selecting previously unselected package python3-snowballstemmer. Preparing to unpack .../186-python3-snowballstemmer_2.2.0-2_all.deb ... Unpacking python3-snowballstemmer (2.2.0-2) ... Selecting previously unselected package sphinx-common. Preparing to unpack .../187-sphinx-common_5.3.0-4_all.deb ... Unpacking sphinx-common (5.3.0-4) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../188-python3-sphinx_5.3.0-4_all.deb ... Unpacking python3-sphinx (5.3.0-4) ... Setting up media-types (10.0.0) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libgraphite2-3:arm64 (1.3.14-1) ... Setting up liblcms2-2:arm64 (2.14-2) ... Setting up libxau6:arm64 (1:1.0.9-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libboost1.74-dev:arm64 (1.74.0+ds1-20) ... Setting up libicu72:arm64 (72.1-3) ... Setting up liblerc4:arm64 (4.0.0+ds-2) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.74.6-1) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.7-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up libdeflate0:arm64 (1.14-1) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libqhull-r8.0:arm64 (2020.2-5) ... Setting up file (1:5.44-3) ... Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... Setting up libjbig0:arm64 (2.1-6.1) ... Setting up libaec0:arm64 (1.0.6-1+b1) ... Setting up python-babel-localedata (2.10.3-1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up unicode-data (15.0.0-1) ... Setting up libxsimd-dev:arm64 (8.1.0-7) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:arm64 (3.11.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.5.0-1) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up bash-completion (1:2.11-6) ... Setting up liblzf1:arm64 (3.6-3) ... Setting up libfribidi0:arm64 (1.0.8-2.1) ... Setting up libimagequant0:arm64 (2.17.0-1) ... Setting up libpng16-16:arm64 (1.6.39-2) ... Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... Setting up autopoint (0.21-12) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up libgfortran5:arm64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:arm64 (1.2.4-0.1) ... Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:arm64 (4.5.0-5) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:arm64 (2.5.0-1+b1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up sgml-base (1.31) ... Setting up libboost-dev:arm64 (1.74.0.3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up openssl (3.0.8-1) ... Setting up libwebpmux3:arm64 (1.2.4-0.1) ... Setting up libbsd0:arm64 (0.11.7-2) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.1+b3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up libsz2:arm64 (1.0.6-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up liblapack3:arm64 (3.11.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libopenblas0-pthread:arm64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/aarch64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-aarch64-linux-gnu) in auto mode Setting up libtool (2.4.7-5) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libwebpdemux2:arm64 (1.2.4-0.1) ... Setting up libreadline8:arm64 (8.2-1.3) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:arm64 (2.12.1+dfsg-4) ... Setting up libjs-jquery-metadata (12-4) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... Setting up libopenblas0:arm64 (0.3.21+ds-4) ... Setting up groff-base (1.22.4-10) ... Setting up xml-core (0.18+nmu1) ... Setting up libxslt1.1:arm64 (1.1.35-1) ... Setting up libcurl4:arm64 (7.88.1-7) ... Setting up libx11-6:arm64 (2:1.8.4-2) ... Setting up libharfbuzz0b:arm64 (6.0.0+dfsg-3) ... Setting up libfontconfig1:arm64 (2.14.1-4) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1) ... Setting up libopenblas-pthread-dev:arm64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/aarch64-linux-gnu/libopenblas.so (libopenblas.so-aarch64-linux-gnu) in auto mode Setting up libxrender1:arm64 (1:0.9.10-1.1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.2-6) ... Setting up libxext6:arm64 (2:1.3.4-1+b1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libopenblas-dev:arm64 (0.3.21+ds-4) ... Setting up libraqm0:arm64 (0.7.0-4.1) ... Setting up sphinx-common (5.3.0-4) ... Setting up libhdf5-103-1:arm64 (1.10.8+repack1-1) ... Setting up libxss1:arm64 (1:1.2.3-1) ... Setting up libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:arm64 (1.10.8+repack1-1) ... Setting up python3.11 (3.11.2-6) ... Setting up libxft2:arm64 (2.3.6-1) ... Setting up libpython3.11:arm64 (3.11.2-6) ... Setting up libtk8.6:arm64 (8.6.13-2) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-markupsafe (2.1.2-1+b1) ... Setting up python3-tz (2022.7.1-1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-3) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-packaging (23.0-1) ... Setting up python3-pyparsing (3.0.9-1) ... Setting up python3-certifi (2022.9.24-1) ... Setting up python3-snowballstemmer (2.2.0-2) ... Setting up libpython3.11-dev:arm64 (3.11.2-6) ... Setting up python3-brotli (1.0.9-2+b6) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-kiwisolver (1.4.4-1+b1) ... Setting up python3-idna (3.3-1) ... Setting up cython3 (0.29.32-2+b1) ... Setting up python3-urllib3 (1.26.12-1) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up python3-lxml:arm64 (4.9.2-1+b1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.11.1-1) ... Setting up python3-attr (22.2.0-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up libpython3-dev:arm64 (3.11.2-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-py (1.11.0-1) ... Setting up python3-babel (2.10.3-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.6-2) ... Setting up python3-lz4 (4.0.2+dfsg-1+b2) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-charset-normalizer (3.0.1-2) ... Setting up python3-pytest (7.2.1-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-coverage (6.5.0+dfsg1-2+b1) ... Setting up python3-tk:arm64 (3.11.2-2) ... Setting up python3-pytest-cov (4.0.0-1) ... Setting up python3-click (8.1.3-2) ... Setting up python3-fs (2.4.16-2) ... Setting up python3-beniget (0.4.1-3) ... Setting up python3-pygments (2.14.0+dfsg-1) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up libpython3-all-dev:arm64 (3.11.2-1+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-requests (2.28.1+dfsg-1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-contourpy (1.0.7-1+b1) ... Setting up python3-future (0.18.2-6) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-pandas-lib:arm64 (1.5.3+dfsg-2) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Setting up python3-h5py (3.7.0-8) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.10.1-2) ... Setting up python3-pil:arm64 (9.4.0-1.1+b1) ... Setting up python3-pil.imagetk:arm64 (9.4.0-1.1+b1) ... Setting up python3-ufolib2 (0.14.0+dfsg1-1) ... Setting up python3-fonttools (4.38.0-1+b1) ... Setting up python3-matplotlib (3.6.3-1+b1) ... Processing triggers for libc-bin (2.36-8) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.19+dfsg-6) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.19+dfsg-6) ... Setting up python3-sphinx (5.3.0-4) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/python-biom-format-2.1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-biom-format_2.1.12-3_source.changes dpkg-buildpackage: info: source package python-biom-format dpkg-buildpackage: info: source version 2.1.12-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Mohammed Bilal dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.11 I: pybuild base:240: python3.11 setup.py clean /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_filter.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_transform.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running clean removing '/build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.11 I: pybuild base:240: python3.11 setup.py config /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_filter.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.12/biom/_transform.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/python-biom-format-2.1.12' # arch USE_CYTHON=true dh_auto_build pybuild --build -i python{version} -p 3.11 I: pybuild base:240: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) running build running build_py creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/__init__.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/parse.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/exception.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/table.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/err.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/util.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_head.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/__init__.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/metadata_exporter.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/util.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_table.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/__init__.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_parse.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/long_lines.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_util.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_err.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data running egg_info creating biom_format.egg-info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.assets' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.assets' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.assets' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.bench_tables' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.tests.bench_tables' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.tests.bench_tables' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.test_cli.test_data' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.tests.test_cli.test_data' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.tests.test_cli.test_data' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) copying biom/_filter.pyx -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/_subsample.pyx -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/_transform.pyx -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/assets creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables creating /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data running build_ext building 'biom._filter' extension INFO: C compiler: aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build creating build/temp.linux-arm64-cpython-311 creating build/temp.linux-arm64-cpython-311/biom INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: aarch64-linux-gnu-gcc: biom/_filter.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_filter.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-cpython-311/biom/_filter.o -L/usr/lib/aarch64-linux-gnu -o /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-aarch64-linux-gnu.so building 'biom._transform' extension INFO: C compiler: aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: aarch64-linux-gnu-gcc: biom/_transform.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_transform.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-cpython-311/biom/_transform.o -L/usr/lib/aarch64-linux-gnu -o /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-aarch64-linux-gnu.so building 'biom._subsample' extension INFO: C compiler: aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: aarch64-linux-gnu-gcc: biom/_subsample.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_subsample.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-cpython-311/biom/_subsample.o -L/usr/lib/aarch64-linux-gnu -o /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-aarch64-linux-gnu.so # indep: PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html Running Sphinx v5.3.0 making output directory... done [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import biom. Possible hints: * KeyError: 'biom' * ModuleNotFoundError: No module named 'biom._filter' Failed to import biom.table. Possible hints: * KeyError: 'biom' * ModuleNotFoundError: No module named 'biom._filter' building [mo]: targets for 0 po files that are out of date building [html]: targets for 12 source files that are out of date updating environment: [new config] 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 8%] BIOM_LICENSE writing output... [ 16%] documentation/adding_metadata writing output... [ 25%] documentation/biom_conversion writing output... [ 33%] documentation/biom_format writing output... [ 41%] documentation/format_versions/biom-1.0 writing output... [ 50%] documentation/format_versions/biom-2.0 writing output... [ 58%] documentation/format_versions/biom-2.1 writing output... [ 66%] documentation/index writing output... [ 75%] documentation/quick_usage_examples writing output... [ 83%] documentation/summarizing_biom_tables writing output... [ 91%] documentation/table_objects writing output... [100%] index /build/python-biom-format-2.1.12/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.12/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.12/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.12/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated generating indices... done writing additional pages... search done copying images... [100%] _static/biom-format.png copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 6 warnings. The HTML pages are in build/html. PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man Running Sphinx v5.3.0 making output directory... done [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import biom. Possible hints: * ModuleNotFoundError: No module named 'biom._filter' * KeyError: 'biom' Failed to import biom.table. Possible hints: * ModuleNotFoundError: No module named 'biom._filter' * KeyError: 'biom' building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: [new config] 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done build succeeded, 2 warnings. The manual pages are in build/man. make[1]: Leaving directory '/build/python-biom-format-2.1.12' dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p 3.11 I: pybuild pybuild:307: cp -r /build/python-biom-format-2.1.12/examples /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build I: pybuild base:240: cd /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build; python3.11 -m pytest ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack rootdir: /build/python-biom-format-2.1.12, configfile: pytest.ini plugins: cov-4.0.0 collected 366 items biom/tests/test_err.py ..................... [ 5%] biom/tests/test_parse.py .......................... [ 12%] biom/tests/test_table.py ............................................... [ 25%] ..sss................................................................... [ 45%] ....sss................................................................. [ 65%] .............................................................. [ 81%] biom/tests/test_util.py ..s................ [ 87%] biom/tests/test_cli/test_add_metadata.py .... [ 88%] biom/tests/test_cli/test_show_install_info.py . [ 88%] biom/tests/test_cli/test_subset_table.py ..... [ 89%] biom/tests/test_cli/test_summarize_table.py .. [ 90%] biom/tests/test_cli/test_table_converter.py ...... [ 92%] biom/tests/test_cli/test_table_normalizer.py . [ 92%] biom/tests/test_cli/test_uc_processor.py ...... [ 93%] biom/tests/test_cli/test_validate_table.py ...................... [100%] =============================== warnings summary =============================== biom/tests/test_table.py:19 /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:19: FutureWarning: pandas.util.testing is deprecated. Use the functions in the public API at pandas.testing instead. import pandas.util.testing as pdt .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_both .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_obs .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_sample /usr/lib/python3/dist-packages/scipy/sparse/_index.py:146: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. self._set_arrayXarray(i, j, x) .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5 .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5 /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:4196: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. data = np.hstack(h5_data[start:end] .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5 .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5 /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:4198: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. indices = np.hstack(h5_indices[start:end] .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_nnz_issue_727 /usr/lib/python3/dist-packages/scipy/sparse/_index.py:103: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. self._set_intXint(row, col, x.flat[0]) .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:88: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append('Num samples: ' + locale.format('%d', num_samples, .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:90: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append('Num observations: ' + locale.format('%d', .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:95: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append('Total count: ' + locale.format('%d', total_count, .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:110: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append(' Min: ' + locale.format('%1.3f', min_counts, grouping=True)) .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:111: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append(' Max: ' + locale.format('%1.3f', max_counts, grouping=True)) .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:112: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append(' Median: ' + locale.format('%1.3f', median_counts, .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:114: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append(' Mean: ' + locale.format('%1.3f', mean_counts, .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:116: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append(' Std. dev.: ' + locale.format('%1.3f', .pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py: 18 warnings /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:143: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead. lines.append('%s: ' % k + locale.format('%1.3f', v, grouping=True)) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================= 359 passed, 7 skipped, 46 warnings in 21.46s ================= rm -fr -- /tmp/dh-xdg-rundir-Hc4bLHZv create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/ debian/.debhelper/generated/python-biom-format-doc/ debian/python-biom-format-doc/ rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/python-biom-format-2.1.12' dh_auto_install install -m0755 -d /build/python-biom-format-2.1.12/debian/tmp pybuild --install -i python{version} -p 3.11 --dest-dir /build/python-biom-format-2.1.12/debian/tmp I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/python-biom-format-2.1.12/debian/python3-biom-format /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.assets' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.assets' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.assets' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.bench_tables' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.tests.bench_tables' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.tests.bench_tables' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.test_cli.test_data' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'biom.tests.test_cli.test_data' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'biom.tests.test_cli.test_data' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) running build_ext running install_lib creating /build/python-biom-format-2.1.12/debian/python3-biom-format creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11 creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/sam_md.txt -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/obs_md.txt -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/parse.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/err.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/util.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/exception.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/table.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/__init__.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_api.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.pyx -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.pyx -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.pyx -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_util.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_table.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/long_lines.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_parse.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_err.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-311-pytest-7.2.1.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_err.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_util.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/long_lines.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_parse.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__init__.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli creating /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_validator.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_ids.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_head.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_converter.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/util.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/__init__.cpython-311.pyc -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_ids.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/util.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/installation_informer.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_converter.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_exporter.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_validator.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__init__.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_head.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/cli/uc_processor.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/util.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/err.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/table.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/exception.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/parse.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/python-biom-format-2.1.12/.pybuild/cpython3_3.11_biom-format/build/biom/__init__.py -> /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_err.py to test_err.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_util.py to test_util.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/long_lines.py to long_lines.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_parse.py to test_parse.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_table.py to test_table.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_ids.py to table_ids.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/util.py to util.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_converter.py to table_converter.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_validator.py to table_validator.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_head.py to table_head.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/util.py to util.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/err.py to err.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/table.py to table.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/exception.py to exception.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/parse.py to parse.cpython-311.pyc byte-compiling /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__init__.py to __init__.cpython-311.pyc running install_egg_info Copying biom_format.egg-info to /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom_format-2.1.12.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /build/python-biom-format-2.1.12/debian/python3-biom-format/usr/bin I: pybuild pybuild:333: dh_numpy3 mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars find debian/python3-biom-format -name .coverage -delete make[1]: Leaving directory '/build/python-biom-format-2.1.12' rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/python-biom-format-2.1.12' dh_installdocs --indep dh_installdocs: warning: Cannot auto-detect main package for python-biom-format-doc. If the default is wrong, please use --doc-main-package install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc cd './build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/python-biom-format-2.1.12/debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc chmod -R u\+rw,go=rX debian/python-biom-format-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/copyright install -m0755 -d debian/python-biom-format-doc/usr/share/doc-base/ install -p -m0644 debian/python-biom-format-doc.doc-base debian/python-biom-format-doc/usr/share/doc-base/python-biom-format-doc.python-biom-format dh_sphinxdoc --indep dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/copybutton.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/underscore.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/jquery.js ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/_sphinx_javascript_frameworks_compat.js ln -sf ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js rm -rf debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/.doctrees rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/.buildinfo mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars make[1]: Leaving directory '/build/python-biom-format-2.1.12' dh_installdocs -O--buildsystem=pybuild -Npython-biom-format-doc install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/copybutton.js dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -p -m0644 debian/.debhelper/generated/python3-biom-format/dh_installchangelogs.dch.trimmed debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -p -m0644 debian/.debhelper/generated/python-biom-format-doc/dh_installchangelogs.dch.trimmed debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog rm -f debian/python-biom-format-doc.debhelper.log debian/rules override_dh_installexamples make[1]: Entering directory '/build/python-biom-format-2.1.12' dh_installexamples install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples find debian -name "*.c" -delete find debian -name "*.pyx" -delete # move tests from Python3 package to examples package if [ ! -d biom/tests ] ; then \ mv `find debian/python*biom-format -name tests -type d` biom ; \ else \ find debian/python*biom-format -name tests -type d | xargs rm -rf ; \ fi make[1]: Leaving directory '/build/python-biom-format-2.1.12' dh_installman -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/share/man/man1/ install -p -m0644 ./debian/biom.1 debian/python3-biom-format/usr/share/man/man1/biom.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-biom-format/usr/share/man/man1/biom.1 mv debian/python3-biom-format/usr/share/man/man1/biom.1.dh-new debian/python3-biom-format/usr/share/man/man1/biom.1 chmod 0644 -- debian/python3-biom-format/usr/share/man/man1/biom.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:179: version: 5.20230130 D: dh_python3 dh_python3:180: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:181: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:182: supported Python versions: 3.11 (default=3.11) D: dh_python3 debhelper:149: skipping package: python-biom-format-doc D: dh_python3 debhelper:183: source=python-biom-format, binary packages=['python3-biom-format'] D: dh_python3 dh_python3:204: processing package python3-biom-format... D: dh_python3 fs:52: moving files from debian/python3-biom-format/usr/lib/python3.11/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 fs:400: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/requires.txt'}, 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.11')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-biom-format D: dh_python3 pydist:173: trying to find dependency for click (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for cython (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for cython>=0.29 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for h5py (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for numpy>=1.9.2 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for pandas>=0.20.0 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for scipy>=1.3.1 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 depends:281: D={'python3-numpy', 'python3-scipy', 'cython3', 'python3-pandas', 'python3:any', 'python3-h5py', 'python3-click', 'python3 (>= 3.11~)', 'python3 (<< 3.12)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python-biom-format-doc/usr/share/lintian/overrides install -p -m0644 debian/python-biom-format-doc.lintian-overrides debian/python-biom-format-doc/usr/share/lintian/overrides/python-biom-format-doc dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/underscore.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/jquery.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/_sphinx_javascript_frameworks_compat.js ln -s ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/_sphinx_javascript_frameworks_compat.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js ln -s ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1670091303 as canonical time Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/biom-format.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/bg-page.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_images/biom-format.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/alert_warning_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/alert_info_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/bullet_orange.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-biom-format cd debian/python-biom-format-doc chmod a-x usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian gzip -9nf usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1 cd '/build/python-biom-format-2.1.12' gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1 cd '/build/python-biom-format-2.1.12' rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/build/python-biom-format-2.1.12' dh_fixperms find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biom-format-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biom-format-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian -name exercise_cli.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/python-biom-format-2.1.12' dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug chmod 0644 -- debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d3 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d3/b8a59410aef9f118f80f34166418237774cd7a.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d3/b8a59410aef9f118f80f34166418237774cd7a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d3/b8a59410aef9f118f80f34166418237774cd7a.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c0/776456d2839babc918f5c85b7ad09f1eb4f985.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c0/776456d2839babc918f5c85b7ad09f1eb4f985.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c0/776456d2839babc918f5c85b7ad09f1eb4f985.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/1d objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/1d/d499d2635b7e5e79ff92aedb14c9998290b0e2.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/1d/d499d2635b7e5e79ff92aedb14c9998290b0e2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/1d/d499d2635b7e5e79ff92aedb14c9998290b0e2.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-biom-format/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym install -m0755 -d debian/.debhelper/python3-biom-format dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python3-biom-format/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm install -m0755 -d debian/python-biom-format-doc/DEBIAN dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN echo misc:Depends= >> debian/python3-biom-format.substvars echo misc:Pre-Depends= >> debian/python3-biom-format.substvars install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=1dd499d2635b7e5e79ff92aedb14c9998290b0e2 c0776456d2839babc918f5c85b7ad09f1eb4f985 d3b8a59410aef9f118f80f34166418237774cd7a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/python-biom-format-doc/DEBIAN echo misc:Depends= >> debian/python-biom-format-doc.substvars echo misc:Pre-Depends= >> debian/python-biom-format-doc.substvars dpkg-gencontrol -ppython-biom-format-doc -ldebian/changelog -Tdebian/python-biom-format-doc.substvars -Pdebian/python-biom-format-doc chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined chmod 0644 -- debian/python-biom-format-doc/DEBIAN/control chmod 0644 -- debian/python3-biom-format/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums install -m0755 -d debian/python-biom-format-doc/DEBIAN chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN cd debian/python-biom-format-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-biom-format-doc/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-biom-format .. dpkg-deb --root-owner-group --build debian/python-biom-format-doc .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root .. dpkg-deb: building package 'python-biom-format-doc' in '../python-biom-format-doc_2.1.12-3_all.deb'. dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.12-3_arm64.deb'. dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.12-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-biom-format_2.1.12-3_arm64.buildinfo dpkg-genchanges --build=binary -O../python-biom-format_2.1.12-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/4612 and its subdirectories I: Current time: Wed Apr 12 13:04:14 -12 2023 I: pbuilder-time-stamp: 1681347854 Thu Apr 13 01:04:16 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink9-arm64.debian.net. Thu Apr 13 01:04:16 UTC 2023 I: Preparing to do remote build '2' on codethink9-arm64.debian.net. Thu Apr 13 01:08:11 UTC 2023 I: Deleting $TMPDIR on codethink9-arm64.debian.net. Thu Apr 13 01:08:12 UTC 2023 I: python-biom-format_2.1.12-3_arm64.changes: Format: 1.8 Date: Sat, 03 Dec 2022 23:45:03 +0530 Source: python-biom-format Binary: python-biom-format-doc python3-biom-format python3-biom-format-dbgsym Architecture: all arm64 Version: 2.1.12-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Mohammed Bilal Description: python-biom-format-doc - documentation for BIOM format python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3) Closes: 1018464 Changes: python-biom-format (2.1.12-3) unstable; urgency=medium . * Team upload. * d/control: remove python3-nose (Closes: #1018464) Checksums-Sha1: db02504462f9ec815de717d7089ed0d851e859bc 65416 python-biom-format-doc_2.1.12-3_all.deb 2f4a150c3e1087ea3ffdaa2a613aa94d604e7148 11135 python-biom-format_2.1.12-3_arm64.buildinfo 0ea1e7b23ba05046d117e86e8b42d66a748fe95b 234832 python3-biom-format-dbgsym_2.1.12-3_arm64.deb aba9fe10515f91f39710b9b5ac391109ca809a6b 122420 python3-biom-format_2.1.12-3_arm64.deb Checksums-Sha256: 0fef6f19ec91ff852bcda91fd27394a650cbc1a3323509e8573d424ce49d59bb 65416 python-biom-format-doc_2.1.12-3_all.deb 47048f9d67e8a852146e6544421529d15a07c20dba35e7cf3059eba03d9bb8b0 11135 python-biom-format_2.1.12-3_arm64.buildinfo 0829a951fd6e928d67ec1485da824bf08110ac80a84e6324ddd41e892ec21a47 234832 python3-biom-format-dbgsym_2.1.12-3_arm64.deb 1da9152efe483a0ec2b4cf910dc77148e06829823608e2bcedde728baad3d546 122420 python3-biom-format_2.1.12-3_arm64.deb Files: 900b07f4e24642b6b8593efd5897743a 65416 doc optional python-biom-format-doc_2.1.12-3_all.deb caf927b3e85bc790b1a589a242e3f03f 11135 python optional python-biom-format_2.1.12-3_arm64.buildinfo 1d3527d4bfef186f9a6b2f5a4b6f1657 234832 debug optional python3-biom-format-dbgsym_2.1.12-3_arm64.deb 23a7dc469ff9fcb53924dc9bae89fd8b 122420 python optional python3-biom-format_2.1.12-3_arm64.deb Thu Apr 13 01:08:13 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/python-biom-format_2.1.12-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/python-biom-format_2.1.12-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/python-biom-format_2.1.12-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/b1/python-biom-format_2.1.12-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.e7fqxiOC/b2/python-biom-format_2.1.12-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.336s) 0.336s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.028s) 0.023s 12 calls diffoscope.comparators.binary.FilesystemFile 0.005s 10 calls abc.DotChangesFile ## specialize (total time: 0.006s) 0.006s 1 call specialize Thu Apr 13 01:08:15 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Thu Apr 13 01:08:15 UTC 2023 I: python-biom-format from bookworm built successfully and reproducibly on arm64. Thu Apr 13 01:08:16 UTC 2023 I: Submitting .buildinfo files to external archives: Thu Apr 13 01:08:16 UTC 2023 I: Submitting 12K b1/python-biom-format_2.1.12-3_arm64.buildinfo.asc Thu Apr 13 01:08:17 UTC 2023 I: Submitting 12K b2/python-biom-format_2.1.12-3_arm64.buildinfo.asc Thu Apr 13 01:08:17 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Apr 13 01:08:17 UTC 2023 I: Done submitting .buildinfo files. Thu Apr 13 01:08:17 UTC 2023 I: Removing signed python-biom-format_2.1.12-3_arm64.buildinfo.asc files: removed './b1/python-biom-format_2.1.12-3_arm64.buildinfo.asc' removed './b2/python-biom-format_2.1.12-3_arm64.buildinfo.asc'