Sat Jun 10 01:30:23 UTC 2023 I: starting to build cif2hkl/bookworm/arm64 on jenkins on '2023-06-10 01:30' Sat Jun 10 01:30:23 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_20/699/console.log Sat Jun 10 01:30:23 UTC 2023 I: Downloading source for bookworm/cif2hkl=1.4.2+ds1-1 --2023-06-10 01:30:23-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/cif2hkl/cif2hkl_1.4.2%2bds1-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1946 (1.9K) [text/prs.lines.tag] Saving to: ‘cif2hkl_1.4.2+ds1-1.dsc’ 0K . 100% 129M=0s 2023-06-10 01:30:23 (129 MB/s) - ‘cif2hkl_1.4.2+ds1-1.dsc’ saved [1946/1946] Sat Jun 10 01:30:24 UTC 2023 I: cif2hkl_1.4.2+ds1-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cif2hkl Binary: cif2hkl Architecture: any Version: 1.4.2+ds1-1 Maintainer: Debian Science Maintainers Uploaders: Emmanuel Farhi , Roland Mas Homepage: https://gitlab.com/soleil-data-treatment/soleil-software-projects/cif2hkl Standards-Version: 4.6.0 Build-Depends: debhelper-compat (= 13), fort77, gfortran, help2man Package-List: cif2hkl deb science optional arch=any Checksums-Sha1: 66b9b1d56a58ce59376c08c63003f96467f7564b 407508 cif2hkl_1.4.2+ds1.orig.tar.xz ef2efd95a444198b239e4526b5ca5501a9658c1e 3596 cif2hkl_1.4.2+ds1-1.debian.tar.xz Checksums-Sha256: 7e7388a9e9cb0363a1087563120f80dd96288b4f639aa45c1f0667ed82e5a1bf 407508 cif2hkl_1.4.2+ds1.orig.tar.xz bc1e177c496ca811ac1c7a2b931e6cc5ca7df21e72b204bc06019e1d92a7396a 3596 cif2hkl_1.4.2+ds1-1.debian.tar.xz Files: d5090c78471ce7c972c3b4e9210a0eb6 407508 cif2hkl_1.4.2+ds1.orig.tar.xz b1d2152767de942cd1a18a2d2ab4c7b5 3596 cif2hkl_1.4.2+ds1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmM0Fj8ACgkQ0w3s0lmT IvxwYg/9HH26xZ7ApDXr5Uo8QiGp0anJai7K3RHnhMttmHQQf0c2vRs4Ya+0IOGD qR1GFtGzjJX3Ln6B9eQvnGmsMPzR3Ko8lDJ4Kgr2zel/6o6YqK2GIFtEmsGXrTRM 6MwPiBjJGlhSYJnsOlMmtwQq7/gSxNHHNy7UiwMkIYujGtLBFex1ZELlzPd8jMJV rvVWO5GccW/Ut9rAlJWU5PaWC/5GRGVVv0QpeJq8tLprUev5BPp4Ya7Shwkmk9uD tvNhxU4uwNtMRrYtLdKrhqUkmwPRAOH8t/UEecy2pY38bpD2zM1EhbWA70eBsK9V B9oRDkvKc6bsQuTmKppGplp2jZPK8Uir9T7Pz+8RjZYpbMJwnZB0j0tEeemuD0pN 6tK1w9WWrp1Cjt6Orh/98jOAJo3KlH+IqtuuFK8lu+OAm7heehJVXdJuTxPEigO3 fmyIuEMgDtFYNlV7MCMvKMFwnY43ZA/Ga2qiy5wF9awQg5dO8AeyOoU/Qvcep52g BG5fcrhRCBM2OeygiPeSYk/vDiQaxWVxW2d1LTn5vC6xMwcNoD+GYrcSF5id7OMl CApWP9FKzVEERzKuZO0OgxkLJkyYeuAQ3cEys9gVH8cSpyLv5/iMa4o+zcjw2DVZ gZbnv682nOf9YU3RM6b3d5nHGjox1ffoGiDOjFoAK81ljkInZjI= =Cvxv -----END PGP SIGNATURE----- Sat Jun 10 01:30:24 UTC 2023 I: Checking whether the package is not for us Sat Jun 10 01:30:24 UTC 2023 I: Starting 1st build on remote node codethink13-arm64.debian.net. Sat Jun 10 01:30:24 UTC 2023 I: Preparing to do remote build '1' on codethink13-arm64.debian.net. Sat Jun 10 01:38:28 UTC 2023 I: Deleting $TMPDIR on codethink13-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 11 19:53:27 -12 2024 I: pbuilder-time-stamp: 1720770807 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cif2hkl_1.4.2+ds1-1.dsc] I: copying [./cif2hkl_1.4.2+ds1.orig.tar.xz] I: copying [./cif2hkl_1.4.2+ds1-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Sep 27 21:39:11 2022 -12 gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cif2hkl_1.4.2+ds1-1.dsc: no acceptable signature found dpkg-source: info: extracting cif2hkl in cif2hkl-1.4.2+ds1 dpkg-source: info: unpacking cif2hkl_1.4.2+ds1.orig.tar.xz dpkg-source: info: unpacking cif2hkl_1.4.2+ds1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Improve-layout-of-cif2hkl-help-to-make-manpage-more-.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15248/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15248' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/pbuilderrc_UASJ --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/b1 --logfile b1/build.log cif2hkl_1.4.2+ds1-1.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink13-arm64 4.15.0-212-generic #223-Ubuntu SMP Tue May 23 13:09:17 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jul 10 04:48 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15248/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), fort77, gfortran, help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19611 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on fort77; however: Package fort77 is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} f2c{a} file{a} fort77{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libf2c2{a} libf2c2-dev{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 40 newly installed, 0 to remove and 0 not upgraded. Need to get 28.4 MB of archives. After unpacking 112 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 liblocale-gettext-perl arm64 1.07-5 [15.1 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 22 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libf2c2 arm64 20140711-1 [116 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 libf2c2-dev arm64 20140711-1 [129 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 f2c arm64 20200916-1 [243 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 fort77 all 1.15-12 [7688 B] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libgfortran-12-dev arm64 12.2.0-14 [396 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 gfortran-12 arm64 12.2.0-14 [8646 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 gfortran arm64 4:12.2.0-3 [1420 B] Get: 40 http://deb.debian.org/debian bookworm/main arm64 help2man arm64 1.49.3 [198 kB] Fetched 28.4 MB in 1s (38.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19611 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../23-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../25-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libf2c2:arm64. Preparing to unpack .../31-libf2c2_20140711-1_arm64.deb ... Unpacking libf2c2:arm64 (20140711-1) ... Selecting previously unselected package libf2c2-dev:arm64. Preparing to unpack .../32-libf2c2-dev_20140711-1_arm64.deb ... Unpacking libf2c2-dev:arm64 (20140711-1) ... Selecting previously unselected package f2c. Preparing to unpack .../33-f2c_20200916-1_arm64.deb ... Unpacking f2c (20200916-1) ... Selecting previously unselected package fort77. Preparing to unpack .../34-fort77_1.15-12_all.deb ... Unpacking fort77 (1.15-12) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../35-libgfortran5_12.2.0-14_arm64.deb ... Unpacking libgfortran5:arm64 (12.2.0-14) ... Selecting previously unselected package libgfortran-12-dev:arm64. Preparing to unpack .../36-libgfortran-12-dev_12.2.0-14_arm64.deb ... Unpacking libgfortran-12-dev:arm64 (12.2.0-14) ... Selecting previously unselected package gfortran-12. Preparing to unpack .../37-gfortran-12_12.2.0-14_arm64.deb ... Unpacking gfortran-12 (12.2.0-14) ... Selecting previously unselected package gfortran. Preparing to unpack .../38-gfortran_4%3a12.2.0-3_arm64.deb ... Unpacking gfortran (4:12.2.0-3) ... Selecting previously unselected package help2man. Preparing to unpack .../39-help2man_1.49.3_arm64.deb ... Unpacking help2man (1.49.3) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-12) ... Setting up libgfortran5:arm64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libf2c2:arm64 (20140711-1) ... Setting up libf2c2-dev:arm64 (20140711-1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up f2c (20200916-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up fort77 (1.15-12) ... update-alternatives: using /usr/bin/fort77 to provide /usr/bin/f77 (f77) in auto mode Setting up libgfortran-12-dev:arm64 (12.2.0-14) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up gfortran-12 (12.2.0-14) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/cif2hkl-1.4.2+ds1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cif2hkl_1.4.2+ds1-1_source.changes dpkg-buildpackage: info: source package cif2hkl dpkg-buildpackage: info: source version 1.4.2+ds1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean dh_auto_clean make -j8 distclean make[1]: Entering directory '/build/cif2hkl-1.4.2+ds1' rm -f *.o *.mod cif2hkl make[1]: Leaving directory '/build/cif2hkl-1.4.2+ds1' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/cif2hkl-1.4.2+ds1' dh_auto_build override_dh_auto_build make -j8 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cif2hkl-1.4.2+ds1' f77 -ffree-line-length-512 \ CFML/CFML_GlobalDeps_Linux.f90 CFML/CFML_Math_General.f90 \ CFML/CFML_String_Utilities_gf.f90 CFML/CFML_Math_3D.f90 \ CFML/CFML_Symmetry_Tables.f90 CFML/CFML_Scattering_Chemical_Tables.f90 \ CFML/CFML_Crystallographic_Symmetry.f90 CFML/CFML_Crystal_Metrics.f90 \ CFML/CFML_Reflections_Utilities.f90 CFML/CFML_Atom_TypeDef.f90 \ CFML/CFML_Geometry_Calc.f90 CFML/CFML_Molecular_Crystals.f90 \ CFML/CFML_Diffraction_Patterns.f90 CFML/CFML_Magnetic_Groups.f90 \ CFML/CFML_EisPack.f90 CFML/CFML_IO_Formats.f90 \ CFML/CFML_Structure_Factors.f90 -o cif2hkl cif2hkl.F90 -lm -g -O2 -ffile-prefix-map=/build/cif2hkl-1.4.2+ds1=. -fstack-protector-strong -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 CFML/CFML_EisPack.f90:7617:16: 7532 | do k = n, 1, -1 | 2 ...... 7617 | y = w(k-1) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) CFML/CFML_EisPack.f90:7618:18: 7532 | do k = n, 1, -1 | 2 ...... 7618 | g = rv1(k-1) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) rm *.mod make[2]: Leaving directory '/build/cif2hkl-1.4.2+ds1' help2man --output=cif2hkl.1 --version-string=$(dpkg-parsechangelog -S Version | sed -e s/-[^-]*$// -e s/[+].*//) --no-discard-stderr --no-info --name=cif2hkl ./cif2hkl make[1]: Leaving directory '/build/cif2hkl-1.4.2+ds1' dh_auto_test make -j8 test make[1]: Entering directory '/build/cif2hkl-1.4.2+ds1' ./cif2hkl --version ./cif2hkl 1.4.2 (Sept 21st 2022) by Farhi E. [emmanuel.farhi@synchrotron-soleil.fr] using crysFML Copyright (C) 2009-2019 Institut Laue Langevin, EUPL. Copyright (C) 2020- Synchrotron Soleil, GPL2. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ./cif2hkl --verbose --xtal --no-output-files examples/CaF2.cfl file='examples/CaF2.cfl'; % cell [ a b c alpha beta gamma ] cell=[ 5.46693 5.46693 5.46693 90.00000 90.00000 90.00000]; Spgr='F m -3 m'; % space group [Number 225] % [ x/a y/b z/c Biso Occ Spin Charge ] Ca1=[ 0.00000 0.00000 0.00000 3.60050 0.04167 0.00000 2.00000]; F1=[ 0.25000 0.25000 0.25000 -3.68972 0.02083 0.00000 -1.00000]; title='Ca4 F8 [F m -3 m, Cubic, Centric (-1 at origin)]'; Test OK make[1]: Leaving directory '/build/cif2hkl-1.4.2+ds1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/cif2hkl/ make -j8 install DESTDIR=/build/cif2hkl-1.4.2\+ds1/debian/cif2hkl AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/cif2hkl-1.4.2+ds1' install -D cif2hkl \ /build/cif2hkl-1.4.2+ds1/debian/cif2hkl/usr/bin/cif2hkl make[1]: Leaving directory '/build/cif2hkl-1.4.2+ds1' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'cif2hkl' in '../cif2hkl_1.4.2+ds1-1_arm64.deb'. dpkg-deb: building package 'cif2hkl-dbgsym' in '../cif2hkl-dbgsym_1.4.2+ds1-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../cif2hkl_1.4.2+ds1-1_arm64.buildinfo dpkg-genchanges --build=binary -O../cif2hkl_1.4.2+ds1-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15248 and its subdirectories I: Current time: Thu Jul 11 20:01:26 -12 2024 I: pbuilder-time-stamp: 1720771286 Sat Jun 10 01:38:28 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink16-arm64.debian.net. Sat Jun 10 01:38:28 UTC 2023 I: Preparing to do remote build '2' on codethink16-arm64.debian.net. Sat Jun 10 01:46:28 UTC 2023 I: Deleting $TMPDIR on codethink16-arm64.debian.net. Sat Jun 10 01:46:29 UTC 2023 I: cif2hkl_1.4.2+ds1-1_arm64.changes: Format: 1.8 Date: Wed, 28 Sep 2022 11:04:29 +0200 Source: cif2hkl Binary: cif2hkl cif2hkl-dbgsym Architecture: arm64 Version: 1.4.2+ds1-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Roland Mas Description: cif2hkl - Convert crystallographic descriptions into HKL F^2 reflection lis Closes: 1020400 Changes: cif2hkl (1.4.2+ds1-1) unstable; urgency=medium . * Document copyright info for example datasets and CFML library. * Exclude LuMnO3.cif dataset (unclear license). * Generate manpage with help2man. * Initial upload (Closes: #1020400). Checksums-Sha1: 226cf4ba3c9d51bb7c533265f57fd0a02a6e71ce 900620 cif2hkl-dbgsym_1.4.2+ds1-1_arm64.deb 831f5d82d1965975122e1bae9a383f2fefdc02d1 5411 cif2hkl_1.4.2+ds1-1_arm64.buildinfo a1dea45f1707ec180f674460dde8b6d875156173 707428 cif2hkl_1.4.2+ds1-1_arm64.deb Checksums-Sha256: bb4dfd00babeee70ac75996fc1b1b416ca2c2e2b018883b19d31daf90ec6d1cc 900620 cif2hkl-dbgsym_1.4.2+ds1-1_arm64.deb 5edc6086e232f6c337dbdc158eb220b97a35ebfaec7f9396176912b48064a77a 5411 cif2hkl_1.4.2+ds1-1_arm64.buildinfo 596d619109d82be10203616c56c4c2d22879695db59c893a8b9bb913e3da083f 707428 cif2hkl_1.4.2+ds1-1_arm64.deb Files: e0cbd8450801bba2fb3e391d73d8a5e5 900620 debug optional cif2hkl-dbgsym_1.4.2+ds1-1_arm64.deb 230d81ac1004e13d84099a516d9767d2 5411 science optional cif2hkl_1.4.2+ds1-1_arm64.buildinfo d578f4362cd39cda50ef44c583f58573 707428 science optional cif2hkl_1.4.2+ds1-1_arm64.deb Sat Jun 10 01:46:30 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/cif2hkl_1.4.2+ds1-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/cif2hkl_1.4.2+ds1-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/cif2hkl_1.4.2+ds1-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/b1/cif2hkl_1.4.2+ds1-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.FMijmLDI/b2/cif2hkl_1.4.2+ds1-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.381s) 0.381s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.036s) 0.036s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sat Jun 10 01:46:31 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sat Jun 10 01:46:31 UTC 2023 I: cif2hkl from bookworm built successfully and reproducibly on arm64. Sat Jun 10 01:46:32 UTC 2023 I: Submitting .buildinfo files to external archives: Sat Jun 10 01:46:32 UTC 2023 I: Submitting 8.0K b1/cif2hkl_1.4.2+ds1-1_arm64.buildinfo.asc Sat Jun 10 01:46:33 UTC 2023 I: Submitting 8.0K b2/cif2hkl_1.4.2+ds1-1_arm64.buildinfo.asc Sat Jun 10 01:46:34 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jun 10 01:46:34 UTC 2023 I: Done submitting .buildinfo files. Sat Jun 10 01:46:34 UTC 2023 I: Removing signed cif2hkl_1.4.2+ds1-1_arm64.buildinfo.asc files: removed './b1/cif2hkl_1.4.2+ds1-1_arm64.buildinfo.asc' removed './b2/cif2hkl_1.4.2+ds1-1_arm64.buildinfo.asc'