Fri Apr 14 15:41:23 UTC 2023 I: starting to build scikit-fmm/bookworm/amd64 on jenkins on '2023-04-14 15:41' Fri Apr 14 15:41:23 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/14746/console.log Fri Apr 14 15:41:23 UTC 2023 I: Downloading source for bookworm/scikit-fmm=2022.08.15-3 --2023-04-14 15:41:24-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/scikit-fmm/scikit-fmm_2022.08.15-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1970 (1.9K) [text/prs.lines.tag] Saving to: ‘scikit-fmm_2022.08.15-3.dsc’ 0K . 100% 107M=0s 2023-04-14 15:41:24 (107 MB/s) - ‘scikit-fmm_2022.08.15-3.dsc’ saved [1970/1970] Fri Apr 14 15:41:24 UTC 2023 I: scikit-fmm_2022.08.15-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: scikit-fmm Binary: python3-scikit-fmm Architecture: any Version: 2022.08.15-3 Maintainer: Bdale Garbee Homepage: https://github.com/scikit-fmm/scikit-fmm/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/debian/scikit-fmm Vcs-Git: https://salsa.debian.org/debian/scikit-fmm.git Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, python3-numpy, cython3 Package-List: python3-scikit-fmm deb python optional arch=any Checksums-Sha1: 7d8032003e634e690cf076f5143170cc9c0ab88d 409968 scikit-fmm_2022.08.15.orig.tar.gz 7b5ec98bd3b478619468f0bd80cc045136e7a240 3800 scikit-fmm_2022.08.15-3.debian.tar.xz Checksums-Sha256: eb30db2e2439a7bfbc7929a1087953e3d62f28077659fd783ca9ad025011d060 409968 scikit-fmm_2022.08.15.orig.tar.gz f7a47c638c87febd6c46b3847f49d42dc476b0f58bacd5977962f72b86fdde54 3800 scikit-fmm_2022.08.15-3.debian.tar.xz Files: 3893fb55b3b371dfa9803b4abb101c67 409968 scikit-fmm_2022.08.15.orig.tar.gz 86f537330daf51cc06487a6b1a0191b5 3800 scikit-fmm_2022.08.15-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEHguq2FwiMqGzzpLrtwRxBYMLn6EFAmPW890ACgkQtwRxBYML n6HKGA/8CszyTYBuPnvREoewKhdpIA9u3xsHVxxV/ZGxO20cy6nCVxHNSDCvRQ+x gaOfRU/u6dvokOpHi4k3UbbdEJYigGAwhDxUdh+HIgIAGcR7aaGmgdXTgMaU0Ix0 PzRRYOnr5/VRywJolEPbyg/uNu3CLnDIH/UyckXNgqH288WNNU/W2nqsMev7urOd 1Cz10MpbCLAC52xY5s0NG0f6Y+HwTdCtXOksrTW4mdCffUNXp/9I7WM/++XZDDJU CqvY9Xy3BgT57nG4sgg8cvOfK3USgsvo1Rx+J1jtbzUNRxSMQspmAbO28LRmoW7S P+i0iRs4LZqoxueyIASNJyWe5h30cwM3AP1IGyVmvMxTqAbYj2N3iR35mlzjMyLp TE2vVjO6h2n9P2DlOxHGwK74iGqosMmS3THGRHymq9m04XvY/PnOWDed4ktq0oE0 1Ce6hMbnIREm4GL3I/7rehQgI7tUFa8EbxZvshAl4kyTL+/UuGsgbJ+qp4v5G5/W UJg0V5zqIsCL4G40QO5ZKDW3Rkm/bna6dV+objZ20RYoINzbXVnwBrom5g4o2UbM 1kUL2qpbPhu7CNby/KyTV7sVF1crDhmbZV9cno37h9XLVaxnu6xm3OI8NksStnul puU7zws02LDQ8rhsBb9MW7JRHT/bhaX65Cx5ooTcQEK1hyJ4Now= =ypcD -----END PGP SIGNATURE----- Fri Apr 14 15:41:24 UTC 2023 I: Checking whether the package is not for us Fri Apr 14 15:41:24 UTC 2023 I: Starting 1st build on remote node ionos5-amd64.debian.net. Fri Apr 14 15:41:24 UTC 2023 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Fri Apr 14 15:42:18 UTC 2023 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 16 10:04:25 -12 2024 I: pbuilder-time-stamp: 1715897065 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [scikit-fmm_2022.08.15-3.dsc] I: copying [./scikit-fmm_2022.08.15.orig.tar.gz] I: copying [./scikit-fmm_2022.08.15-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Jan 29 10:31:57 2023 -12 gpgv: using RSA key 1E0BAAD85C2232A1B3CE92EBB7047105830B9FA1 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./scikit-fmm_2022.08.15-3.dsc: no acceptable signature found dpkg-source: info: extracting scikit-fmm in scikit-fmm-2022.08.15 dpkg-source: info: unpacking scikit-fmm_2022.08.15.orig.tar.gz dpkg-source: info: unpacking scikit-fmm_2022.08.15-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3956024/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='43cea1578f5f495c84504d4f86895688' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3956024' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/pbuilderrc_mCTZ --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/b1 --logfile b1/build.log scikit-fmm_2022.08.15-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Feb 12 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3956024/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, python3-numpy, cython3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 44.3 MB of archives. After unpacking 185 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get: 58 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get: 59 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get: 62 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Fetched 44.3 MB in 1s (88.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. 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Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up libpython3.11:amd64 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up libpython3.11-dev:amd64 (3.11.2-6) ... Setting up cython3 (0.29.32-2+b1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-all (3.11.2-1+b1) ... Setting up libpython3-all-dev:amd64 (3.11.2-1+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-all-dev (3.11.2-1+b1) ... Processing triggers for libc-bin (2.36-8) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/scikit-fmm-2022.08.15/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../scikit-fmm_2022.08.15-3_source.changes dpkg-buildpackage: info: source package scikit-fmm dpkg-buildpackage: info: source version 2022.08.15-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bdale Garbee dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from scikit-fmm-2022.08.15/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --with numpy3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/scikit-fmm-2022.08.15' rm -f /build/scikit-fmm-2022.08.15/skfmm/pheap.cpp dh_auto_clean I: pybuild base:240: python3.11 setup.py clean /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'configuration' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:534: UserWarning: Normalizing '2022.08.15' to '2022.8.15' warnings.warn(tmpl.format(**locals())) running clean removing '/build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it make[1]: Leaving directory '/build/scikit-fmm-2022.08.15' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --with numpy3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/scikit-fmm-2022.08.15' cython3 --cplus -3 /build/scikit-fmm-2022.08.15/skfmm/pheap.pyx dh_auto_configure I: pybuild base:240: python3.11 setup.py config /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'configuration' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:534: UserWarning: Normalizing '2022.08.15' to '2022.8.15' warnings.warn(tmpl.format(**locals())) running config make[1]: Leaving directory '/build/scikit-fmm-2022.08.15' dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build /build/scikit-fmm-2022.08.15/setup.py:116: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html from numpy.distutils.core import setup /usr/lib/python3/dist-packages/setuptools/dist.py:534: UserWarning: Normalizing '2022.08.15' to '2022.8.15' warnings.warn(tmpl.format(**locals())) running build running config_cc INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src INFO: build_src INFO: building extension "skfmm.cfmm" sources INFO: building extension "skfmm.pheap" sources INFO: build_src: building npy-pkg config files /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build_py creating /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm copying skfmm/setup.py -> /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm copying skfmm/pfmm.py -> /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm copying skfmm/heap.py -> /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm copying skfmm/__init__.py -> /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm running build_ext INFO: customize UnixCCompiler INFO: customize UnixCCompiler using build_ext INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-march=native) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating /tmp/tmppu96p681/usr creating /tmp/tmppu96p681/usr/lib creating /tmp/tmppu96p681/usr/lib/python3 creating /tmp/tmppu96p681/usr/lib/python3/dist-packages creating /tmp/tmppu96p681/usr/lib/python3/dist-packages/numpy creating /tmp/tmppu96p681/usr/lib/python3/dist-packages/numpy/distutils creating /tmp/tmppu96p681/usr/lib/python3/dist-packages/numpy/distutils/checks INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-march=native' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-O3) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-O3' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-Werror) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-Werror' INFO: CCompilerOpt.__init__[1786] : check requested baseline INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-msse) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-msse2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse2' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSE2' with flags (-msse -msse2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSE' with flags (-msse -msse2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-msse3) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse3' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSE3' with flags (-msse -msse2 -msse3) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -Werror' INFO: CCompilerOpt.__init__[1795] : check requested dispatch-able features INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mssse3) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mssse3' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-msse4.1) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse4.1' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mpopcnt) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mpopcnt' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-msse4.2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse4.2' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mf16c) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mf16c' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx2' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX2' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2 -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'F16C' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSSE3' with flags (-msse -msse2 -msse3 -mssse3) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'POPCNT' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSE41' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'SSE42' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mfma) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mfma' INFO: CCompilerOpt.feature_test[1551] : testing feature 'FMA3' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512f -mno-mmx) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512f -mno-mmx' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512F' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512cd) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512cd' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512er -mavx512pf) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512er -mavx512pf' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512_KNL' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512er -mavx512pf) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512er -mavx512pf -Werror' WARN: CCompilerOpt.dist_test[630] : CCompilerOpt._dist_test_spawn[764] : Command (x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c /usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.c -o /tmp/tmppu96p681/usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.o -MMD -MF /tmp/tmppu96p681/usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512er -mavx512pf -Werror) failed with exit status 1 output -> In file included from /usr/lib/gcc/x86_64-linux-gnu/12/include/immintrin.h:51, from /usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.c:14: In function '_mm512_exp2a23_round_pd', inlined from 'main' at /usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.c:21:17: /usr/lib/gcc/x86_64-linux-gnu/12/include/avx512erintrin.h:55:20: error: '__W' is used uninitialized [-Werror=uninitialized] 55 | return (__m512d) __builtin_ia32_exp2pd_mask ((__v8df) __A, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | (__v8df) __W, | ~~~~~~~~~~~~~ 57 | (__mmask8) -1, __R); | ~~~~~~~~~~~~~~~~~~~ /usr/lib/gcc/x86_64-linux-gnu/12/include/avx512erintrin.h: In function 'main': /usr/lib/gcc/x86_64-linux-gnu/12/include/avx512erintrin.h:54:11: note: '__W' was declared here 54 | __m512d __W; | ^~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/12/include/immintrin.h:53: In function '_mm512_mask_prefetch_i64scatter_pd', inlined from 'main' at /usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.c:23:5: /usr/lib/gcc/x86_64-linux-gnu/12/include/avx512pfintrin.h:180:3: error: 'base' may be used uninitialized [-Werror=maybe-uninitialized] 180 | __builtin_ia32_scatterpfqpd (__mask, (__v8di) __index, __addr, __scale, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 | __hint); | ~~~~~~~ : In function 'main': : note: by argument 3 of type 'const void *' to '__builtin_ia32_scatterpfqpd' declared here /usr/lib/python3/dist-packages/numpy/distutils/checks/cpu_avx512_knl.c:18:9: note: 'base' declared here 18 | int base[128]; | ^~~~ cc1: all warnings being treated as errors WARN: CCompilerOpt.feature_test[1567] : testing failed INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512vl -mavx512bw -mavx512dq) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512vl -mavx512bw -mavx512dq' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512_SKX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -Werror' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512CD' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512vnni) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512vnni' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512_CLX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512vnni) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512vnni -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512ifma -mavx512vbmi) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512ifma -mavx512vbmi' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512_CNL' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512ifma -mavx512vbmi) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512ifma -mavx512vbmi -Werror' INFO: CCompilerOpt.cc_test_flags[1077] : testing flags (-mavx512vbmi2 -mavx512bitalg -mavx512vpopcntdq) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-mavx512vbmi2 -mavx512bitalg -mavx512vpopcntdq' INFO: CCompilerOpt.feature_test[1551] : testing feature 'AVX512_ICL' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512vnni -mavx512ifma -mavx512vbmi -mavx512vbmi2 -mavx512bitalg -mavx512vpopcntdq) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -mavx512vnni -mavx512ifma -mavx512vbmi -mavx512vbmi2 -mavx512bitalg -mavx512vpopcntdq -Werror' INFO: CCompilerOpt.__init__[1807] : skip features (SSE SSE2 SSE3) since its part of baseline INFO: CCompilerOpt.__init__[1811] : initialize targets groups INFO: CCompilerOpt.__init__[1813] : parse target group simd_test INFO: CCompilerOpt._parse_target_tokens[2024] : skip targets (NEON VSX2 VSX XOP VSX3 VXE2 VSX4 VXE ASIMD FMA4 VX) not part of baseline or dispatch-able features INFO: CCompilerOpt._parse_policy_not_keepbase[2136] : skip baseline features (SSE2) INFO: CCompilerOpt.generate_dispatch_header[2357] : generate CPU dispatch header: (build/src.linux-x86_64-3.11/numpy/distutils/include/npy_cpu_dispatch_config.h) WARN: CCompilerOpt.generate_dispatch_header[2366] : dispatch header dir build/src.linux-x86_64-3.11/numpy/distutils/include does not exist, creating it INFO: CCompilerOpt.feature_extra_checks[1631] : Testing extra checks for feature 'AVX512F' (AVX512F_REDUCE) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -Werror' INFO: CCompilerOpt.feature_extra_checks[1631] : Testing extra checks for feature 'AVX512_SKX' (AVX512BW_MASK AVX512DQ_MASK) INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -Werror' INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mno-mmx -mavx512cd -mavx512vl -mavx512bw -mavx512dq -Werror' INFO: customize UnixCCompiler INFO: customize UnixCCompiler using build_ext INFO: building 'skfmm.cfmm' extension INFO: compiling C++ sources INFO: C compiler: x86_64-linux-gnu-g++ -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-x86_64-cpython-311/skfmm INFO: compile options: '-Iskfmm -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/src.linux-x86_64-3.11/numpy/distutils/include -I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3' INFO: x86_64-linux-gnu-g++: skfmm/fmm.cpp INFO: x86_64-linux-gnu-g++: skfmm/heap.cpp INFO: x86_64-linux-gnu-g++: skfmm/base_marcher.cpp INFO: x86_64-linux-gnu-g++: skfmm/distance_marcher.cpp INFO: x86_64-linux-gnu-g++: skfmm/travel_time_marcher.cpp INFO: x86_64-linux-gnu-g++: skfmm/extension_velocity_marcher.cpp In file included from /usr/include/python3.11/numpy/ndarraytypes.h:1940, from /usr/include/python3.11/numpy/ndarrayobject.h:12, from /usr/include/python3.11/numpy/noprefix.h:9, from skfmm/fmm.cpp:5: /usr/include/python3.11/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ skfmm/travel_time_marcher.cpp: In member function 'virtual double travelTimeMarcher::updatePointOrderTwo(int, std::set)': skfmm/travel_time_marcher.cpp:87:25: warning: comparison of integer expressions of different signedness: 'std::set::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 87 | if(avoid_dim.size() == dim_) return std::numeric_limits::infinity(); //end of the recursion, use inf so that it is discarded selecting the minimum | ~~~~~~~~~~~~~~~~~^~~~~~~ In file included from skfmm/base_marcher.cpp:6: In member function 'int baseMarcher::_getN(int, int, int, int)', inlined from 'void baseMarcher::solve()' at skfmm/base_marcher.cpp:201:33: skfmm/base_marcher.h:77:25: warning: 'coord' may be used uninitialized [-Wmaybe-uninitialized] 77 | int newc = coord[dim]+dir; | ~~~~~~~~~^ skfmm/base_marcher.h: In member function 'void baseMarcher::solve()': skfmm/base_marcher.h:75:9: note: 'coord' declared here 75 | int coord[MaximumDimension]; | ^~~~~ INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -ldl -lm -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/skfmm/fmm.o build/temp.linux-x86_64-cpython-311/skfmm/heap.o build/temp.linux-x86_64-cpython-311/skfmm/base_marcher.o build/temp.linux-x86_64-cpython-311/skfmm/distance_marcher.o build/temp.linux-x86_64-cpython-311/skfmm/travel_time_marcher.o build/temp.linux-x86_64-cpython-311/skfmm/extension_velocity_marcher.o -L/usr/lib/x86_64-linux-gnu -o /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/cfmm.cpython-311-x86_64-linux-gnu.so INFO: building 'skfmm.pheap' extension INFO: compiling C++ sources INFO: C compiler: x86_64-linux-gnu-g++ -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/src.linux-x86_64-3.11/numpy/distutils/include -I/usr/include/python3.11 -c' extra options: '-msse -msse2 -msse3' INFO: x86_64-linux-gnu-g++: skfmm/pheap.cpp INFO: x86_64-linux-gnu-g++: skfmm/heap.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -ldl -lm -I/usr/include/python3.11 -I/usr/include/python3.11 -Wsign-compare -g -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -g -fwrapv -O2 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/skfmm/pheap.o build/temp.linux-x86_64-cpython-311/skfmm/heap.o -L/usr/lib/x86_64-linux-gnu -o /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/pheap.cpython-311-x86_64-linux-gnu.so INFO: ########### EXT COMPILER OPTIMIZATION ########### INFO: Platform : Architecture: x64 Compiler : gcc CPU baseline : Requested : 'min' Enabled : SSE SSE2 SSE3 Flags : -msse -msse2 -msse3 Extra checks: none CPU dispatch : Requested : 'max -xop -fma4' Enabled : SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 AVX512F AVX512CD AVX512_SKX AVX512_CLX AVX512_CNL AVX512_ICL Generated : none INFO: CCompilerOpt.cache_flush[857] : write cache to path -> /build/scikit-fmm-2022.08.15/build/temp.linux-x86_64-cpython-311/ccompiler_opt_cache_ext.py dh_auto_test -O--buildsystem=pybuild I: pybuild base:240: cd /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build; python3.11 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-scikit-fmm/ -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm /build/scikit-fmm-2022.08.15/setup.py:116: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html from numpy.distutils.core import setup /usr/lib/python3/dist-packages/setuptools/dist.py:534: UserWarning: Normalizing '2022.08.15' to '2022.8.15' warnings.warn(tmpl.format(**locals())) Note: if you need to uninstall you should `pip install scikit-fmm` instead of using `setup.py install` running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running config_cc INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src INFO: build_src INFO: building extension "skfmm.cfmm" sources INFO: building extension "skfmm.pheap" sources INFO: build_src: building npy-pkg config files running build_py running build_ext INFO: customize UnixCCompiler INFO: customize UnixCCompiler using build_ext INFO: CCompilerOpt.__init__[813] : load cache from file -> /build/scikit-fmm-2022.08.15/build/temp.linux-x86_64-cpython-311/ccompiler_opt_cache_ext.py INFO: CCompilerOpt.__init__[824] : hit the file cache INFO: customize UnixCCompiler INFO: customize UnixCCompiler using build_ext running install_lib creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11 creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm creating /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/__pycache__ copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/__pycache__/heap.cpython-311.pyc -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/__pycache__ copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/__pycache__/pfmm.cpython-311.pyc -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/__pycache__ copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/__pycache__/__init__.cpython-311.pyc -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/__pycache__ copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/pheap.cpython-311-x86_64-linux-gnu.so -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/cfmm.cpython-311-x86_64-linux-gnu.so -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/__init__.py -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/heap.py -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/pfmm.py -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm copying /build/scikit-fmm-2022.08.15/.pybuild/cpython3_3.11_scikit-fmm/build/skfmm/setup.py -> /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm byte-compiling /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/heap.py to heap.cpython-311.pyc byte-compiling /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/pfmm.py to pfmm.cpython-311.pyc byte-compiling /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/skfmm/setup.py to setup.cpython-311.pyc running install_egg_info running egg_info creating scikit_fmm.egg-info writing scikit_fmm.egg-info/PKG-INFO writing dependency_links to scikit_fmm.egg-info/dependency_links.txt writing requirements to scikit_fmm.egg-info/requires.txt writing top-level names to scikit_fmm.egg-info/top_level.txt writing manifest file 'scikit_fmm.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/egg_info.py:655: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. Please extend command classes from setuptools instead of distutils. warnings.warn( reading manifest file 'scikit_fmm.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.txt' adding license file 'LICENSE.txt' writing manifest file 'scikit_fmm.egg-info/SOURCES.txt' Copying scikit_fmm.egg-info to /build/scikit-fmm-2022.08.15/debian/python3-scikit-fmm/usr/lib/python3.11/dist-packages/scikit_fmm-2022.8.15.egg-info Skipping SOURCES.txt running install_scripts running install_clib INFO: customize UnixCCompiler INFO: ########### EXT COMPILER OPTIMIZATION ########### INFO: Platform : Architecture: x64 Compiler : gcc CPU baseline : Requested : 'min' Enabled : SSE SSE2 SSE3 Flags : -msse -msse2 -msse3 Extra checks: none CPU dispatch : Requested : 'max -xop -fma4' Enabled : SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 AVX512F AVX512CD AVX512_SKX AVX512_CLX AVX512_CNL AVX512_ICL Generated : none INFO: CCompilerOpt.cache_flush[857] : write cache to path -> /build/scikit-fmm-2022.08.15/build/temp.linux-x86_64-cpython-311/ccompiler_opt_cache_ext.py dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_numpy3 -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-scikit-fmm' in '../python3-scikit-fmm_2022.08.15-3_amd64.deb'. dpkg-deb: building package 'python3-scikit-fmm-dbgsym' in '../python3-scikit-fmm-dbgsym_2022.08.15-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../scikit-fmm_2022.08.15-3_amd64.buildinfo dpkg-genchanges --build=binary -O../scikit-fmm_2022.08.15-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from scikit-fmm-2022.08.15/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3956024 and its subdirectories I: Current time: Thu May 16 10:05:18 -12 2024 I: pbuilder-time-stamp: 1715897118 Fri Apr 14 15:42:18 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Fri Apr 14 15:42:18 UTC 2023 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Fri Apr 14 15:46:49 UTC 2023 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Fri Apr 14 15:46:49 UTC 2023 I: scikit-fmm_2022.08.15-3_amd64.changes: Format: 1.8 Date: Sun, 29 Jan 2023 15:30:03 -0700 Source: scikit-fmm Binary: python3-scikit-fmm python3-scikit-fmm-dbgsym Architecture: amd64 Version: 2022.08.15-3 Distribution: unstable Urgency: medium Maintainer: Bdale Garbee Changed-By: Bdale Garbee Description: python3-scikit-fmm - fast marching method extension (Python 3) Changes: scikit-fmm (2022.08.15-3) unstable; urgency=medium . [Debian Janitor] * Trim trailing whitespace. * debian/copyright: use spaces rather than tabs to start continuation lines. * Set upstream metadata fields: Repository-Browse. * Update standards version to 4.6.1, no changes needed. Checksums-Sha1: adc7c9a99bdd96636d507f464093bd6c267761c3 145800 python3-scikit-fmm-dbgsym_2022.08.15-3_amd64.deb f648d2c2d710f9a3017faa2f3861e78bd9a06d77 45840 python3-scikit-fmm_2022.08.15-3_amd64.deb bf2e159d25f453d85279545d078cb6bae9c7fe0f 6389 scikit-fmm_2022.08.15-3_amd64.buildinfo Checksums-Sha256: dbfefdf07a2b8208456d280bd4e8bdff31cfed1e067429388ea80861c737bd52 145800 python3-scikit-fmm-dbgsym_2022.08.15-3_amd64.deb 128f843830c9bf113f8ee87efa6375f8c43c9704e325590f896ae521bdb70028 45840 python3-scikit-fmm_2022.08.15-3_amd64.deb fce1a7e4512d1a73ed82a473529b97cdc768411cc934de5b960a3f413e1307eb 6389 scikit-fmm_2022.08.15-3_amd64.buildinfo Files: c60514501e3c8a9b505db7bc00019635 145800 debug optional python3-scikit-fmm-dbgsym_2022.08.15-3_amd64.deb 04d8b0928f85c422bd5a09ef5f6b595e 45840 python optional python3-scikit-fmm_2022.08.15-3_amd64.deb 2bfd436da6be65a4561b735a5c165e61 6389 python optional scikit-fmm_2022.08.15-3_amd64.buildinfo Fri Apr 14 15:46:51 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/scikit-fmm_2022.08.15-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/scikit-fmm_2022.08.15-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/scikit-fmm_2022.08.15-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/b1/scikit-fmm_2022.08.15-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.7YlhyVGO/b2/scikit-fmm_2022.08.15-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.724s) 0.724s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.035s) 0.034s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.001s) 0.001s 1 call specialize Fri Apr 14 15:47:04 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Fri Apr 14 15:47:04 UTC 2023 I: scikit-fmm from bookworm built successfully and reproducibly on amd64. Fri Apr 14 15:47:07 UTC 2023 I: Submitting .buildinfo files to external archives: Fri Apr 14 15:47:07 UTC 2023 I: Submitting 8.0K b1/scikit-fmm_2022.08.15-3_amd64.buildinfo.asc Fri Apr 14 15:47:09 UTC 2023 I: Submitting 8.0K b2/scikit-fmm_2022.08.15-3_amd64.buildinfo.asc Fri Apr 14 15:47:10 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Apr 14 15:47:10 UTC 2023 I: Done submitting .buildinfo files. Fri Apr 14 15:47:10 UTC 2023 I: Removing signed scikit-fmm_2022.08.15-3_amd64.buildinfo.asc files: removed './b1/scikit-fmm_2022.08.15-3_amd64.buildinfo.asc' removed './b2/scikit-fmm_2022.08.15-3_amd64.buildinfo.asc'