Wed Jun 7 11:47:43 UTC 2023 I: starting to build q2-quality-control/bookworm/amd64 on jenkins on '2023-06-07 11:47' Wed Jun 7 11:47:43 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_24/500/console.log Wed Jun 7 11:47:43 UTC 2023 I: Downloading source for bookworm/q2-quality-control=2022.11.1-2 --2023-06-07 11:47:43-- http://cdn-fastly.deb.debian.org/debian/pool/main/q/q2-quality-control/q2-quality-control_2022.11.1-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2680 (2.6K) [text/prs.lines.tag] Saving to: ‘q2-quality-control_2022.11.1-2.dsc’ 0K .. 100% 425M=0s 2023-06-07 11:47:43 (425 MB/s) - ‘q2-quality-control_2022.11.1-2.dsc’ saved [2680/2680] Wed Jun 7 11:47:43 UTC 2023 I: q2-quality-control_2022.11.1-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: q2-quality-control Binary: q2-quality-control Architecture: all Version: 2022.11.1-2 Maintainer: Debian Med Packaging Team Uploaders: Liubov Chuprikova , Steffen Moeller , Étienne Mollier Homepage: https://qiime2.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/q2-quality-control Vcs-Git: https://salsa.debian.org/med-team/q2-quality-control.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest-cov Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pytest-cov , python3-biom-format , python3-h5py , python3-numpy , python3-pandas , python3-scipy , python3-seaborn , qiime (>= 2022.11.1) , q2templates (>= 2022.11.1) , q2-taxa (>= 2022.11.1) , q2-feature-table (>= 2022.11.1) , bowtie2 , ncbi-blast+ , samtools , vsearch Package-List: q2-quality-control deb science optional arch=all Checksums-Sha1: 42dbe24b485726b9f0d2402d0db5ed49434848c4 495291 q2-quality-control_2022.11.1.orig.tar.gz dcebf4db22a64968aad3b9f6298913b51acb75fa 5512 q2-quality-control_2022.11.1-2.debian.tar.xz Checksums-Sha256: e7ef298efe0d22a0728feaf255e84e033d835e20c4b207a509474fd59b01d1d1 495291 q2-quality-control_2022.11.1.orig.tar.gz 53c1b47d0e1076b72111caba7d815335d63b14895de98416ab5aeffeccf5ab38 5512 q2-quality-control_2022.11.1-2.debian.tar.xz Files: 9187a4272a60566f8ea67b3a8fe26dcc 495291 q2-quality-control_2022.11.1.orig.tar.gz 86daa6fb8aaaed8fa9d3409e09c12527 5512 q2-quality-control_2022.11.1-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmPQHwERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHXAg/7BVWbiwQiwy0Mgelq2jIzXpddosIJ68ob JbZvUIca9LGWOuNEZjJwKsr2mwcazf3BCzJPSssbTehIKgRUUFU2jXEGBaW4l+m5 qkXMNENYFy3cpn2AVfA6L2ZP2/N1UotV3Epc5/gyCaGUacCwu/7LqctZf+e1QgzD YHIcmYTc4rGdQgvFp5+dx64An+3QMXqoH3/cP65BPDr9TjFTOgqO316+8bC0nZmq Vgg5NY9I81NNMCYF4kVTwnZ6hHxPEx7/ijYiJWfgSyiOXu5Ahx3pmN/PKgsNKChM l+r9lnYHC71P4H61I0prtR+KW+wcfeuZ52dQ7ZEvB1313YAr3iVyF4JTb/+sQWBO d7PdNc36jw0QZYYsUxq1r0wzRrlYOpLYPb5tb5phnv+RNXWz1DRib/dkK6sCUbKC cyz0Ngohe3WoT4cGqiKGrWi7EAPkZrt52l7blK3D71ioV2vS+bv8zGY04mE+6WsU a2RVEduMY/dLh4ceErk24BDSJ+IEoZaqtkrAWN2680fGJ77OtGaQXFEbOW1lPydL Ry6KqooCDV8wwiRQera8AgxtOsiNBQUxIiRNCap++gB2ZGRAdWZnaY4KhGwpBxgP uv07Xs0AxyFpl42c6InD9jvsLjMnfiISgIcwWY+v4QiPBqypA7a8Gvp2J78E1dlS ShDe5Lhj3sI= =HQQB -----END PGP SIGNATURE----- Wed Jun 7 11:47:43 UTC 2023 I: Checking whether the package is not for us Wed Jun 7 11:47:43 UTC 2023 I: Starting 1st build on remote node ionos15-amd64.debian.net. Wed Jun 7 11:47:43 UTC 2023 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Wed Jun 7 11:54:30 UTC 2023 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jul 9 06:11:04 -12 2024 I: pbuilder-time-stamp: 1720548664 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [q2-quality-control_2022.11.1-2.dsc] I: copying [./q2-quality-control_2022.11.1.orig.tar.gz] I: copying [./q2-quality-control_2022.11.1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 24 06:10:09 2023 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./q2-quality-control_2022.11.1-2.dsc: no acceptable signature found dpkg-source: info: extracting q2-quality-control in q2-quality-control-2022.11.1 dpkg-source: info: unpacking q2-quality-control_2022.11.1.orig.tar.gz dpkg-source: info: unpacking q2-quality-control_2022.11.1-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3600390/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='aa27158c2a31444b89fd7745b1acacde' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3600390' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/pbuilderrc_gTIC --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/b1 --logfile b1/build.log q2-quality-control_2022.11.1-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos15-amd64 6.1.0-0.deb11.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.20-2~bpo11+1 (2023-04-23) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3600390/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-h5py, python3-numpy, python3-pandas, python3-scipy, python3-seaborn, qiime (>= 2022.11.1), q2templates (>= 2022.11.1), q2-taxa (>= 2022.11.1), q2-feature-table (>= 2022.11.1), bowtie2, ncbi-blast+, samtools, vsearch dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19591 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on qiime (>= 2022.11.1); however: Package qiime is not installed. pbuilder-satisfydepends-dummy depends on q2templates (>= 2022.11.1); however: Package q2templates is not installed. pbuilder-satisfydepends-dummy depends on q2-taxa (>= 2022.11.1); however: Package q2-taxa is not installed. pbuilder-satisfydepends-dummy depends on q2-feature-table (>= 2022.11.1); however: Package q2-feature-table is not installed. pbuilder-satisfydepends-dummy depends on bowtie2; however: Package bowtie2 is not installed. pbuilder-satisfydepends-dummy depends on ncbi-blast+; however: Package ncbi-blast+ is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. pbuilder-satisfydepends-dummy depends on vsearch; however: Package vsearch is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bowtie2{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lyx{a} fonts-mathjax{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} jupyter-nbextension-jupyter-js-widgets{a} libaec0{a} libarchive-zip-perl{a} libargon2-1{a} libbabeltrace1{a} libblas3{a} libboost-dev{a} libboost-regex1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcurl3-gnutls{a} libcurl4{a} libdebhelper-perl{a} libdebuginfod-common{a} libdebuginfod1{a} libdeflate0{a} libdw1{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-hl-100{a} libhts3{a} libhtscodecs2{a} libicu72{a} libimagequant0{a} libipt2{a} libjbig0{a} libjpeg62-turbo{a} libjs-backbone{a} libjs-bootstrap{a} libjs-bootstrap-tour{a} libjs-codemirror{a} libjs-es6-promise{a} libjs-jed{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-typeahead{a} libjs-jquery-ui{a} libjs-marked{a} libjs-mathjax{a} libjs-moment{a} libjs-requirejs{a} libjs-requirejs-text{a} libjs-sphinxdoc{a} libjs-text-encoding{a} libjs-underscore{a} libjs-xterm{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblmdb0{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libmbedcrypto7{a} libmbedtls14{a} libmbedx509-1{a} libncurses6{a} libnghttp2-14{a} libnorm1{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libopenjp2-7{a} libpcre3{a} libpgm-5.3-0{a} libpipeline1{a} libpng16-16{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4v5{a} libssh2-1{a} libssw0{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxsimd-dev{a} libxslt1.1{a} libxss1{a} libyajl2{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} ncbi-blast+{a} ncbi-data{a} node-d3-color{a} node-d3-interpolate{a} node-d3-scale-chromatic{a} node-jed{a} node-natural-sort{a} node-normalize.css{a} node-thenby{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python-tinycss2-common{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-argon2{a} python3-asttokens{a} python3-attr{a} python3-backcall{a} python3-beniget{a} python3-bibtexparser{a} python3-biom-format{a} python3-bleach{a} python3-brotli{a} python3-bs4{a} python3-bytecode{a} python3-cachecontrol{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-dill{a} python3-distutils{a} python3-entrypoints{a} python3-executing{a} python3-fastjsonschema{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-future{a} python3-gast{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-html5lib{a} python3-idna{a} python3-ijson{a} python3-iniconfig{a} python3-ipykernel{a} python3-ipython{a} python3-ipython-genutils{a} python3-ipywidgets{a} python3-jedi{a} python3-jinja2{a} python3-jsonschema{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-jupyterlab-pygments{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lockfile{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-nbclient{a} python3-nbconvert{a} python3-nbformat{a} python3-nest-asyncio{a} python3-networkx{a} python3-notebook{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pandocfilters{a} python3-parso{a} python3-pexpect{a} python3-pickleshare{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-ply{a} python3-prometheus-client{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-public{a} python3-pure-eval{a} python3-py{a} python3-pydevd{a} python3-pygments{a} python3-pyparsing{a} python3-pyrsistent{a} python3-pytest{a} python3-pytest-cov{a} python3-pythran{a} python3-pytz-deprecation-shim{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-send2trash{a} python3-setuptools{a} python3-six{a} python3-skbio{a} python3-soupsieve{a} python3-stack-data{a} python3-sympy{a} python3-terminado{a} python3-tinycss2{a} python3-tk{a} python3-tornado{a} python3-traitlets{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-webencodings{a} python3-widgetsnbextension{a} python3-yaml{a} python3-zmq{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} q2-feature-table{a} q2-taxa{a} q2-types{a} q2templates{a} qiime{a} readline-common{a} samtools{a} sensible-utils{a} tk8.6-blt2.5{a} ucf{a} unicode-data{a} vsearch{a} x11-common{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common jupyter-notebook libarchive-cpio-perl libc6-dbg libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pandoc publicsuffix python3-babel python3-bottleneck python3-gdal python3-gi python3-json-pointer python3-numba python3-numexpr python3-odf python3-olefile python3-openpyxl python3-patsy python3-pydot python3-pygraphviz python3-rfc3987 python3-tables python3-uritemplate python3-webcolors q2-cutadapt q2-demux q2-feature-classifier q2-metadata q2-quality-filter q2cli shared-mime-info wget xdg-user-dirs 0 packages upgraded, 316 newly installed, 0 to remove and 0 not upgraded. Need to get 181 MB of archives. After unpacking 959 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 libdebuginfod-common all 0.188-2.1 [21.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 16 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.9-1 [1416 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 bowtie2 amd64 2.5.0-3+b2 [1409 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-3 [76.3 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-3 [131 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.7-1 [186 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libdw1 amd64 0.188-2.1 [235 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libbabeltrace1 amd64 1.5.11-1+b2 [172 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-10 [381 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 libdebuginfod1 amd64 0.188-2.1 [27.3 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libipt2 amd64 2.0.5-1 [43.9 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libsource-highlight-common all 3.1.9-4.2 [77.4 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libboost-regex1.74.0 amd64 1.74.0+ds1-21 [487 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libsource-highlight4v5 amd64 3.1.9-4.2+b3 [257 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 gdb amd64 13.1-3 [3962 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 jupyter-nbextension-jupyter-js-widgets all 6.0.0-11 [477 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libargon2-1 amd64 0~20171227-0.3+deb12u1 [19.4 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-21 [9508 kB] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get: 102 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-10 [386 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs2 amd64 1.3.0-4 [87.5 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 libhts3 amd64 1.16+ds-3 [430 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 libjs-backbone all 1.4.1~dfsg+~1.4.15-3 [186 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap-tour all 0.12.0+dfsg-5 [20.9 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libjs-codemirror all 5.65.0+~cs5.83.9-2 [774 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libjs-es6-promise all 4.2.8-12 [15.9 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 node-jed all 1.1.1-4 [14.7 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libjs-jed all 1.1.1-4 [3772 B] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-metadata all 12-4 [6532 B] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-typeahead all 2.11.0+dfsg1-3 [47.7 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libjs-marked all 4.2.3+ds+~4.0.7-2 [34.5 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 libjs-moment all 2.29.4+ds-1 [155 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libjs-requirejs all 2.3.6+ds+~2.1.34-2 [196 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libjs-requirejs-text all 2.0.12-1.1 [9016 B] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libjs-text-encoding all 0.7.0-5 [104 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 libjs-xterm all 3.8.1+~cs0.9.0-1 [8728 B] Get: 139 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 liblmdb0 amd64 0.9.24-1 [45.0 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 liblzf1 amd64 3.6-3 [10.2 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libmbedcrypto7 amd64 2.28.3-1 [277 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libmbedx509-1 amd64 2.28.3-1 [128 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libmbedtls14 amd64 2.28.3-1 [163 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libncurses6 amd64 6.4-4 [103 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libnorm1 amd64 1.5.9+dfsg-2 [221 kB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-2 [189 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libpgm-5.3-0 amd64 5.3.128~dfsg-2 [161 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get: 160 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4.1 [10.6 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libsodium23 amd64 1.0.18-1 [161 kB] Get: 164 http://deb.debian.org/debian bookworm/main amd64 libssw0 amd64 1.1-13 [19.7 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2 [285 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6 [316 kB] Get: 167 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.4-0.2 [99.3 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.2 [109 kB] Get: 169 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get: 170 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 libyajl2 amd64 2.1.0-3 [23.8 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get: 173 http://deb.debian.org/debian bookworm/main amd64 libzmq5 amd64 4.3.4-6 [273 kB] Get: 174 http://deb.debian.org/debian bookworm/main amd64 ncbi-data all 6.1.20170106+dfsg1-10 [3557 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 ncbi-blast+ amd64 2.12.0+ds-3+b1 [11.9 MB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 node-d3-color all 1.2.8-5 [15.0 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 node-d3-interpolate all 1.4.0-4 [18.5 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 node-d3-scale-chromatic all 1.5.0-7 [18.8 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 node-natural-sort all 1.0.0-5 [4296 B] Get: 180 http://deb.debian.org/debian bookworm/main amd64 node-normalize.css all 8.0.1-5 [12.7 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 node-thenby all 1.3.4+git20200720.0fd165a+ds-3 [4836 B] Get: 182 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 183 http://deb.debian.org/debian bookworm/main amd64 python-tinycss2-common all 1.2.1-2 [31.5 kB] Get: 184 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get: 185 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB] Get: 186 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get: 187 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get: 188 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-3 [13.0 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 python3-cffi-backend amd64 1.15.1-5+b1 [84.6 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 python3-argon2 amd64 21.1.0-2 [22.8 kB] Get: 191 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 python3-asttokens all 2.2.1-1 [19.8 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get: 194 http://deb.debian.org/debian bookworm/main amd64 python3-backcall all 0.2.0-4 [12.1 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get: 196 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get: 197 http://deb.debian.org/debian bookworm/main amd64 python3-future all 0.18.2-6 [348 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.9-1 [138 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 python3-bibtexparser all 1.1.0+ds-5 [31.8 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-8 [804 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-8 [10.3 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 python3-colorama all 0.4.6-2 [36.8 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 python3-click all 8.1.3-2 [92.2 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-4 [30.1 kB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.5.3+dfsg-2 [3499 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 python3-biom-format amd64 2.1.12-3+b1 [128 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 python3-html5lib all 1.1-3 [93.0 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 python3-bleach all 5.0.1-2 [48.5 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b6 [281 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 python3-soupsieve all 2.3.2-1 [38.8 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 python3-bs4 all 4.11.2-2 [121 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 python3-bytecode all 0.14.0-2 [39.9 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 python3-certifi all 2022.9.24-1 [153 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 python3-charset-normalizer all 3.0.1-2 [49.3 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 python3-idna all 3.3-1 [39.4 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 python3-urllib3 all 1.26.12-1 [117 kB] Get: 226 http://deb.debian.org/debian bookworm/main amd64 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get: 227 http://deb.debian.org/debian bookworm/main amd64 python3-requests all 2.28.1+dfsg-1 [67.9 kB] Get: 228 http://deb.debian.org/debian bookworm/main amd64 python3-msgpack amd64 1.0.3-2+b1 [67.3 kB] Get: 229 http://deb.debian.org/debian bookworm/main amd64 python3-cachecontrol all 0.12.12-2 [17.9 kB] Get: 230 http://deb.debian.org/debian bookworm/main amd64 python3-contourpy amd64 1.0.7-1+b1 [176 kB] Get: 231 http://deb.debian.org/debian bookworm/main amd64 python3-coverage amd64 6.5.0+dfsg1-2+b1 [153 kB] Get: 232 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get: 233 http://deb.debian.org/debian bookworm/main amd64 python3-pydevd amd64 2.9.5+ds-4 [476 kB] Get: 234 http://deb.debian.org/debian bookworm/main amd64 python3-debugpy all 1.6.6+ds-1 [67.7 kB] Get: 235 http://deb.debian.org/debian bookworm/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 236 http://deb.debian.org/debian bookworm/main amd64 python3-dill all 0.3.6-1 [79.5 kB] Get: 237 http://deb.debian.org/debian bookworm/main amd64 python3-entrypoints all 0.4-2 [7184 B] Get: 238 http://deb.debian.org/debian bookworm/main amd64 python3-executing all 1.2.0-2 [22.6 kB] Get: 239 http://deb.debian.org/debian bookworm/main amd64 python3-fastjsonschema all 2.16.3-2 [21.6 kB] Get: 240 http://deb.debian.org/debian bookworm/main amd64 python3-psutil amd64 5.9.4-1+b1 [189 kB] Get: 241 http://deb.debian.org/debian bookworm/main amd64 python3-public all 2.3-4 [24.7 kB] Get: 242 http://deb.debian.org/debian bookworm/main amd64 python3-flufl.lock all 5.0.1-4 [16.2 kB] Get: 243 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get: 244 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get: 245 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.11.1-1 [4358 kB] Get: 246 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-2 [95.2 kB] Get: 247 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.2-1+b1 [1194 kB] Get: 248 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b2 [25.0 kB] Get: 249 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 15.0.0-1 [7984 kB] Get: 250 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.38.0-1+b1 [1012 kB] Get: 251 http://deb.debian.org/debian bookworm/main amd64 python3-hdmedians amd64 0.14.2-5+b1 [100 kB] Get: 252 http://deb.debian.org/debian bookworm/main amd64 python3-ijson amd64 3.2.0-1 [37.5 kB] Get: 253 http://deb.debian.org/debian bookworm/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 254 http://deb.debian.org/debian bookworm/main amd64 python3-parso all 0.8.3-1 [67.4 kB] Get: 255 http://deb.debian.org/debian bookworm/main amd64 python3-jedi all 0.18.2-1 [689 kB] Get: 256 http://deb.debian.org/debian bookworm/main amd64 python3-traitlets all 5.5.0-1 [92.4 kB] Get: 257 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 258 http://deb.debian.org/debian bookworm/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get: 259 http://deb.debian.org/debian bookworm/main amd64 python3-pexpect all 4.8.0-4 [52.9 kB] Get: 260 http://deb.debian.org/debian bookworm/main amd64 python3-pickleshare all 0.7.5-5 [7600 B] Get: 261 http://deb.debian.org/debian bookworm/main amd64 python3-wcwidth all 0.2.5+dfsg1-1.1 [21.4 kB] Get: 262 http://deb.debian.org/debian bookworm/main amd64 python3-prompt-toolkit all 3.0.36-2 [276 kB] Get: 263 http://deb.debian.org/debian bookworm/main amd64 python3-pygments all 2.14.0+dfsg-1 [783 kB] Get: 264 http://deb.debian.org/debian bookworm/main amd64 python3-pure-eval all 0.2.2-1 [11.2 kB] Get: 265 http://deb.debian.org/debian bookworm/main amd64 python3-stack-data all 0.6.2-3 [21.8 kB] Get: 266 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Get: 267 http://deb.debian.org/debian bookworm/main amd64 python3-ipython all 8.5.0-4 [517 kB] Get: 268 http://deb.debian.org/debian bookworm/main amd64 python3-jupyter-core all 4.12.0-1 [27.3 kB] Get: 269 http://deb.debian.org/debian bookworm/main amd64 python3-nest-asyncio all 1.5.4-1 [6248 B] Get: 270 http://deb.debian.org/debian bookworm/main amd64 python3-tornado amd64 6.2.0-3 [337 kB] Get: 271 http://deb.debian.org/debian bookworm/main amd64 python3-py all 1.11.0-1 [89.2 kB] Get: 272 http://deb.debian.org/debian bookworm/main amd64 python3-zmq amd64 24.0.1-4+b1 [263 kB] Get: 273 http://deb.debian.org/debian bookworm/main amd64 python3-jupyter-client all 7.4.9-2 [103 kB] Get: 274 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get: 275 http://deb.debian.org/debian bookworm/main amd64 python3-ipykernel all 6.17.0-1 [109 kB] Get: 276 http://deb.debian.org/debian bookworm/main amd64 python3-ipython-genutils all 0.2.0-5 [21.4 kB] Get: 277 http://deb.debian.org/debian bookworm/main amd64 python3-pyrsistent amd64 0.18.1-1+b3 [60.0 kB] Get: 278 http://deb.debian.org/debian bookworm/main amd64 python3-jsonschema all 4.10.3-1 [67.9 kB] Get: 279 http://deb.debian.org/debian bookworm/main amd64 python3-nbformat all 5.5.0-1 [43.2 kB] Get: 280 http://deb.debian.org/debian bookworm/main amd64 python3-terminado all 0.17.0-1 [19.2 kB] Get: 281 http://deb.debian.org/debian bookworm/main amd64 python3-markupsafe amd64 2.1.2-1+b1 [13.2 kB] Get: 282 http://deb.debian.org/debian bookworm/main amd64 python3-jinja2 all 3.1.2-1 [119 kB] Get: 283 http://deb.debian.org/debian bookworm/main amd64 python3-jupyterlab-pygments all 0.2.2-3 [6096 B] Get: 284 http://deb.debian.org/debian bookworm/main amd64 python3-nbclient all 0.7.2-1 [62.1 kB] Get: 285 http://deb.debian.org/debian bookworm/main amd64 python3-pandocfilters all 1.5.0-1 [23.7 kB] Get: 286 http://deb.debian.org/debian bookworm/main amd64 python3-tinycss2 all 1.2.1-2 [21.9 kB] Get: 287 http://deb.debian.org/debian bookworm/main amd64 python3-nbconvert all 6.5.3-3 [163 kB] Get: 288 http://deb.debian.org/debian bookworm/main amd64 python3-prometheus-client all 0.16.0-0.1 [45.2 kB] Get: 289 http://deb.debian.org/debian bookworm/main amd64 python3-send2trash all 1.8.1~b0-2 [16.3 kB] Get: 290 http://deb.debian.org/debian bookworm/main amd64 python3-notebook all 6.4.12-2.2 [1406 kB] Get: 291 http://deb.debian.org/debian bookworm/main amd64 python3-widgetsnbextension all 6.0.0-11 [6168 B] Get: 292 http://deb.debian.org/debian bookworm/main amd64 python3-ipywidgets all 6.0.0-11 [31.8 kB] Get: 293 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.4.4-1+b1 [60.1 kB] Get: 294 http://deb.debian.org/debian bookworm/main amd64 python3-lockfile all 1:0.12.2-2.2 [17.3 kB] Get: 295 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.4.0-1.1+b1 [472 kB] Get: 296 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.11.2-3 [98.3 kB] Get: 297 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.4.0-1.1+b1 [74.4 kB] Get: 298 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.6.3-1+b1 [6921 kB] Get: 299 http://deb.debian.org/debian bookworm/main amd64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 300 http://deb.debian.org/debian bookworm/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 301 http://deb.debian.org/debian bookworm/main amd64 python3-networkx all 2.8.8-1 [1425 kB] Get: 302 http://deb.debian.org/debian bookworm/main amd64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 303 http://deb.debian.org/debian bookworm/main amd64 python3-pytest all 7.2.1-2 [236 kB] Get: 304 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-cov all 4.0.0-1 [26.1 kB] Get: 305 http://deb.debian.org/debian bookworm/main amd64 python3-pytz-deprecation-shim all 0.1.0.post0-3 [14.4 kB] Get: 306 http://deb.debian.org/debian bookworm/main amd64 python3-seaborn all 0.12.2-1 [215 kB] Get: 307 http://deb.debian.org/debian bookworm/main amd64 python3-skbio amd64 0.5.8-4 [727 kB] Get: 308 http://deb.debian.org/debian bookworm/main amd64 python3-tzlocal all 4.2-1 [24.6 kB] Get: 309 http://deb.debian.org/debian bookworm/main amd64 python3-yaml amd64 6.0-3+b2 [119 kB] Get: 310 http://deb.debian.org/debian bookworm/main amd64 qiime all 2022.11.1-2 [183 kB] Get: 311 http://deb.debian.org/debian bookworm/main amd64 q2templates all 2022.11.1+ds-2 [12.6 kB] Get: 312 http://deb.debian.org/debian bookworm/main amd64 q2-types all 2022.11.1-2 [78.2 kB] Get: 313 http://deb.debian.org/debian bookworm/main amd64 q2-feature-table all 2022.11.1+dfsg-2 [184 kB] Get: 314 http://deb.debian.org/debian bookworm/main amd64 q2-taxa all 2022.11.1+dfsg-2 [44.0 kB] Get: 315 http://deb.debian.org/debian bookworm/main amd64 samtools amd64 1.16.1-1 [607 kB] Get: 316 http://deb.debian.org/debian bookworm/main amd64 vsearch amd64 2.22.1-1 [378 kB] Fetched 181 MB in 9s (21.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19591 files and directories currently installed.) Preparing to unpack .../0-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package ucf. Preparing to unpack .../1-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package libdebuginfod-common. 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Setting up libmbedcrypto7:amd64 (2.28.3-1) ... Setting up libx11-data (2:1.8.4-2) ... Setting up node-jed (1.1.1-4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libjs-xterm (3.8.1+~cs0.9.0-1) ... Setting up libncurses6:amd64 (6.4-4) ... Setting up liblzf1:amd64 (3.6-3) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libboost-regex1.74.0:amd64 (1.74.0+ds1-21) ... Setting up libimagequant0:amd64 (2.17.0-1) ... Setting up libjs-codemirror (5.65.0+~cs5.83.9-2) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up autopoint (0.21-12) ... Setting up libjs-jed (1.1.1-4) ... Setting up libipt2 (2.0.5-1) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.2.4-0.2) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:amd64 (4.5.0-6) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up python-tinycss2-common (1.2.1-2) ... Setting up libopenjp2-7:amd64 (2.5.0-2) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up openssl (3.0.9-1) ... Setting up libwebpmux3:amd64 (1.2.4-0.2) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up node-normalize.css (8.0.1-5) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libssw0:amd64 (1.1-13) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up node-thenby (1.3.4+git20200720.0fd165a+ds-3) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libsource-highlight4v5:amd64 (3.1.9-4.2+b3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libjs-marked (4.2.3+ds+~4.0.7-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libdw1:amd64 (0.188-2.1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libzmq5:amd64 (4.3.4-6) ... Setting up libmbedx509-1:amd64 (2.28.3-1) ... Setting up libmbedtls14:amd64 (2.28.3-1) ... Setting up libtool (2.4.7-5) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libwebpdemux2:amd64 (1.2.4-0.2) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libjs-bootstrap-tour (0.12.0+dfsg-5) ... Setting up libjs-backbone (1.4.1~dfsg+~1.4.15-3) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5) ... Setting up libjs-jquery-metadata (12-4) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up ucf (3.0043+nmu1) ... Setting up libbabeltrace1:amd64 (1.5.11-1+b2) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... Setting up libopenblas0:amd64 (0.3.21+ds-4) ... Setting up groff-base (1.22.4-10) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up libcurl4:amd64 (7.88.1-10) ... Setting up libx11-6:amd64 (2:1.8.4-2) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libdebuginfod-common (0.188-2.1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libcurl3-gnutls:amd64 (7.88.1-10) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libopenblas-dev:amd64 (0.3.21+ds-4) ... Setting up libraqm0:amd64 (0.7.0-4.1) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up python3.11 (3.11.2-6) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libhts3:amd64 (1.16+ds-3) ... Setting up libpython3.11:amd64 (3.11.2-6) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up libdebuginfod1:amd64 (0.188-2.1) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-pandocfilters (1.5.0-1) ... Setting up python3-markupsafe (2.1.2-1+b1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up python3-psutil (5.9.4-1+b1) ... Setting up python3-tz (2022.7.1-4) ... Setting up python3-natsort (8.0.2-2) ... Setting up samtools (1.16.1-1) ... Setting up bowtie2 (2.5.0-3+b2) ... Setting up ncbi-blast+ (2.12.0+ds-3+b1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-decorator (5.1.1-3) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-packaging (23.0-1) ... Setting up gdb (13.1-3) ... Setting up python3-wcwidth (0.2.5+dfsg1-1.1) ... Setting up python3-pyparsing (3.0.9-1) ... Setting up python3-certifi (2022.9.24-1) ... Setting up libpython3.11-dev:amd64 (3.11.2-6) ... Setting up python3-nest-asyncio (1.5.4-1) ... Setting up python3-dill (0.3.6-1) ... Setting up python3-brotli (1.0.9-2+b6) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-bytecode (0.14.0-2) ... Setting up python3-kiwisolver (1.4.4-1+b1) ... Setting up python3-idna (3.3-1) ... Setting up cython3 (0.29.32-2+b1) ... Setting up python3-html5lib (1.1-3) ... Setting up python3-pickleshare (0.7.5-5) ... Setting up python3-urllib3 (1.26.12-1) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up python3-fastjsonschema (2.16.3-2) ... Setting up python3-pyrsistent:amd64 (0.18.1-1+b3) ... Setting up python3-lxml:amd64 (4.9.2-1+b1) ... Setting up python3-traitlets (5.5.0-1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-msgpack (1.0.3-2+b1) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-lib2to3 (3.11.2-3) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-soupsieve (2.3.2-1) ... Setting up python3-cffi-backend:amd64 (1.15.1-5+b1) ... Setting up python3-ptyprocess (0.7.0-5) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-entrypoints (0.4-2) ... Setting up python3-prompt-toolkit (3.0.36-2) ... Setting up python3-distutils (3.11.2-3) ... Setting up dh-python (5.20230130) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.11.1-1) ... Setting up python3-attr (22.2.0-1) ... Setting up python3-lockfile (1:0.12.2-2.2) ... Setting up python3-tornado (6.2.0-3) ... Setting up python3-pure-eval (0.2.2-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up python3-send2trash (1.8.1~b0-2) ... Setting up python3-tinycss2 (1.2.1-2) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-py (1.11.0-1) ... Setting up python3-backcall (0.2.0-4) ... Setting up python3-ijson (3.2.0-1) ... Setting up python3-parso (0.8.3-1) ... Setting up python3-colorama (0.4.6-2) ... Setting up python3-lz4 (4.0.2+dfsg-1+b2) ... Setting up python3-public (2.3-4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-ipython-genutils (0.2.0-5) ... Setting up python3-asttokens (2.2.1-1) ... Setting up python3-pytz-deprecation-shim (0.1.0.post0-3) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-charset-normalizer (3.0.1-2) ... Setting up python3-pytest (7.2.1-2) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-coverage (6.5.0+dfsg1-2+b1) ... Setting up python3-yaml (6.0-3+b2) ... Setting up python3-tk:amd64 (3.11.2-3) ... Setting up python3-pytest-cov (4.0.0-1) ... Setting up python3-click (8.1.3-2) ... Setting up python3-networkx (2.8.8-1) ... Setting up python3-bs4 (4.11.2-2) ... Setting up python3-bleach (5.0.1-2) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-fs (2.4.16-2) ... Setting up python3-flufl.lock (5.0.1-4) ... Setting up python3-beniget (0.4.1-3) ... Setting up python3-prometheus-client (0.16.0-0.1) ... Setting up python3-pygments (2.14.0+dfsg-1) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up python3-jsonschema (4.10.3-1) ... Setting up python3-executing (1.2.0-2) ... Setting up libpython3-all-dev:amd64 (3.11.2-1+b1) ... Setting up python3-pexpect (4.8.0-4) ... Setting up python3-zmq (24.0.1-4+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-requests (2.28.1+dfsg-1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-terminado (0.17.0-1) ... Setting up python3-hdmedians (0.14.2-5+b1) ... Setting up python3-argon2 (21.1.0-2) ... Setting up python3-contourpy (1.0.7-1+b1) ... Setting up python3-cachecontrol (0.12.12-2) ... Setting up python3-pydevd (2.9.5+ds-4) ... Setting up python3-future (0.18.2-6) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-tzlocal (4.2-1) ... Setting up python3-stack-data (0.6.2-3) ... Setting up python3-jupyter-core (4.12.0-1) ... Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-jedi (0.18.2-1) ... Setting up python3-pandas-lib:amd64 (1.5.3+dfsg-2) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up python3-nbformat (5.5.0-1) ... Setting up python3-debugpy (1.6.6+ds-1) ... Setting up python3-jupyterlab-pygments (0.2.2-3) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Setting up python3-ipython (8.5.0-4) ... Setting up python3-h5py (3.7.0-8) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-jupyter-client (7.4.9-2) ... Setting up python3-bibtexparser (1.1.0+ds-5) ... Setting up python3-scipy (1.10.1-2) ... Setting up q2templates (2022.11.1+ds-2) ... Setting up python3-nbclient (0.7.2-1) ... Setting up qiime (2022.11.1-2) ... Setting up python3-biom-format (2.1.12-3+b1) ... Setting up python3-ipykernel (6.17.0-1) ... Setting up python3-nbconvert (6.5.3-3) ... Setting up python3-notebook (6.4.12-2.2) ... Setting up python3-widgetsnbextension (6.0.0-11) ... Setting up python3-ipywidgets (6.0.0-11) ... Setting up python3-pil:amd64 (9.4.0-1.1+b1) ... Setting up python3-pil.imagetk:amd64 (9.4.0-1.1+b1) ... Setting up python3-fonttools (4.38.0-1+b1) ... Setting up python3-ufolib2 (0.14.0+dfsg1-1) ... Setting up python3-matplotlib (3.6.3-1+b1) ... Setting up python3-seaborn (0.12.2-1) ... Setting up python3-skbio (0.5.8-4) ... Setting up q2-types (2022.11.1-2) ... Setting up q2-feature-table (2022.11.1+dfsg-2) ... Setting up q2-taxa (2022.11.1+dfsg-2) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/q2-quality-control-2022.11.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../q2-quality-control_2022.11.1-2_source.changes dpkg-buildpackage: info: source package q2-quality-control dpkg-buildpackage: info: source version 2022.11.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/q2-quality-control-2022.11.1' dh_auto_clean I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf __pycache__ q2_quality_control.egg-info .pytest_cache make[1]: Leaving directory '/build/q2-quality-control-2022.11.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/quality_control.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/plugin_setup.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_version.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_utilities.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_filter.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_evaluate_taxonomy.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_evaluate_seqs.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/_blast.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control copying q2_quality_control/__init__.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control creating /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests copying q2_quality_control/tests/test_quality_control.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests copying q2_quality_control/tests/test_filter.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests copying q2_quality_control/tests/__init__.py -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests copying q2_quality_control/citations.bib -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control creating /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/assets copying q2_quality_control/assets/index.html -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/assets creating /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/test_evaluate_seqs_part_rand.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/test_evaluate_seqs_mismatches.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/test_evaluate_seqs_identical.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/single-end.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/sars2-indexed.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/sars2-genome.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/query-sequences.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/query-sequences-with-mismatch.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/query-sequences-short.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/query-sequences-left-justified.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/query-partially-random.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/qc-mock-3-observed.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/qc-mock-3-expected.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/paired-end.qza -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/mock-3-results.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/mock-3-observed-taxonomy.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/mock-3-obs-table.biom -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/mock-3-expected-taxonomy.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/fungal-ref-sequences.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/fungal-query-sequences.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/exp-results.tsv -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/bacterial-ref-sequences.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data copying q2_quality_control/tests/data/bacterial-query-sequences.fasta -> /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data UPDATING /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_version.py set /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_version.py to '2022.11.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/q2-quality-control-2022.11.1' dh_auto_test -- -s custom --test-args="cd {build_dir}; py.test-3 --cov=q2_quality_control" || true I: pybuild pybuild:307: python3.11 setup.py develop --install-dir /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build running develop /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:146: EasyInstallDeprecationWarning: easy_install command is deprecated. Use build and pip and other standards-based tools. warnings.warn( /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running egg_info creating q2_quality_control.egg-info writing q2_quality_control.egg-info/PKG-INFO writing dependency_links to q2_quality_control.egg-info/dependency_links.txt writing entry points to q2_quality_control.egg-info/entry_points.txt writing top-level names to q2_quality_control.egg-info/top_level.txt writing manifest file 'q2_quality_control.egg-info/SOURCES.txt' reading manifest file 'q2_quality_control.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'q2_quality_control.egg-info/SOURCES.txt' running build_ext Creating /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2-quality-control.egg-link (link to .) Adding q2-quality-control 2022.11.1 to easy-install.pth file Installed /build/q2-quality-control-2022.11.1 Processing dependencies for q2-quality-control==2022.11.1 Finished processing dependencies for q2-quality-control==2022.11.1 I: pybuild base:240: cd /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build; py.test-3 --cov=q2_quality_control ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack rootdir: /build/q2-quality-control-2022.11.1 plugins: cov-4.0.0 collected 79 items q2_quality_control/tests/test_filter.py FFFFF [ 6%] q2_quality_control/tests/test_quality_control.py FFFFFFFFFFFFFFFFFFFFFFF [ 35%] FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF [100%] =================================== FAILURES =================================== _________________________ TestBowtie2Build.test_build __________________________ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ TestFilterSingle.test_filter_single_exclude_seqs _______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_filter.py:40: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ TestFilterSingle.test_filter_single_keep_seqs _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_filter.py:40: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ TestFilterPaired.test_filter_paired_exclude_seqs _______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_filter.py:82: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ TestFilterPaired.test_filter_paired_keep_seqs _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_filter.py:82: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ BlastTests.test_exclude_seqs_96_perc_identity _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ BlastTests.test_exclude_seqs_97_perc_identity _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ BlastTests.test_exclude_seqs_99_perc_identity _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____________________ BlastTests.test_exclude_seqs_all_hit _____________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________________ BlastTests.test_exclude_seqs_all_miss _____________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ BlastTests.test_exclude_seqs_bacterial_hit_fungal_miss ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ BlastTests.test_exclude_seqs_fungal_hit_bacterial_miss ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ BlastTests.test_exclude_seqs_left_justify_value_error _____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ VsearchTests.test_exclude_seqs_96_perc_identity ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ VsearchTests.test_exclude_seqs_97_perc_identity ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ VsearchTests.test_exclude_seqs_99_perc_identity ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________________ VsearchTests.test_exclude_seqs_all_hit ____________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________________ VsearchTests.test_exclude_seqs_all_miss ____________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________ VsearchTests.test_exclude_seqs_bacterial_hit_fungal_miss ___________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________ VsearchTests.test_exclude_seqs_fungal_hit_bacterial_miss ___________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ VsearchTests.test_exclude_seqs_left_justify_hits _______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______________ VsearchTests.test_exclude_seqs_left_justify_missed ______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_blast_low_evalue_discards_weak_matches _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_high_evalue_low_perc_query_aligned_permissive _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_short_seqs_hit_with_blastn_short _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_short_seqs_hit_with_default_vsearch _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_short_seqs_miss_with_blastn_short_low_eval _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ SequenceQualityControlTests.test_exclude_seqs_short_seqs_miss_with_default_blast _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:184: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:62: in setUp super().setUp() q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______________________ UtilitiesTests.test_collapse_table ______________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. __________________ UtilitiesTests.test_compute_taxon_accuracy __________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____________ UtilitiesTests.test_compute_taxon_accuracy_all_match _____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ UtilitiesTests.test_compute_taxon_accuracy_no_matches _____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____________________ UtilitiesTests.test_drop_nans_zeros ______________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ UtilitiesTests.test_identify_incorrect_classifications ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ UtilitiesTests.test_interpret_metric_selection_invalid ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____________ UtilitiesTests.test_interpret_metric_selection_valid _____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. __________________ UtilitiesTests.test_match_samples_by_index __________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _________________ UtilitiesTests.test_tally_misclassifications _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ UtilitiesTests.test_tally_misclassifications_all_match ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____________ UtilitiesTests.test_tally_misclassifications_no_match _____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ UtilitiesTests.test_validate_metadata_and_exp_table_md_superset_vals_subset __ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. __ UtilitiesTests.test_validate_metadata_and_exp_table_metadata_not_superset ___ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ UtilitiesTests.test_validate_metadata_and_exp_table_metadata_values_not_subset _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:56: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ EvaluateSeqsTests.test_evaluate_seqs_identical ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ EvaluateSeqsTests.test_evaluate_seqs_mismatches ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ________________ EvaluateSeqsTests.test_evaluate_seqs_part_rand ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _________________ EvaluateSeqsTests.test_evaluate_seqs_plugin __________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:62: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________ NCLUtilitiesTests.test_find_nearest_common_lineage_match ___________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:382: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____ NCLUtilitiesTests.test_find_nearest_common_lineage_misclassification _____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:382: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _________ NCLUtilitiesTests.test_find_nearest_common_lineage_no_match __________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:382: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ NCLUtilitiesTests.test_find_nearest_common_lineage_overclassification _____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:382: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ NCLUtilitiesTests.test_find_nearest_common_lineage_underclassification ____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:382: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________ EvaluateCompositionTests.test_compute_per_level_accuracy ___________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. __ EvaluateCompositionTests.test_compute_per_level_accuracy_vector_length_one __ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______________ EvaluateCompositionTests.test_evaluate_composition ______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______ EvaluateCompositionTests.test_evaluate_composition_depth_too_high _______ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___ EvaluateCompositionTests.test_evaluate_composition_dont_test_all_levels ____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateCompositionTests.test_evaluate_composition_metadata_map_to_mock_sample _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___ EvaluateCompositionTests.test_evaluate_composition_metadata_not_superset ___ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateCompositionTests.test_evaluate_composition_metadata_values_not_subset _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. __________ EvaluateCompositionTests.test_plugin_evaluate_composition ___________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:410: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateCompositionMockrobiotaDataTests.test_evaluate_composition_mockrobiota _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:550: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateCompositionMockrobiotaDataTests.test_evaluate_composition_mockrobiota_metadata_map _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:550: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _________________ EvaluateTaxonomyTests.test_evaluate_taxonomy _________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______________ EvaluateTaxonomyTests.test_evaluate_taxonomy_basic ______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateTaxonomyTests.test_evaluate_taxonomy_plus_table_missing_features_in_table_FAIL _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _____ EvaluateTaxonomyTests.test_evaluate_taxonomy_plus_table_no_sample_id _____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______ EvaluateTaxonomyTests.test_evaluate_taxonomy_sample_id_no_table ________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ EvaluateTaxonomyTests.test_evaluate_taxonomy_sample_id_not_found_FAIL _____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ______ EvaluateTaxonomyTests.test_evaluate_taxonomy_sample_id_plus_table _______ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ EvaluateTaxonomyTests.test_index_is_subset_FALSE _______________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _______________ EvaluateTaxonomyTests.test_index_is_subset_TRUE ________________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ___________ EvaluateTaxonomyTests.test_index_is_subset_equal_series ____________ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_equal ____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_inner ____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_left _____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_require_exp_id_FAIL _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. _ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_require_obs_id_FAIL _ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. ____ EvaluateTaxonomyTests.test_validate_indices_and_set_joining_mode_right ____ self = def setUp(self): > super().setUp() q2_quality_control/tests/test_quality_control.py:628: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ q2_quality_control/tests/test_quality_control.py:56: in setUp super().setUp() /usr/lib/python3/dist-packages/qiime2/plugin/testing.py:65: in setUp self.fail('%s is not a registered QIIME 2 plugin.' % package) E AssertionError: q2_quality_control is not a registered QIIME 2 plugin. =============================== warnings summary =============================== ../../../../../usr/lib/python3/dist-packages/ipywidgets/widgets/widget_link.py:19 ../../../../../usr/lib/python3/dist-packages/ipywidgets/widgets/widget_link.py:19 /usr/lib/python3/dist-packages/ipywidgets/widgets/widget_link.py:19: DeprecationWarning: Traits should be given as instances, not types (for example, `Int()`, not `Int`) Passing types is deprecated in traitlets 4.1. super(WidgetTraitTuple, self).__init__(Instance(Widget), Unicode, **kwargs) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ---------- coverage: platform linux, python 3.11.2-final-0 ----------- Name Stmts Miss Cover ---------------------------------------------------------------------- q2_quality_control/__init__.py 3 0 100% q2_quality_control/_blast.py 50 41 18% q2_quality_control/_evaluate_seqs.py 28 21 25% q2_quality_control/_evaluate_taxonomy.py 73 64 12% q2_quality_control/_filter.py 62 62 0% q2_quality_control/_utilities.py 242 206 15% q2_quality_control/_version.py 4 0 100% q2_quality_control/plugin_setup.py 27 27 0% q2_quality_control/quality_control.py 38 25 34% q2_quality_control/tests/__init__.py 0 0 100% q2_quality_control/tests/test_filter.py 72 51 29% q2_quality_control/tests/test_quality_control.py 357 235 34% ---------------------------------------------------------------------- TOTAL 956 732 23% =========================== short test summary info ============================ FAILED q2_quality_control/tests/test_filter.py::TestBowtie2Build::test_build FAILED q2_quality_control/tests/test_filter.py::TestFilterSingle::test_filter_single_exclude_seqs FAILED q2_quality_control/tests/test_filter.py::TestFilterSingle::test_filter_single_keep_seqs FAILED q2_quality_control/tests/test_filter.py::TestFilterPaired::test_filter_paired_exclude_seqs FAILED q2_quality_control/tests/test_filter.py::TestFilterPaired::test_filter_paired_keep_seqs FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_96_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_97_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_99_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_all_hit FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_all_miss FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_bacterial_hit_fungal_miss FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_fungal_hit_bacterial_miss FAILED q2_quality_control/tests/test_quality_control.py::BlastTests::test_exclude_seqs_left_justify_value_error FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_96_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_97_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_99_perc_identity FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_all_hit FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_all_miss FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_bacterial_hit_fungal_miss FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_fungal_hit_bacterial_miss FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_left_justify_hits FAILED q2_quality_control/tests/test_quality_control.py::VsearchTests::test_exclude_seqs_left_justify_missed FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_blast_low_evalue_discards_weak_matches FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_high_evalue_low_perc_query_aligned_permissive FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_short_seqs_hit_with_blastn_short FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_short_seqs_hit_with_default_vsearch FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_short_seqs_miss_with_blastn_short_low_eval FAILED q2_quality_control/tests/test_quality_control.py::SequenceQualityControlTests::test_exclude_seqs_short_seqs_miss_with_default_blast FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_collapse_table FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_compute_taxon_accuracy FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_compute_taxon_accuracy_all_match FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_compute_taxon_accuracy_no_matches FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_drop_nans_zeros FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_identify_incorrect_classifications FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_interpret_metric_selection_invalid FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_interpret_metric_selection_valid FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_match_samples_by_index FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_tally_misclassifications FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_tally_misclassifications_all_match FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_tally_misclassifications_no_match FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_validate_metadata_and_exp_table_md_superset_vals_subset FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_validate_metadata_and_exp_table_metadata_not_superset FAILED q2_quality_control/tests/test_quality_control.py::UtilitiesTests::test_validate_metadata_and_exp_table_metadata_values_not_subset FAILED q2_quality_control/tests/test_quality_control.py::EvaluateSeqsTests::test_evaluate_seqs_identical FAILED q2_quality_control/tests/test_quality_control.py::EvaluateSeqsTests::test_evaluate_seqs_mismatches FAILED q2_quality_control/tests/test_quality_control.py::EvaluateSeqsTests::test_evaluate_seqs_part_rand FAILED q2_quality_control/tests/test_quality_control.py::EvaluateSeqsTests::test_evaluate_seqs_plugin FAILED q2_quality_control/tests/test_quality_control.py::NCLUtilitiesTests::test_find_nearest_common_lineage_match FAILED q2_quality_control/tests/test_quality_control.py::NCLUtilitiesTests::test_find_nearest_common_lineage_misclassification FAILED q2_quality_control/tests/test_quality_control.py::NCLUtilitiesTests::test_find_nearest_common_lineage_no_match FAILED q2_quality_control/tests/test_quality_control.py::NCLUtilitiesTests::test_find_nearest_common_lineage_overclassification FAILED q2_quality_control/tests/test_quality_control.py::NCLUtilitiesTests::test_find_nearest_common_lineage_underclassification FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_compute_per_level_accuracy FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_compute_per_level_accuracy_vector_length_one FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition_depth_too_high FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition_dont_test_all_levels FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition_metadata_map_to_mock_sample FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition_metadata_not_superset FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_evaluate_composition_metadata_values_not_subset FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionTests::test_plugin_evaluate_composition FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionMockrobiotaDataTests::test_evaluate_composition_mockrobiota FAILED q2_quality_control/tests/test_quality_control.py::EvaluateCompositionMockrobiotaDataTests::test_evaluate_composition_mockrobiota_metadata_map FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_basic FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_plus_table_missing_features_in_table_FAIL FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_plus_table_no_sample_id FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_sample_id_no_table FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_sample_id_not_found_FAIL FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_evaluate_taxonomy_sample_id_plus_table FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_index_is_subset_FALSE FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_index_is_subset_TRUE FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_index_is_subset_equal_series FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_equal FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_inner FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_left FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_require_exp_id_FAIL FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_require_obs_id_FAIL FAILED q2_quality_control/tests/test_quality_control.py::EvaluateTaxonomyTests::test_validate_indices_and_set_joining_mode_right ======================= 79 failed, 2 warnings in 34.41s ======================== E: pybuild pybuild:388: test: plugin custom failed with: exit code=1: cd /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build; py.test-3 --cov=q2_quality_control dh_auto_test: error: pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd {build_dir}; py.test-3 --cov=q2_quality_control" returned exit code 13 make[1]: Leaving directory '/build/q2-quality-control-2022.11.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/q2-quality-control/ -O--buildsystem=pybuild I: pybuild pybuild:307: rm -rvf /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2-feature-table.egg-* /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/site.py /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/.coverage* /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/easy-install.pth removed '/build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/.coverage' removed '/build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/easy-install.pth' I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/q2-quality-control-2022.11.1/debian/q2-quality-control running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py UPDATING /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_version.py set /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_version.py to '2022.11.1' running install_lib creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11 creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2-quality-control.egg-link -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_version.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/_evaluate_taxonomy.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/_evaluate_seqs.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/_utilities.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/_blast.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/quality_control.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/_version.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__pycache__/__init__.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__pycache__ creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/assets copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/assets/index.html -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/assets copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/citations.bib -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/__pycache__/test_quality_control.cpython-311-pytest-7.2.1.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/__pycache__/test_filter.cpython-311-pytest-7.2.1.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/__pycache__ copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/__pycache__/__init__.cpython-311.pyc -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/__pycache__ creating /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/bacterial-query-sequences.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/bacterial-ref-sequences.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/exp-results.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/fungal-query-sequences.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/fungal-ref-sequences.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/mock-3-expected-taxonomy.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/mock-3-obs-table.biom -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/mock-3-observed-taxonomy.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/mock-3-results.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/paired-end.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/qc-mock-3-expected.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/qc-mock-3-observed.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/query-partially-random.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/query-sequences-left-justified.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/query-sequences-short.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/query-sequences-with-mismatch.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/query-sequences.fasta -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/sars2-genome.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/sars2-indexed.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/single-end.qza -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/test_evaluate_seqs_identical.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/test_evaluate_seqs_mismatches.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/data/test_evaluate_seqs_part_rand.tsv -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/data copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/__init__.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/test_filter.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/tests/test_quality_control.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/__init__.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_blast.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_evaluate_seqs.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_evaluate_taxonomy.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_filter.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/_utilities.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/plugin_setup.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control copying /build/q2-quality-control-2022.11.1/.pybuild/cpython3_3.11/build/q2_quality_control/quality_control.py -> /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_version.py to _version.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/test_filter.py to test_filter.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/tests/test_quality_control.py to test_quality_control.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/__init__.py to __init__.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_blast.py to _blast.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_evaluate_seqs.py to _evaluate_seqs.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_evaluate_taxonomy.py to _evaluate_taxonomy.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_filter.py to _filter.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/_utilities.py to _utilities.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/plugin_setup.py to plugin_setup.cpython-311.pyc byte-compiling /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control/quality_control.py to quality_control.cpython-311.pyc running install_egg_info running egg_info writing q2_quality_control.egg-info/PKG-INFO writing dependency_links to q2_quality_control.egg-info/dependency_links.txt writing entry points to q2_quality_control.egg-info/entry_points.txt writing top-level names to q2_quality_control.egg-info/top_level.txt reading manifest file 'q2_quality_control.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'q2_quality_control.egg-info/SOURCES.txt' Copying q2_quality_control.egg-info to /build/q2-quality-control-2022.11.1/debian/q2-quality-control/usr/lib/python3.11/dist-packages/q2_quality_control-2022.11.1.egg-info Skipping SOURCES.txt running install_scripts debian/rules override_dh_install make[1]: Entering directory '/build/q2-quality-control-2022.11.1' dh_install find debian -name q2-quality-control.egg-link -delete make[1]: Leaving directory '/build/q2-quality-control-2022.11.1' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package q2-quality-control: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'q2-quality-control' in '../q2-quality-control_2022.11.1-2_all.deb'. dpkg-genbuildinfo --build=binary -O../q2-quality-control_2022.11.1-2_amd64.buildinfo dpkg-genchanges --build=binary -O../q2-quality-control_2022.11.1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3600390 and its subdirectories I: Current time: Tue Jul 9 06:17:49 -12 2024 I: pbuilder-time-stamp: 1720549069 Wed Jun 7 11:54:31 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Wed Jun 7 11:54:31 UTC 2023 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Wed Jun 7 11:57:30 UTC 2023 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Wed Jun 7 11:57:30 UTC 2023 I: q2-quality-control_2022.11.1-2_amd64.changes: Format: 1.8 Date: Tue, 24 Jan 2023 18:52:30 +0100 Source: q2-quality-control Binary: q2-quality-control Architecture: all Version: 2022.11.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: q2-quality-control - QIIME 2 plugin for quality assurance of feature and sequence data Changes: q2-quality-control (2022.11.1-2) unstable; urgency=medium . * Team upload * Upload to unstable Checksums-Sha1: 8aa2b0bd33fece76ea47765c39e2290c34e8feae 248220 q2-quality-control_2022.11.1-2_all.deb 4e376b6926c6100b22e47ddf02b3b2dd9fc83ada 14313 q2-quality-control_2022.11.1-2_amd64.buildinfo Checksums-Sha256: a0bafdde0d3d504954b9b51ae46d3bbbb9b05b11576bc070d9f442c59ae42edb 248220 q2-quality-control_2022.11.1-2_all.deb a6952101e97b9c5878ba4423298ed7c51ac3f8d389f9834cbba1c665812695d3 14313 q2-quality-control_2022.11.1-2_amd64.buildinfo Files: 43ac3992e236a03bcbb17b72e0962b1a 248220 science optional q2-quality-control_2022.11.1-2_all.deb 978f18e64e98adb3621e79fbccfbf25a 14313 science optional q2-quality-control_2022.11.1-2_amd64.buildinfo Wed Jun 7 11:57:31 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/q2-quality-control_2022.11.1-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/q2-quality-control_2022.11.1-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/q2-quality-control_2022.11.1-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/b1/q2-quality-control_2022.11.1-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.XwfUR7Lr/b2/q2-quality-control_2022.11.1-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.331s) 0.331s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Wed Jun 7 11:57:32 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Wed Jun 7 11:57:32 UTC 2023 I: q2-quality-control from bookworm built successfully and reproducibly on amd64. Wed Jun 7 11:57:34 UTC 2023 I: Submitting .buildinfo files to external archives: Wed Jun 7 11:57:34 UTC 2023 I: Submitting 16K b1/q2-quality-control_2022.11.1-2_amd64.buildinfo.asc Wed Jun 7 11:57:36 UTC 2023 I: Submitting 16K b2/q2-quality-control_2022.11.1-2_amd64.buildinfo.asc Wed Jun 7 11:57:37 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Jun 7 11:57:37 UTC 2023 I: Done submitting .buildinfo files. Wed Jun 7 11:57:37 UTC 2023 I: Removing signed q2-quality-control_2022.11.1-2_amd64.buildinfo.asc files: removed './b1/q2-quality-control_2022.11.1-2_amd64.buildinfo.asc' removed './b2/q2-quality-control_2022.11.1-2_amd64.buildinfo.asc'