Sat May 20 01:25:51 UTC 2023 I: starting to build octave-stk/bookworm/amd64 on jenkins on '2023-05-20 01:25' Sat May 20 01:25:51 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_14/20946/console.log Sat May 20 01:25:51 UTC 2023 I: Downloading source for bookworm/octave-stk=2.7.0-3 --2023-05-20 01:25:51-- http://cdn-fastly.deb.debian.org/debian/pool/main/o/octave-stk/octave-stk_2.7.0-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2141 (2.1K) [text/prs.lines.tag] Saving to: ‘octave-stk_2.7.0-3.dsc’ 0K .. 100% 147M=0s 2023-05-20 01:25:51 (147 MB/s) - ‘octave-stk_2.7.0-3.dsc’ saved [2141/2141] Sat May 20 01:25:51 UTC 2023 I: octave-stk_2.7.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: octave-stk Binary: octave-stk Architecture: any Version: 2.7.0-3 Maintainer: Debian Octave Group Uploaders: Julien Bect , Homepage: https://octave.sourceforge.io/stk/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/pkg-octave-team/octave-stk Vcs-Git: https://salsa.debian.org/pkg-octave-team/octave-stk.git Testsuite: autopkgtest-pkg-octave Build-Depends: debhelper-compat (= 13), dh-sequence-octave Package-List: octave-stk deb math optional arch=any Checksums-Sha1: f8063a77b2cc7e79cda3623a412cbbff5471bd38 384392 octave-stk_2.7.0.orig.tar.gz b1eedc3d47c12878e29ba5f7c6c6ccd9151a73a5 5020 octave-stk_2.7.0-3.debian.tar.xz Checksums-Sha256: bc87fe5c32ef2cd38cc29b450a08aa7e5fa8dcf210f8a2e9b0984e02b77b80c3 384392 octave-stk_2.7.0.orig.tar.gz 704f66f8d3afa1cd842fac6804629268ee6d42673a09b7d78e5b4b61482bb8ae 5020 octave-stk_2.7.0-3.debian.tar.xz Files: 59877e12af0e342adec3bc8150ea2685 384392 octave-stk_2.7.0.orig.tar.gz b68f7984a25c07ecc4ec4624df7d6d1e 5020 octave-stk_2.7.0-3.debian.tar.xz Dgit: 4dbc90163bd9329f22573560bee56fb96eab9080 debian archive/debian/2.7.0-3 https://git.dgit.debian.org/octave-stk -----BEGIN PGP SIGNATURE----- iQJGBAEBCAAwFiEEP0ZDkUmP6HS9tdmPISSqGYN4XJAFAmOPAL4SHHJhZmFlbEBk ZWJpYW4ub3JnAAoJECEkqhmDeFyQRQYP/ifRbWgiKhuHXK2kvYsLCmTIRZX4+pBX cVbYkmN6jJNyL3pZnlosOlTbbWu61Q9QhU1+W+ijq6vgehFkIH281/FWJFX/MSOG CU/rhA06OeO3b3GQOwHpML2krCKMq0TacbHBtlBpW9x5Ft/pQgMNIZy+vP1Kkrne JdX7BAdkq0yspy/ivEuZr64qVJ9gvI9sS9G2wKyX0pH9yTw/ZhT5PkC73J8DNVSh nSwe5P4NQEj+2cm3qDvDylLCEZHI08wfQxRT4rwjQE46dl8Ybg4nocWt0QLNE239 Typ/jUE0pNgjSUHYT/sJy74xRESkcFmCkiLX5jC4BFE3i437QRpGtVkcvRwgbhvt WGDTcIoiZMuXfKkhE55G53qKKbR4qaPRH3685KVOB0io/wW+/3xbTU/Y3ICYjs5N Yy2cv6bxYFmhd2Qzq7W4tg7gAFuB8EAX88YcYDksnfkAgZ01dMjSAiM4u+v06Zmn 5tdxYCrwlNCY/KM8GY2zz7SAw/Lrhqps13n8OI6p2xTZkk1s6U5k86DfoyDfhNeH 3SbwIAb0u8k1k832O6Wn7Ba0M4X00CcqFH91SFO+UfDabRY2lttnrnvdYUYLeMDL /nD+nMaoi+pIHYDmDXN4OP0Ai9Z9m5ElIYl0X5sahu/fdMDCLoeNLwX4FdmOdJ3J yMekktbCn8QM =frEq -----END PGP SIGNATURE----- Sat May 20 01:25:51 UTC 2023 I: Checking whether the package is not for us Sat May 20 01:25:51 UTC 2023 I: Starting 1st build on remote node ionos5-amd64.debian.net. Sat May 20 01:25:51 UTC 2023 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Sat May 20 01:31:24 UTC 2023 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jun 20 19:48:54 -12 2024 I: pbuilder-time-stamp: 1718956134 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [octave-stk_2.7.0-3.dsc] I: copying [./octave-stk_2.7.0.orig.tar.gz] I: copying [./octave-stk_2.7.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 5 20:43:42 2022 -12 gpgv: using RSA key 3F464391498FE874BDB5D98F2124AA1983785C90 gpgv: issuer "rafael@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./octave-stk_2.7.0-3.dsc: no acceptable signature found dpkg-source: info: extracting octave-stk in octave-stk-2.7.0 dpkg-source: info: unpacking octave-stk_2.7.0.orig.tar.gz dpkg-source: info: unpacking octave-stk_2.7.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0003-Mark-expected-failure.patch dpkg-source: info: applying octave7.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3630502/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='85accee146bd426ab301a9a9365ab82c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3630502' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/pbuilderrc_6zP2 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/b1 --logfile b1/build.log octave-stk_2.7.0-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 6.1.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.15-1~bpo11+1 (2023-03-16) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3630502/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-octave dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-octave; however: Package dh-sequence-octave is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: aglfn{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cme{a} debhelper{a} dh-autoreconf{a} dh-octave{a} dh-octave-autopkgtest{a} dh-strip-nondeterminism{a} diffstat{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-freefont-otf{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} gnuplot-data{a} gnuplot-nox{a} gpg{a} gpgconf{a} groff-base{a} hdf5-helpers{a} ibverbs-providers{a} intltool-debian{a} iso-codes{a} libabsl20220623{a} libaec-dev{a} libaec0{a} libalgorithm-c3-perl{a} libaliased-perl{a} libamd2{a} libaom3{a} libapp-cmd-perl{a} libapt-pkg-perl{a} libarchive-zip-perl{a} libarpack2{a} libarray-intspan-perl{a} libasound2{a} libasound2-data{a} libassuan0{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif15{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libberkeleydb-perl{a} libblas-dev{a} libblas3{a} libboolean-perl{a} libbrotli1{a} libbsd0{a} libbtf1{a} libcairo2{a} libcamd2{a} libcapture-tiny-perl{a} libcarp-assert-more-perl{a} libcbor0.8{a} libccolamd2{a} libcgi-pm-perl{a} libcholmod3{a} libclass-c3-perl{a} libclass-data-inheritable-perl{a} libclass-load-perl{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-choose-perl{a} libclone-perl{a} libcolamd2{a} libcombblas1.16.0{a} libconfig-model-backend-yaml-perl{a} libconfig-model-dpkg-perl{a} libconfig-model-perl{a} libconfig-tiny-perl{a} libconst-fast-perl{a} libconvert-binhex-perl{a} libcpanel-json-xs-perl{a} libcups2{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-openssl-dev{a} libcxsparse3{a} libdata-compare-perl{a} libdata-dpath-perl{a} libdata-messagepack-perl{a} libdata-optlist-perl{a} libdata-section-perl{a} libdata-validate-domain-perl{a} libdata-validate-ip-perl{a} libdata-validate-uri-perl{a} libdatrie1{a} libdav1d6{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-size-perl{a} libdevel-stacktrace-perl{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libdynaloader-functions-perl{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libelf1{a} libemail-address-xs-perl{a} libencode-locale-perl{a} liberror-perl{a} libevdev2{a} libevent-core-2.1-7{a} libevent-pthreads-2.1-7{a} libexception-class-perl{a} libexpat1{a} libexporter-lite-perl{a} libexporter-tiny-perl{a} libfabric1{a} libfeature-compat-class-perl{a} libfeature-compat-try-perl{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-basedir-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libflac12{a} libfltk-gl1.3{a} libfltk1.3{a} libfont-ttf-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgetopt-long-descriptive-perl{a} libgfortran-12-dev{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libgl2ps1.4{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglpk40{a} libglu1-mesa{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgraphicsmagick++-q16-12{a} libgraphicsmagick-q16-3{a} libgraphite2-3{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhash-merge-perl{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libhdf5-openmpi-103-1{a} libheif1{a} libhtml-form-perl{a} libhtml-html5-entities-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tokeparser-simple-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-plugins{a} libhwloc15{a} libhwy1{a} libhypre-2.26.0{a} libibverbs1{a} libice6{a} libicu72{a} libimport-into-perl{a} libindirect-perl{a} libinput-bin{a} libinput10{a} libio-html-perl{a} libio-interactive-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libio-stringy-perl{a} libio-tiecombine-perl{a} libipc-run3-perl{a} libipc-system-simple-perl{a} libiterator-perl{a} libiterator-util-perl{a} libjack-jackd2-0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjson-maybexs-perl{a} libjson-perl{a} libjxl0.7{a} libklu1{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblist-compare-perl{a} liblist-moreutils-perl{a} liblist-moreutils-xs-perl{a} liblist-someutils-perl{a} liblist-utilsby-perl{a} libllvm15{a} liblog-any-adapter-screen-perl{a} liblog-any-perl{a} liblog-log4perl-perl{a} libltdl7{a} liblua5.4-0{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} liblz1{a} liblzo2-2{a} libmagic-mgc{a} libmagic1{a} libmailtools-perl{a} libmarkdown2{a} libmd4c0{a} libmetis5{a} libmime-tools-perl{a} libmldbm-perl{a} libmodule-implementation-perl{a} libmodule-pluggable-perl{a} libmodule-runtime-perl{a} libmoo-perl{a} libmoox-aliases-perl{a} libmouse-perl{a} libmousex-nativetraits-perl{a} libmousex-strictconstructor-perl{a} libmp3lame0{a} libmpg123-0{a} libmro-compat-perl{a} libmtdev1{a} libmumps-5.5{a} libmunge2{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnet-domain-tld-perl{a} libnet-http-perl{a} libnet-ipv6addr-perl{a} libnet-netmask-perl{a} libnet-smtp-ssl-perl{a} libnet-ssleay-perl{a} libnetaddr-ip-perl{a} libnghttp2-14{a} libnl-3-200{a} libnl-route-3-200{a} libnuma1{a} libobject-pad-perl{a} libogg0{a} libopengl-dev{a} libopengl0{a} libopenmpi3{a} libopus0{a} libpackage-stash-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libparams-util-perl{a} libparams-validate-perl{a} libparse-debcontrol-perl{a} libparse-recdescent-perl{a} libpath-iterator-rule-perl{a} libpath-tiny-perl{a} libpciaccess0{a} libpcre2-16-0{a} libpcre3{a} libperlio-gzip-perl{a} libperlio-utf8-strict-perl{a} libpetsc-real3.18{a} libpipeline1{a} libpixman-1-0{a} libpmix2{a} libpng16-16{a} libpod-constants-perl{a} libpod-parser-perl{a} libpod-pom-perl{a} libportaudio2{a} libproc-processtable-perl{a} libpsl5{a} libpsm-infinipath1{a} libpsm2-2{a} libpthread-stubs0-dev{a} libptscotch-7.0{a} libqhull-r8.0{a} libqrupdate1{a} libqscintilla2-qt5-15{a} libqscintilla2-qt5-l10n{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5help5{a} libqt5network5{a} libqt5printsupport5{a} libqt5sql5{a} libqt5widgets5{a} libqt5xml5{a} librav1e0{a} librdmacm1{a} libreadline-dev{a} libreadline8{a} libregexp-common-perl{a} libregexp-ipv6-perl{a} libregexp-pattern-license-perl{a} libregexp-pattern-perl{a} libregexp-wildcards-perl{a} librole-tiny-perl{a} librtmp1{a} libsamplerate0{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libsensors-config{a} libsensors5{a} libsereal-decoder-perl{a} libsereal-encoder-perl{a} libset-intspan-perl{a} libsm6{a} libsndfile1{a} libsoftware-license-perl{a} libsoftware-licensemoreutils-perl{a} libsort-versions-perl{a} libspqr2{a} libssh2-1{a} libssl-dev{a} libstrictures-perl{a} libstring-copyright-perl{a} libstring-escape-perl{a} libstring-license-perl{a} libstring-rewriteprefix-perl{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libsub-quote-perl{a} libsub-uplevel-perl{a} libsuitesparseconfig5{a} libsundials-ida6{a} libsundials-nvecparallel-petsc6{a} libsundials-sunlinsol3{a} libsundials-sunmatrix4{a} libsuperlu-dist8{a} libsuperlu5{a} libsvtav1enc1{a} libsyntax-keyword-try-perl{a} libsz2{a} libterm-readkey-perl{a} libtest-exception-perl{a} libtext-autoformat-perl{a} libtext-levenshtein-damerau-perl{a} libtext-levenshteinxs-perl{a} libtext-markdown-discount-perl{a} libtext-reform-perl{a} libtext-template-perl{a} libtext-unidecode-perl{a} libtext-xslate-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtime-duration-perl{a} libtime-moment-perl{a} libtimedate-perl{a} libtoml-tiny-perl{a} libtool{a} libtrilinos-amesos-13.2{a} libtrilinos-aztecoo-13.2{a} libtrilinos-epetra-13.2{a} libtrilinos-epetraext-13.2{a} libtrilinos-galeri-13.2{a} libtrilinos-ifpack-13.2{a} libtrilinos-kokkos-13.2{a} libtrilinos-ml-13.2{a} libtrilinos-teuchos-13.2{a} libtrilinos-trilinosss-13.2{a} libtrilinos-triutils-13.2{a} libtrilinos-zoltan-13.2{a} libtry-tiny-perl{a} libuchardet0{a} libucx0{a} libumfpack5{a} libunicode-utf8-perl{a} liburi-perl{a} libvariable-magic-perl{a} libvorbis0a{a} libvorbisenc2{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpmux3{a} libwmflite-0.2-7{a} libwww-mechanize-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libx265-199{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcursor1{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxft2{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml2{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxs-parse-keyword-perl{a} libxs-parse-sublike-perl{a} libxshmfence1{a} libxxf86vm1{a} libyaml-0-2{a} libyaml-libyaml-perl{a} libyaml-pp-perl{a} libyaml-tiny-perl{a} libyuv0{a} libz3-4{a} licensecheck{a} lintian{a} lzop{a} m4{a} man-db{a} mpi-default-bin{a} netbase{a} ocl-icd-libopencl1{a} octave{a} octave-common{a} octave-dev{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} patchutils{a} perl-openssl-defaults{a} plzip{a} po-debconf{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} texinfo{a} ucf{a} unzip{a} x11-common{a} x11proto-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: alsa-topology-conf alsa-ucm-conf bash-completion curl dbus default-jre-headless epstool fonts-liberation fonts-urw-base35 ghostscript gnupg groff libarchive-cpio-perl libatlas3-base libauthen-sasl-perl libcgi-fast-perl libclass-c3-xs-perl libconfig-model-approx-perl libconfig-model-lcdproc-perl libconfig-model-openssh-perl libconfig-model-systemd-perl libconfig-model-tkui-perl libdata-dump-perl libfreezethaw-perl libfuse-perl libglib2.0-data libgpm2 libhtml-format-perl libhttp-daemon-perl libipc-shareable-perl libjson-xs-perl libldap-common liblist-someutils-xs-perl liblog-dispatch-perl libltdl-dev libmail-sendmail-perl libmath-base85-perl libopenblas0 libpackage-stash-xs-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 libre-engine-re2-perl libsasl2-modules libsocket6-perl libtie-ixhash-perl libtypes-serialiser-perl libxml-sax-expat-perl libxstring-perl lynx octave-doc pstoedit publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xauth xdg-user-dirs 0 packages upgraded, 526 newly installed, 0 to remove and 0 not upgraded. Need to get 206 MB of archives. After unpacking 811 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.8-1 [1407 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 libcbor0.8 amd64 0.8.0-2+b1 [27.4 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 libfido2-1 amd64 1.12.0-2+b1 [77.2 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 openssh-client amd64 1:9.2p1-2 [988 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libio-stringy-perl all 2.111-3 [56.5 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libparams-validate-perl amd64 1.31-1 [64.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libgetopt-long-descriptive-perl all 0.111-1 [27.8 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 libio-tiecombine-perl all 1.005-3 [10.8 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 libmodule-pluggable-perl all 5.2-4 [23.6 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libstring-rewriteprefix-perl all 0.009-1 [7140 B] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libapp-cmd-perl all 0.335-1 [65.3 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 libboolean-perl all 0.46-3 [9924 B] Get: 49 http://deb.debian.org/debian bookworm/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libcarp-assert-more-perl all 2.2.0-1 [18.8 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 libclone-choose-perl all 0.010-2 [8676 B] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libhash-merge-perl all 0.302-1 [14.7 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libexporter-tiny-perl all 1.006000-1 [38.6 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-xs-perl amd64 0.430-3+b1 [42.1 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 liblog-log4perl-perl all 1.57-1 [367 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 libmousex-nativetraits-perl all 1.09-3 [53.5 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libmousex-strictconstructor-perl all 0.02-3 [5304 B] Get: 64 http://deb.debian.org/debian bookworm/main amd64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 libpod-pom-perl all 2.01-4 [65.0 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 libregexp-common-perl all 2017060201-3 [175 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 libyaml-tiny-perl all 1.73-1 [32.3 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 libconfig-model-perl all 2.152-1 [472 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libyaml-pp-perl all 0.035-1 [112 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 cme all 1.038-1 [86.9 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libsuitesparseconfig5 amd64 1:5.12.0+dfsg-2 [23.9 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libamd2 amd64 1:5.12.0+dfsg-2 [36.2 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libarpack2 amd64 3.8.0-3 [102 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libccolamd2 amd64 1:5.12.0+dfsg-2 [39.7 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libcamd2 amd64 1:5.12.0+dfsg-2 [37.8 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libcolamd2 amd64 1:5.12.0+dfsg-2 [32.9 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libmetis5 amd64 5.1.0.dfsg-7 [171 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libcholmod3 amd64 1:5.12.0+dfsg-2 [335 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-9 [381 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libcxsparse3 amd64 1:5.12.0+dfsg-2 [80.7 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libfftw3-double3 amd64 3.3.10-1 [776 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 libfftw3-single3 amd64 3.3.10-1 [806 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 fonts-freefont-otf all 20120503-10 [3171 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libxcursor1 amd64 1:1.2.1-1 [40.9 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libxinerama1 amd64 2:1.1.4-3 [17.8 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libfltk1.3 amd64 1.3.8-5 [569 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libglvnd0 amd64 1.6.0-1 [51.8 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 libdrm-common all 2.4.114-1 [7112 B] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libdrm2 amd64 2.4.114-1+b1 [37.5 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libglapi-mesa amd64 22.3.6-1+deb12u1 [35.7 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 libx11-xcb1 amd64 2:1.8.4-2 [192 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get: 139 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 143 http://deb.debian.org/debian bookworm/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 libdrm-amdgpu1 amd64 2.4.114-1+b1 [20.9 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libdrm-intel1 amd64 2.4.114-1+b1 [64.0 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libdrm-nouveau2 amd64 2.4.114-1+b1 [19.1 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libdrm-radeon1 amd64 2.4.114-1+b1 [21.8 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libllvm15 amd64 1:15.0.6-4+b1 [23.1 MB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libsensors-config all 1:3.6.0-7.1 [14.3 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 libsensors5 amd64 1:3.6.0-7.1 [34.2 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dri amd64 22.3.6-1+deb12u1 [7239 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 libglx-mesa0 amd64 22.3.6-1+deb12u1 [147 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libglx0 amd64 1.6.0-1 [34.4 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libgl1 amd64 1.6.0-1 [88.4 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 libfltk-gl1.3 amd64 1.3.8-5 [79.1 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2 [41.3 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libltdl7 amd64 2.4.7-5 [393 kB] Get: 160 http://deb.debian.org/debian bookworm/main amd64 libglpk40 amd64 5.0-1 [400 kB] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libopengl0 amd64 1.6.0-1 [30.6 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa amd64 9.0.2-1.1 [178 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libaom3 amd64 3.6.0-1 [1851 kB] Get: 164 http://deb.debian.org/debian bookworm/main amd64 libdav1d6 amd64 1.0.0-2 [495 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 libde265-0 amd64 1.0.11-1 [185 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get: 167 http://deb.debian.org/debian bookworm/main amd64 libx265-199 amd64 3.5-2+b1 [1150 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 libheif1 amd64 1.15.1-1 [215 kB] Get: 169 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 170 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 libhwy1 amd64 1.0.3-3 [348 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get: 173 http://deb.debian.org/debian bookworm/main amd64 libjxl0.7 amd64 0.7.0-10 [1046 kB] Get: 174 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.1 [285 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-5 [316 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.1 [109 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 libwmflite-0.2-7 amd64 0.2.12-5 [80.7 kB] Get: 180 http://deb.debian.org/debian bookworm/main amd64 libgraphicsmagick-q16-3 amd64 1.4+really1.3.40-4 [1180 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 libgraphicsmagick++-q16-12 amd64 1.4+really1.3.40-4 [115 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-9 [386 kB] Get: 183 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 184 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 185 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 186 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get: 187 http://deb.debian.org/debian bookworm/main amd64 libasound2-data all 1.2.8-1 [20.5 kB] Get: 188 http://deb.debian.org/debian bookworm/main amd64 libasound2 amd64 1.2.8-1+b1 [362 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 libopus0 amd64 1.3.1-3 [195 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 libsamplerate0 amd64 0.2.2-3 [952 kB] Get: 191 http://deb.debian.org/debian bookworm/main amd64 libjack-jackd2-0 amd64 1.9.21~dfsg-3 [281 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 libportaudio2 amd64 19.6.0-1.2 [66.7 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get: 194 http://deb.debian.org/debian bookworm/main amd64 libqrupdate1 amd64 1.1.2-4 [37.8 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 libqscintilla2-qt5-l10n all 2.13.3+dfsg-3 [103 kB] Get: 196 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 197 http://deb.debian.org/debian bookworm/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 libqt5core5a amd64 5.15.8+dfsg-7 [1809 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 libwayland-server0 amd64 1.21.0-1 [35.9 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 libgbm1 amd64 22.3.6-1+deb12u1 [38.0 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 libwayland-client0 amd64 1.21.0-1 [28.3 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 libegl-mesa0 amd64 22.3.6-1+deb12u1 [114 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 libegl1 amd64 1.6.0-1 [33.7 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 libevdev2 amd64 1.13.0+dfsg-1 [34.0 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 libgudev-1.0-0 amd64 237-2 [15.1 kB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 libwacom-common all 2.6.0-1 [58.4 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 libwacom9 amd64 2.6.0-1 [21.5 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 libinput-bin amd64 1.22.1-1 [23.2 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 libinput10 amd64 1.22.1-1 [125 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 libmd4c0 amd64 0.4.8-1 [44.2 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 libdbus-1-3 amd64 1.14.6-1 [200 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 libqt5dbus5 amd64 5.15.8+dfsg-7 [211 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 libqt5network5 amd64 5.15.8+dfsg-7 [674 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 libxcb-image0 amd64 0.4.0-2 [22.9 kB] Get: 226 http://deb.debian.org/debian bookworm/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get: 227 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get: 228 http://deb.debian.org/debian bookworm/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get: 229 http://deb.debian.org/debian bookworm/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get: 230 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get: 231 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get: 232 http://deb.debian.org/debian bookworm/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get: 233 http://deb.debian.org/debian bookworm/main amd64 xkb-data all 2.35.1-1 [764 kB] Get: 234 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon0 amd64 1.5.0-1 [106 kB] Get: 235 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon-x11-0 amd64 1.5.0-1 [15.6 kB] Get: 236 http://deb.debian.org/debian bookworm/main amd64 libqt5gui5 amd64 5.15.8+dfsg-7 [3407 kB] Get: 237 http://deb.debian.org/debian bookworm/main amd64 libavahi-common-data amd64 0.8-10 [107 kB] Get: 238 http://deb.debian.org/debian bookworm/main amd64 libavahi-common3 amd64 0.8-10 [41.6 kB] Get: 239 http://deb.debian.org/debian bookworm/main amd64 libavahi-client3 amd64 0.8-10 [45.5 kB] Get: 240 http://deb.debian.org/debian bookworm/main amd64 libcups2 amd64 2.4.2-3 [244 kB] Get: 241 http://deb.debian.org/debian bookworm/main amd64 libqt5widgets5 amd64 5.15.8+dfsg-7 [2379 kB] Get: 242 http://deb.debian.org/debian bookworm/main amd64 libqt5printsupport5 amd64 5.15.8+dfsg-7 [202 kB] Get: 243 http://deb.debian.org/debian bookworm/main amd64 libqscintilla2-qt5-15 amd64 2.13.3+dfsg-3 [1094 kB] Get: 244 http://deb.debian.org/debian bookworm/main amd64 libqt5sql5 amd64 5.15.8+dfsg-7 [121 kB] Get: 245 http://deb.debian.org/debian bookworm/main amd64 libqt5help5 amd64 5.15.8-2 [149 kB] Get: 246 http://deb.debian.org/debian bookworm/main amd64 libqt5xml5 amd64 5.15.8+dfsg-7 [121 kB] Get: 247 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 248 http://deb.debian.org/debian bookworm/main amd64 libogg0 amd64 1.3.5-3 [23.4 kB] Get: 249 http://deb.debian.org/debian bookworm/main amd64 libflac12 amd64 1.4.2+ds-2 [198 kB] Get: 250 http://deb.debian.org/debian bookworm/main amd64 libmp3lame0 amd64 3.100-6 [365 kB] Get: 251 http://deb.debian.org/debian bookworm/main amd64 libmpg123-0 amd64 1.31.2-1 [147 kB] Get: 252 http://deb.debian.org/debian bookworm/main amd64 libvorbis0a amd64 1.3.7-1 [93.0 kB] Get: 253 http://deb.debian.org/debian bookworm/main amd64 libvorbisenc2 amd64 1.3.7-1 [80.6 kB] Get: 254 http://deb.debian.org/debian bookworm/main amd64 libsndfile1 amd64 1.2.0-1 [196 kB] Get: 255 http://deb.debian.org/debian bookworm/main amd64 libspqr2 amd64 1:5.12.0+dfsg-2 [82.2 kB] Get: 256 http://deb.debian.org/debian bookworm/main amd64 libsundials-ida6 amd64 6.4.1+dfsg1-3 [145 kB] Get: 257 http://deb.debian.org/debian bookworm/main amd64 libbtf1 amd64 1:5.12.0+dfsg-2 [25.6 kB] Get: 258 http://deb.debian.org/debian bookworm/main amd64 libklu1 amd64 1:5.12.0+dfsg-2 [87.9 kB] Get: 259 http://deb.debian.org/debian bookworm/main amd64 libfftw3-long3 amd64 3.3.10-1 [337 kB] Get: 260 http://deb.debian.org/debian bookworm/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-8 [131 kB] Get: 261 http://deb.debian.org/debian bookworm/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-8 [53.6 kB] Get: 262 http://deb.debian.org/debian bookworm/main amd64 libnl-3-200 amd64 3.7.0-0.2+b1 [63.1 kB] Get: 263 http://deb.debian.org/debian bookworm/main amd64 libnl-route-3-200 amd64 3.7.0-0.2+b1 [185 kB] Get: 264 http://deb.debian.org/debian bookworm/main amd64 libibverbs1 amd64 44.0-2 [60.7 kB] Get: 265 http://deb.debian.org/debian bookworm/main amd64 ibverbs-providers amd64 44.0-2 [335 kB] Get: 266 http://deb.debian.org/debian bookworm/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.2 [168 kB] Get: 267 http://deb.debian.org/debian bookworm/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 268 http://deb.debian.org/debian bookworm/main amd64 librdmacm1 amd64 44.0-2 [68.6 kB] Get: 269 http://deb.debian.org/debian bookworm/main amd64 libfabric1 amd64 1.17.0-3 [627 kB] Get: 270 http://deb.debian.org/debian bookworm/main amd64 libhwloc15 amd64 2.9.0-1 [154 kB] Get: 271 http://deb.debian.org/debian bookworm/main amd64 libmunge2 amd64 0.5.15-2 [19.5 kB] Get: 272 http://deb.debian.org/debian bookworm/main amd64 libxnvctrl0 amd64 525.85.05-1 [13.3 kB] Get: 273 http://deb.debian.org/debian bookworm/main amd64 ocl-icd-libopencl1 amd64 2.3.1-1 [43.0 kB] Get: 274 http://deb.debian.org/debian bookworm/main amd64 libhwloc-plugins amd64 2.9.0-1 [17.5 kB] Get: 275 http://deb.debian.org/debian bookworm/main amd64 libpmix2 amd64 4.2.2-1+b1 [622 kB] Get: 276 http://deb.debian.org/debian bookworm/main amd64 libucx0 amd64 1.13.1-1 [860 kB] Get: 277 http://deb.debian.org/debian bookworm/main amd64 libopenmpi3 amd64 4.1.4-3+b1 [2422 kB] Get: 278 http://deb.debian.org/debian bookworm/main amd64 libfftw3-mpi3 amd64 3.3.10-1 [62.0 kB] Get: 279 http://deb.debian.org/debian bookworm/main amd64 libhdf5-openmpi-103-1 amd64 1.10.8+repack1-1 [1279 kB] Get: 280 http://deb.debian.org/debian bookworm/main amd64 libcombblas1.16.0 amd64 1.6.2-8 [284 kB] Get: 281 http://deb.debian.org/debian bookworm/main amd64 libptscotch-7.0 amd64 7.0.3-1 [668 kB] Get: 282 http://deb.debian.org/debian bookworm/main amd64 libsuperlu-dist8 amd64 8.1.2+dfsg1-1+b1 [595 kB] Get: 283 http://deb.debian.org/debian bookworm/main amd64 libhypre-2.26.0 amd64 2.26.0-3 [1603 kB] Get: 284 http://deb.debian.org/debian bookworm/main amd64 openmpi-common all 4.1.4-3 [167 kB] Get: 285 http://deb.debian.org/debian bookworm/main amd64 openmpi-bin amd64 4.1.4-3+b1 [226 kB] Get: 286 http://deb.debian.org/debian bookworm/main amd64 mpi-default-bin amd64 1.14 [4752 B] Get: 287 http://deb.debian.org/debian bookworm/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-2+b1 [1554 kB] Get: 288 http://deb.debian.org/debian bookworm/main amd64 libmumps-5.5 amd64 5.5.1-1 [1828 kB] Get: 289 http://deb.debian.org/debian bookworm/main amd64 libsuperlu5 amd64 5.3.0+dfsg1-2+b1 [170 kB] Get: 290 http://deb.debian.org/debian bookworm/main amd64 libscotch-7.0 amd64 7.0.3-1 [407 kB] Get: 291 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-kokkos-13.2 amd64 13.2.0-4 [105 kB] Get: 292 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-teuchos-13.2 amd64 13.2.0-4 [1257 kB] Get: 293 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-epetra-13.2 amd64 13.2.0-4 [441 kB] Get: 294 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-triutils-13.2 amd64 13.2.0-4 [124 kB] Get: 295 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-epetraext-13.2 amd64 13.2.0-4 [443 kB] Get: 296 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-trilinosss-13.2 amd64 13.2.0-4 [88.1 kB] Get: 297 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-amesos-13.2 amd64 13.2.0-4 [117 kB] Get: 298 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-aztecoo-13.2 amd64 13.2.0-4 [210 kB] Get: 299 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-galeri-13.2 amd64 13.2.0-4 [93.5 kB] Get: 300 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-ifpack-13.2 amd64 13.2.0-4 [486 kB] Get: 301 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-zoltan-13.2 amd64 13.2.0-4 [384 kB] Get: 302 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-ml-13.2 amd64 13.2.0-4 [988 kB] Get: 303 http://deb.debian.org/debian bookworm/main amd64 libumfpack5 amd64 1:5.12.0+dfsg-2 [245 kB] Get: 304 http://deb.debian.org/debian bookworm/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get: 305 http://deb.debian.org/debian bookworm/main amd64 libpetsc-real3.18 amd64 3.18.5+dfsg1-1 [6699 kB] Get: 306 http://deb.debian.org/debian bookworm/main amd64 libsundials-nvecparallel-petsc6 amd64 6.4.1+dfsg1-3 [58.3 kB] Get: 307 http://deb.debian.org/debian bookworm/main amd64 libsundials-sunmatrix4 amd64 6.4.1+dfsg1-3 [103 kB] Get: 308 http://deb.debian.org/debian bookworm/main amd64 libsundials-sunlinsol3 amd64 6.4.1+dfsg1-3 [201 kB] Get: 309 http://deb.debian.org/debian bookworm/main amd64 libtext-unidecode-perl all 1.30-3 [101 kB] Get: 310 http://deb.debian.org/debian bookworm/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 311 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 312 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get: 313 http://deb.debian.org/debian bookworm/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get: 314 http://deb.debian.org/debian bookworm/main amd64 tex-common all 6.18 [32.5 kB] Get: 315 http://deb.debian.org/debian bookworm/main amd64 texinfo amd64 6.8-6+b1 [1816 kB] Get: 316 http://deb.debian.org/debian bookworm/main amd64 octave-common all 7.3.0-2 [6257 kB] Get: 317 http://deb.debian.org/debian bookworm/main amd64 octave amd64 7.3.0-2 [10.2 MB] Get: 318 http://deb.debian.org/debian bookworm/main amd64 libncurses6 amd64 6.4-4 [103 kB] Get: 319 http://deb.debian.org/debian bookworm/main amd64 libncurses-dev amd64 6.4-4 [349 kB] Get: 320 http://deb.debian.org/debian bookworm/main amd64 libreadline-dev amd64 8.2-1.3 [151 kB] Get: 321 http://deb.debian.org/debian bookworm/main amd64 libhdf5-fortran-102 amd64 1.10.8+repack1-1 [93.3 kB] Get: 322 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 323 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-fortran-100 amd64 1.10.8+repack1-1 [44.5 kB] Get: 324 http://deb.debian.org/debian bookworm/main amd64 libhdf5-cpp-103-1 amd64 1.10.8+repack1-1 [128 kB] Get: 325 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-cpp-100 amd64 1.10.8+repack1-1 [25.5 kB] Get: 326 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 327 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get: 328 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get: 329 http://deb.debian.org/debian bookworm/main amd64 libaec-dev amd64 1.0.6-1+b1 [19.9 kB] Get: 330 http://deb.debian.org/debian bookworm/main amd64 libcurl4-openssl-dev amd64 7.88.1-9 [487 kB] Get: 331 http://deb.debian.org/debian bookworm/main amd64 libssl-dev amd64 3.0.8-1 [2427 kB] Get: 332 http://deb.debian.org/debian bookworm/main amd64 hdf5-helpers amd64 1.10.8+repack1-1 [27.9 kB] Get: 333 http://deb.debian.org/debian bookworm/main amd64 libhdf5-dev amd64 1.10.8+repack1-1 [2615 kB] Get: 334 http://deb.debian.org/debian bookworm/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 335 http://deb.debian.org/debian bookworm/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get: 336 http://deb.debian.org/debian bookworm/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get: 337 http://deb.debian.org/debian bookworm/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get: 338 http://deb.debian.org/debian bookworm/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 339 http://deb.debian.org/debian bookworm/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get: 340 http://deb.debian.org/debian bookworm/main amd64 libxcb1-dev amd64 1.15-1 [181 kB] Get: 341 http://deb.debian.org/debian bookworm/main amd64 libx11-dev amd64 2:1.8.4-2 [836 kB] Get: 342 http://deb.debian.org/debian bookworm/main amd64 libglx-dev amd64 1.6.0-1 [15.3 kB] Get: 343 http://deb.debian.org/debian bookworm/main amd64 libgl-dev amd64 1.6.0-1 [100 kB] Get: 344 http://deb.debian.org/debian bookworm/main amd64 libglvnd-core-dev amd64 1.6.0-1 [12.9 kB] Get: 345 http://deb.debian.org/debian bookworm/main amd64 libegl-dev amd64 1.6.0-1 [19.1 kB] Get: 346 http://deb.debian.org/debian bookworm/main amd64 libgles1 amd64 1.6.0-1 [11.7 kB] Get: 347 http://deb.debian.org/debian bookworm/main amd64 libgles2 amd64 1.6.0-1 [16.8 kB] Get: 348 http://deb.debian.org/debian bookworm/main amd64 libgles-dev amd64 1.6.0-1 [50.4 kB] Get: 349 http://deb.debian.org/debian bookworm/main amd64 libopengl-dev amd64 1.6.0-1 [4936 B] Get: 350 http://deb.debian.org/debian bookworm/main amd64 libglvnd-dev amd64 1.6.0-1 [4692 B] Get: 351 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dev amd64 22.3.6-1+deb12u1 [14.5 kB] Get: 352 http://deb.debian.org/debian bookworm/main amd64 libblas-dev amd64 3.11.0-2 [158 kB] Get: 353 http://deb.debian.org/debian bookworm/main amd64 liblapack-dev amd64 3.11.0-2 [4631 kB] Get: 354 http://deb.debian.org/debian bookworm/main amd64 libfftw3-quad3 amd64 3.3.10-1 [603 kB] Get: 355 http://deb.debian.org/debian bookworm/main amd64 libfftw3-bin amd64 3.3.10-1 [51.7 kB] Get: 356 http://deb.debian.org/debian bookworm/main amd64 libfftw3-dev amd64 3.3.10-1 [2123 kB] Get: 357 http://deb.debian.org/debian bookworm/main amd64 libgfortran-12-dev amd64 12.2.0-14 [834 kB] Get: 358 http://deb.debian.org/debian bookworm/main amd64 gfortran-12 amd64 12.2.0-14 [10.2 MB] Get: 359 http://deb.debian.org/debian bookworm/main amd64 gfortran amd64 4:12.2.0-3 [1428 B] Get: 360 http://deb.debian.org/debian bookworm/main amd64 octave-dev amd64 7.3.0-2 [895 kB] Get: 361 http://deb.debian.org/debian bookworm/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get: 362 http://deb.debian.org/debian bookworm/main amd64 libarray-intspan-perl all 2.004-2 [25.7 kB] Get: 363 http://deb.debian.org/debian bookworm/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get: 364 http://deb.debian.org/debian bookworm/main amd64 libconfig-model-backend-yaml-perl all 2.134-2 [10.8 kB] Get: 365 http://deb.debian.org/debian bookworm/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get: 366 http://deb.debian.org/debian bookworm/main amd64 libdata-compare-perl all 1.27-3 [19.4 kB] Get: 367 http://deb.debian.org/debian bookworm/main amd64 libexporter-lite-perl all 0.09-2 [10.7 kB] Get: 368 http://deb.debian.org/debian bookworm/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 369 http://deb.debian.org/debian bookworm/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 370 http://deb.debian.org/debian bookworm/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get: 371 http://deb.debian.org/debian bookworm/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get: 372 http://deb.debian.org/debian bookworm/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get: 373 http://deb.debian.org/debian bookworm/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get: 374 http://deb.debian.org/debian bookworm/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get: 375 http://deb.debian.org/debian bookworm/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get: 376 http://deb.debian.org/debian bookworm/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 377 http://deb.debian.org/debian bookworm/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 378 http://deb.debian.org/debian bookworm/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 379 http://deb.debian.org/debian bookworm/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get: 380 http://deb.debian.org/debian bookworm/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get: 381 http://deb.debian.org/debian bookworm/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 382 http://deb.debian.org/debian bookworm/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get: 383 http://deb.debian.org/debian bookworm/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get: 384 http://deb.debian.org/debian bookworm/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get: 385 http://deb.debian.org/debian bookworm/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get: 386 http://deb.debian.org/debian bookworm/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get: 387 http://deb.debian.org/debian bookworm/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 388 http://deb.debian.org/debian bookworm/main amd64 libwww-perl all 6.68-1 [186 kB] Get: 389 http://deb.debian.org/debian bookworm/main amd64 liberror-perl all 0.17029-2 [29.0 kB] Get: 390 http://deb.debian.org/debian bookworm/main amd64 libparse-debcontrol-perl all 2.005-6 [21.6 kB] Get: 391 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get: 392 http://deb.debian.org/debian bookworm/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get: 393 http://deb.debian.org/debian bookworm/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get: 394 http://deb.debian.org/debian bookworm/main amd64 libdata-section-perl all 0.200008-1 [13.1 kB] Get: 395 http://deb.debian.org/debian bookworm/main amd64 libtext-template-perl all 1.61-1 [54.4 kB] Get: 396 http://deb.debian.org/debian bookworm/main amd64 libsoftware-license-perl all 0.104002-1 [118 kB] Get: 397 http://deb.debian.org/debian bookworm/main amd64 libsoftware-licensemoreutils-perl all 1.009-1 [22.0 kB] Get: 398 http://deb.debian.org/debian bookworm/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get: 399 http://deb.debian.org/debian bookworm/main amd64 libtext-reform-perl all 1.20-5 [36.0 kB] Get: 400 http://deb.debian.org/debian bookworm/main amd64 libtext-autoformat-perl all 1.750000-2 [35.2 kB] Get: 401 http://deb.debian.org/debian bookworm/main amd64 libtext-levenshtein-damerau-perl all 0.41-3 [12.3 kB] Get: 402 http://deb.debian.org/debian bookworm/main amd64 libtoml-tiny-perl all 0.15-1 [23.2 kB] Get: 403 http://deb.debian.org/debian bookworm/main amd64 libindirect-perl amd64 0.39-2+b1 [27.1 kB] Get: 404 http://deb.debian.org/debian bookworm/main amd64 libxs-parse-keyword-perl amd64 0.33-1 [58.4 kB] Get: 405 http://deb.debian.org/debian bookworm/main amd64 libxs-parse-sublike-perl amd64 0.16-1+b2 [28.5 kB] Get: 406 http://deb.debian.org/debian bookworm/main amd64 libobject-pad-perl amd64 0.78-1 [116 kB] Get: 407 http://deb.debian.org/debian bookworm/main amd64 libfeature-compat-class-perl all 0.05-1 [11.0 kB] Get: 408 http://deb.debian.org/debian bookworm/main amd64 libsyntax-keyword-try-perl amd64 0.28-1 [28.6 kB] Get: 409 http://deb.debian.org/debian bookworm/main amd64 libfeature-compat-try-perl all 0.05-1 [10.4 kB] Get: 410 http://deb.debian.org/debian bookworm/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get: 411 http://deb.debian.org/debian bookworm/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get: 412 http://deb.debian.org/debian bookworm/main amd64 liblog-any-perl all 1.713-1 [76.3 kB] Get: 413 http://deb.debian.org/debian bookworm/main amd64 liblog-any-adapter-screen-perl all 0.140-2 [13.3 kB] Get: 414 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get: 415 http://deb.debian.org/debian bookworm/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get: 416 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get: 417 http://deb.debian.org/debian bookworm/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get: 418 http://deb.debian.org/debian bookworm/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get: 419 http://deb.debian.org/debian bookworm/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get: 420 http://deb.debian.org/debian bookworm/main amd64 libpath-iterator-rule-perl all 1.015-2 [41.7 kB] Get: 421 http://deb.debian.org/debian bookworm/main amd64 libpod-parser-perl all 1.65-1 [96.3 kB] Get: 422 http://deb.debian.org/debian bookworm/main amd64 libpod-constants-perl all 0.19-2 [17.3 kB] Get: 423 http://deb.debian.org/debian bookworm/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get: 424 http://deb.debian.org/debian bookworm/main amd64 libset-intspan-perl all 1.19-3 [25.3 kB] Get: 425 http://deb.debian.org/debian bookworm/main amd64 libstring-copyright-perl all 0.003014-1 [23.4 kB] Get: 426 http://deb.debian.org/debian bookworm/main amd64 libstring-escape-perl all 2010.002-3 [18.7 kB] Get: 427 http://deb.debian.org/debian bookworm/main amd64 libregexp-pattern-license-perl all 3.9.4-3 [93.3 kB] Get: 428 http://deb.debian.org/debian bookworm/main amd64 libregexp-pattern-perl all 0.2.14-2 [18.7 kB] Get: 429 http://deb.debian.org/debian bookworm/main amd64 libstring-license-perl all 0.0.2-1 [34.3 kB] Get: 430 http://deb.debian.org/debian bookworm/main amd64 licensecheck all 3.3.5-1 [49.8 kB] Get: 431 http://deb.debian.org/debian bookworm/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get: 432 http://deb.debian.org/debian bookworm/main amd64 libassuan0 amd64 2.5.5-5 [48.5 kB] Get: 433 http://deb.debian.org/debian bookworm/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get: 434 http://deb.debian.org/debian bookworm/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get: 435 http://deb.debian.org/debian bookworm/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get: 436 http://deb.debian.org/debian bookworm/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get: 437 http://deb.debian.org/debian bookworm/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get: 438 http://deb.debian.org/debian bookworm/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get: 439 http://deb.debian.org/debian bookworm/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get: 440 http://deb.debian.org/debian bookworm/main amd64 libcpanel-json-xs-perl amd64 4.35-1 [131 kB] Get: 441 http://deb.debian.org/debian bookworm/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get: 442 http://deb.debian.org/debian bookworm/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 443 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get: 444 http://deb.debian.org/debian bookworm/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get: 445 http://deb.debian.org/debian bookworm/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get: 446 http://deb.debian.org/debian bookworm/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get: 447 http://deb.debian.org/debian bookworm/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get: 448 http://deb.debian.org/debian bookworm/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get: 449 http://deb.debian.org/debian bookworm/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get: 450 http://deb.debian.org/debian bookworm/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get: 451 http://deb.debian.org/debian bookworm/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get: 452 http://deb.debian.org/debian bookworm/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get: 453 http://deb.debian.org/debian bookworm/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get: 454 http://deb.debian.org/debian bookworm/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get: 455 http://deb.debian.org/debian bookworm/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get: 456 http://deb.debian.org/debian bookworm/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get: 457 http://deb.debian.org/debian bookworm/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get: 458 http://deb.debian.org/debian bookworm/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get: 459 http://deb.debian.org/debian bookworm/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 460 http://deb.debian.org/debian bookworm/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get: 461 http://deb.debian.org/debian bookworm/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get: 462 http://deb.debian.org/debian bookworm/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get: 463 http://deb.debian.org/debian bookworm/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get: 464 http://deb.debian.org/debian bookworm/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get: 465 http://deb.debian.org/debian bookworm/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get: 466 http://deb.debian.org/debian bookworm/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get: 467 http://deb.debian.org/debian bookworm/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get: 468 http://deb.debian.org/debian bookworm/main amd64 libclass-method-modifiers-perl all 2.14-1 [18.1 kB] Get: 469 http://deb.debian.org/debian bookworm/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get: 470 http://deb.debian.org/debian bookworm/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 471 http://deb.debian.org/debian bookworm/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get: 472 http://deb.debian.org/debian bookworm/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get: 473 http://deb.debian.org/debian bookworm/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get: 474 http://deb.debian.org/debian bookworm/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get: 475 http://deb.debian.org/debian bookworm/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get: 476 http://deb.debian.org/debian bookworm/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get: 477 http://deb.debian.org/debian bookworm/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get: 478 http://deb.debian.org/debian bookworm/main amd64 libsereal-decoder-perl amd64 5.003+ds-1 [99.5 kB] Get: 479 http://deb.debian.org/debian bookworm/main amd64 libsereal-encoder-perl amd64 5.003+ds-1 [102 kB] Get: 480 http://deb.debian.org/debian bookworm/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get: 481 http://deb.debian.org/debian bookworm/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get: 482 http://deb.debian.org/debian bookworm/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get: 483 http://deb.debian.org/debian bookworm/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get: 484 http://deb.debian.org/debian bookworm/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get: 485 http://deb.debian.org/debian bookworm/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get: 486 http://deb.debian.org/debian bookworm/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get: 487 http://deb.debian.org/debian bookworm/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get: 488 http://deb.debian.org/debian bookworm/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get: 489 http://deb.debian.org/debian bookworm/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get: 490 http://deb.debian.org/debian bookworm/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get: 491 http://deb.debian.org/debian bookworm/main amd64 libwww-mechanize-perl all 2.16-1 [116 kB] Get: 492 http://deb.debian.org/debian bookworm/main amd64 liblz1 amd64 1.13-5 [37.7 kB] Get: 493 http://deb.debian.org/debian bookworm/main amd64 plzip amd64 1.10-5 [61.9 kB] Get: 494 http://deb.debian.org/debian bookworm/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get: 495 http://deb.debian.org/debian bookworm/main amd64 lzop amd64 1.04-2 [84.2 kB] Get: 496 http://deb.debian.org/debian bookworm/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get: 497 http://deb.debian.org/debian bookworm/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get: 498 http://deb.debian.org/debian bookworm/main amd64 unzip amd64 6.0-28 [166 kB] Get: 499 http://deb.debian.org/debian bookworm/main amd64 lintian all 2.116.3 [1130 kB] Get: 500 http://deb.debian.org/debian bookworm/main amd64 libconfig-model-dpkg-perl all 2.165 [206 kB] Get: 501 http://deb.debian.org/debian bookworm/main amd64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Get: 502 http://deb.debian.org/debian bookworm/main amd64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Get: 503 http://deb.debian.org/debian bookworm/main amd64 libmailtools-perl all 2.21-2 [95.6 kB] Get: 504 http://deb.debian.org/debian bookworm/main amd64 libmime-tools-perl all 5.510-1 [213 kB] Get: 505 http://deb.debian.org/debian bookworm/main amd64 gnuplot-data all 5.4.4+dfsg1-2 [72.1 kB] Get: 506 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get: 507 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get: 508 http://deb.debian.org/debian bookworm/main amd64 libabsl20220623 amd64 20220623.1-1 [391 kB] Get: 509 http://deb.debian.org/debian bookworm/main amd64 libgav1-1 amd64 0.18.0-1+b1 [332 kB] Get: 510 http://deb.debian.org/debian bookworm/main amd64 librav1e0 amd64 0.5.1-6 [763 kB] Get: 511 http://deb.debian.org/debian bookworm/main amd64 libsvtav1enc1 amd64 1.4.1+dfsg-1 [2121 kB] Get: 512 http://deb.debian.org/debian bookworm/main amd64 libyuv0 amd64 0.0~git20230123.b2528b0-1 [168 kB] Get: 513 http://deb.debian.org/debian bookworm/main amd64 libavif15 amd64 0.11.1-1 [93.8 kB] Get: 514 http://deb.debian.org/debian bookworm/main amd64 libxpm4 amd64 1:3.5.12-1.1 [48.4 kB] Get: 515 http://deb.debian.org/debian bookworm/main amd64 libgd3 amd64 2.3.3-9 [124 kB] Get: 516 http://deb.debian.org/debian bookworm/main amd64 liblua5.4-0 amd64 5.4.4-3 [137 kB] Get: 517 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get: 518 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get: 519 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get: 520 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get: 521 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get: 522 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get: 523 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get: 524 http://deb.debian.org/debian bookworm/main amd64 gnuplot-nox amd64 5.4.4+dfsg1-2+b2 [848 kB] Get: 525 http://deb.debian.org/debian bookworm/main amd64 dh-octave-autopkgtest all 1.2.7 [9364 B] Get: 526 http://deb.debian.org/debian bookworm/main amd64 dh-octave all 1.2.7 [22.8 kB] Fetched 206 MB in 3s (72.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_3.0.8-1_amd64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../006-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../009-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../012-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../014-libbsd0_0.11.7-2_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../015-libedit2_3.1-20221030-2_amd64.deb ... Unpacking libedit2:amd64 (3.1-20221030-2) ... Selecting previously unselected package libcbor0.8:amd64. Preparing to unpack .../016-libcbor0.8_0.8.0-2+b1_amd64.deb ... Unpacking libcbor0.8:amd64 (0.8.0-2+b1) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../017-libfido2-1_1.12.0-2+b1_amd64.deb ... Unpacking libfido2-1:amd64 (1.12.0-2+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../018-openssh-client_1%3a9.2p1-2_amd64.deb ... Unpacking openssh-client (1:9.2p1-2) ... Selecting previously unselected package ucf. Preparing to unpack .../019-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package aglfn. Preparing to unpack .../020-aglfn_1.7+git20191031.4036a9c-2_all.deb ... Unpacking aglfn (1.7+git20191031.4036a9c-2) ... Selecting previously unselected package m4. Preparing to unpack .../021-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../022-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../023-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../024-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../025-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../026-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../027-libparams-util-perl_1.102-2+b1_amd64.deb ... Unpacking libparams-util-perl (1.102-2+b1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../028-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../029-libdata-optlist-perl_0.113-1_all.deb ... Unpacking libdata-optlist-perl (0.113-1) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../030-libb-hooks-op-check-perl_0.22-2+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../031-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../032-libdevel-callchecker-perl_0.008-2_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.008-2) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../033-libparams-classify-perl_0.015-2+b1_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b1) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../034-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../035-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../036-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../037-libpackage-stash-perl_0.40-1_all.deb ... Unpacking libpackage-stash-perl (0.40-1) ... Selecting previously unselected package libclass-load-perl. Preparing to unpack .../038-libclass-load-perl_0.25-2_all.deb ... Unpacking libclass-load-perl (0.25-2) ... Selecting previously unselected package libio-stringy-perl. Preparing to unpack .../039-libio-stringy-perl_2.111-3_all.deb ... Unpacking libio-stringy-perl (2.111-3) ... Selecting previously unselected package libparams-validate-perl:amd64. Preparing to unpack .../040-libparams-validate-perl_1.31-1_amd64.deb ... Unpacking libparams-validate-perl:amd64 (1.31-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../041-libsub-exporter-perl_0.989-1_all.deb ... Unpacking libsub-exporter-perl (0.989-1) ... Selecting previously unselected package libgetopt-long-descriptive-perl. Preparing to unpack .../042-libgetopt-long-descriptive-perl_0.111-1_all.deb ... Unpacking libgetopt-long-descriptive-perl (0.111-1) ... Selecting previously unselected package libio-tiecombine-perl. Preparing to unpack .../043-libio-tiecombine-perl_1.005-3_all.deb ... Unpacking libio-tiecombine-perl (1.005-3) ... Selecting previously unselected package libmodule-pluggable-perl. Preparing to unpack .../044-libmodule-pluggable-perl_5.2-4_all.deb ... Unpacking libmodule-pluggable-perl (5.2-4) ... Selecting previously unselected package libstring-rewriteprefix-perl. Preparing to unpack .../045-libstring-rewriteprefix-perl_0.009-1_all.deb ... Unpacking libstring-rewriteprefix-perl (0.009-1) ... Selecting previously unselected package libapp-cmd-perl. Preparing to unpack .../046-libapp-cmd-perl_0.335-1_all.deb ... Unpacking libapp-cmd-perl (0.335-1) ... Selecting previously unselected package libboolean-perl. Preparing to unpack .../047-libboolean-perl_0.46-3_all.deb ... Unpacking libboolean-perl (0.46-3) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../048-libsub-uplevel-perl_0.2800-3_all.deb ... Unpacking libsub-uplevel-perl (0.2800-3) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../049-libtest-exception-perl_0.43-3_all.deb ... Unpacking libtest-exception-perl (0.43-3) ... Selecting previously unselected package libcarp-assert-more-perl. Preparing to unpack .../050-libcarp-assert-more-perl_2.2.0-1_all.deb ... Unpacking libcarp-assert-more-perl (2.2.0-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../051-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../052-libfile-homedir-perl_1.006-2_all.deb ... Unpacking libfile-homedir-perl (1.006-2) ... Selecting previously unselected package libclone-choose-perl. Preparing to unpack .../053-libclone-choose-perl_0.010-2_all.deb ... Unpacking libclone-choose-perl (0.010-2) ... Selecting previously unselected package libhash-merge-perl. Preparing to unpack .../054-libhash-merge-perl_0.302-1_all.deb ... Unpacking libhash-merge-perl (0.302-1) ... Selecting previously unselected package libjson-perl. Preparing to unpack .../055-libjson-perl_4.10000-1_all.deb ... Unpacking libjson-perl (4.10000-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../056-libexporter-tiny-perl_1.006000-1_all.deb ... Unpacking libexporter-tiny-perl (1.006000-1) ... Selecting previously unselected package liblist-moreutils-xs-perl. Preparing to unpack .../057-liblist-moreutils-xs-perl_0.430-3+b1_amd64.deb ... Unpacking liblist-moreutils-xs-perl (0.430-3+b1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../058-liblist-moreutils-perl_0.430-2_all.deb ... Unpacking liblist-moreutils-perl (0.430-2) ... Selecting previously unselected package liblog-log4perl-perl. Preparing to unpack .../059-liblog-log4perl-perl_1.57-1_all.deb ... Unpacking liblog-log4perl-perl (1.57-1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../060-libmouse-perl_2.5.10-1+b3_amd64.deb ... Unpacking libmouse-perl (2.5.10-1+b3) ... Selecting previously unselected package libmousex-nativetraits-perl. Preparing to unpack .../061-libmousex-nativetraits-perl_1.09-3_all.deb ... Unpacking libmousex-nativetraits-perl (1.09-3) ... Selecting previously unselected package libmousex-strictconstructor-perl. Preparing to unpack .../062-libmousex-strictconstructor-perl_0.02-3_all.deb ... Unpacking libmousex-strictconstructor-perl (0.02-3) ... Selecting previously unselected package libparse-recdescent-perl. Preparing to unpack .../063-libparse-recdescent-perl_1.967015+dfsg-4_all.deb ... Unpacking libparse-recdescent-perl (1.967015+dfsg-4) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../064-libpath-tiny-perl_0.144-1_all.deb ... Unpacking libpath-tiny-perl (0.144-1) ... Selecting previously unselected package libpod-pom-perl. Preparing to unpack .../065-libpod-pom-perl_2.01-4_all.deb ... Unpacking libpod-pom-perl (2.01-4) ... Selecting previously unselected package libregexp-common-perl. Preparing to unpack .../066-libregexp-common-perl_2017060201-3_all.deb ... Unpacking libregexp-common-perl (2017060201-3) ... Selecting previously unselected package libyaml-tiny-perl. Preparing to unpack .../067-libyaml-tiny-perl_1.73-1_all.deb ... Unpacking libyaml-tiny-perl (1.73-1) ... Selecting previously unselected package libconfig-model-perl. Preparing to unpack .../068-libconfig-model-perl_2.152-1_all.deb ... Unpacking libconfig-model-perl (2.152-1) ... Selecting previously unselected package libyaml-pp-perl. Preparing to unpack .../069-libyaml-pp-perl_0.035-1_all.deb ... Unpacking libyaml-pp-perl (0.035-1) ... Selecting previously unselected package cme. Preparing to unpack .../070-cme_1.038-1_all.deb ... Unpacking cme (1.038-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../071-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../072-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../073-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../074-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../075-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../076-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../077-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../078-libelf1_0.188-2.1_amd64.deb ... Unpacking libelf1:amd64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../079-dwz_0.15-1_amd64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../080-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../081-libxml2_2.9.14+dfsg-1.2_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../082-gettext_0.21-12_amd64.deb ... Unpacking gettext (0.21-12) ... 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Selecting previously unselected package libcpanel-json-xs-perl:amd64. Preparing to unpack .../439-libcpanel-json-xs-perl_4.35-1_amd64.deb ... Unpacking libcpanel-json-xs-perl:amd64 (4.35-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../440-libaliased-perl_0.34-3_all.deb ... Unpacking libaliased-perl (0.34-3) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../441-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../442-libdevel-stacktrace-perl_2.0400-2_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-2) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../443-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. 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Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../455-libemail-address-xs-perl_1.05-1+b1_amd64.deb ... Unpacking libemail-address-xs-perl (1.05-1+b1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../456-libipc-system-simple-perl_1.30-2_all.deb ... Unpacking libipc-system-simple-perl (1.30-2) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../457-libfile-basedir-perl_0.09-2_all.deb ... Unpacking libfile-basedir-perl (0.09-2) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../458-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../459-libfont-ttf-perl_1.06-2_all.deb ... Unpacking libfont-ttf-perl (1.06-2) ... Selecting previously unselected package libhtml-html5-entities-perl. 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Unpacking libfribidi0:amd64 (1.0.8-2.1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../517-libthai-data_0.1.29-1_all.deb ... Unpacking libthai-data (0.1.29-1) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../518-libdatrie1_0.2.13-2+b1_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.13-2+b1) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../519-libthai0_0.1.29-1_amd64.deb ... Unpacking libthai0:amd64 (0.1.29-1) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../520-libpango-1.0-0_1.50.12+ds-1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.50.12+ds-1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../521-libpangoft2-1.0-0_1.50.12+ds-1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. 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Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up libpixman-1-0:amd64 (0.42.2-1) ... Setting up plzip (1.10-5) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libwayland-server0:amd64 (1.21.0-1) ... Setting up libaom3:amd64 (3.6.0-1) ... Setting up libpciaccess0:amd64 (0.17-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libabsl20220623:amd64 (20220623.1-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libdouble-conversion3:amd64 (3.2.1-1) ... Setting up libpsl5:amd64 (0.21.2-1) ... Setting up libunicode-utf8-perl (0.62-2) ... Setting up libfftw3-single3:amd64 (3.3.10-1) ... Setting up libset-intspan-perl (1.19-3) ... Setting up libicu72:amd64 (72.1-3) ... Setting up libmpg123-0:amd64 (1.31.2-1) ... Setting up libogg0:amd64 (1.3.5-3) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up libpod-pom-perl (2.01-4) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libglvnd-core-dev:amd64 (1.6.0-1) ... Setting up hdf5-helpers (1.10.8+repack1-1) ... Setting up libwmflite-0.2-7:amd64 (0.2.12-5) ... Setting up libregexp-pattern-perl (0.2.14-2) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libdatrie1:amd64 (0.2.13-2+b1) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libglib2.0-0:amd64 (2.74.6-2) ... No schema files found: doing nothing. Setting up libcpanel-json-xs-perl:amd64 (4.35-1) ... Setting up libglvnd0:amd64 (1.6.0-1) ... Setting up libio-stringy-perl (2.111-3) ... Setting up libscotch-7.0:amd64 (7.0.3-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up liblog-any-perl (1.713-1) ... Setting up libqscintilla2-qt5-l10n (2.13.3+dfsg-3) ... Setting up libyaml-pp-perl (0.035-1) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libcbor0.8:amd64 (0.8.0-2+b1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libregexp-pattern-license-perl (3.9.4-3) ... Setting up libconvert-binhex-perl (1.125-3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up fonts-freefont-otf (20120503-10) ... Setting up libio-interactive-perl (1.023-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.31-2) ... Setting up libsensors-config (1:3.6.0-7.1) ... Setting up libnghttp2-14:amd64 (1.52.0-1) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libfftw3-long3:amd64 (3.3.10-1) ... Setting up libpath-iterator-rule-perl (1.015-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libclone-choose-perl (0.010-2) ... Setting up libqhull-r8.0:amd64 (2020.2-5) ... Setting up xkb-data (2.35.1-1) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libhwy1:amd64 (1.0.3-3) ... 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Setting up libxs-parse-sublike-perl:amd64 (0.16-1+b2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up liberror-perl (0.17029-2) ... Setting up libtrilinos-trilinosss-13.2:amd64 (13.2.0-4) ... Setting up libasound2-data (1.2.8-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libboolean-perl (0.46-3) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libpcre3:amd64 (2:8.39-15) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.33-1) ... Setting up libflac12:amd64 (1.4.2+ds-2) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libgles2:amd64 (1.6.0-1) ... Setting up libmunge2 (0.5.15-2) ... Setting up liblog-log4perl-perl (1.57-1) ... Setting up libtext-reform-perl (1.20-5) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libio-tiecombine-perl (1.005-3) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up aglfn (1.7+git20191031.4036a9c-2) ... Setting up libavahi-common-data:amd64 (0.8-10) ... Setting up libncurses6:amd64 (6.4-4) ... Setting up libgles1:amd64 (1.6.0-1) ... Setting up libdbus-1-3:amd64 (1.14.6-1) ... Setting up libfftw3-quad3:amd64 (3.3.10-1) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libopus0:amd64 (1.3.1-3) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libssl-dev:amd64 (3.0.8-1) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libhwloc15:amd64 (2.9.0-1) ... Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libvorbis0a:amd64 (1.3.7-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libtext-template-perl (1.61-1) ... Setting up libpod-parser-perl (1.65-1) ... Setting up autopoint (0.21-12) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libgav1-1:amd64 (0.18.0-1+b1) ... Setting up liblist-moreutils-xs-perl (0.430-3+b1) ... Setting up libsensors5:amd64 (1:3.6.0-7.1) ... Setting up libjxl0.7:amd64 (0.7.0-10) ... Setting up libdav1d6:amd64 (1.0.0-2) ... Setting up libltdl7:amd64 (2.4.7-5) ... Setting up libfftw3-double3:amd64 (3.3.10-1) ... Setting up libglapi-mesa:amd64 (22.3.6-1+deb12u1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up libmtdev1:amd64 (1.1.6-1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up autoconf (2.71-3) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libwebp7:amd64 (1.2.4-0.1) ... Setting up libarray-intspan-perl (2.004-2) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libexporter-lite-perl (0.09-2) ... Setting up libsub-name-perl:amd64 (0.26-2+b1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up libsyntax-keyword-try-perl (0.28-1) ... Setting up libnuma1:amd64 (2.0.16-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b2) ... Setting up libparse-recdescent-perl (1.967015+dfsg-4) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.1-1) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up libtiff6:amd64 (4.5.0-5) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up lzop (1.04-2) ... Setting up libjson-perl (4.10000-1) ... Setting up libasound2:amd64 (1.2.8-1+b1) ... Setting up liblog-any-adapter-screen-perl (0.140-2) ... Setting up libnl-3-200:amd64 (3.7.0-0.2+b1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.4-3) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libmd4c0:amd64 (0.4.8-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libmousex-strictconstructor-perl (0.02-3) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up liblua5.4-0:amd64 (5.4.4-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libaliased-perl (0.34-3) ... Setting up libthai-data (0.1.29-1) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libcxsparse3:amd64 (1:5.12.0+dfsg-2) ... Setting up libtext-autoformat-perl (1.750000-2) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1) ... Setting up libtoml-tiny-perl (0.15-1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.2) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libsort-versions-perl (1.62-3) ... Setting up libopengl-dev:amd64 (1.6.0-1) ... Setting up libexporter-tiny-perl (1.006000-1) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfido2-1:amd64 (1.12.0-2+b1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libde265-0:amd64 (1.0.11-1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libsamplerate0:amd64 (0.2.2-3) ... Setting up openssl (3.0.8-1) ... Setting up libwebpmux3:amd64 (1.2.4-0.1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up libdrm-common (2.4.114-1) ... Setting up libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libevdev2:amd64 (1.13.0+dfsg-1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libtext-levenshtein-damerau-perl (0.41-3) ... Setting up libsereal-decoder-perl (5.003+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up libsuitesparseconfig5:amd64 (1:5.12.0+dfsg-2) ... Setting up liburi-perl (5.17-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libgudev-1.0-0:amd64 (237-2) ... Setting up libmp3lame0:amd64 (3.100-6) ... Setting up libblas-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libvorbisenc2:amd64 (1.3.7-1) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libwacom-common (2.6.0-1) ... Setting up libmousex-nativetraits-perl (1.09-3) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libxkbcommon0:amd64 (1.5.0-1) ... Setting up libwayland-client0:amd64 (1.21.0-1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2022.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gnuplot-data (5.4.4+dfsg1-2) ... Setting up libamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libncurses-dev:amd64 (6.4-4) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up gettext (0.21-12) ... Setting up libfeature-compat-try-perl (0.05-1) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libxau-dev:amd64 (1:1.0.9-1) ... Setting up libcolamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libavif15:amd64 (0.11.1-1) ... Setting up libxcb-xinput0:amd64 (1.15-1) ... Setting up libtool (2.4.7-5) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up libfftw3-bin (3.3.10-1) ... Setting up libwacom9:amd64 (2.6.0-1) ... Setting up fontconfig-config (2.14.1-4) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libxcb-glx0:amd64 (1.15-1) ... Setting up libpod-constants-perl (0.19-2) ... Setting up libedit2:amd64 (3.1-20221030-2) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libhash-merge-perl (0.302-1) ... Setting up libxcb-keysyms1:amd64 (0.4.0-1+b2) ... Setting up libaec-dev:amd64 (1.0.6-1+b1) ... Setting up libarpack2:amd64 (3.8.0-3) ... Setting up libxcb-shape0:amd64 (1.15-1) ... Setting up libavahi-common3:amd64 (0.8-10) ... Setting up libjpeg-dev:amd64 (1:2.1.5-2) ... Setting up libsuperlu5:amd64 (5.3.0+dfsg1-2+b1) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libxcb-render-util0:amd64 (0.3.9-1+b1) ... Setting up libgfortran-12-dev:amd64 (12.2.0-14) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libxcb-icccm4:amd64 (0.4.1-1.1) ... Setting up libsundials-sunmatrix4:amd64 (6.4.1+dfsg1-3) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libreadline-dev:amd64 (8.2-1.3) ... Setting up libqrupdate1:amd64 (1.1.2-4) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up libsundials-ida6:amd64 (6.4.1+dfsg1-3) ... Setting up libxcb-util1:amd64 (0.4.0-1+b1) ... Setting up libinput-bin (1.22.1-1) ... Setting up libxcb-xkb1:amd64 (1.15-1) ... Setting up libxcb-image0:amd64 (0.4.0-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... Setting up libobject-pad-perl (0.78-1) ... Setting up libxcb-present0:amd64 (1.15-1) ... Setting up dh-autoreconf (20) ... Setting up patchutils (0.4.2-1) ... Setting up libthai0:amd64 (0.1.29-1) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libcamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up gfortran-12 (12.2.0-14) ... Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libxcb-xinerama0:amd64 (1.15-1) ... Setting up libtest-exception-perl (0.43-3) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5) ... Setting up libglpk40:amd64 (5.0-1) ... Setting up libstring-copyright-perl (0.003014-1) ... Setting up libxcb-sync1:amd64 (1.15-1) ... Setting up shared-mime-info (2.2-1) ... Setting up libxkbcommon-x11-0:amd64 (1.5.0-1) ... Setting up liblapack-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libdata-optlist-perl (0.113-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libqt5core5a:amd64 (5.15.8+dfsg-7) ... Setting up libx265-199:amd64 (3.5-2+b1) ... Setting up libxcb-dri2-0:amd64 (1.15-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libjack-jackd2-0:amd64 (1.9.21~dfsg-3) ... Setting up libdrm2:amd64 (2.4.114-1+b1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libklu1:amd64 (1:5.12.0+dfsg-2) ... Setting up libqt5dbus5:amd64 (5.15.8+dfsg-7) ... Setting up libccolamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libxcb-randr0:amd64 (1.15-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up libllvm15:amd64 (1:15.0.6-4+b1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libcurl4:amd64 (7.88.1-9) ... Setting up libx11-6:amd64 (2:1.8.4-2) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up libsndfile1:amd64 (1.2.0-1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libfftw3-dev:amd64 (3.3.10-1) ... Setting up libavahi-client3:amd64 (0.8-10) ... Setting up libcholmod3:amd64 (1:5.12.0+dfsg-2) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.114-1+b1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up libinput10:amd64 (1.22.1-1) ... Setting up libspqr2:amd64 (1:5.12.0+dfsg-2) ... Setting up libportaudio2:amd64 (19.6.0-1.2) ... Setting up libx11-xcb1:amd64 (2:1.8.4-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libibverbs1:amd64 (44.0-2) ... Setting up fontconfig (2.14.1-4) ... Regenerating fonts cache... done. Setting up libcarp-assert-more-perl (2.2.0-1) ... Setting up libdrm-nouveau2:amd64 (2.4.114-1+b1) ... Setting up libxcb1-dev:amd64 (1.15-1) ... Setting up libxpm4:amd64 (1:3.5.12-1.1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libgbm1:amd64 (22.3.6-1+deb12u1) ... Setting up ibverbs-providers:amd64 (44.0-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libdrm-radeon1:amd64 (2.4.114-1+b1) ... Setting up openssh-client (1:9.2p1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libpango-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libdrm-intel1:amd64 (2.4.114-1+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libgl1-mesa-dri:amd64 (22.3.6-1+deb12u1) ... Setting up libheif1:amd64 (1.15.1-1) ... Setting up libx11-dev:amd64 (2:1.8.4-2) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libcurl3-gnutls:amd64 (7.88.1-9) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.16.0-7) ... Setting up libqt5network5:amd64 (5.15.8+dfsg-7) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libxnvctrl0:amd64 (525.85.05-1) ... Setting up libfeature-compat-class-perl (0.05-1) ... Setting up libqt5sql5:amd64 (5.15.8+dfsg-7) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libqt5xml5:amd64 (5.15.8+dfsg-7) ... Setting up libegl-mesa0:amd64 (22.3.6-1+deb12u1) ... Setting up libumfpack5:amd64 (1:5.12.0+dfsg-2) ... Setting up libnet-smtp-ssl-perl (1.04-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libmailtools-perl (2.21-2) ... Setting up libxfixes3:amd64 (1:6.0.0-2) ... Setting up libcurl4-openssl-dev:amd64 (7.88.1-9) ... Setting up libconfig-model-perl (2.152-1) ... Setting up libxinerama1:amd64 (2:1.1.4-3) ... Setting up libgd3:amd64 (2.3.3-9) ... Setting up libgraphicsmagick-q16-3 (1.4+really1.3.40-4) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcups2:amd64 (2.4.2-3) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libdata-section-perl (0.200008-1) ... Setting up libhdf5-cpp-103-1:amd64 (1.10.8+repack1-1) ... Setting up libegl1:amd64 (1.6.0-1) ... Setting up libgraphicsmagick++-q16-12 (1.4+really1.3.40-4) ... Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libstring-rewriteprefix-perl (0.009-1) ... Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up libconfig-model-backend-yaml-perl (2.134-2) ... Setting up librdmacm1:amd64 (44.0-2) ... Setting up libucx0:amd64 (1.13.1-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libglx-mesa0:amd64 (22.3.6-1+deb12u1) ... Setting up libglx0:amd64 (1.6.0-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up libxcursor1:amd64 (1:1.2.1-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up debhelper (13.11.4) ... Setting up libhwloc-plugins:amd64 (2.9.0-1) ... Setting up libmime-tools-perl (5.510-1) ... Setting up libsoftware-license-perl (0.104002-1) ... Setting up libclass-load-perl (0.25-2) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.8+repack1-1) ... Setting up libgl1:amd64 (1.6.0-1) ... Setting up libhdf5-fortran-102:amd64 (1.10.8+repack1-1) ... Setting up texinfo (6.8-6+b1) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.8+repack1-1) ... Setting up libglx-dev:amd64 (1.6.0-1) ... Setting up gnuplot-nox (5.4.4+dfsg1-2+b2) ... update-alternatives: using /usr/bin/gnuplot-nox to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libparams-validate-perl:amd64 (1.31-1) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libgl-dev:amd64 (1.6.0-1) ... Setting up libfabric1:amd64 (1.17.0-3) ... Setting up libegl-dev:amd64 (1.6.0-1) ... Setting up libpmix2:amd64 (4.2.2-1+b1) ... Setting up libsoftware-licensemoreutils-perl (1.009-1) ... Setting up libopenmpi3:amd64 (4.1.4-3+b1) ... Setting up libfltk1.3:amd64 (1.3.8-5) ... Setting up libfltk-gl1.3:amd64 (1.3.8-5) ... Setting up libqt5gui5:amd64 (5.15.8+dfsg-7) ... Setting up libqt5widgets5:amd64 (5.15.8+dfsg-7) ... Setting up libfftw3-mpi3:amd64 (3.3.10-1) ... Setting up libqt5help5:amd64 (5.15.8-2) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... Setting up libqt5printsupport5:amd64 (5.15.8+dfsg-7) ... Setting up libtrilinos-teuchos-13.2:amd64 (13.2.0-4) ... Setting up dh-octave-autopkgtest (1.2.7) ... Setting up libtrilinos-epetra-13.2:amd64 (13.2.0-4) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnamespace-clean-perl (0.27-2) ... Setting up libstring-license-perl (0.0.2-1) ... Setting up libgetopt-long-descriptive-perl (0.111-1) ... Setting up libtrilinos-aztecoo-13.2:amd64 (13.2.0-4) ... Setting up libgles-dev:amd64 (1.6.0-1) ... Setting up libtrilinos-triutils-13.2:amd64 (13.2.0-4) ... Setting up openmpi-bin (4.1.4-3+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up licensecheck (3.3.5-1) ... Setting up libhdf5-openmpi-103-1:amd64 (1.10.8+repack1-1) ... Setting up libptscotch-7.0:amd64 (7.0.3-1) ... Setting up libcombblas1.16.0:amd64 (1.6.2-8) ... Setting up libsuperlu-dist8:amd64 (8.1.2+dfsg1-1+b1) ... Setting up libapp-cmd-perl (0.335-1) ... Setting up mpi-default-bin (1.14) ... Setting up libglvnd-dev:amd64 (1.6.0-1) ... Setting up libqscintilla2-qt5-15:amd64 (2.13.3+dfsg-3) ... Setting up libtrilinos-zoltan-13.2:amd64 (13.2.0-4) ... Setting up libtrilinos-epetraext-13.2:amd64 (13.2.0-4) ... Setting up libtrilinos-galeri-13.2:amd64 (13.2.0-4) ... Setting up cme (1.038-1) ... Setting up libgl1-mesa-dev:amd64 (22.3.6-1+deb12u1) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-2+b1) ... Setting up libhypre-2.26.0:amd64 (2.26.0-3) ... Setting up libmumps-5.5:amd64 (5.5.1-1) ... Setting up libtrilinos-amesos-13.2:amd64 (13.2.0-4) ... Setting up libtrilinos-ifpack-13.2:amd64 (13.2.0-4) ... Setting up libtrilinos-ml-13.2:amd64 (13.2.0-4) ... Setting up libpetsc-real3.18:amd64 (3.18.5+dfsg1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.18.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.18 (libpetsc.so.3.18) in auto mode Setting up libsundials-nvecparallel-petsc6:amd64 (6.4.1+dfsg1-3) ... Setting up libsundials-sunlinsol3:amd64 (6.4.1+dfsg1-3) ... Setting up octave (7.3.0-2) ... Setting up octave-dev (7.3.0-2) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libwww-perl (6.68-1) ... Setting up libparse-debcontrol-perl (2.005-6) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.16-1) ... Setting up lintian (2.116.3) ... Setting up libconfig-model-dpkg-perl (2.165) ... Setting up dh-octave (1.2.7) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/octave-stk-2.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../octave-stk_2.7.0-3_source.changes dpkg-buildpackage: info: source package octave-stk dpkg-buildpackage: info: source version 2.7.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Rafael Laboissière dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=octave dh_auto_clean -O--buildsystem=octave dh_octave_clean make[1]: Entering directory '/build/octave-stk-2.7.0/src' rm -f *.o *.mex make[1]: *** No rule to make target 'distclean'. make[1]: Leaving directory '/build/octave-stk-2.7.0/src' dh_autoreconf_clean -O--buildsystem=octave dh_clean -O--buildsystem=octave debian/rules binary dh binary --buildsystem=octave dh_update_autotools_config -O--buildsystem=octave dh_autoreconf -O--buildsystem=octave dh_octave_version -O--buildsystem=octave Checking the Octave version... ok dh_auto_configure -O--buildsystem=octave dh_auto_build -O--buildsystem=octave dh_auto_test -O--buildsystem=octave create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=octave dh_prep -O--buildsystem=octave dh_auto_install --destdir=debian/octave-stk/ -O--buildsystem=octave octave --no-gui --no-history --silent --no-init-file --no-window-system /usr/share/dh-octave/install-pkg.m /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages /build/octave-stk-2.7.0/debian/octave-stk/usr/lib/x86_64-linux-gnu/octave/packages make[1]: Entering directory '/build/octave-stk-2.7.0/src' /usr/bin/mkoctfile --verbose --mex --output __stk_dist_pairwise__.mex stk_dist_pairwise.c /usr/bin/mkoctfile --verbose --mex --output __get_column_number__.mex get_column_number.c /usr/bin/mkoctfile --verbose --mex --output __stk_dist_matrixy__.mex stk_dist_matrixy.c /usr/bin/mkoctfile --verbose --mex --output __stk_filldist_discr_mex__.mex stk_filldist_discr_mex.c /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_matrixy__.mex stk_gpquadform_matrixy.c /usr/bin/mkoctfile --verbose --mex --output __stk_isdominated_mex__.mex stk_isdominated_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG get_column_number.c -o /tmp/oct-z7YqEJ.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_pairwise.c -o /tmp/oct-AWaG2w.o /usr/bin/mkoctfile --verbose --mex --output __stk_mindist_mex__.mex stk_mindist_mex.c /usr/bin/mkoctfile --verbose --mex --output __stk_dist_matrixx__.mex stk_dist_matrixx.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_matrixy.c -o /tmp/oct-ZxSlCL.o /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_matrixx__.mex stk_gpquadform_matrixx.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_matrixy.c -o /tmp/oct-bWFvEn.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_filldist_discr_mex.c -o /tmp/oct-rZ0k0l.o /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_pairwise__.mex stk_gpquadform_pairwise.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_isdominated_mex.c -o /tmp/oct-j8b4fb.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_mindist_mex.c -o /tmp/oct-ohkPEW.o /usr/bin/mkoctfile --verbose --mex --output __stk_paretofind_mex__.mex stk_paretofind_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_matrixx.c -o /tmp/oct-C6sjoW.o /usr/bin/mkoctfile --verbose --mex --output __stk_sampling_vdc_rr2__.mex stk_sampling_vdc_rr2.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_matrixx.c -o /tmp/oct-umuEbC.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_pairwise.c -o /tmp/oct-y16LCL.o /usr/bin/mkoctfile --verbose --mex --output __stk_sampling_sobol_mex__.mex stk_sampling_sobol_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_paretofind_mex.c -o /tmp/oct-zVEMu3.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_sampling_vdc_rr2.c -o /tmp/oct-ZY5kpd.o /usr/bin/mkoctfile --verbose --mex --output __stk_distrib_bivnorm0_cdf__.mex stk_distrib_bivnorm0_cdf.c /usr/bin/mkoctfile --verbose --mex --output __stk_dominatedhv_mex__.mex stk_dominatedhv_mex.c wfg.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_sampling_sobol_mex.c -o /tmp/oct-EnIwSq.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_distrib_bivnorm0_cdf.c -o /tmp/oct-TP8iEW.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dominatedhv_mex.c -o /tmp/oct-kDLBU6.o g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_dist_pairwise__.mex /tmp/oct-AWaG2w.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_mindist_mex__.mex /tmp/oct-ohkPEW.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_dist_matrixy__.mex /tmp/oct-ZxSlCL.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_gpquadform_pairwise__.mex /tmp/oct-y16LCL.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_filldist_discr_mex__.mex /tmp/oct-rZ0k0l.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_gpquadform_matrixx__.mex /tmp/oct-umuEbC.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_gpquadform_matrixy__.mex /tmp/oct-bWFvEn.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __get_column_number__.mex /tmp/oct-z7YqEJ.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_dist_matrixx__.mex /tmp/oct-C6sjoW.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_isdominated_mex__.mex /tmp/oct-j8b4fb.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_paretofind_mex__.mex /tmp/oct-zVEMu3.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG wfg.c -o /tmp/oct-9r6UoB.o g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_sampling_vdc_rr2__.mex /tmp/oct-ZY5kpd.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_sampling_sobol_mex__.mex /tmp/oct-EnIwSq.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_distrib_bivnorm0_cdf__.mex /tmp/oct-TP8iEW.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro g++ -I/usr/include/octave-7.3.0/octave/.. -I/usr/include/octave-7.3.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-stk-2.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -o __stk_dominatedhv_mex__.mex /tmp/oct-kDLBU6.o /tmp/oct-9r6UoB.o -shared -Wl,-Bsymbolic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu -shared -Wl,-Bsymbolic -Wl,-z,relro make[1]: Leaving directory '/build/octave-stk-2.7.0/src' copyfile /build/octave-stk-2.7.0/./src/__get_column_number__.mex /build/octave-stk-2.7.0/./src/__stk_dist_matrixx__.mex /build/octave-stk-2.7.0/./src/__stk_dist_matrixy__.mex /build/octave-stk-2.7.0/./src/__stk_dist_pairwise__.mex /build/octave-stk-2.7.0/./src/__stk_distrib_bivnorm0_cdf__.mex /build/octave-stk-2.7.0/./src/__stk_dominatedhv_mex__.mex /build/octave-stk-2.7.0/./src/__stk_filldist_discr_mex__.mex /build/octave-stk-2.7.0/./src/__stk_gpquadform_matrixx__.mex /build/octave-stk-2.7.0/./src/__stk_gpquadform_matrixy__.mex /build/octave-stk-2.7.0/./src/__stk_gpquadform_pairwise__.mex /build/octave-stk-2.7.0/./src/__stk_isdominated_mex__.mex /build/octave-stk-2.7.0/./src/__stk_mindist_mex__.mex /build/octave-stk-2.7.0/./src/__stk_paretofind_mex__.mex /build/octave-stk-2.7.0/./src/__stk_sampling_sobol_mex__.mex /build/octave-stk-2.7.0/./src/__stk_sampling_vdc_rr2__.mex /build/octave-stk-2.7.0/./inst/x86_64-pc-linux-gnu-api-v57 For information about changes from previous versions of the stk package, run 'news stk'. dh_octave_check -O--buildsystem=octave Checking package... Checking m files ... [inst/utils/stk_generate_samplepaths.m] >>>>> /build/octave-stk-2.7.0/inst/utils/stk_generate_samplepaths.m ***** shared model, xi, zi, xt, n, nb_paths dim = 1; n = 50; nb_paths = 5; model = stk_model (@stk_materncov32_iso, dim); model.param = log ([1.0; 2.9]); xt = stk_sampling_regulargrid (n, dim, [-1.0; 1.0]); xi = [xt(1, :); xt(end, :)]; zi = [0; 0]; ***** error zsim = stk_generate_samplepaths (); ***** error zsim = stk_generate_samplepaths (model); ***** test zsim = stk_generate_samplepaths (model, xt); ***** test zsim = stk_generate_samplepaths (model, xt, nb_paths); ***** test zsim = stk_generate_samplepaths (model, xi, zi, xt); ***** test zsim = stk_generate_samplepaths (model, xi, zi, xt, nb_paths); ***** test zsim = stk_generate_samplepaths (model, xt); assert (isequal (size (zsim), [n, 1])); ***** test zsim = stk_generate_samplepaths (model, xt, nb_paths); assert (isequal (size (zsim), [n, nb_paths])); ***** test % duplicate simulation points zsim = stk_generate_samplepaths (model, [xt; xt], nb_paths); assert (isequal (size (zsim), [2 * n, nb_paths])); assert (isequal (zsim(1:n, :), zsim((n + 1):end, :))); ***** test % simulation points equal to observation points (noiseless model) % https://sourceforge.net/p/kriging/tickets/14/ zsim = stk_generate_samplepaths (model, xt, zeros (n, 1), xt); assert (isequal (zsim, zeros (n, 1))); 10 tests, 10 passed, 0 known failure, 0 skipped [inst/utils/stk_conditioning.m] >>>>> /build/octave-stk-2.7.0/inst/utils/stk_conditioning.m ***** shared n, m, ni, xi_ind, lambda, zsim, zi n = 50; m = 5; ni = 10; xi_ind = 1:ni; lambda = 1/ni * ones (ni, n); % prediction == averaging zsim = ones (n, m); % const unconditioned samplepaths zi = zeros (ni, 1); % conditioning by zeros ***** error zsimc = stk_conditioning (); ***** error zsimc = stk_conditioning (lambda); ***** error zsimc = stk_conditioning (lambda, zi); ***** test zsimc = stk_conditioning (lambda, zi, zsim); ***** test zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); ***** test zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); assert (stk_isequal_tolabs (double (zsimc), zeros (n, m))); ***** test zi = 2 * ones (ni, 1); % conditioning by twos zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); assert (stk_isequal_tolabs (double (zsimc), 2 * ones (n, m))); ***** test DIM = 1; nt = 400; xt = stk_sampling_regulargrid (nt, DIM, [-1.0; 1.0]); NI = 6; xi_ind = [1 20 90 200 300 350]; xi = xt(xi_ind, 1); zi = (1:NI)'; % linear response ;-) % Carry out the kriging prediction at points xt model = stk_model (@stk_materncov52_iso); model.param = log ([1.0; 2.9]); [ignore_zp, lambda] = stk_predict (model, xi, [], xt); % Generate (unconditional) sample paths according to the model NB_PATHS = 10; zsim = stk_generate_samplepaths (model, xt, NB_PATHS); zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_vdc_rr2.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_vdc_rr2.m ***** error __stk_sampling_vdc_rr2__() % two inputs required ***** error __stk_sampling_vdc_rr2__(10) % two inputs required ***** error __stk_sampling_vdc_rr2__(10, 3, -1) % two inputs required ***** test n = 300; j = 25; x = __stk_sampling_vdc_rr2__(n, j); assert(isequal(size(x), [n 1])) ***** test x = __stk_sampling_vdc_rr2__(2000, 7); y = double (x(1998:2000, :)); yref = [0.849786281294525; 0.085080398941584; 0.555668634235701]; assert(stk_isequal_tolrel(y, yref, 1e-13)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_regulargrid.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_regulargrid.m ***** shared x, n, dim, box n = 9; dim = 2; box = [0, 0; 1, 1]; ***** error x = stk_sampling_regulargrid (); ***** test x = stk_sampling_regulargrid (n); ***** test x = stk_sampling_regulargrid (n, dim); ***** test x = stk_sampling_regulargrid (n, dim, box); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isa (x, 'stk_factorialdesign')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_regulargrid (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:3, n = 3^dim; x = stk_sampling_regulargrid(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end ***** test nn = [3 4 5]; for dim = 1:3, x = stk_sampling_regulargrid(nn(1:dim), dim); assert(isequal(size(x), [prod(nn(1:dim)) dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end 10 tests, 10 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_randunif.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_randunif.m ***** shared x, n, dim, box n = 10; dim = 2; box = [0, 0; 2, 2]; ***** error x = stk_sampling_randunif (); ***** test x = stk_sampling_randunif (n); ***** test x = stk_sampling_randunif (n, dim); ***** test x = stk_sampling_randunif (n, dim, box); ***** assert (isa(x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_randunif (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randunif(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end 8 tests, 8 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_randomlhs.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_randomlhs.m ***** shared x, n, dim, box n = 10; dim = 2; box = [0, 0; 1, 1]; ***** error x = stk_sampling_randomlhs (); ***** test x = stk_sampling_randomlhs (n); ***** test x = stk_sampling_randomlhs (n, dim); ***** test x = stk_sampling_randomlhs (n, dim, box); ***** assert (isa(x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_randomlhs (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randomlhs(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); assert(stk_is_lhs(x, n, dim)); end 8 tests, 8 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_olhs.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_olhs.m ***** shared x, n, d, box, permut n = 5; d = 2; box = [0 0; 1, 1]; permut = 1:2; ***** error x = stk_sampling_olhs(); ***** test x = stk_sampling_olhs(n); ***** test x = stk_sampling_olhs(n, d); ***** test x = stk_sampling_olhs(n, d, box); ***** test x = stk_sampling_olhs(n, d, box, permut); ***** error x = stk_sampling_olhs(n, d, box, permut, pi); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_olhs (n, d, box); assert (isequal (x.colnames, cn)); ***** test for r = 1:5 n = 2 ^ (r + 1) + 1; d = 2 * r; x = stk_sampling_olhs (n, d); assert (isequal (size (x), [n d])); box = repmat ([-1; 1], 1, d); assert (stk_is_lhs (x, n, d, box)); x = double (x); w = x' * x; assert (stk_isequal_tolabs (w / w(1,1), eye (d))); end 10 tests, 10 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_nestedlhs.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_nestedlhs.m ***** shared x, n, dim, box, niter, levels n = [48; 12; 4; 2]; dim = 2; box = [0, 0; 4, 4]; niter = 10; levels = [10.1; 15.2; -9.3; 2.4; 17.5]; ***** error x = stk_sampling_nestedlhs (); ***** test x = stk_sampling_nestedlhs (n); ***** test x = stk_sampling_nestedlhs (n, dim); ***** test x = stk_sampling_nestedlhs (n, dim, box); ***** test x = stk_sampling_nestedlhs (n, dim, box, niter); ***** test x = stk_sampling_nestedlhs (n, dim, box, niter, levels); ***** assert ( isequal(size(x), [sum(n), dim + 1]) ); ***** assert ( isa(x, 'stk_dataframe') ); cn = [0; cumsum(n)]; for lev = 1:length(n), y = x( (cn(lev) + 1):(cn(lev + 1)), 1:dim ); assert (isequal (size (y), [n(lev) dim])); assert (stk_is_lhs (y, n(lev), dim, box)); if lev > 1 assert ( isequal(z((end - n(lev) + 1):end, :), y) ); end z = y; end ***** assert (isequal (x.colnames{dim + 1}, 'Level')); levels = stk_dataframe(levels, {'t'}); box = stk_hrect(box, {'x1', 'x2', 'x3', 'x4'}); ***** test x = stk_sampling_nestedlhs (n, [], box, [], levels); ***** assert (isequal(x.colnames, {'x1', 'x2', 'x3', 'x4', 't'}) ); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_nesteddesign.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_nesteddesign.m ***** shared x, n, dim, box, niter, levels n = [23; 14; 5; 2]; dim = 2; box = [0, 0; 4, 4]; niter = 10; levels = [10.1; 15.2; -9.3; 2.4; 17.5]; ***** error x = stk_sampling_nesteddesign (); ***** test x = stk_sampling_nesteddesign (n); ***** test x = stk_sampling_nesteddesign (n, dim); ***** test x = stk_sampling_nesteddesign (n, dim, box); ***** test x = stk_sampling_nesteddesign (n, dim, box, niter); ***** test x = stk_sampling_nesteddesign (n, dim, box, niter, levels); ***** assert ( isequal(size(x), [sum(n), dim + 1]) ); ***** assert ( isa(x, 'stk_dataframe') ); cn = [0; cumsum(n)]; for lev = 1:length(n), y = x( (cn(lev) + 1):(cn(lev + 1)), 1:dim ); assert (isequal (size (y), [n(lev) dim])); if lev > 1 assert ( isequal(z((end - n(lev) + 1):end, :), y) ); end if lev == length(n) assert (stk_is_lhs (y, n(lev), dim, box)); end z = y; end ***** assert (isequal (x.colnames{dim + 1}, 'Level')); levels = stk_dataframe(levels, {'t'}); box = stk_hrect(box, {'x1', 'x2', 'x3', 'x4'}); ***** test x = stk_sampling_nesteddesign (n, [], box, [], levels); ***** assert (isequal(x.colnames, {'x1', 'x2', 'x3', 'x4', 't'}) ); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_maximinlhs.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_maximinlhs.m ***** shared x, n, dim, box, niter n = 20; dim = 2; box = [0, 0; 1, 1]; niter = 1; ***** error x = stk_sampling_maximinlhs (); ***** test x = stk_sampling_maximinlhs (n); ***** test x = stk_sampling_maximinlhs (n, dim); ***** test x = stk_sampling_maximinlhs (n, dim, box); ***** test x = stk_sampling_maximinlhs (n, dim, box, niter); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_maximinlhs (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randomlhs (n, dim); assert (isequal (size (x), [n dim])); u = double (x); u = u(:); assert (~ any (isnan (u) | isinf (u))); assert ((min (u) >= 0) && (max (u) <= 1)); assert (stk_is_lhs (x, n, dim)); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_halton_rr2.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampling_halton_rr2.m ***** error stk_sampling_halton_rr2 () % nargin < 1 ***** test n = 300; d = 25; x = stk_sampling_halton_rr2 (n, d); assert (isequal (size (x), [n d])) ***** test x = stk_sampling_halton_rr2 (1000, 3); y = double (x(end, :)); yref = [0.9052734375 0.028349336991312 0.74848]; assert (stk_isequal_tolrel (y, yref, 1e-13)); ***** test dim = 2; box = stk_hrect (dim); x = stk_sampling_halton_rr2 (5, dim, box); assert (isequal (x.colnames, {})); ***** test dim = 2; cn = {'W', 'H'}; box = stk_hrect (dim, cn); x = stk_sampling_halton_rr2 (5, dim, box); assert (isequal (x.colnames, cn)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_ei_eval.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampcrit_ei_eval.m ***** error EI = stk_sampcrit_ei_eval () % not enough args ***** error EI = stk_sampcrit_ei_eval (0) % not enough args ***** shared xi, zi, M_prior, xt, zp, EIref, EI1, EI2, EI3 xi = [0; 0.2; 0.7; 0.9]; zi = [1; 0.9; 0.6; 0.1]; M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); xt = stk_sampling_regulargrid (20, 1, [0; 1]); zp = stk_predict (M_prior, xi, zi, xt); EIref = stk_distrib_normal_ei (min (zi), zp.mean, sqrt (zp.var), true); ***** test % Current syntax (STK 2.4.1 and later) EI1 = stk_sampcrit_ei_eval (zp.mean, sqrt (zp.var), min (zi)); ***** assert (isequal (EI1, EIref)) 4 tests, 4 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_ehvi_eval.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampcrit_ehvi_eval.m ***** shared zr, zi zr = [1 1]; zi = [0.25 0.75; 0.5 0.5; 0.75 0.25]; ***** test % no improvement (1 computation) zp_mean = [0.6 0.6]; zp_std = [0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, 0, 1e-12)); ***** test % guaranteed improvement (1 computation) zp_mean = [0 0]; zp_std = [0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, 10 * 0.25 ^ 2)); ***** test % no improvement again (2 computations) zp_mean = [0.5 0.5; 0.6 0.6]; zp_std = [0 0; 0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, [0; 0], 1e-12)); ***** test % no observation -> EHVI wrt zr zp_mean = [0.6 0.6]; zp_std = 0.01 * [1 1]; zi = []; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, (1 - 0.6)^2, 1e-12)); ***** test % no observation below zr -> EHVI wrt zr zp_mean = [0.6 0.6]; zp_std = 0.01 * [1 1]; zi = [2 2]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, (1 - 0.6)^2, 1e-12)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_akg_eval.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_sampcrit_akg_eval.m ***** shared zc_mean, zc_std, zr_mean, zr_std, zcr_cov, AKG, nc xi = [0; 0.2; 0.7; 0.9]; zi = [1; 0.9; 0.6; 0.1] - 10; ni = 4; M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); M_prior.lognoisevariance = 0.678; nc = 20; xc = stk_sampling_regulargrid (nc, 1, [0; 1]); [zp, ~, ~, K] = stk_predict (M_prior, xi, zi, [xi; xc]); ir = 1:ni; ic = ni + (1:nc); zc_mean = zp.mean(ic); zc_std = sqrt (zp.var(ic)); % reference grid: current evaluation points ("KGCP") zr_mean = zp.mean(ir); zr_std = sqrt (zp.var(ir)); zcr_cov = K(ic, ir); ***** test AKG = stk_sampcrit_akg_eval (zc_mean, zc_std, zr_mean, zr_std, zcr_cov); ***** assert (isequal (size (AKG), [nc 1])) ***** assert (all (AKG >= 0)) ***** error AKG = stk_sampcrit_akg_eval (zc_mean, zc_std, zr_mean, zr_std); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/sampling/stk_halfpintl.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/stk_halfpintl.m ***** test % case #1 a = 1; b = 1; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 1) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #2: two lines, slopes not equal, already sorted a = [1; -1]; b = [0; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #3: same as #2, but not sorted a = [-1; 1]; b = [ 2; 0]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #4: two lines, equal slopes, already sorted a = [0; 0]; b = [1; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 0) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #5: same as #4, but not sorted a = [0; 0]; b = [2; 1]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 0) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #6: add a dominated line to #2 (the result does not change) a = [1; -1; 0]; b = [0; 2; 1]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #7: permutation of #6 a = [1; 0; -1]; b = [0; 1; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #8: another permutation of #6 a = [0; 1; -1]; b = [1; 0; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #9: same as #8, with some duplicated lines added a = [0; 1; 0; -1; 0; -1; 1]; b = [1; 0; 1; 2; 1; 2; 0]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) 9 tests, 9 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_eqi/stk_sampcrit_eqi.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/@stk_sampcrit_eqi/stk_sampcrit_eqi.m ***** shared F, M, EQI M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); warning: Something went wrong during the optimization crit0 = 2.594852, crit_opt = 2.594852: crit0 < crit_opt ***** test F = stk_sampcrit_eqi () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | quantile_order: 0.5 | point_batch_size: 1 | current_minimum: Inf | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (F.quantile_order == 0.5) ***** assert (get (F, 'quantile_order') == 0.5) ***** assert (F.current_minimum == +inf) ***** assert (get (F, 'current_minimum') == +inf) ***** error F.toto ***** error get (F, 'toto') ***** error F.current_min = 1.234; % read-only ***** error F = set (F, 'current_min', 1.234); % read-only ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** test F = set (F, 'quantile_order', 0.8); assert (F.quantile_order == 0.8) ***** error F.quantile_order = 1.1; ***** error F.quantile_order = -0.1; ***** error F.quantile_order = [1 2]; ***** error F.current_minimum = 3.333; % read-only ***** error F.quantile_value = 2.222; % read-only ***** error EQI = feval (F, 1.0); ***** test F = stk_sampcrit_eqi (); F.model = M; assert (~ isempty (F.model)); ***** test F = stk_sampcrit_eqi (); F = set (F, 'model', M); assert (~ isempty (F.model)); ***** test F.model = []; % remove model assert (isempty (F.model)); assert (F.current_minimum == +inf); ***** test F = stk_sampcrit_eqi (M) % ending ";" omitted on purpose, to test disp F = | | model: | quantile_order: 0.5 | point_batch_size: 1 | current_minimum: 1.234 | ***** assert (isequal (F.model, M)) ***** assert (stk_isequal_tolrel (F.current_minimum, 1.234, 10 * eps)); ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EQI), [3 1])) ***** assert (all (EQI >= 0)) ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** shared F, M, EQI prior_model = stk_model (); prior_model.lognoisevariance = 0.678; M = stk_model_gpposterior (prior_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_eqi (M); ***** assert (isequal (F.model, M)) ***** assert (stk_isequal_tolrel (F.current_minimum, 2.077997, 1e-5)); ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EQI), [3 1])) ***** assert (all (EQI >= 0)) ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** shared F ***** test F = stk_sampcrit_eqi (stk_model ()); ***** assert (F.current_minimum == +inf); ***** error feval (F, 1.0); ***** shared F, M M = stk_model_gpposterior (stk_model (), [1 2 3]', [1.234 3 2]'); warning: Something went wrong during the optimization crit0 = 2.594852, crit_opt = 2.594852: crit0 < crit_opt ***** error F = stk_sampcrit_eqi (M, [], 0); ***** error F = stk_sampcrit_eqi (M, [], 1.5); ***** error F = stk_sampcrit_eqi (M, [], nan); ***** error F = stk_sampcrit_eqi (M, [], [10 20]); ***** test F = stk_sampcrit_eqi (M, [], 10); ***** assert (isequal (F.quantile_order, 0.5)); ***** assert (isequal (F.point_batch_size, 10)); ***** error F = stk_sampcrit_eqi (M, 0.8, 0); ***** error F = stk_sampcrit_eqi (M, 0.8, 1.5); ***** error F = stk_sampcrit_eqi (M, 0.8, nan); ***** error F = stk_sampcrit_eqi (M, 0.8, [10 20]); ***** test F = stk_sampcrit_eqi (M, 0.8, 5); ***** assert (isequal (F.quantile_order, 0.8)); ***** assert (isequal (F.point_batch_size, 5)); ***** shared F, M, EQI prior_model = stk_model (); prior_model.lognoisevariance = 0.678; M = stk_model_gpposterior (prior_model, [1 2 3]', [1.234 3 2]'); F = stk_sampcrit_eqi (M); ***** test F.point_batch_size = 10; % numeric ***** assert (isequal (F.point_batch_size, 10)) ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** test F.point_batch_size = @(x, n) 100 - n; % function handle ***** assert (isa (F.point_batch_size, 'function_handle')) ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** test F.point_batch_size = 'sin'; % char ***** assert (isa (F.point_batch_size, 'function_handle')) 63 tests, 63 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_ei/stk_sampcrit_ei.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/@stk_sampcrit_ei/stk_sampcrit_ei.m ***** shared F, M, EI M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); warning: Something went wrong during the optimization crit0 = 2.594852, crit_opt = 2.594852: crit0 < crit_opt ***** test F = stk_sampcrit_ei () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | current_minimum: Inf | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (F.current_minimum == +inf) ***** assert (get (F, 'current_minimum') == +inf) ***** error F.toto ***** error get (F, 'toto') ***** error F.current_min = 1.234; % read-only ***** error F = set (F, 'current_min', 1.234); % read-only ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** error EI = feval (F, 1.0); ***** test F = stk_sampcrit_ei (); F.model = M; assert (~ isempty (F.model)); ***** test F = stk_sampcrit_ei (); F = set (F, 'model', M); assert (~ isempty (F.model)); ***** test F.model = []; % remove model assert (isempty (F.model)); assert (F.current_minimum == +inf); ***** test F = stk_sampcrit_ei (M) % ending ";" omitted on purpose, to test disp F = | | model: | current_minimum: 1.234 | ***** assert (isequal (F.model, M)) ***** assert (F.current_minimum == 1.234); ***** test EI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EI), [3 1])) ***** assert (all (EI >= 0)) ***** shared F ***** test F = stk_sampcrit_ei (stk_model ()); ***** assert (F.current_minimum == +inf); ***** error feval (F, 1.0); 24 tests, 24 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_akg/stk_sampcrit_akg.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/@stk_sampcrit_akg/stk_sampcrit_akg.m ***** shared F, M, AKG M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); warning: Something went wrong during the optimization crit0 = 2.594852, crit_opt = 2.594852: crit0 < crit_opt ***** test F = stk_sampcrit_akg () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | reference_grid: -- (use current evaluation points) | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (isempty (F.reference_grid)) ***** assert (isempty (get (F, 'reference_grid'))) ***** error F.toto ***** error get (F, 'toto') ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** error AKG = feval (F, 1.0); ***** test F = stk_sampcrit_akg (); F.model = M; assert (isequal (F.model, M)); ***** test F = stk_sampcrit_akg (); F = set (F, 'model', M); assert (isequal (F.model, M)); assert (isequal (size (F.zr_mean), [3 1])) % n x 1 assert (isequal (size (F.zr_std), [3 1])) % n x 1 assert (isequal (size (F.zr_lambdamu), [4 3])) % (n+1) x n (constant mean) ***** test F.model = []; % remove model assert (isempty (F.model)); assert (isempty (F.zr_mean)) assert (isempty (F.zr_std)) assert (isempty (F.zr_lambdamu)) ***** test xr = [1 1.5 2 2.5 3]'; F.reference_grid = xr % ending ";" omitted on purpose, to test disp assert (isequal (F.reference_grid, xr)) assert (isempty (F.zr_mean)) assert (isempty (F.zr_std)) assert (isempty (F.zr_lambdamu)) F = | | model: -- (not instantiated) | reference_grid: <5x1 double array> | ***** test F.reference_grid = []; assert (isempty (F.reference_grid)) ***** test F = stk_sampcrit_akg (); F.model = M; assert (isequal (F.model, M)); xr = [1 1.5 2 2.5 3]'; F.reference_grid = xr % ending ";" omitted on purpose, to test disp assert (isequal (F.reference_grid, xr)) assert (isequal (size (F.zr_mean), [5 1])) % nr x 1 assert (isequal (size (F.zr_std), [5 1])) % nr x 1 assert (isequal (size (F.zr_lambdamu), [4 5])) % (n+1) x nr (constant mean) F = | | model: | reference_grid: <5x1 double array> | ***** test F.reference_grid = []; assert (isempty (F.reference_grid)) ***** test F = stk_sampcrit_akg (M) % ending ";" omitted on purpose, to test disp F = | | model: | reference_grid: -- (use current evaluation points) | ***** assert (isequal (F.model, M)) ***** test AKG = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (AKG), [3 1])) ***** assert (all (AKG >= 0)) ***** test [AKG2, zp] = feval (F, [1.0; 1.1; 1.2]); assert (isequal (AKG2, AKG)); assert (isa (zp, 'stk_dataframe') && isequal (size (zp), [3 2])) ***** shared F, xr xr = [1 1.5 2 2.5 3]'; ***** test F = stk_sampcrit_akg (stk_model ()); ***** assert (isempty (F.reference_grid)) ***** test F.reference_grid = xr; ***** assert (isequal (F.reference_grid, xr)) ***** assert (isempty (F.zr_mean)) ***** assert (isempty (F.zr_std)) ***** assert (isempty (F.zr_lambdamu)) ***** error AKG = feval (F, 1.0); ***** shared F, M, xr xr = [1 1.5 2 2.5 3]'; M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); warning: Something went wrong during the optimization crit0 = 2.594852, crit_opt = 2.594852: crit0 < crit_opt ***** test F = stk_sampcrit_akg (M, xr); ***** assert (isequal (F.model, M)) ***** assert (isequal (F.reference_grid, xr)) ***** assert (isequal (size (F.zr_mean), [5 1])) % nr x 1 ***** assert (isequal (size (F.zr_std), [5 1])) % nr x 1 ***** assert (isequal (size (F.zr_lambdamu), [4 5])) % (n+1) x nr (constant mean) 37 tests, 37 passed, 0 known failure, 0 skipped [inst/sampling/@stk_function/stk_function.m] >>>>> /build/octave-stk-2.7.0/inst/sampling/@stk_function/stk_function.m ***** shared F ***** test F = stk_function () % ending ";" omitted on purpose, to test disp F = ***** error [F F]; % arrays of sampling criterion objects are not supported ***** error [F; F]; % idem ***** error get (F, 'toto'); % field does not exist ***** error y = feval (F, 1.0); % not implemented for "pure" function objects ***** error dummy = F{2}; % illegal indexing ***** error dummy = F(1.0); % feval not implemented ***** error dummy = F.toto; % field does not exist ***** error F{2} = 1.234; % illegal indexing ***** error F(5) = 1.234; % illegal indexing ***** error F.toto = 1.234; % field does not exist 11 tests, 11 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_init.m] >>>>> /build/octave-stk-2.7.0/inst/param/estim/stk_param_init.m ***** test xi = (1:10)'; zi = sin (xi); model = stk_model (@stk_materncov52_iso); model.param = stk_param_init (model, xi, zi, [1; 10], false); xt = (1:9)' + 0.5; zt = sin (xt); zp = stk_predict (model, xi, zi, xt); assert (sum ((zt - zp.mean) .^ 2) < 1e-3); ***** test % check equivariance of parameter estimates f = @(x) sin (x); xi = stk_sampling_regulargrid (10, 1); zi = stk_feval (f, xi); shift = 1000; scale = 0.01; model = stk_model (@stk_materncov32_iso); p1 = stk_param_init (model, xi, zi); p2 = stk_param_init (model, xi, shift + scale .* zi); assert (stk_isequal_tolabs (p2(1), p1(1) + log (scale^2), 1e-10)) assert (stk_isequal_tolabs (p2(2), p1(2), eps)) ***** shared xi, zi, BOX, xt, zt f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); DIM = 1; % Dimension of the factor space BOX = [-1.0; 1.0]; % Factor space xi = stk_sampling_regulargrid (20, DIM, BOX); % Evaluation points zi = stk_feval (f, xi); % Evaluation results NT = 400; % Number of points in the grid xt = stk_sampling_regulargrid (NT, DIM, BOX); % Generate a regular grid zt = stk_feval (f, xt); % Values of f on the grid ***** xtest % This test is known to fail in Debian buster i386 % because of a known problem in Octave's sqp/qp functions % http://savannah.gnu.org/bugs/?38875 model = stk_model (@stk_materncov_iso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_materncov_aniso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_materncov32_iso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_materncov32_aniso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_materncov52_iso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_materncov52_aniso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model (@stk_gausscov_iso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: matrix singular to machine precision, rcond = 1.21281e-17 warning: called from linsolve at line 113 column 7 linsolve at line 42 column 3 stk_set_righthandside at line 44 column 16 stk_make_kreq at line 35 column 6 stk_predict_ at line 112 column 10 stk_predict at line 104 column 16 __test__ at line 6 column 5 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 166 column 31 ***** test model = stk_model (@stk_gausscov_aniso); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: matrix singular to machine precision, rcond = 3.93346e-18 warning: called from linsolve at line 113 column 7 linsolve at line 42 column 3 stk_set_righthandside at line 44 column 16 stk_make_kreq at line 35 column 6 stk_predict_ at line 112 column 10 stk_predict at line 104 column 16 __test__ at line 6 column 5 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 166 column 31 ***** test % Homoscedastic case / do_estim_lnv = true model = stk_model (@stk_materncov32_iso); [model.param, model.lognoisevariance] = ... stk_param_init (model, xi, zi, BOX, true); [model.param, model.lognoisevariance] = ... stk_param_estim (model, xi, zi); zp = stk_predict (model, xi, zi, xt); assert (model.lognoisevariance > -inf); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: This way of setting do_estim_lnv is deprecated warning: called from stk_param_init>stk_param_init_ at line 250 column 5 stk_param_init at line 87 column 18 __test__ at line 4 column 40 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 166 column 31 ***** error % Homoscedastic case / do_estim_lnv = false / model.lnv = nan model = stk_model (@stk_materncov32_iso); model.lognoisevariance = nan; % not compatible with do_estim_lnv == false [model.param, model.lognoisevariance] = ... stk_param_init (model, xi, zi, BOX, false); ***** test % Heteroscedastic case / known noise variance model = stk_model (@stk_materncov32_iso); lnv = log ((100 + rand (size (zi))) / 1e6); model.lognoisevariance = lnv; % here we say that lnv is known [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (isequal (model.lognoisevariance, lnv)); % should be untouched assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** shared model, x, z model = stk_model (@stk_materncov52_iso); n = 10; x = stk_sampling_regulargrid (n, 1, [0; 1]); z = ones (size (x)); ***** test % Constant response, noiseless model [param, lnv] = stk_param_init (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); assert (isequal (lnv, -inf)); warning: Parameter estimation is impossible with constant-response data. warning: called from stk_param_init>paraminit_ at line 351 column 5 stk_param_init>stk_param_init_ at line 323 column 14 stk_param_init at line 87 column 18 __test__ at line 3 column 15 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 166 column 31 ***** test % Constant response, noisy model model.lognoisevariance = nan; [param, lnv] = stk_param_init (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); assert (isscalar (lnv) && isfinite (lnv)); warning: Parameter estimation is impossible with constant-response data. warning: called from stk_param_init>paraminit_ at line 351 column 5 stk_param_init>stk_param_init_ at line 323 column 14 stk_param_init at line 87 column 18 __test__ at line 4 column 15 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 166 column 31 15 tests, 15 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_relik.m] >>>>> /build/octave-stk-2.7.0/inst/param/estim/stk_param_relik.m ***** shared f, xi, zi, NI, model, C, dC1, dC2 f = @(x)(- (0.8 * x(:, 1) + sin (5 * x(:, 2) + 1) ... + 0.1 * sin (10 * x(:, 3)))); DIM = 3; NI = 20; box = repmat ([-1.0; 1.0], 1, DIM); xi = stk_sampling_halton_rr2 (NI, DIM, box); zi = stk_feval (f, xi); SIGMA2 = 1.0; % variance parameter NU = 4.0; % regularity parameter RHO1 = 0.4; % scale (range) parameter model = stk_model (@stk_materncov_aniso); model.param = log ([SIGMA2; NU; 1/RHO1 * ones(DIM, 1)]); ***** error [C, dC1, dC2] = stk_param_relik (); ***** error [C, dC1, dC2] = stk_param_relik (model); ***** error [C, dC1, dC2] = stk_param_relik (model, xi); ***** test [C, dC1, dC2] = stk_param_relik (model, xi, zi); ***** test TOL_REL = 0.01; assert (stk_isequal_tolrel (C, 21.6, TOL_REL)); assert (stk_isequal_tolrel (dC1, [4.387 -0.1803 0.7917 0.1392 2.580]', TOL_REL)); assert (isequal (dC2, [])); ***** shared xi, zi, model, TOL_REL xi = [-1 -.6 -.2 .2 .6 1]'; zi = [-0.11 1.30 0.23 -1.14 0.36 -0.37]'; model = stk_model (@stk_materncov_iso); model.param = log ([1.0 4.0 2.5]); model.lognoisevariance = log (0.01); TOL_REL = 0.01; ***** test % Another simple 1D check [C, dC1, dC2] = stk_param_relik (model, xi, zi); assert (stk_isequal_tolrel (C, 6.327, TOL_REL)); assert (stk_isequal_tolrel (dC1, [0.268 0.0149 -0.636]', TOL_REL)); assert (stk_isequal_tolrel (dC2, -1.581e-04, TOL_REL)); ***** test % Same 1D test with simple kriging model.lm = stk_lm_null; [C, dC1, dC2] = stk_param_relik (model, xi, zi); assert (stk_isequal_tolrel (C, 7.475, TOL_REL)); assert (stk_isequal_tolrel (dC1, [0.765 0.0238 -1.019]', TOL_REL)); assert (stk_isequal_tolrel (dC2, 3.0517e-03, TOL_REL)); ***** test % Check the gradient on a 2D test case f = @stk_testfun_braninhoo; DIM = 2; BOX = [[-5; 10], [0; 15]]; NI = 20; TOL_REL = 1e-2; DELTA = 1e-6; model = stk_model (@stk_materncov52_iso, DIM); model.param = [1 1]; xi = stk_sampling_halton_rr2 (NI, DIM, BOX); zi = stk_feval (f, xi); for range = [0.3 2 10] model.param(2) = - log (range); for diff = 1:2 assert (stk_test_critgrad ... (@stk_param_relik, model, xi, zi, diff, 1e-6)); end end 8 tests, 8 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_init_lnv.m] >>>>> /build/octave-stk-2.7.0/inst/param/estim/stk_param_init_lnv.m ***** test f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); ni = 20; xi = (linspace (-1, 1, ni))' + 0.2 * (randn (ni, 1)); zi = stk_feval (f, xi); model = stk_model (@stk_materncov_iso); model.param = log ([1; 5/2; 1/0.4]); model.lognoisevariance = nan; lnv = stk_param_init_lnv (model, xi, zi); assert ((isscalar (lnv)) && (lnv > -30) && (lnv < 30)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_gls.m] >>>>> /build/octave-stk-2.7.0/inst/param/estim/stk_param_gls.m ***** shared xi, zi, model, beta, sigma2 xi = (1:10)'; zi = sin (xi); model = stk_model (@stk_materncov52_iso); model.param = [0.0 0.0]; ***** test model.lm = stk_lm_constant (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (stk_isequal_tolabs (beta, 0.1346064, 1e-6)) ***** assert (stk_isequal_tolabs (sigma2, 0.4295288, 1e-6)) ***** test model.lm = stk_lm_affine (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (stk_isequal_tolabs (beta, [0.4728342; -0.0614960], 1e-6)) ***** assert (stk_isequal_tolabs (sigma2, 0.4559431, 1e-6)) ***** test model.lm = stk_lm_null (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (isequal (beta, zeros (0, 1))) ***** assert (stk_isequal_tolabs (sigma2, 0.3977993, 1e-6)) 9 tests, 9 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_estim.m] >>>>> /build/octave-stk-2.7.0/inst/param/estim/stk_param_estim.m ***** shared f, xi, zi, NI, param0, param1, model f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x)) ); DIM = 1; NI = 20; box = [-1.0; 1.0]; xi = stk_sampling_regulargrid (NI, DIM, box); SIGMA2 = 1.0; % variance parameter NU = 4.0; % regularity parameter RHO1 = 0.4; % scale (range) parameter param0 = log ([SIGMA2; NU; 1/RHO1]); model = stk_model (@stk_materncov_iso); ***** test % noiseless zi = stk_feval (f, xi); param1 = stk_param_estim (model, xi, zi, param0); assert (isequal (size (param1), size (param0))) ***** test % same thing, with empty lnv0 (ok) param2 = stk_param_estim (model, xi, zi, param0, []); assert (stk_isequal_tolrel (param2, param1, 1e-2)) ***** error % same thing, with lnv0 == NaN (not ok as a starting point) param2 = stk_param_estim (model, xi, zi, param0, nan); ***** error % same thing, with lnv0 == -inf (not ok as a starting point) param2 = stk_param_estim (model, xi, zi, param0, -inf); ***** test % same thing, with explicit value for 'criterion' param2 = stk_param_estim (model, xi, zi, param0, [], @stk_param_relik); assert (stk_isequal_tolrel (param1, param2, 1e-2)) ***** test % noiseless zi = stk_feval (f, xi); param1 = stk_param_estim (model, xi, zi, param0); param2 = stk_param_estim (model, xi, zi, param0, [], @stk_param_relik); % We cannot assume a DETERMINISTIC optimization algorithm % (for some reason, Octave's sqp is not exactly deterministic) assert (stk_isequal_tolrel (param1, param2, 1e-2)) ***** test % noisy NOISE_STD_TRUE = 0.1; NOISE_STD_INIT = 1e-5; zi = zi + NOISE_STD_TRUE * randn(NI, 1); model.lognoisevariance = 2 * log(NOISE_STD_INIT); [param, lnv] = stk_param_estim ... (model, xi, zi, param0, model.lognoisevariance); ***** error param = stk_param_estim () ***** error param = stk_param_estim (model); ***** error param = stk_param_estim (model, xi); ***** test % Constant response model = stk_model (@stk_materncov52_iso); n = 10; x = stk_sampling_regulargrid (n, 1, [0; 1]); z = ones (size (x)); param = stk_param_estim (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); warning: Constant-response data: the output of stk_param_estim is likely to be unreliable. warning: called from stk_param_estim at line 95 column 5 __test__ at line 5 column 8 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 198 column 31 warning: Parameter estimation is impossible with constant-response data. warning: called from stk_param_init>paraminit_ at line 351 column 5 stk_param_init>stk_param_init_ at line 323 column 14 stk_param_init at line 87 column 18 stk_param_estim>provide_starting_point at line 205 column 20 stk_param_estim at line 110 column 30 __test__ at line 5 column 8 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 198 column 31 11 tests, 11 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_ortho_func.m] >>>>> /build/octave-stk-2.7.0/inst/model/prior_struct/stk_ortho_func.m ***** shared model, x, n, d n = 15; d = 4; model = stk_model (@stk_materncov_aniso, d); x = stk_sampling_randunif (n, d); model = rmfield (model, 'lm'); % Test the old .order approach ***** error P = stk_ortho_func (); ***** error P = stk_ortho_func (model); ***** test P = stk_ortho_func (model, x); ***** test model.order = -1; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 0])); ***** test model.order = 0; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1])); ***** test model.order = 1; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, d + 1])); ***** test model.order = 2; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1 + d * (d + 3) / 2])); ***** test model.order = 3; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1 + d * (11 + d * (6 + d)) / 6])); ***** error model.order = 4; P = stk_ortho_func (model, x); % model.order > 3 is not allowed 9 tests, 9 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_model.m] >>>>> /build/octave-stk-2.7.0/inst/model/prior_struct/stk_model.m ***** test model = stk_model (); ***** test model = stk_model (@stk_expcov_iso); ***** test model = stk_model (@stk_expcov_iso, 1); ***** test model = stk_model (@stk_expcov_iso, 3); ***** test model = stk_model (@stk_expcov_aniso); ***** test model = stk_model (@stk_expcov_aniso, 1); ***** test model = stk_model (@stk_expcov_aniso, 3); ***** test model = stk_model (@stk_materncov_iso); ***** test model = stk_model (@stk_materncov_iso, 1); ***** test model = stk_model (@stk_materncov_iso, 3); ***** test model = stk_model (@stk_materncov_aniso); ***** test model = stk_model (@stk_materncov_aniso, 1); ***** test model = stk_model (@stk_materncov_aniso, 3); ***** test model = stk_model (@stk_materncov32_iso); ***** test model = stk_model (@stk_materncov32_iso, 1); ***** test model = stk_model (@stk_materncov32_iso, 3); ***** test model = stk_model (@stk_materncov32_aniso); ***** test model = stk_model (@stk_materncov32_aniso, 1); ***** test model = stk_model (@stk_materncov32_aniso, 3); ***** test model = stk_model (@stk_materncov52_iso); ***** test model = stk_model (@stk_materncov52_iso, 1); ***** test model = stk_model (@stk_materncov52_iso, 3); ***** test model = stk_model (@stk_materncov52_aniso); ***** test model = stk_model (@stk_materncov52_aniso, 1); ***** test model = stk_model (@stk_materncov52_aniso, 3); ***** test model = stk_model (@stk_gausscov_iso); ***** test model = stk_model (@stk_gausscov_iso, 1); ***** test model = stk_model (@stk_gausscov_iso, 3); ***** test model = stk_model (@stk_gausscov_aniso); ***** test model = stk_model (@stk_gausscov_aniso, 1); ***** test model = stk_model (@stk_gausscov_aniso, 3); ***** test model = stk_model (@stk_sphcov_iso); ***** test model = stk_model (@stk_sphcov_iso, 1); ***** test model = stk_model (@stk_sphcov_iso, 3); ***** test model = stk_model (@stk_sphcov_aniso); ***** test model = stk_model (@stk_sphcov_aniso, 1); ***** test model = stk_model (@stk_sphcov_aniso, 3); 37 tests, 37 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_covmat_noise.m] >>>>> /build/octave-stk-2.7.0/inst/model/prior_struct/stk_covmat_noise.m ***** shared model, model2, x1, x2, n1, n2, d, Ka, Kb, Kc, Pa, Pb, Pc, P1, P2, P3, K1, K2, K3 n1 = 20; n2 = 10; d = 4; model = stk_model (@stk_materncov52_aniso, d); model.lm = stk_lm_affine; model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); model2 = model; model2.lognoisevariance = log(0.01); x1 = stk_sampling_randunif (n1, d); x2 = stk_sampling_randunif (n2, d); ***** error [KK, PP] = stk_covmat_noise (); ***** error [KK, PP] = stk_covmat_noise (model); ***** test [Ka, Pa] = stk_covmat_noise (model, x1); % (1) ***** test [K1, P1] = stk_covmat_noise (model, x1, []); ***** test [K2, P2] = stk_covmat_noise (model, x1, [], -1); ***** test [K3, P3] = stk_covmat_noise (model, x1, [], -1, false); ***** assert (isequal (size (Ka), [n1 n1])); ***** assert (isequal (size (Pa), [n1 0])); ***** assert (isequal (P1, Pa) && (isequal (K1, Ka))) ***** assert (isequal (P2, Pa) && (isequal (K2, Ka))) ***** assert (isequal (P3, Pa) && (isequal (K3, Ka))) ***** test [Kb, Pb] = stk_covmat_noise (model, x1, x1); % (2) ***** test [K1, P1] = stk_covmat_noise (model, x1, x1, -1); ***** test [K2, P2] = stk_covmat_noise (model, x1, x1, -1, false); ***** assert (isequal (size (Kb), [n1 n1])); ***** assert (isequal (size (Pb), [n1 0])); ***** assert (isequal (P1, Pb) && (isequal (K1, Kb))) ***** assert (isequal (P2, Pb) && (isequal (K2, Kb))) ***** test [Kc, Pc] = stk_covmat_noise (model, x1, x2); % (3) ***** test [K1, P1] = stk_covmat_noise (model, x1, x2, -1); ***** test [K2, P2] = stk_covmat_noise (model, x1, x2, -1, false); ***** assert (isequal (size (Kc), [n1 n2])); ***** assert (isequal (size (Pc), [n1 0])); ***** assert (isequal (P1, Pc) && (isequal (K1, Kc))) ***** assert (isequal (P2, Pc) && (isequal (K2, Kc))) ***** assert (isequal (Kb, Ka)); ***** test [Ka, Pa] = stk_covmat_noise (model2, x1); % (1') ***** test [Kb, Pb] = stk_covmat_noise (model2, x1, x1); % (2') ***** error assert (isequal (Kb, Ka)); ***** assert (isequal (Pa, Pb)); ***** assert (isequal (Pa, Pc)); 31 tests, 31 passed, 0 known failure, 0 skipped [inst/model/noise/@stk_gaussiannoise_het0/set.m] >>>>> /build/octave-stk-2.7.0/inst/model/noise/@stk_gaussiannoise_het0/set.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_predict_leaveoneout.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/stk_predict_leaveoneout.m ***** test % Check virtual Leave-One-Out formula n = 20; d = 1; x_obs = stk_sampling_regulargrid (n, d, [0; 2*pi]); z_obs = stk_feval (@sin, x_obs); lm_list = {stk_lm_null, stk_lm_constant, stk_lm_affine}; for j = 0:2 for k = 1:(length (lm_list)) model = stk_model (@stk_materncov32_iso, d); model.lm = lm_list{k}; model.param = log ([1; 5]); switch j % test various scenarios for lognoisevariance case 0 model.lognoisevariance = -inf; case 1 model.lognoisevariance = 0; case 2 model.lognoisevariance = (1 + rand (n, 1)) * 1e-3; end M_post = stk_model_gpposterior (model, x_obs, z_obs); [loo_pred, loo_res] = stk_predict_leaveoneout (M_post); [direct_pred, direct_res] = stk_predict_leaveoneout_direct (M_post); assert (stk_isequal_tolrel (loo_pred, direct_pred)); assert (stk_isequal_tolrel (loo_res, direct_res)); end end 1 test, 1 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_predict_.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/stk_predict_.m ***** shared n, m, M_post, M_prior, x0, x_obs, z_obs, x_prd, y_prd, idx_obs, idx_prd n = 10; % number of observations m = n + 1; % number of predictions d = 1; % dimension of the input space x0 = (linspace (0, pi, n + m))'; idx_obs = (2:2:(n+m-1))'; idx_prd = (1:2:(n+m))'; x_obs = x0(idx_obs); z_obs = sin (x_obs); x_prd = x0(idx_prd); M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error y_prd = stk_predict (M_post); ***** test y_prd = stk_predict (M_post, x_prd); ***** error y_prd = stk_predict (M_post, [x_prd x_prd]); ***** test % nargout = 2 [y_prd1, lambda] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); ***** test % nargout = 3 [y_prd1, lambda, mu] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging ***** test % nargout = 4 [y_prd1, lambda, mu, K] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging assert (isequal (size (K), [m m])); ***** test % nargout = 2, compute only variances M_post1 = stk_model_gpposterior (M_prior, x_obs, []); [y_prd_nan, lambda] = stk_predict (M_post1, x_prd); assert (isequal (size (lambda), [n m])); assert (all (isnan (y_prd_nan.mean))); ***** test % discrete model (prediction indices provided) M_prior1 = stk_model (@stk_discretecov, M_prior, x0); M_post1 = stk_model_gpposterior (M_prior1, idx_obs, z_obs); y_prd1 = stk_predict (M_post1, idx_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); ***** test % discrete model (prediction indices *not* provided) M_prior1 = stk_model (@stk_discretecov, M_prior, x0); M_post1 = stk_model_gpposterior (M_prior1, idx_obs, z_obs); y_prd1 = stk_predict (M_post1, []); % predict them all! assert (stk_isequal_tolrel (y_prd, y_prd1(idx_prd, :))); 9 tests, 9 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_model_update.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/stk_model_update.m ***** shared x_obs, z_obs, ref, M_prior, x_new, z_new, lnv_new [x_obs, z_obs, ref] = stk_dataset_twobumps ('noisy2'); M_prior = stk_model (@stk_materncov52_iso); M_prior.param = [-0.15; 0.38]; M_prior.lognoisevariance = 2 * log (ref.noise_std); x_new = [-0.79; -0.79]; z_new = [-0.69; -0.85]; lnv_new = ref.noise_std_func (x_new); ***** test % heteroscedastic M_prior.lognoisevariance = 2 * log (ref.noise_std); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new, lnv_new); ***** error % using lnv_new / homoscedastic M_prior.lognoisevariance = 0; M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new, lnv_new); % NOT OK ***** error % using lnv_new / noiseless M_prior.lognoisevariance = -inf; M_post = stk_model_gpposterior (M_prior, x_obs, z_obs) M_post = stk_model_update (M_post, x_new, z_new, lnv_new); % NOT OK ***** error % not using lnv_new / heteroscedastic M_prior.lognoisevariance = 2 * log (ref.noise_std); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_model_gpposterior.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/stk_model_gpposterior.m ***** test stk_test_class ('stk_model_gpposterior') ***** shared M_prior, x_obs, z_obs x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); ***** test M_post = stk_model_gpposterior (); ***** test M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error M_post = stk_model_gpposterior (M_prior, x_obs, [z_obs; z_obs]); ***** error M_post = stk_model_gpposterior (M_prior, x_obs, [z_obs; z_obs], 3.441); ***** test % hidden feature kreq = stk_kreq_qr (M_prior, x_obs); M_post = stk_model_gpposterior (M_prior, {x_obs, kreq}, z_obs); ***** test % NaNs in prior_model.param DIM = 1; M = stk_model (@stk_materncov52_aniso, DIM); M.param = nan (2, 1); % this is currently the default x = stk_sampling_regulargrid (20, DIM, [0; 1]); y = sin (double (x)); zp = stk_predict (M, x, y, x); 7 tests, 7 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/set.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/set.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/get.m] >>>>> /build/octave-stk-2.7.0/inst/model/@stk_model_gpposterior/get.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model (@stk_materncov32_iso); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect_scientific.m] >>>>> /build/octave-stk-2.7.0/inst/misc/text/stk_sprintf_colvect_scientific.m ***** shared x, s x = [1.2; -34567]; ***** test s = stk_sprintf_colvect_scientific(x, 1); ***** assert (isequal(s, ['#'; '#'])) ***** test s = stk_sprintf_colvect_scientific(x, 3); ***** assert (isequal(s, ['###'; '###'])) ***** test s = stk_sprintf_colvect_scientific(x, 5); ***** assert (isequal(s, ['#####'; '#####'])) ***** test s = stk_sprintf_colvect_scientific(x, 6); ***** assert (isequal(s, [' 1e+00'; '-3e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 7); ***** assert (isequal(s, [' 1e+00'; '-3e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 8); ***** assert (isequal(s, [' 1.2e+00'; '-3.5e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 9); ***** assert (isequal(s, [' 1.20e+00'; '-3.46e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 10); ***** assert (isequal(s, [' 1.200e+00'; '-3.457e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 11); ***** assert (isequal(s, [' 1.2000e+00'; '-3.4567e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 12); ***** assert (isequal(s, [' 1.2000e+00'; '-3.4567e+04'])) ***** shared x, s x = [0.9; 0.91; 0.99; 0.999]; ***** test s = stk_sprintf_colvect_scientific (x, 4); ***** assert (isequal(s, ['####'; '####'; '####'; '####'])) ***** test s = stk_sprintf_colvect_scientific (x, 5); ***** assert (isequal(s, ['9e-01'; '9e-01'; '1e+00'; '1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 6); ***** assert (isequal(s, ['9e-01'; '9e-01'; '1e+00'; '1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 7); ***** assert (isequal(s, ['9.0e-01'; '9.1e-01'; '9.9e-01'; '1.0e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 8); ***** assert (isequal(s, ['9.00e-01'; '9.10e-01'; '9.90e-01'; '9.99e-01'])) ***** shared x, s x = [0.9; -0.91; 0.99; 0.999]; ***** test s = stk_sprintf_colvect_scientific (x, 4); ***** assert (isequal(s, ['####'; '####'; '####'; '####'])) ***** test s = stk_sprintf_colvect_scientific (x, 5); ***** assert (isequal(s, ['#####'; '#####'; '#####'; '#####'])) ***** test s = stk_sprintf_colvect_scientific (x, 6); ***** assert (isequal(s, [' 9e-01'; '-9e-01'; ' 1e+00'; ' 1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 7); ***** assert (isequal(s, [' 9e-01'; '-9e-01'; ' 1e+00'; ' 1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 8); ***** assert (isequal(s, [' 9.0e-01'; '-9.1e-01'; ' 9.9e-01'; ' 1.0e+00'])) ***** test x = [1e6; -1e10; 1e-221]; s = stk_sprintf_colvect_scientific(x, 10); assert(isequal(s, [' 1e+006'; '-1e+010'; ' 1e-221'])); 41 tests, 41 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect_fixedpoint.m] >>>>> /build/octave-stk-2.7.0/inst/misc/text/stk_sprintf_colvect_fixedpoint.m ***** shared x, s x = [1.2; 3.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['1'; '3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, ['1'; '3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, ['1.2'; '3.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, ['1.20'; '3.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, ['1.20'; '3.48'])) ***** shared x, s x = [1.2; -3.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['#'; '#'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, [' 1'; '-3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, [' 1'; '-3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, [' 1.2'; '-3.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, [' 1.20'; '-3.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 6); ***** assert (isequal(s, [' 1.20'; '-3.48'])) ***** shared x, s x = [0.2; 0.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['0'; '0'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, ['0'; '0'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, ['0.2'; '0.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, ['0.20'; '0.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, ['0.20'; '0.48'])) 32 tests, 32 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect.m] >>>>> /build/octave-stk-2.7.0/inst/misc/text/stk_sprintf_colvect.m ***** shared s ***** test s = stk_sprintf_colvect ([1 1e1], 6); ***** assert (isequal (s, [' 1'; '10'])) ***** test s = stk_sprintf_colvect ([1 1e3], 6); ***** assert (isequal (s, [' 1'; '1000'])) ***** test s = stk_sprintf_colvect ([1 1e5], 6); ***** assert (isequal (s, [' 1'; '100000'])) ***** test s = stk_sprintf_colvect ([1 1e6], 6); ***** assert (isequal (s, ['1e+00'; '1e+06'])) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/misc/text/stk_disp_progress.m] >>>>> /build/octave-stk-2.7.0/inst/misc/text/stk_disp_progress.m ***** error stk_disp_progress ('toto ', 0, 1); ***** test stk_disp_progress ('toto ', 1, 1); warning: implicit conversion from numeric to char warning: called from stk_disp_progress at line 53 column 1 __test__ at line 2 column 3 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 310 column 31 toto ***** error stk_disp_progress ('toto ', 2, 1); ***** test stk_disp_progress ('toto ', 1, 2); stk_disp_progress ('toto ', 2, 2); warning: implicit conversion from numeric to char warning: called from stk_disp_progress at line 53 column 1 __test__ at line 3 column 2 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 310 column 31 toto toto 4 tests, 4 passed, 0 known failure, 0 skipped [inst/misc/test/stk_test.m] >>>>> /build/octave-stk-2.7.0/inst/misc/test/stk_test.m ***** assert(isempty([])) % support for test assert shorthand ***** assert((1 + 1) == 2) ***** test a=1; ***** test assert(~exist('a')); ***** shared a % create a shared variable ***** test a = 3; % assign to a shared variable ***** test assert(a == 3); % variable should equal 3 in this second 'test' block ***** shared b, c % replace shared variables {'a'} --> {'b', 'c'} ***** test assert(~exist('a')); % a no longer exists ***** test assert(isempty(b)); % variables start off empty ***** shared a % recreate a shared variable that had been deleted ***** test assert (isempty(a)); % it is empty, even though it was equal to 3 before ***** shared a, b, c % creates three shared variables a = 1; b = 2; c = 3; % give values to all variables, in the same block ***** assert(isequal([a, b, c], [1, 2, 3])); % test all of them together ***** test c=6; % update a value ***** test % show that the update sticks between blocks assert(isequal([a, b, c], [1, 2, 6])); ***** shared % clear all shared variables ***** assert(~exist('a')) % show that they are cleared ***** error test % not enough input arguments ***** error test(1, 2, 3, 4) % too many input args ***** error garbage % usage on nonexistent function should be ***** error stt_test('test', 'bogus'); % undefined function error ***** error stk_test('test', 'bogus'); % error raised by stk_test itself ***** error stk_test(); ***** error stk_test('disp', 'verbose', [], 'extra arg !!!'); ***** error stk_test([]) ***** error stk_test(0.0) ***** error stk_test('stk_mindist', 0.0) ***** error stk_test('stk_mindist', 'dudule') 24 tests, 24 passed, 0 known failure, 0 skipped [inst/misc/test/stk_isequal_tolrel.m] >>>>> /build/octave-stk-2.7.0/inst/misc/test/stk_isequal_tolrel.m ***** shared r1, r2, r3, a, b, tolrel a = 1.01; b = 1.02; tolrel = 0.1; ***** error rr = stk_isequal_tolrel(); ***** error rr = stk_isequal_tolrel(a); ***** test r1 = stk_isequal_tolrel(a, b); ***** test r2 = stk_isequal_tolrel(a, b, tolrel); ***** test r3 = stk_isequal_tolrel(a, [b b]); ***** test assert (isequal (r1, false)); ***** test assert (isequal (r2, true)); ***** test assert (isequal (r3, false)); ***** test a = struct('u', []); b = struct('v', []); assert(~ stk_isequal_tolrel(a, b)) ***** test a = struct('u', 1.01); b = struct('u', 1.02); assert(stk_isequal_tolrel(a, b, tolrel)) 10 tests, 10 passed, 0 known failure, 0 skipped [inst/misc/test/stk_isequal_tolabs.m] >>>>> /build/octave-stk-2.7.0/inst/misc/test/stk_isequal_tolabs.m ***** shared r1, r2, a, b, tolabs a = 1.01; b = 1.02; tolabs = 0.1; ***** error rr = stk_isequal_tolabs(); ***** error rr = stk_isequal_tolabs(a); ***** test r1 = stk_isequal_tolabs(a, b); ***** test r2 = stk_isequal_tolabs(a, b, tolabs); ***** test assert(~r1); ***** test assert(r2); ***** test a = struct('u', []); b = struct('v', []); assert(~ stk_isequal_tolabs(a, b)) ***** test a = struct('u', 1.01); b = struct('u', 1.02); assert(stk_isequal_tolabs(a, b, tolabs)) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_paretofind.m] >>>>> /build/octave-stk-2.7.0/inst/misc/pareto/stk_paretofind.m ***** shared x, ndpos, drank x = [ ... 0 2; ... 2 2; ... ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, 1)); ***** assert (isequal (drank, [0; 1])); ***** shared x, ndpos, drank x = [ ... 3 2; ... 2 2; ... ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, 2)); ***** assert (isequal (drank, [1; 0])); ***** shared x, ndpos, drank x = [ ... 1 0; ... 2 0; ... 0 2; ... 2 2; ... -1 3 ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, [5; 3; 1])); ***** assert (isequal (drank, [0; 3; 0; 2; 0])); ***** shared x, ndpos, drank x = [ ... 1 0; ... 2 0; ... 0 2; ... 2 2; ... -1 3; ... -1 4; ... 2 2 ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, [5; 3; 1])); ***** assert (isequal (drank, [0; 3; 0; 2; 0; 1; 2])); 12 tests, 12 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_isdominated.m] >>>>> /build/octave-stk-2.7.0/inst/misc/pareto/stk_isdominated.m ***** test A = [1 3 2]; B = [0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 1); ***** test A = [1 3 2]; B = [0 0 3]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 0); assert (dpos == 0); ***** test A = [1 3 2]; B = [0 0 0; 0 0 3]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 1); ***** test A = [1 3 2]; B = [0 0 3; 0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 2); ***** test A = [1 3 2; 1 0 1; -1 0 0; 1 3 2]; B = [1 0 0; 0 0 3; 0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isequal (isdom, logical ([1; 1; 0; 1]))); assert (isequal (dpos, [3; 3; 0; 3])); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_dominatedhv.m] >>>>> /build/octave-stk-2.7.0/inst/misc/pareto/stk_dominatedhv.m ***** error hv = stk_dominatedhv (); ***** error hv = stk_dominatedhv (-y, 'incorrect ref type'); ***** error hv = stk_dominatedhv (-y, [0 0]); ***** error hv = stk_dominatedhv (-y, [0 0 0 0 0], 0, 'too many input args'); ***** shared y, hv0 % Example from README.TXT in WFG 1.10 y = [ ... 0.598 0.737 0.131 0.916 6.745; ... 0.263 0.740 0.449 0.753 6.964; ... 0.109 8.483 0.199 0.302 8.872 ]; hv0 = 1.1452351120; ***** test hv = stk_dominatedhv (-y); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test yy = stk_dataframe (- y); % Check that @stk_dataframe inputs are accepted hv = stk_dominatedhv (yy); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (-y, [], 0); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (-y, [0 0 0 0 0]); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (1 - y, [1 1 1 1 1]); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test r = stk_dominatedhv (-y, [], 1); hv = sum (r.sign .* prod (r.xmax - r.xmin, 2)); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** shared y1, y2, y0, S, S1 y0 = [1.00 1.00]; % Reference point y1 = [1.50 1.50]; % Above the reference point y2 = [0.50 0.50]; % Below the reference point ***** assert (isequal (0.00, stk_dominatedhv (y1, y0))); ***** assert (isequal (0.25, stk_dominatedhv (y2, y0))); ***** assert (isequal (0.25, stk_dominatedhv ([y1; y2], y0))); ***** assert (isequal (0.25, stk_dominatedhv ([y2; y1; y2], y0))); ***** test S = stk_dominatedhv (y1, y0, 1); % empty decomposition ***** assert (isequal (size (S.xmin, 1), 0)); ***** test S = stk_dominatedhv (y2, y0, 1); % trivial decomposition ***** assert (isequal (S.sign, 1)); ***** assert (isequal (S.xmin, y2)); ***** assert (isequal (S.xmax, y0)); ***** test S1 = stk_dominatedhv ([y2; y0], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test S1 = stk_dominatedhv ([y2; y1], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test S1 = stk_dominatedhv ([y2; y2], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test for d = 1:10, y = - 0.5 * ones (1, d); hv = stk_dominatedhv (y); assert (isequal (stk_dominatedhv (y), 0.5 ^ d)); end ***** test for d = 1:10, y = - 0.5 * ones (1, d); r = stk_dominatedhv (y, [], 1); hv = sum (r.sign .* prod (r.xmax - r.xmin, 2)); assert (isequal (stk_dominatedhv (y), 0.5 ^ d)); end ***** shared y, y_ref, dv, hv0 y1 = [0.25 0.75]; y2 = [0.50 0.50]; y3 = [0.75 0.25]; y_ref = [1 1]; y = {[], y1, y2, y3; [y1; y2], [y1; y3], [y2; y3], [y1; y2; y3]}; dv = 0.25 ^ 2; hv0 = [0 3 4 3; 5 5 5 6] * dv; ***** test hv1 = stk_dominatedhv (y, y_ref); assert (isequal (hv0, hv1)); ***** test r = stk_dominatedhv (y, y_ref, 1); % Check the first decomposition, which should be empty assert (isempty (r(1).sign)); assert (isempty (r(1).xmin)); assert (isempty (r(1).xmax)); % Check the other decompositions for i = 2:6, hv2 = sum (r(i).sign .* prod (r(i).xmax - r(i).xmin, 2)); assert (isequal (hv0(i), hv2)); end ***** test y = (0.3:0.1:0.8)'; hv0 = 0.7; hv1 = stk_dominatedhv (y, 1); r = stk_dominatedhv (y, 1, true); hv2 = sum (r.sign .* prod (r.xmax - r.xmin, 2)); ***** test % four non-dominated points (hypervolume) zr = [1 1]; zi = [0.2 0.8; 0.4 0.6; 0.6 0.4; 0.8 0.2] P = perms (1:4); for i = 1:24 HV = stk_dominatedhv (zi(P(i, :), :), zr, 0); assert (stk_isequal_tolrel (HV, 0.4, 1e-15)); end zi = 0.2000 0.8000 0.4000 0.6000 0.6000 0.4000 0.8000 0.2000 ***** test % four non-dominated points (decomposition) zr = [1 1]; zi = [0.2 0.8; 0.4 0.6; 0.6 0.4; 0.8 0.2] P = perms (1:4); for i = 1:24 S = stk_dominatedhv (zi(P(i, :), :), zr, 1); HV = sum (S.sign .* prod (S.xmax - S.xmin, 2)); assert (stk_isequal_tolrel (HV, 0.4, 1e-15)); end zi = 0.2000 0.8000 0.4000 0.6000 0.6000 0.4000 0.8000 0.2000 ***** test % a case with 8 points and 5 objectives % http://sourceforge.net/p/kriging/tickets/33 yr = [1.03 0.91 0.96 1.99 16.2]; y = [ ... 0.8180 0.5600 0.1264 1.0755 1.2462; ... 0.8861 0.6928 0.2994 0.7228 0.9848; ... 0.9021 0.8829 0.6060 0.1642 0.4282; ... 0.9116 0.3097 0.8601 0.0468 0.2813; ... 0.9306 0.1429 0.6688 0.1462 1.3661; ... 0.9604 0.3406 0.4046 0.7239 1.8741; ... 0.9648 0.7764 0.5199 0.4098 1.3436; ... 0.9891 0.4518 0.7956 0.1164 1.2025]; hv1 = stk_dominatedhv (y, yr, 0); S = stk_dominatedhv (y, yr, 1); hv2 = sum (S.sign .* prod (S.xmax - S.xmin, 2)); assert (isequal (size (S.sign), [87 1])); assert (isequal (size (S.xmin), [87 5])); assert (isequal (size (S.xmax), [87 5])); assert (stk_isequal_tolrel (hv1, 1.538677420906463, 2 * eps)); assert (stk_isequal_tolrel (hv1, hv2, eps)); ***** test % with random data NREP = 5; for p = 1:5 for n = 1:10 for i = 1:NREP % Draw random data y = rand (n, p); y = - y ./ (norm (y)); % Compute hypervolume directly hv1 = stk_dominatedhv (y, [], 0); % Compute decomposition, then hypervolume R = stk_dominatedhv (y, [], 1); hv2 = sum (R.sign .* prod (R.xmax - R.xmin, 2)); % Compare results assert (stk_isequal_tolabs (hv1, hv2, eps)); end end end 35 tests, 35 passed, 0 known failure, 0 skipped [inst/misc/parallel/@stk_parallel_engine_none/stk_parallel_engine_none.m] >>>>> /build/octave-stk-2.7.0/inst/misc/parallel/@stk_parallel_engine_none/stk_parallel_engine_none.m ***** test stk_test_class ('stk_parallel_engine_none') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_optim_testmin_unc.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/stk_optim_testmin_unc.m ***** shared algo algo = stk_options_get ('stk_param_estim', 'minimize_unc'); ***** error b = stk_optim_testmin_unc (); ***** assert (stk_optim_testmin_unc (algo)); ***** assert (~ stk_optim_testmin_unc ('dudule')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_optim_testmin_box.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/stk_optim_testmin_box.m ***** shared algo algo = stk_options_get ('stk_param_estim', 'minimize_box'); ***** error b = stk_optim_testmin_box (); ***** assert (stk_optim_testmin_box (algo)); ***** assert (~ stk_optim_testmin_box ('dudule')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_minimize_unconstrained.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/stk_minimize_unconstrained.m ***** test % Call fminsearch using function name if stk_optim_isavailable ('fminsearch') assert (stk_optim_testmin_unc ('fminsearch')); end ***** test % Call fminsearch directly, using algorithm object if stk_optim_isavailable ('fminsearch') algo = stk_optim_fminsearch ('TolX', 1e-12, 'TolFun', 1e-12); assert (stk_optim_testmin_unc (algo)); end ***** test % Call sqp using function name if stk_optim_isavailable ('octavesqp') assert (stk_optim_testmin_unc ('octavesqp')); end ***** test % Call sqp directly, using algorithm object if stk_optim_isavailable ('octavesqp') algo = stk_optim_octavesqp (); assert (stk_optim_testmin_unc (algo)); end ***** error assert (stk_optim_testmin_unc ('InexistentOptimizer')); ***** error assert (stk_optim_testmin_unc (100)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_minimize_boxconstrained.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/stk_minimize_boxconstrained.m ***** test % Call fmincon using function name if stk_optim_isavailable ('fmincon') assert (stk_optim_testmin_box ('fmincon')); end ***** test % Call fmincon directly, using algorithm object if stk_optim_isavailable ('fmincon') algo = stk_optim_fmincon ('TolX', 1e-12, 'TolFun', 1e-12); assert (stk_optim_testmin_box (algo)); end ***** test % Call sqp using function name if stk_optim_isavailable ('octavesqp') assert (stk_optim_testmin_box ('octavesqp')); end ***** test % Call sqp directly, using algorithm object if stk_optim_isavailable ('octavesqp') algo = stk_optim_octavesqp (); assert (stk_optim_testmin_box (algo)); end ***** error assert (stk_optim_testmin_box ('InexistentOptimizer')); ***** error assert (stk_optim_testmin_box (100)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_optimizer_/stk_optim_optimizer_.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/@stk_optim_optimizer_/stk_optim_optimizer_.m ***** test stk_test_class ('stk_optim_optimizer_') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_octavesqp/stk_optim_octavesqp.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/@stk_optim_octavesqp/stk_optim_octavesqp.m ***** test stk_test_class ('stk_optim_octavesqp') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_fminsearch/stk_optim_fminsearch.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/@stk_optim_fminsearch/stk_optim_fminsearch.m ***** test stk_test_class ('stk_optim_fminsearch') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_fmincon/stk_optim_fmincon.m] >>>>> /build/octave-stk-2.7.0/inst/misc/optim/@stk_optim_fmincon/stk_optim_fmincon.m ***** test stk_test_class ('stk_optim_fmincon') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/error/stk_error.m] >>>>> /build/octave-stk-2.7.0/inst/misc/error/stk_error.m ***** shared errmsg, mnemonic, badstack errmsg = 'Go ahead, make my day.'; mnemonic = 'ClintEastwood'; badstack = 0; % not a valid stack structure ***** error stk_error(errmsg, mnemonic); ***** error stk_error (errmsg, mnemonic, badstack); ***** error id=STK:stk_error:InvalidArgument stk_error (errmsg, mnemonic, badstack); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_cdf.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_student_cdf.m ***** assert (stk_isequal_tolrel ( ... stk_distrib_student_cdf ([-1; 0; 1], [1 2], 0, [1 10]), ... [0.25, ... % tcdf ((-1 - 0)/1, 1) 4.6473271920707004e-01; ... % tcdf ((-1 - 0)/10, 2) 0.50, ... % tcdf (( 0 - 0)/1, 1) 0.50; ... % tcdf (( 0 - 0)/10, 2) 0.75, ... % tcdf (( 1 - 0)/1, 1) 5.3526728079292996e-01 ... % tcdf (( 1 - 0)/10, 2) ], 4 * eps)) ***** test [p, q] = stk_distrib_student_cdf (1e10, 2); assert (isequal (p, 1.0)); ***** assert (isequal (stk_distrib_student_cdf (0.0, 1), 0.5)); ***** assert (isequal (stk_distrib_student_cdf (inf, 1), 1.0)); ***** assert (isequal (stk_distrib_student_cdf (-inf, 1), 0.0)); ***** assert (isnan (stk_distrib_student_cdf (nan, 1))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_pdf.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_student_pdf.m ***** assert (stk_isequal_tolrel ( ... stk_distrib_student_pdf ([1; 3], [1; 2], [0 1], [1 10]), ... [0.50 / pi ... % tpdf ((1 - 1) / 10, 1) 0.10 / pi; ... % tpdf ((1 - 1) / 10, 1) / 10 1 / (11 * sqrt(11)) ... % tpdf ((3 - 0) / 1, 2) / 1 3.4320590294804165e-02 ... % tpdf ((3 - 1) / 10, 2) / 10 ], eps)); ***** assert (isequal (stk_distrib_student_pdf ( inf, 1.0), 0.0)); ***** assert (isequal (stk_distrib_student_pdf (-inf, 1.0), 0.0)); ***** assert (isnan (stk_distrib_student_pdf ( nan, 1.0))); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_ei.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_student_ei.m ***** assert (stk_isequal_tolrel (stk_distrib_student_ei (0, 2), 1 / sqrt (2), eps)) ***** test % Decreasing as a function of z ei = stk_distrib_student_ei (linspace (-10, 10, 200), 3.33); assert (all (diff (ei) < 0)) ***** shared M, mu, sigma, ei, nu M = randn (1, 10); mu = randn (5, 1); sigma = 1 + rand (1, 1, 7); nu = 2; ei = stk_distrib_student_ei (M, nu, mu, sigma); ***** assert (isequal (size (ei), [5, 10, 7])) ***** assert (all (ei(:) >= 0)) ***** assert (isequal (ei, stk_distrib_student_ei (M, nu, mu, sigma, false))); ***** assert (isequal (ei, stk_distrib_student_ei (-M, nu, -mu, sigma, true))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_pdf.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_normal_pdf.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_pdf ([1; 3], 1, [1 10]), ... [1 / sqrt(2 * pi) ... % normpdf ((1 - 1) / 1) 0.1 / sqrt(2 * pi); ... % normpdf ((1 - 1) / 10) / 10 exp(-2) / sqrt(2 * pi) ... % normpdf ((3 - 1) / 1) 3.910426939754558780e-2 ... % normpdf ((3 - 1) / 10) / 10 ], eps)); ***** assert (isequal (stk_distrib_normal_pdf (inf), 0.0)); ***** assert (isequal (stk_distrib_normal_pdf (-inf), 0.0)); ***** assert (isnan (stk_distrib_normal_pdf (nan))); ***** assert (isnan (stk_distrib_normal_pdf (0, 0, -1))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_ei.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_normal_ei.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_ei (0.0), 1 / sqrt (2 * pi), eps)) ***** test % Decreasing as a function of z ei = stk_distrib_normal_ei (linspace (-10, 10, 200)); assert (all (diff (ei) < 0)) ***** shared M, mu, sigma, ei M = randn (1, 10); mu = randn (5, 1); sigma = 1 + rand (1, 1, 7); ei = stk_distrib_normal_ei (M, mu, sigma); ***** assert (isequal (size (ei), [5, 10, 7])) ***** assert (all (ei(:) >= 0)) ***** assert (isequal (ei, stk_distrib_normal_ei (M, mu, sigma, false))); ***** assert (isequal (ei, stk_distrib_normal_ei (-M, -mu, sigma, true))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_crps.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_normal_crps.m ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (0.0, 0.0, 0.0), 0.0)) ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (0.0, 0.0, 1.0), (sqrt(2) - 1)/sqrt(pi))) ***** shared n, x_obs, mu, sigma, crps, crps_exp x_obs = [ 1.78; -2.29; -1.62; -5.89; 2.88; 0.65; 2.74; -3.42]; % observations mu = [-0.31; -0.59; 1.48; -1.57; -0.05; -0.27; 1.05; 1.27]; % predictions sigma = [ 2.76; 6.80; 1.63; 1.19; 4.98; 9.60; 5.85; 2.24]; % standard dev n = size(x_obs, 1); crps = stk_distrib_normal_crps (x_obs, mu, sigma); ***** assert (isequal (size (crps), [n, 1])) ***** assert (all (crps >= 0)) ***** assert (stk_isequal_tolabs (crps, stk_distrib_normal_crps(mu, x_obs, sigma))) ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (x_obs, mu, 0), abs (x_obs - mu))) crps_ref = [ ... 1.247856605928301 ... 1.757798727719891 ... 2.216236225997414 ... 3.648696666764968 ... 1.832355265287495 ... 2.278618297947438 ... 1.560544734359158 ... 3.455697443411153 ]; assert (stk_isequal_tolabs (crps, crps_ref, 1e-10)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_cdf.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_normal_cdf.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_cdf ([1; 3], 1, [1 10]), ... [0.5, ... % normcdf ((1 - 1) / 1) 0.5; ... % normcdf ((1 - 1) / 10) 0.5 * erfc(-sqrt(2)), ... % normcdf ((3 - 1) / 1) 0.5 * erfc(-0.1*sqrt(2)) ... % normcdf ((3 - 1) / 10) ], eps)); ***** test [p, q] = stk_distrib_normal_cdf (10); assert (isequal (p, 1.0)); assert (stk_isequal_tolrel (q, 7.6198530241604975e-24, eps)); ***** assert (isequal (stk_distrib_normal_cdf ( 0.0), 0.5)); ***** assert (isequal (stk_distrib_normal_cdf ( inf), 1.0)); ***** assert (isequal (stk_distrib_normal_cdf (-inf), 0.0)); ***** assert (isnan (stk_distrib_normal_cdf ( nan))); ***** assert (isnan (stk_distrib_normal_cdf (0, 0, -1))); ***** assert (isequal (stk_distrib_normal_cdf (0, 0, 0), 1.0)); ***** assert (isequal (stk_distrib_normal_cdf (0, 1, 0), 0.0)); ***** assert (isequal (stk_distrib_normal_cdf (1, 0, 0), 1.0)); 10 tests, 10 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_bivnorm_cdf.m] >>>>> /build/octave-stk-2.7.0/inst/misc/distrib/stk_distrib_bivnorm_cdf.m ***** test z1 = [0 1; -1 2]; z2 = [0 1; 1 -2]; z = cat (3, z1, z2); % 2 x 2 x 2 mu1 = 0; % 1 x 1 x 1 mu2 = [0 1]; % 1 x 2 x 1 sigma1 = [1 3]; % 1 x 2 x 1 sigma2 = [1; 2]; % 2 x 1 x 1 rho = [0; 0.5]; % 2 x 1 x 1 %% BROADCASTING => the result will be a 2 x 2 matrix p = stk_distrib_bivnorm_cdf (z, mu1, mu2, sigma1, sigma2, rho); p11 = 0.25; % mvncdf ([ 0 0], [0 0], [1 0; 0 1]); p12 = 0.315279329909118; % mvncdf ([ 1 1], [0 1], [9 0; 0 1]); p21 = 0.146208349559646; % mvncdf ([-1 1], [0 0], [1 1; 1 4]); p22 = 0.064656239880040; % mvncdf ([ 2 -2], [0 1], [9 3; 3 4]); assert (stk_isequal_tolabs (p, [p11 p12; p21 p22], 1e-14)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf -inf], 0, 0, 1, 1, 0); assert ((p == 0.0) && (q == 1.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf -10], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 7.619853024160489e-24, 1e-12)) assert (q == 1.0) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf 0], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 0.5, 1e-12)) assert (stk_isequal_tolrel (q, 0.5, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf 10], 0, 0, 1, 1, 0); assert (p == 1.0); assert (stk_isequal_tolrel (q, 7.619853024160489e-24, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf inf], 0, 0, 1, 1, 0); assert ((p == 1.0) && (q == 0.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([-inf inf], 0, 0, 1, 1, 0); assert ((p == 0.0) && (q == 1.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([-10 inf], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 7.619853024160489e-24, 1e-12)) assert (q == 1.0) ***** test [p, q] = stk_distrib_bivnorm_cdf ([0 inf], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 0.5, 1e-12)) assert (stk_isequal_tolrel (q, 0.5, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([10 inf], 0, 0, 1, 1, 0); assert (p == 1.0); assert (stk_isequal_tolrel (q, 7.619853024160489e-24, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf inf], 0, 0, 1, 1, 0); assert ((p == 1.0) && (q == 0.0)) ***** test % A mixture of singular and non-singular cases p = stk_distrib_bivnorm_cdf ([0 0], 0, 0, [1; 0], 1, 0); assert (isequal (p, [0.25; 0.5])); 12 tests, 12 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_mindist.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_mindist.m ***** test d = 3; x = rand(7, d); md1 = stk_mindist(x); md2 = stk_mindist(stk_dataframe(x)); assert(stk_isequal_tolabs(md1, md2)); ***** test for nc = [0 5 10], x = zeros(0, nc); d = stk_mindist(x); assert(isempty(d)); end ***** test for nc = [0 5 10], x = rand(1, nc); d = stk_mindist(x); assert(isempty(d)); end ***** test for nr = [2 5 10], x = zeros(nr, 0); d = stk_mindist(x); assert(isequal(d, 0.0)); end ***** test nrep = 20; TOL_REL = 1e-15; for irep = 1:nrep, n = 2 + floor(rand * 10); d = 1 + floor(rand * 10); x = rand(n, d); z = stk_mindist(x); assert(isequal(size(d), [1, 1])); assert(~isnan(d)); assert(~isinf(d)); % check the result mindist = Inf; for i = 1:(n-1), for j = (i+1):n, mindist = min(mindist, norm(x(i,:) - x(j,:))); end end assert(abs(z - mindist) <= TOL_REL * mindist); end 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_gpquadform.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_gpquadform.m ***** shared x, y, z, rx, ry, rz x = rand(5, 2); rx = rand(5, 2) + 1; y = rand(6, 2); ry = rand(6, 2) + 1; z = rand(5, 3); rz = rand(5, 3) + 1; ***** error Q = stk_gpquadform(x, ry, y, ry) ***** error Q = stk_gpquadform(x, rz, y, ry) ***** error Q = stk_gpquadform(x, rx, y, rx) ***** error Q = stk_gpquadform(x, rx, y, rz) ***** error Q = stk_gpquadform(x, rx, z, ry) ***** shared x, y, z, rx, ry, rz x = zeros (11, 5); rx = 1/sqrt(2) * ones (11, 5); y = zeros (13, 5); ry = 1/sqrt(2) * ones (13, 5); z = ones ( 7, 5); rz = 1/sqrt(2) * ones ( 7, 5); ***** test Qx = stk_gpquadform(x, [], rx); assert(isequal(Qx, zeros(11))); ***** test Qxx = stk_gpquadform(x, x, rx, rx); assert(isequal(Qxx, zeros(11))); ***** test Qxy = stk_gpquadform(x, y, rx, ry); assert(isequal(Qxy, zeros(11, 13))); ***** test Qzz = stk_gpquadform(z, [], rz); assert(isequal(Qzz, zeros(7))); ***** test Qxz = stk_gpquadform(x, z, rx, rz); assert(stk_isequal_tolabs(Qxz, 5 * ones(11, 7))); ***** test x = randn(5, 3); rx = 1 + rand(5, 3); y = randn(5, 3); ry = 1 + rand(5, 3); Q1 = stk_gpquadform(x, y, rx, ry, true); % pairwise Q2 = stk_gpquadform(x, y, rx, ry, false); assert(isequal(size(Q1), [5 1])); assert(isequal(size(Q2), [5 5])); assert(stk_isequal_tolabs(Q1, diag(Q2))); ***** test x = randn(5, 3); rx = 1 + rand(5, 3); Q1 = stk_gpquadform(x, [], rx, [], true); % pairwise assert(stk_isequal_tolabs(Q1, zeros(5, 1))); Q1 = stk_gpquadform(x, x, rx, rx, true); % pairwise assert(stk_isequal_tolabs(Q1, zeros(5, 1))); ***** shared x, y, z, rx, ry, rz x = zeros (11, 5); rx = 2 * ones (11, 5); y = zeros (13, 5); ry = 2 * ones (13, 5); z = ones ( 7, 5); rz = 2 * ones ( 7, 5); ***** test Qx = stk_gpquadform(x, [], rx); assert(isequal(Qx, zeros(11))); ***** test Qxx = stk_gpquadform(x, x, rx, rx); assert(isequal(Qxx, zeros(11))); ***** test Qxy = stk_gpquadform(x, y, rx, ry); assert(isequal(Qxy, zeros(11, 13))); ***** test Qzz = stk_gpquadform(z, [], rz); assert(isequal(Qzz, zeros(7))); ***** test Qxz = stk_gpquadform(x, z, rx, rz); assert(stk_isequal_tolabs(Qxz, 5/8 * ones(11, 7))); 17 tests, 17 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist_exact.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_filldist_exact.m ***** test d = 3; x = rand(7, d); box = repmat([0; 1], 1, d); fd1 = stk_filldist_exact(x, box); fd2 = stk_filldist_exact(stk_dataframe(x), stk_dataframe(box)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test for dim = 1:6, x = 0.5 * ones(1, dim); fd = stk_filldist_exact(x); % [0; 1]^d is the default box assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], box = repmat([1; 2], 1, dim); x = 1 + 0.5 * ones(1, dim); fd = stk_filldist_exact(x, box); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], x = zeros(1, dim); [fd, ymax] = stk_filldist_exact(x); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 4 tests, 4 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist_discretized.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_filldist_discretized.m ***** error stk_filldist_discretized(0.0) % incorrect nb of arguments ***** error stk_filldist_discretized(0.0, []) % second arg is empty ***** error stk_filldist_discretized([], 0.0) % first arg is empty ***** test d = 3; x = rand(7, d); y = rand(20, d); fd1 = stk_filldist_discretized(x, y); fd2 = stk_filldist_discretized(stk_dataframe(x), stk_dataframe(y)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test n = 5; for dim = 1:10, x = rand(n, dim); fd = stk_filldist_discretized(x, x); assert(stk_isequal_tolabs(fd, 0.0)); end ***** test for dim = 1:10, x = rand(1, dim); y = rand(1, dim); fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, norm(x - y))); end ***** test n = 4; for dim = 2:10, x = zeros(n, dim); y = rand(1, dim); fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, max(stk_dist(x, y)))); end ***** test for dim = [1 3 6], x = 0.5 * ones(1, dim); y = stk_sampling_regulargrid(2^dim, dim); % [0; 1]^d is the default box fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], x = zeros(1, dim); y = stk_sampling_regulargrid(3^dim, dim); [fd, ymax] = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_filldist.m ***** test %%% exact d = 3; x = rand(7, d); box = repmat([0; 1], 1, d); fd1 = stk_filldist(x, box); fd2 = stk_filldist(stk_dataframe(x), stk_dataframe(box)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test %%% discretized d = 3; x = rand(7, d); y = rand(20, d); fd1 = stk_filldist(x, y); fd2 = stk_filldist(stk_dataframe(x), stk_dataframe(y)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test n = 5; % must be bigger than 2 for dim = 1:10, x = rand(n, dim); fd = stk_filldist(x, x); assert(stk_isequal_tolabs(fd, 0.0)); end ***** test %%% exact for dim = 1:6, x = 0.5 * ones(1, dim); fd = stk_filldist(x); % [0; 1]^d is the default box assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test %%% discretized for dim = 1:6, x = 0.5 * ones(1, dim); y = stk_sampling_regulargrid(2^dim, dim); % [0; 1]^d is the default box fd = stk_filldist(x, y); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], box = repmat([1; 2], 1, dim); x = 1 + 0.5 * ones(1, dim); fd = stk_filldist(x, box); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test dim = 3; box = repmat([-1; 1], 1, dim); x = stk_sampling_randunif(20, dim, box); y = stk_sampling_regulargrid(3^dim, dim, box); fd1 = stk_filldist(x, box); fd2 = stk_filldist(x, y); assert(fd1 >= fd2 - 10 * eps); ***** test %%% exact for dim = [1 3 7], x = zeros(1, dim); [fd, ymax] = stk_filldist_exact(x); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end ***** test %%% discretized for dim = [1 3 7], x = zeros(1, dim); y = stk_sampling_regulargrid(3^dim, dim); [fd, ymax] = stk_filldist(x, y); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_dist.m] >>>>> /build/octave-stk-2.7.0/inst/misc/dist/stk_dist.m ***** error stk_dist(); ***** error stk_dist(0, 0, 0); ***** error stk_dist(0, 0, 0, 0); ***** error stk_dist(0, ones(1, 2)); ***** error stk_dist(eye(3), ones(1, 2)); ***** error stk_dist(ones(2, 1), zeros(2)); ***** shared x, y, z x = zeros(11, 5); y = zeros(13, 5); z = ones(7, 5); ***** test Dx = stk_dist(x); assert(isequal(Dx, zeros(11))); ***** test Dxx = stk_dist(x, x); assert(isequal(Dxx, zeros(11))); ***** test Dxy = stk_dist(x, y); assert(isequal(Dxy, zeros(11, 13))); ***** test Dzz = stk_dist(z, z); assert(isequal(Dzz, zeros(7))); ***** test Dxz = stk_dist(x, z); assert(stk_isequal_tolabs(Dxz, sqrt(5)*ones(11, 7))); ***** test x = randn(5,3); y = randn(5,3); D1 = stk_dist(x, y, true); % pairwise D2 = stk_dist(x, y); assert(stk_isequal_tolabs(D1, diag(D2))); ***** test x = randn(5,3); D1 = stk_dist(x, [], true); % pairwise assert(stk_isequal_tolabs(D1, zeros(5, 1))); D1 = stk_dist(x, x, true); % pairwise assert(stk_isequal_tolabs(D1, zeros(5, 1))); 13 tests, 13 passed, 0 known failure, 0 skipped [inst/misc/design/stk_phipcrit.m] >>>>> /build/octave-stk-2.7.0/inst/misc/design/stk_phipcrit.m ***** shared x x = [0, 0.2, 0.4, 0.6, 0.8, 1.0; 0, 0.6, 0.8, 1.0, 0.2, 0.4]'; ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 10), 3.946317664423303, 1e-15)) ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 50), 3.614077252813102, 1e-15)); ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 100), 3.574589859827413, 1e-15)); ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 1e9), 1 / stk_mindist (x), 1e-8)); ***** assert (isequal (stk_phipcrit (ones (2)), Inf)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/design/stk_maxabscorr.m] >>>>> /build/octave-stk-2.7.0/inst/misc/design/stk_maxabscorr.m ***** assert (stk_isequal_tolabs (0.0, ... % Test on an OLHS(5) stk_maxabscorr ([0.4 0.8 0 -0.4 -0.8; -0.8 0.4 0 0.8 -0.4]'))); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/stk_lm_polynomial.m] >>>>> /build/octave-stk-2.7.0/inst/lm/stk_lm_polynomial.m ***** error lm = stk_lm_polynomial (); ***** test lm = stk_lm_polynomial (-1); assert (isa (lm, 'stk_lm_null')); ***** test lm = stk_lm_polynomial (0); assert (isa (lm, 'stk_lm_constant')); ***** test lm = stk_lm_polynomial (1); assert (isa (lm, 'stk_lm_affine')); ***** test lm = stk_lm_polynomial (2); assert (isa (lm, 'stk_lm_quadratic')); ***** test lm = stk_lm_polynomial (3); assert (isa (lm, 'stk_lm_cubic')); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_quadratic/stk_lm_quadratic.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_quadratic/stk_lm_quadratic.m ***** test stk_test_class ('stk_lm_quadratic') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_quadratic/feval.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_quadratic/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_quadratic (), x); assert (isequal (size (P), [n, 1 + d * (d + 3) / 2])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_null/stk_lm_null.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_null/stk_lm_null.m ***** test stk_test_class ('stk_lm_null') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_null/feval.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_null/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_null (), x); assert (isequal (size (P), [n, 0])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_matrix/stk_lm_matrix.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_matrix/stk_lm_matrix.m ***** test stk_test_class ('stk_lm_matrix') ***** test %%% dim 1 data = rand (10, 1); idx = 3:7; lm = stk_lm_matrix (data); assert (isa (lm, 'stk_lm_matrix')); assert (isequal (data(idx, :), feval (lm, idx))); ***** test %%% dim 3 data = rand (10, 3); idx = 3:7; lm = stk_lm_matrix (data); assert (isa (lm, 'stk_lm_matrix')); assert (isequal (data(idx, :), feval (lm, idx))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_cubic/stk_lm_cubic.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_cubic/stk_lm_cubic.m ***** test stk_test_class ('stk_lm_cubic') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_cubic/feval.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_cubic/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_cubic (), x); assert (isequal (size (P), [n, 1 + d * (11 + d * (6 + d)) / 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_constant/stk_lm_constant.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_constant/stk_lm_constant.m ***** test stk_test_class ('stk_lm_constant') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_constant/feval.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_constant/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_constant (), x); assert (isequal (size (P), [n, 1])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_affine/stk_lm_affine.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_affine/stk_lm_affine.m ***** test stk_test_class ('stk_lm_affine') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_affine/feval.m] >>>>> /build/octave-stk-2.7.0/inst/lm/@stk_lm_affine/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_affine (), x); assert (isequal (size (P), [n, d + 1])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/test_functions/stk_testfun_goldsteinprice.m] >>>>> /build/octave-stk-2.7.0/inst/examples/test_functions/stk_testfun_goldsteinprice.m ***** test % Use with nargin == 0 for visualisation stk_testfun_goldsteinprice (); close all; warning: using the gnuplot graphics toolkit is discouraged The gnuplot graphics toolkit is not actively maintained and has a number of limitations that are unlikely to be fixed. Communication with gnuplot uses a one-directional pipe and limited information is passed back to the Octave interpreter so most changes made interactively in the plot window will not be reflected in the graphics properties managed by Octave. For example, if the plot window is closed with a mouse click, Octave will not be notified and will not update its internal list of open figure windows. The qt toolkit is recommended instead. ***** assert (stk_isequal_tolabs ... (stk_testfun_goldsteinprice ([0, -1]), 3.0, 1e-12)) 2 tests, 2 passed, 0 known failure, 0 skipped [inst/examples/test_functions/stk_testcase_truss3.m] >>>>> /build/octave-stk-2.7.0/inst/examples/test_functions/stk_testcase_truss3.m ***** shared tc, xd, n tc = stk_testcase_truss3 (); n = 5; xd = stk_sampling_randunif (n, [], tc.search_domain); ***** test v = stk_testfun_truss3_vol (xd, tc.constants); z = stk_testfun_truss3_bb (xd, tc.constants); assert (isequal (size (v), [n 1])); assert (isequal (size (z), [n 5])); ***** test F = stk_dataframe (zeros (n, 2), {'F1' 'F2'}); F(:, 1) = tc.constants.F1_mean + tc.constants.F1_std * randn (n, 1); F(:, 2) = tc.constants.F2_mean + tc.constants.F2_std * randn (n, 1); x = [xd F]; v = stk_testfun_truss3_vol (x, tc.constants); z = stk_testfun_truss3_bb (x, tc.constants); assert (isequal (size (v), [n 1])); assert (isequal (size (z), [n 5])); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc05.m] >>>>> /build/octave-stk-2.7.0/inst/examples/03_miscellaneous/stk_example_misc05.m ***** test stk_example_misc05; close all; assert (isa (model.lognoisevariance, 'stk_gaussiannoise_het0')); #==========================# # stk_example_misc05 # #==========================# 'stk_example_misc05' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/03_miscellaneous/stk_example_misc05.m STK_EXAMPLE_MISC05 Parameter estimation for heteroscedastic noise variance DESCRIPTION We consider a 1d prediction problem with noisy data, where the variance of the noise depends on the input location. A simple heteroscedastic model is used, where the only parameter to be estimated is a dispersion parameter (the square of a scale parameter). More preciesely, the variance of the noise is assumed to be of the form tau^2(x) = phi * (x + 1) ^ 2, and the dispersion parameter phi is estimated together with the parameters of the covariance function. EXPERIMENTAL FEATURE WARNING This script demonstrates an experimental feature of STK (namely, gaussian noise model objects). STK users that wish to experiment with it are welcome to do so, but should be aware that API-breaking changes are likely to happen in future releases. We invite them to direct any questions, remarks or comments about this experimental feature to the STK mailing list. See also: stk_example_kb09 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = dim = 1 param = 0.066833 0.707310 lognoisevariance = gn = | | Heteroscedastic variance model: tau^2(x) = dispersion * variance_function(x) | | dispersion: 2.4169 [log_dispersion = 0.8825] | variance_function: @(x) (x + 1) .^ 2 | 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc04.m] >>>>> /build/octave-stk-2.7.0/inst/examples/03_miscellaneous/stk_example_misc04.m ***** test stk_example_misc04; close all; #==========================# # stk_example_misc04 # #==========================# 'stk_example_misc04' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/03_miscellaneous/stk_example_misc04.m STK_EXAMPLE_MISC04 Pareto front simulation DESCRIPTION We consider a bi-objective optimization problem, where the objective functions are modeled as a pair of independent stationary Gaussian processes with a Matern 5/2 anisotropic covariance function. Figure (a): represent unconditional realizations of the Pareto front and and estimate of the probability of being non-dominated at each point of the objective space. Figure (b): represent conditional realizations of the Pareto front and and estimate of the posteriorior probability of being non-dominated at each point of the objective space. EXPERIMENTAL FUNCTION WARNING This script uses the stk_plot_probdom2d function, which is currently considered an experimental function. Read the help for more information. REFERENCE [1] Michael Binois, David Ginsbourger and Olivier Roustant, Quantifying uncertainty on Pareto fronts with Gaussian Process conditional simu- lations, European J. of Operational Research, 2043(2):386-394, 2015. See also: stk_plot_probdom2d Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign Proba. of being dominated simulated Pareto fronts--| || |+ @&$# +* %=#&&$#@ + | 1000 +---++--+--+--++---+ ++||00% |+ @&$# +* %=#&&$#@ + | ||| | | | | | | || | @&$# * %=#&&$#@ | +|+ + + + + + + || 500 +|+ @&$# * %=#&&$#@ +-+| | | || | @&$# * %%%%&%%%%%%%%| | | || | @&$# * %=#&&$#@ | 500 +---+ +---+ ++||5% | @&$# * %=#&&$#@ | | | || | @&$# ****#*&$*******| | | || | @&$# $ %=#&&&&&&&&&&| | | || 0 +|+ @&$# $ %=#& $*@second objective| | ++||0% | @&$# $ %=#&%$%%%%%%%| +---+ +---+ || | @&$# $ =#&=$=======| | | || | @&$$&&&&&=###$#######| | | || | @@@@@@@@@@@@@@@@@@@@@| -500 | | || -500 +|+ @ ============| +---+ +---+ ++||5% | @ | | | || | @@@@@@@@@@@@@@@@@@@| | | || | | +|+ + + + + + + || |------------------------| -1000 |+|--|--|--|--|--|-| || + + + + + + -+---+20-1000100+---+0++-0% -300-200-1000 0 10002000 first objective first objective 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc03.m] >>>>> /build/octave-stk-2.7.0/inst/examples/03_miscellaneous/stk_example_misc03.m ***** test stk_example_misc03; close all; #==========================# # stk_example_misc03 # #==========================# 'stk_example_misc03' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/03_miscellaneous/stk_example_misc03.m STK_EXAMPLE_MISC03 How to deal with (known) seasonality Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = dim = 1 param = 1.4616 -1.7505 lognoisevariance = -4.6033 model2 = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = @(t) [ones(length (t), 1), sin(2 * pi * t / T0), cos(2 * pi * t / T0)] dim = 1 param = 4.0257 -8.1781 lognoisevariance = -4.5839 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc02.m] >>>>> /build/octave-stk-2.7.0/inst/examples/03_miscellaneous/stk_example_misc02.m ***** test stk_example_misc02; close all; #==========================# # stk_example_misc02 # #==========================# 'stk_example_misc02' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/03_miscellaneous/stk_example_misc02.m STK_EXAMPLE_MISC02 How to use priors on the covariance parameters A Matern covariance in dimension one is considered as an example. A Gaussian prior is used for all three parameters: log-variance, log-regularity and log- inverse-range. The corresponding parameter estimates are Maximum A Posteriori (MAP) estimates or, more precisely, Restricted MAP (ReMAP) estimates. Several values for the variance of the prior are successively considered, to illustrate the effect of this prior variance on the parameter estimates. When the variance is small, the MAP estimate is close to the mode of the prior. On the other hand, when the variance is large, the prior becomes "flat" and the MAP estimate is close to the ReML estimate (see figure b). Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign | prior std = 10.00 | prior std = 1.00 3 +|+ 4 +|+ #### %|%## ####%%%% 3 +|+# ##%%%%% 2 +|+&&&%&&&%# #%&&&&&&&& 2 +|+&&% #%%% %%&&&&&&& 1 +|+X==GG==&&%###&&&XXXXXX& 1 +|+X&&GG==&&% &&&&XXXXX& =|===&&&&====G=G=====predicted outp=|=====&&====G=G========== 0 +|+&&& %&&&&&&&&&&XXXXXX& 0 +|+&&& %&&&&&&&&&&XXXXXX& -1 +|+%# #### #%&&&&&&&& -1 +|+%# #%&&&&&&&& +|------------------------- -2 +|------------------------- -2 +-+ + + + + + -3 +-+ + + + + ##+ 0 0.2 0.4 0.6 0.8 1 0 0.2 0.4 0.6 0.8 1 | prior std = 0.20 | prior std = 0.01 6 +|+ 6 +|+ | ### | # 4 +|+ #%%%%%% 4 +|+ #%%%%% 2 +|+%# #&&% %&&&&&&&& 2 +|+ %%# #&&&&&&&& &|&&==GG=====&&======predicted outp&|&&&=GG=====#%=========== 0 +|+==& %&&=G=G&&&&XXXXX& 0 +|+=== %&=G=G&&&&&&XXX& -2 +|+&% #%&&&&&&& -2 +|+&# #%%&&&&& +|------------------------- +|------------------------- -4 +-+ + + + + + -4 +-+ + + + + + 0 0.2 0.4 0.6 0.8 1 0 0.2 0.4 0.6 0.8 1 input x input x 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc01.m] >>>>> /build/octave-stk-2.7.0/inst/examples/03_miscellaneous/stk_example_misc01.m ***** test stk_example_misc01; close all; #==========================# # stk_example_misc01 # #==========================# 'stk_example_misc01' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/03_miscellaneous/stk_example_misc01.m STK_EXAMPLE_MISC01 Several correlation functions from the Matern family The Matern 1/2 correlation function is also known as the "exponential correla- tion function". This is the correlation function of an Ornstein-Ulhenbeck pro- cess. The Matern covariance function tends to the Gaussian correlation function when its regularity (smoothness) parameter tends to infinity. See also: stk_materncov_iso, stk_materncov_aniso Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe06.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe06.m ***** test stk_example_doe06; close all; #=========================# # stk_example_doe06 # #=========================# 'stk_example_doe06' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe06.m STK_EXAMPLE_DOE06 Sequential design for the estimation of an excursion set In this example, we consider the problem of estimating the set Gamma = { x in X | f(x) > z_crit }, where z_crit is a given value, and/or its volume. In a typical "structural reliability analysis" problem, Gamma would represent the failure region of a certain system, and its volume would correspond to the probability of failure (assuming a uniform distribution for the input). A Matern 5/2 prior with known parameters is used for the function f, and the evaluations points are chosen sequentially using any of the sampling criterion described in [1] (see also [2], section 4.3). REFERENCE [1] B. Echard, N. Gayton and M. Lemaire (2011). AK-MCS: an active learning reliability method combining Kriging and Monte Carlo simulation. Structural Safety, 33(2), 145-154. [2] J. Bect, D. Ginsbourger, L. Li, V. Picheny and E. Vazquez (2012). Sequential design of computer experiments for the estimation of a probability of failure. Statistics and Computing, 22(3), 773-793. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. Volume (reference value): 20.14% data_init = <4x2 stk_dataframe array> : x z initial design #1 : 0.000000 0.00000 initial design #2 : 0.333333 -0.43063 initial design #3 : 0.666667 -0.66886 initial design #4 : 1.000000 -1.20558 line 0: warning: iconv failed to convert degree sign |-------------------------Groung truth----------------------------| 1 +|+ + + + + +-+| +| + + + + +| | | 0.5 +|+ #### +-+| | ## ## | | ###### ## ## | $|$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$| 0 *|***** *** *** ** ** ** ** +-+| | **** ** ** * * * | z | *** *** * ** ** | -0.5 +|+ *** ** ** * +-+| | ** ** ** | | ****** ** | |----------------------------+ ** | -1 +|***?***z = f(x), below zcrit| * +-+| |###?###z = f(x), above zcrit| *****| +|-----------------------------------------------------------------| -1.5 +-+ + + + + +-+ 0 0.2 0.4 0.6 0.8 1 x Iteration #1 | Current sample size: n = 4 | Volume estimate (plugin): 0.00000 [ref: 0.20140] | Upper-bound on posterior std: 4.1087e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 4 +|+ ### | #%%%%%%%%%## ###%%%### ######## 2 +|+&&&&&&&&&&&&&&%# %%&&&&&&&&&&&%# #%%&&&&&&&&%%## 0 +|+$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z |&&&&XXXXXXXXXX&***G*******************G*******************G -2 +|+%%&&&&&&&&&&&&%# #%&&&&&&&&&&&&&&% %&&&&&&XXXXX&&&&&& -4 +|+ ###%%%%%### ##%%%%%%%## #%%%&&&&&&&%%# +|------------------------------------------------------------ -6 +-+ + + + + + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.4 +|+***F**** + + + + +-+| +|** **** + + + +| 0.3 +|* *** +-+| | ** ******** | criterion +|+ ** ** *** +-+| | * *** ** ******** | 0.1 +|+ ** * ** *** *** +-+| *|-----------------------------------------------------------| 0 *-+ + ***** + + ****** + ***** 0 0.2 0.4 0.6 0.8 1 x Iteration #2 | Current sample size: n = 5 | Volume estimate (plugin): 0.00000 [ref: 0.20140] | Upper-bound on posterior std: 3.0311e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 4 +|+ | ######## ######## 2 +|+ ###%%## #%&&&&&&&&&&&%# #%%&&&&&&&&%%## 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z |%%%# %&&&&&&&&&***G*********F*********G*******************G -2 +|+ ##### %&&&&&&&&&&&&&&# %&&&&&&XXXXX&&&&&& -4 +|+ ##%%%%%%## #%%%&&&&&&&%%# +|------------------------------------------------------------ -6 +-+ + + + + + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.25 +|+ + + **F* + + +-+| +| + + *** *** + + +| 0.2 +|+ ** ** +-+| 0.15 +|+ ***** ** * ***** +-+| | ** ** * ** *** *** | 0.1 +|** ** * ** ** ** ** +-+| 0.05 +|*** * ** * * ** ** +-+| +|-----------------------------------------------------------| 0 **+ ***** + ***** + + ****** + **** 0 0.2 0.4 0.6 0.8 1 x Iteration #3 | Current sample size: n = 6 | Volume estimate (plugin): 0.10170 [ref: 0.20140] | Upper-bound on posterior std: 2.8361e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 2 +|+ ####### 1 +|+ ###### #%%%# %%%%# ##%%%%%%%%%%# 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ -1 +|+&&&&*************G***&&&&% #&===****G****XXXXXXXX====&&&& z | #%&&&&&&&% ### &&&****************G -2 +|+ #%&&&&XXXXXXX&&&&% -3 +|+ #%%&&&&&&&&&%% -4 +|------------------------------------------------------------ -5 +-+ + + + + ### + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + F * + + +-+| +| + + ** *** + + +| 0.4 +|+ *** * * +-+| 0.3 +|+ * * * ** +-+| criterion | ** * ** * | 0.2 +|+ * ** * ** +-+| 0.1 +|** ** * * * +-+| +|-----------------------------------------------------------| 0 **+ ****** + *********+ *** +********** + ****** 0 0.2 0.4 0.6 0.8 1 x Iteration #4 | Current sample size: n = 7 | Volume estimate (plugin): 0.11020 [ref: 0.20140] | Upper-bound on posterior std: 2.1439e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 2 +|+ ####### 1 +|+ #%%%%%%%%%%# 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$ -1 +|+&&&&*************G**=& %==*****G*****XXXXXXX====&&&& z | #%&&&&&&&# &&&&***************G -2 +|+ %&&&&&XXXXXX&&&&# -3 +|+ #%%&&&&&&&&%# -4 +|------------------------------------------------------------ -5 +-+ + + + + + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + +* F + + +-+| +| + +* * + + +| 0.4 +|+ * ** +-+| 0.3 +|+ * *** +-+| criterion | ** * * | 0.2 +|+ *** * ** +-+| 0.1 +|** * * * ** +-+| +|-----------------------------------------------------------| 0 **+ ******* ************+ ****** *********** + ****** 0 0.2 0.4 0.6 0.8 1 x Iteration #5 | Current sample size: n = 8 | Volume estimate (plugin): 0.08750 [ref: 0.20140] | Upper-bound on posterior std: 1.9160e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 3 +|+ 2 +|+ ######## 1 +|+ #%%%&&&&&&%%# 0 +|+$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z &|&&**G*************G****& ********G**************==&&&# -1 +|+ #&&&&&&&&% #%%# %&&&&&XXXXXXX******G -2 +|+ %%&&&&&&&&&&&&&% -3 +|------------------------------------------------------------ -4 +-+ + + + +###### + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + F * + + +-+| +| + + * * + + +| 0.4 +|+ ** * +-+| 0.3 +|+ ** * +-+| criterion | ** * | 0.2 +|+ ** * ** +-+| 0.1 +|** ** * ********* +-+| +|-----------------------------------------------------------| 0 **+ ****** + *********** ******************* + ***** 0 0.2 0.4 0.6 0.8 1 x Iteration #6 | Current sample size: n = 9 | Volume estimate (plugin): 0.08440 [ref: 0.20140] | Upper-bound on posterior std: 1.7549e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 3 +|+ 2 +|+ ######## 1 +|+ ##%%&&&&&&%%# 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z &|&&**G*************G****# ********G**************==&&&# -1 +|+ #%&&&&&&%# #%%# %&&&&&XXXXXXX******G -2 +|+ #%%&&&&&&&&&&&&&% -3 +|------------------------------------------------------------ -4 +-+ + + + +###### + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + F + + +-+| +| + + * * + + +| 0.4 +|+ * * +-+| 0.3 +|+ * * +-+| criterion | * * | 0.2 +|+ * * +-+| 0.1 +|+ * * ********* +-+| +|-----------------------------------------------------------| 0 **+ ****** + ******************************* + ***** 0 0.2 0.4 0.6 0.8 1 x Iteration #7 | Current sample size: n = 10 | Volume estimate (plugin): 0.08500 [ref: 0.20140] | Upper-bound on posterior std: 1.8408e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 3 +|+ 2 +|+ ######## 1 +|+ #%%&&&&&&&%%## 0 +|+$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z &|&&**G*************G****# ********G***************=&&&# -1 +|+ #%&&&&&&%# #%%# %&&&&&XXXXXXXX*****G -2 +|+ #%&&&&&&&&&&&&&# -3 +|------------------------------------------------------------ -4 +-+ + + + + ##### + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + F + + +-+| +| + + * + + +| 0.4 +|+ * +-+| 0.3 +|+ * +-+| criterion | * | 0.2 +|+ * ***** +-+| 0.1 +|+ * *** *** +-+| +|-----------------------------------------------------------| 0 **+ ****** + ******************************* + ***** 0 0.2 0.4 0.6 0.8 1 x Iteration #8 | Current sample size: n = 11 | Volume estimate (plugin): 0.08520 [ref: 0.20140] | Upper-bound on posterior std: 1.8352e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 3 +|+ 2 +|+ ######## 1 +|+ #%%&&&&&&&%%## 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z &|&&**G*************G**** ********G*********F*****=&&&# -1 +|+ #%&&&&&&%# #%%# %&&&&&XXXXXXXX*****G -2 +|+ #%&&&&&&&&&&&&&# -3 +|------------------------------------------------------------ -4 +-+ + + + + ##### + 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.2 +|+ + + + + +-+| +| + + + **F* +| 0.15 +|+ ** *** +-+| | ** ** | 0.1 +|+ ** * +-+| |** ** * ** | 0.05 +|*** ****** ** ** +-+| +|-----------------------------------------------------------| 0 **+ ***** + ***************************** + **** 0 0.2 0.4 0.6 0.8 1 x Iteration #9 | Current sample size: n = 12 | Volume estimate (plugin): 0.20700 [ref: 0.20140] | Upper-bound on posterior std: 2.1764e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1.5 +|+ 1 +|+ #### | ##### #%&&&%&&&&&&% 0.5 +|+&&# %&&&&&&%%# *G**G* %==****G***X&&% z 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$ -0.5 +|+&&&&&************G***& ***&&&%%****&&% %==***&& | %&&&XXXX&&&& &*****G*&&&%# #===***# -1 +|------------------------------------------------------------ -1.5 +-+ #+### + + + ####+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + + * + *F +-+| +| + + + * + ** +| 0.4 +|+ *** ** +-+| 0.3 +|+ * * *** +-+| criterion | * * ** * | 0.2 +|+ * * * * +-+| 0.1 +|+ ** ** * ** +-+| +|-----------------------------------------------------------| 0 **+ ****** + ******************************* **** ***** 0 0.2 0.4 0.6 0.8 1 x Iteration #10 | Current sample size: n = 13 | Volume estimate (plugin): 0.19770 [ref: 0.20140] | Upper-bound on posterior std: 1.4831e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ #### | ###### %&&*** 0.5 +|+&%# #%&&&&&%# *G**G &&***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$ z %|&&&*G********X====&**** ***&% &**&&# **# -0.5 +|+### #&&&XXX******G=& ***&&&G**&% %G*&# -1 +|+ #%&&&&&&&&& &***** %***&& +|------------------------------------------------------------ -1.5 +-+ #+### + + + %%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + + F + * +-+| +| + + + ** + * +| 0.4 +|+ ** * +-+| 0.3 +|+ ** * +-+| criterion | ** * | 0.2 +|+ ** * +-+| 0.1 +|+ **** * +-+| +|-----------------------------------------------------------| 0 **+ ****** + ****************************** *************** 0 0.2 0.4 0.6 0.8 1 x Iteration #11 | Current sample size: n = 14 | Volume estimate (plugin): 0.20030 [ref: 0.20140] | Upper-bound on posterior std: 1.0422e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | ###### &*** 0.5 +|+&%# #%&&&&&%# *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$ z %|&&&*G********X====&**** ***&# &** ** -0.5 +|+### #&&&XXX******G=& ***&&&G** %G*&# -1 +|+ #%&&&&&&&&& &***** #***&& +|------------------------------------------------------------ -1.5 +-+ #+### + + + %%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + + + F +-+| +| + + + * + * +| 0.4 +|+ * * +-+| 0.3 +|+ * * +-+| criterion | * * | 0.2 +|+ * * +-+| 0.1 +|+ * * +-+| +|-----------------------------------------------------------| 0 **+ ****** + *********************************************** 0 0.2 0.4 0.6 0.8 1 x Iteration #12 | Current sample size: n = 15 | Volume estimate (plugin): 0.20130 [ref: 0.20140] | Upper-bound on posterior std: 9.6391e-02 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | ###### &*** 0.5 +|+&%# #%&&&&&%# *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$ z %|&&&*G********X====&**** ***&# &** ** -0.5 +|+### #&&&XXX******G=& ***&&&G** G*# -1 +|+ #%&&&&&&&&& &***** ***&% +|------------------------------------------------------------ -1.5 +-+ #+### + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + + F + +-+| +| + + + * + * +| 0.4 +|+ * * +-+| 0.3 +|+ * * +-+| criterion | * * | 0.2 +|+ * * +-+| 0.1 +|+ * * +-+| +|-----------------------------------------------------------| 0 **+ ****** + *********************************************** 0 0.2 0.4 0.6 0.8 1 x Iteration #13 | Current sample size: n = 16 | Volume estimate (plugin): 0.20120 [ref: 0.20140] | Upper-bound on posterior std: 9.4443e-02 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | ###### &*** 0.5 +|+&%# #%&&&&&%# *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$ z %|&&&*G********X====&**** ***&# &** ** -0.5 +|+### #&&&XXX******G=& ***&&&G** G*# -1 +|+ #%&&&&&&&&& &***** ***&% +|------------------------------------------------------------ -1.5 +-+ #+### + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.5 +|+ + + + + +-+| +| + + + + F +| 0.4 +|+ * +-+| 0.3 +|+ * +-+| criterion | * | 0.2 +|+ * +-+| 0.1 +|+ * +-+| +|-----------------------------------------------------------| 0 **+ ****** + *********************************************** 0 0.2 0.4 0.6 0.8 1 x Iteration #14 | Current sample size: n = 17 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 9.3767e-02 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | ###### &*** 0.5 +|+&%# #%&&&&&%# *G**G ***&*G* 0 +|+F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z %|&&&*G********X====&**** ***&# &** ** -0.5 +|+### #&&&XXX******G=& ***&&&G** G*# -1 +|+ #%&&&&&&&&& &***** ***&% +|------------------------------------------------------------ -1.5 +-+ #+### + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.08 +|*F + + + + +-+| +|** ** + + + +| 0.06 +|*** **** +-+| |* * * ** | 0.04 +|+ * ** * +-+| | * * ** | 0.02 +|+ * ** * +-+| +|-----------------------------------------------------------| 0 **+ **** + ********************************************* 0 0.2 0.4 0.6 0.8 1 x Iteration #15 | Current sample size: n = 18 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 3.5972e-02 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | &*** 0.5 +|+ ##%%%%## *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z | &=G******XXX====&**** ***&# &** ** -0.5 +|+ &&&XF*******G=& ***&&&G** G*# -1 +|+ %&&&&&&&&& &***** ***&% +|------------------------------------------------------------ -1.5 +-+ +### + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.02 +|+ F* + + + +-+| +| *** + + + +| 0.015 +|+ * ** +-+| | * * | 0.01 +|+ ** ** +-+| | * * | 0.005 +|+ * * +-+| +|-----------------------------------------------------------| 0 ********** + ********************************************* 0 0.2 0.4 0.6 0.8 1 x Iteration #16 | Current sample size: n = 19 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 1.1969e-01 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | &*** 0.5 +|+ #%%#%%%# *G**G ***&*G* 0 +|+$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z | &*G**&&# &&****&**** ***&# &** ** -0.5 +|+ %&&*G*& ***&&&G** G*# -1 +|+ &***** ***&% +|------------------------------------------------------------ -1.5 +-+ + + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.35 +|+ + + + + +-+| 0.3 +|+ + + + + +-+| 0.25 +|+ **F +-+| 0.2 +|+ **** +-+| | **** | 0.15 +|+ ***** +-+| 0.1 +|+ * * ** +-+| 0.05 +|-----------------------------------------------------------| 0 *********** * ********************************************** 0 0.2 0.4 0.6 0.8 1 x Iteration #17 | Current sample size: n = 20 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 1.3687e-02 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | &*** 0.5 +|+ *G**G ***&*G* 0 +|+$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z | &*G**&% &****&**** ***&# &** ** -0.5 +|+ %&*G*& ***&&&G** G*# -1 +|+ &***** ***&% +|------------------------------------------------------------ -1.5 +-+ + + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.01 +|+ + + + + +-+| +| F* + + + +| 0.008 +|+ ** +-+| 0.006 +|+ ** +-+| | ** | 0.004 +|+ *** +-+| 0.002 +|+ * * * +-+| +|-----------------------------------------------------------| 0 *********** ************************************************* 0 0.2 0.4 0.6 0.8 1 x Iteration #18 | Current sample size: n = 21 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 7.0251e-04 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | &*** 0.5 +|+ *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ z | &*G**& &****&**** ***&# &** ** -0.5 +|+ %&*G*& ***&&&G** G*# -1 +|+ &***** ***&% +|------------------------------------------------------------ -1.5 +-+ + + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.0025 +|+ + + + + +-+| +| + + F + + +| 0.002 +|+ * +-+| 0.0015 +|+ * +-+| | * | 0.001 +|+ * * +-+| 0.0005 +|+ * * +-+| +|-----------------------------------------------------------| 0 ************************************************************* 0 0.2 0.4 0.6 0.8 1 x Iteration #19 | Current sample size: n = 22 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 5.2671e-04 [target: 5.000e-04] line 0: warning: iconv failed to convert degree sign | 1 +|+ | &*** 0.5 +|+ *G**G ***&*G* 0 +|+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$F$$$$$$$$$ z | &*G**& &****&**** ***& &** ** -0.5 +|+ %&*G*& ***&&&G** G*# -1 +|+ &***** ***&% +|------------------------------------------------------------ -1.5 +-+ + + + + #%%+ 0 0.2 0.4 0.6 0.8 1 |-----------------------------------------------------------| 0.001 +|+ + + + + +-+| +| + + + + F +| 0.0008 +|+ * +-+| 0.0006 +|+ * +-+| | * | 0.0004 +|+ * +-+| 0.0002 +|+ * +-+| +|-----------------------------------------------------------| 0 ************************************************************* 0 0.2 0.4 0.6 0.8 1 x Iteration #20 | Current sample size: n = 23 | Volume estimate (plugin): 0.20140 [ref: 0.20140] | Upper-bound on posterior std: 4.3503e-04 [target: 5.000e-04] history = <23x5 stk_dataframe array> : x z vol_estim vol_err nmisclass initial design #1 : 0.000000 0.00000 NaN NaN NaN initial design #2 : 0.333333 -0.43063 NaN NaN NaN initial design #3 : 0.666667 -0.66886 NaN NaN NaN initial design #4 : 1.000000 -1.20558 0.0000 -0.2014 2014 MC point #03109 : 0.104181 -0.13302 0.0000 -0.2014 2014 MC point #08201 : 0.497616 0.26497 0.1017 -0.0997 1691 MC point #08583 : 0.446685 0.26124 0.1102 -0.0912 1412 MC point #03198 : 0.530547 0.00170 0.0875 -0.1139 1193 MC point #09741 : 0.426592 0.13131 0.0844 -0.1170 1170 MC point #05215 : 0.514042 0.15483 0.0850 -0.1164 1164 MC point #09750 : 0.429126 0.15040 0.0852 -0.1162 1162 MC point #09445 : 0.826747 0.44032 0.2070 0.0056 668 MC point #05170 : 0.892810 -0.42564 0.1977 -0.0037 37 MC point #07511 : 0.739471 0.18322 0.2003 -0.0011 11 MC point #09944 : 0.852998 0.16723 0.2013 -0.0001 3 MC point #00654 : 0.736643 0.14991 0.2012 -0.0002 2 MC point #05148 : 0.854319 0.15010 0.2014 0.0000 0 MC point #06810 : 0.042055 0.00865 0.2014 0.0000 0 MC point #06784 : 0.205718 0.14334 0.2014 0.0000 0 MC point #07498 : 0.214782 0.13922 0.2014 0.0000 0 MC point #07447 : 0.188661 0.11816 0.2014 0.0000 0 MC point #06976 : 0.514589 0.15036 0.2014 0.0000 0 MC point #06861 : 0.854326 0.15001 0.2014 0.0000 0 Final result: | Number of evaluations: 4 + 19 = 23. | Volume estimate (plugin): 20.1400% [ref: 20.1400%] 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe05.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe05.m ***** test stk_example_doe05; close all; #=========================# # stk_example_doe05 # #=========================# 'stk_example_doe05' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe05.m STK_EXAMPLE_DOE05 A simple illustration of 1D Bayesian optimization Our goal here is to minimize the one-dimensional function x |--> x * sin (x) over the interval [0; 4 * pi], using noisy evaluations. Evaluations points are chosen sequentially using either AKG criterion (default) or the EQI criterion (set SAMPCRIT_NAME to 'EQI'); Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,11" textcolor rgb " ^ line 0: invalid command | n = 5 + 0 = 5. 15 +|+ ######## ###### 10 +|+##%%&&&&&&&&&&&&&&&&%%%# ##%%%%%%%## ###### #|%&&&&&XXXXX**G*XXXXX&&&&&&%####%&&========&&&&&&&&%%%# 5 +|+&X*********&&*********XX&&&&&&====XX******G**XXXX&&&&%## z 0 +|+***=============&&XXX******G*********XXX&&&=******XX&&&&%% -5 +|+&&&&&&&&%## #=============&&&&XX&&&&&&&%%%&===XX******&& #|#%%%%%### ##%%%%%%%##%%%&&&&%%%## ##%===&&XXX**G -10 +|------------------------------------------------------------ -15 +-+ + + + + + ###### + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.16 +|+ + + + + + +-+| 0.14 +|+ + + + + + *F +-+| 0.12 +|+ ** *+-+| 0.1 +|+ * *+-+| AKG0.08 +|+ * *-+| 0.06 +|+ ** *-+| 0.04 +|+ * *-+| 0.02 +|-----------------------------------------------------------| 0 ********************************** ************ +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 5 = 10. 15 +|+ ######## ###### 10 +|+##%%&&&&&&&&&&&&&&&&%%## ##%%%%%%%## #|%&&&&&XXXXXX*G*XXXXX&&&&&%%###%%&&========&&%%## 5 +|+&X*********&&********XXX&&&&&&====X*******G*&&&%# z 0 +|+***=============&&XXX******G********XXX&&&&****&&&# -5 +|+&&&&&&&&%## #=============&&&&&&&&&&&&%%%&&==***&G%## #% #|#%%%%%### ##%%%%%%%%#%%%%%%%%%### ##&==********G -10 +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.35 +|+ + + + + + +-+| 0.3 +|+ + + + + + +-+| 0.25 +|+ *F +-*| 0.2 +|+ * * +**| AKG | * * * | 0.15 +|+ ** * +*+| 0.1 +|+ ** * +*+| 0.05 +|-----------------------------------------------------------| 0 ************************************************ + **-+ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 10 = 15. 20 +|+ 15 +|+ ##%%%%%## ##%%%%### ####### 10 +|+#%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%# 5 +|+&&&XXXXX****G****XXXX&&&&&%#%&&&==========&&%%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&****&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=****G&&&&GG -10 +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.05 +|+ + + + + + +-+| +| + + + + + +| 0.04 +|+ *F+-+| 0.03 +|+ **+-+| AKG | ** * ** | 0.02 +|+ **** * *-*| 0.01 +|+ ** *** +-*| +|-----------------------------------------------------------| 0 ************************************ *************+ +-+ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 15 = 20. 20 +|+ 15 +|+ ##%%%%%## ##%%%%### ####### 10 +|+#%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXXX****G****XXXX&&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&****&& -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=****G% #%GG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G#%G# + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.05 +|+ + + + + + F *-+| +| + + + + + * * **+| 0.04 +|+ * * **+| 0.03 +|+ * * *+*+| AKG | * * * *| 0.02 +|+ ** * *+-*| 0.01 +|+ ** * *+-*| +|-----------------------------------------------------------| 0 **************************************************+ * +-+ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 20 = 25. 20 +|+ ## 15 +|+ #%%%%%%%## #%%%%%%## ###%%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXXX****G****XXXXX&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXX&&&&%%========XXX****G****XXXXXX&&&&&&****&& -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=****G###GGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G##G + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.04 +|+ + + + + + +-+| 0.035 +|+ + + + + + F *-+| 0.03 +|+ *** *-+| 0.025 +|+ * * **+| AKG 0.02 +|+ * * *+*+| 0.015 +|+ * ***+*+| 0.01 +|+ * ***+*+| 0.005 +|-----------------------------------------------------------| 0 ************************ *********** ************** * +-* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 25 = 30. 20 +|+ ## 15 +|+ #%%%%%%%## #%%%%%%## ####%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXXX****G****XXXXX&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXX&&&&%%========XXX****G****XXXXXX&&&&&&****&& -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=****G# GGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G #G + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.06 +|+ + + + + + +-+| 0.05 +|+ + + + + + * F-+| | ** ** | 0.04 +|+ * * *+*+| AKG0.03 +|+ * * *+*+| 0.02 +|+ * * *+-*| | * ** *| 0.01 +|-----------------------------------------------------------| 0 *************************************************** * +-+ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 30 = 35. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ###%%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&&%# #%%&&&&&&&&%# 5 +|+&&&XXXXX****G****XXXXX&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXXX&&&&%========XXX****G****XXXXXX&&&&&&****&& -5 +|+&&&&&&&%%# #%&&======&&&&&&&&&&&&&%%# #%&=****G GGG -10 +|------------------------------------------------------------ -15 +-+ + + + ## + + G##G + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.04 +|+ + + + + + +-+| 0.035 +|+ + + + + + +-+| 0.03 +|+ ** F-+| 0.025 +|+ ** **+| AKG 0.02 +|+ ** *+*+| 0.015 +|+ * * *+*+| 0.01 +|+ * ***+*+| 0.005 +|-----------------------------------------------------------| 0 ************************************ **************** * +-* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 35 = 40. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ###%%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&&%# #%%&&&&&&&&%# 5 +|+&&&XXXXX****G****XXXXX&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&&# 0 +|+=XXXXXX&&&&%========XXX****G****XXXXXX&&&&&&****&& -5 +|+&&&&&&&%%# #%&&======&&&&&&&&&&&&&%%# #%&=***&G GGG -10 +|------------------------------------------------------------ -15 +-+ + + + ## + + G#%GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.03 +|+ + + + + + +-+| 0.025 +|+ + + + + + F* *-+| | ** * | 0.02 +|+ ** **+| AKG0.015 +|+ ** *+*+| 0.01 +|+ * ***+*+| | * *** * | 0.005 +|-----------------------------------------------------------| 0 ************************ *********** **************** * +-* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 40 = 45. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ###%%%## 10 +|+%%&&&&&&&&&&&&&&&&&&&&&%# #%%&&&&&&&&%# 5 +|+&&XXXXXX****G****XXXXX&&&&%#%&&&==========&&&%# z &|*********=====&&X********X&&&&==***********G**&&%# 0 +|+=XXXXXX&&&&%========XXX****G****XXXXXX&&&&&&****&& -5 +|+&&&&&&&%%# #%&&======&&&&&&&&&&&&&%%# #&&=***&G GGG -10 +|------------------------------------------------------------ -15 +-+ + + # + ## + + G##GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.02 +|+ + + + + + +-+| +| + + + + + * *F +| 0.015 +|+ *** **-+| | * * ** | AKG 0.01 +|+ * ** +*+| | * ** * | 0.005 +|+ ** ** +*+| +|-----------------------------------------------------------| 0 *********************** ********* ************* * +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 45 = 50. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ##%%%%## 10 +|+%%&&&&&&&&&&&&&&&&&&&&&%# #%%&&&&&&&&%# 5 +|+&&XXXXXX****G****XXXXX&&&&%#%&&&==========&&%%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXXX&&&&%========XXX****G****XXXXXX&&&&&&***&&% -5 +|+&&&&&&&%%# #%&&======&&&&&&&&&&&&&%%# #&&=***&G GGGG -10 +|------------------------------------------------------------ -15 +-+ + + ## + # + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.02 +|+ + + + + + +-+| +| + + + + + +| 0.015 +|+ F* +-+| | *** ** | AKG 0.01 +|+ * * * *-+| | * * * * | 0.005 +|+ * ** *-+| +|-----------------------------------------------------------| 0 ****** *************** ********* ************* * +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 50 = 55. 20 +|+ 15 +|+ ##%%%%%%## ##%%%%### ###%%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G***XXXXXX&&&&&&&***&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #&&=***&G GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.014 +|+ + + + + + +-+| 0.012 +|+ + + + + + F* +-+| 0.01 +|+ * * *+-+| 0.008 +|+ * * **-+| AKG | * * * * | 0.006 +|+ ** * * *-+| 0.004 +|+ * ** *-+| 0.002 +|-----------------------------------------------------------| 0 *********************** ********** ************* * +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 55 = 60. 20 +|+ 15 +|+ ##%%%%%%## ##%%%%### ######## 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&***&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #&&=***GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.007 +|+ + + + + + +-+| 0.006 +|+ + + + + + ** F*-+| 0.005 +|+ * * **-+| 0.004 +|+ * * **-+| AKG | * * ** | 0.003 +|+ * ** *-+| 0.002 +|+ *** * * ** *-+| 0.001 +|-----------------------------------------------------------| 0 ****** ************** ********* ************ +*+ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 60 = 65. 20 +|+ 15 +|+ ##%%%%%%# ##%%%%### ######## 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&***&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=***GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.007 +|+ + + + + + +-+| 0.006 +|+ + + + + + F* +-+| 0.005 +|+ ** **-+| 0.004 +|+ * * **-+| AKG | * * ** | 0.003 +|+ * * **-+| 0.002 +|+ *** * * ** +*+| 0.001 +|-----------------------------------------------------------| 0 ****** ************** ********* ************* * +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 65 = 70. 20 +|+ 15 +|+ ##%%%%%%# ##%%%%### ######## 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&***&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=***GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.006 +|+ + + + + + +-+| 0.005 +|+ + + + + + F+-+| | ** ** | 0.004 +|+ * * **-+| AKG0.003 +|+ * * **-+| 0.002 +|+ * ** *-+| | *** ** * ** * | 0.001 +|-----------------------------------------------------------| 0 ****** ************** ******** ************* +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 70 = 75. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ###%%### 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&&## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&****&% -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #%&=***GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.004 +|+ + + + + + +-+| +| + + + + + F +| 0.003 +|+ ** **-+| | **** * | AKG0.002 +|+ * * ** *-+| | *** *** * ** * | 0.001 +|+ *** * ** ** * * ** *-+| +|-----------------------------------------------------------| 0 ***** ************* ******* ************ * +** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 75 = 80. 20 +|+ ### 15 +|+ ##%%%%%%%## #%%%%%%## ###%%%## 10 +|+%%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&&## 5 +|+&&&XXXX*****G****XXXXX&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G**&&% 0 +|+=XXXXX&&&&%%========XXX****G****XXXXX&&&&&&&***&&# -5 +|+&&&&&&&%%# #%%&======&&&&&&&&&&&&&%%# #&&=***GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.01 +|+ + + + + + +-+| +| + + + + + F * +| 0.008 +|+ ** **+-+| 0.006 +|+ ** **+-+| AKG | * * * * | 0.004 +|+ * * * *-+| 0.002 +|+ ** * * * *-+| +|-----------------------------------------------------------| 0 ****** ************** ********* ************ * *** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 80 = 85. 20 +|+ 15 +|+ ##%%%%%## ##%%%%### ######## 10 +|+#%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%# 5 +|+&&&XXXX*****G****XXXX&&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G*=&&# 0 +|+=XXXXX&&&&%%========XXX****G***XXXXXX&&&&&&&***&& -5 +|+&&&&&&%%%# #%%&======&&&&&&&&&&&&%%%# %&&****GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.02 +|+ + + + + + F +-+| +| + + + + + ** * +| 0.015 +|+ ** **+-+| | * * * * | AKG 0.01 +|+ * * * *-+| | * * * * | 0.005 +|+ ** * * *-+| +|-----------------------------------------------------------| 0 *************************************************** * *** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 85 = 90. 20 +|+ 15 +|+ ##%%%%%## ##%%%%### ######## 10 +|+#%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%# 5 +|+&&&XXXX*****G****XXXX&&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&==***********G*=&&# 0 +|+=XXXXX&&&&%%========XXX****G***XXXXXX&&&&&&&***&& -5 +|+&&&&&&%%%# #%%&======&&&&&&&&&&&&%%%# %&&****GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.02 +|+ + + + + + +-+| +| + + + + + * F +| 0.015 +|+ ** **+-+| | ** * * | AKG 0.01 +|+ * * * *-+| | * * * * | 0.005 +|+ * * * *-+| +|-----------------------------------------------------------| 0 *************************************************** * *** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign multiplot> " font ":Bold,8.8" textcolor rgb " ^ line 0: invalid command | n = 5 + 90 = 95. 20 +|+ 15 +|+ ##%%%%%## ##%%%%### ######## 10 +|+#%&&&&&&&&&&&&&&&&&&&&%%# #%%&&&&&&&%# 5 +|+&&&XXXX*****G****XXXX&&&&&%#%&&&==========&&%# z &|*********=====&&X********X&&&&=************G*=&&# 0 +|+=XXXXX&&&&%%========XXX****G***XXXXX&&&&&&&&***&& -5 +|+&&&&&&%%%# #%%&======&&&&&&&&&&&&%%## %&&****GG GGGG -10 +|------------------------------------------------------------ -15 +-+ + + + + + G GG + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.02 +|+ + + + + + +-+| +| + + + + + +| 0.015 +|+ F* *+-+| | ** ** | AKG 0.01 +|+ ** * *-+| | * * * * | 0.005 +|+ * * * *-+| +|-----------------------------------------------------------| 0 **************************************************** * *** 0 2 4 6 8 10 12 x : x z init001 : 0.00000 -0.4263 init002 : 3.00000 6.7048 init003 : 6.00000 -0.9651 init004 : 9.00000 3.4156 init005 : 12.00000 -7.4684 xg(186) : 11.15578 -11.3533 xg(180) : 10.79397 -5.0765 xg(200) : 12.00000 -8.9511 xg(182) : 10.91457 -9.4023 xg(199) : 11.93970 -8.5005 xg(182) : 10.91457 -12.3133 xg(193) : 11.57789 -8.5314 xg(179) : 10.73367 -9.6408 xg(198) : 11.87940 -6.8959 xg(178) : 10.67337 -8.5977 xg(189) : 11.33668 -13.1250 xg(195) : 11.69849 -10.9581 xg(195) : 11.69849 -12.1462 xg(180) : 10.79397 -12.8978 xg(195) : 11.69849 -9.9129 xg(180) : 10.79397 -9.5065 xg(195) : 11.69849 -8.7535 xg(180) : 10.79397 -10.3859 xg(194) : 11.63819 -8.0037 xg(194) : 11.63819 -9.1369 xg(180) : 10.79397 -9.4826 xg(194) : 11.63819 -10.9711 xg(181) : 10.85427 -7.3334 xg(194) : 11.63819 -10.4755 xg(181) : 10.85427 -11.6223 xg(194) : 11.63819 -11.9429 xg(181) : 10.85427 -10.8214 xg(194) : 11.63819 -8.5773 xg(181) : 10.85427 -12.5186 xg(194) : 11.63819 -10.3886 xg(194) : 11.63819 -14.2329 xg(181) : 10.85427 -12.1642 xg(194) : 11.63819 -10.3882 xg(181) : 10.85427 -11.4092 xg(194) : 11.63819 -8.5200 xg(181) : 10.85427 -12.9775 xg(194) : 11.63819 -6.3860 xg(187) : 11.21608 -10.9200 xg(191) : 11.45729 -10.7200 xg(191) : 11.45729 -10.5467 xg(192) : 11.51759 -8.3684 xg(191) : 11.45729 -9.3411 xg(178) : 10.67337 -10.2320 xg(191) : 11.45729 -11.6799 xg(191) : 11.45729 -7.4357 xg(178) : 10.67337 -9.9897 xg(190) : 11.39698 -12.9214 xg(191) : 11.45729 -11.7751 xg(179) : 10.73367 -11.4925 xg(191) : 11.45729 -7.6079 xg(178) : 10.67337 -8.2932 xg(178) : 10.67337 -11.4630 xg(190) : 11.39698 -9.3012 xg(178) : 10.67337 -7.2936 xg(191) : 11.45729 -11.5346 xg(191) : 11.45729 -11.2350 xg(181) : 10.85427 -10.4049 xg(181) : 10.85427 -10.6442 xg(191) : 11.45729 -7.8899 xg(191) : 11.45729 -13.7171 xg(181) : 10.85427 -10.7734 xg(181) : 10.85427 -10.8327 xg(191) : 11.45729 -11.3371 xg(181) : 10.85427 -10.9645 xg(181) : 10.85427 -11.0014 xg(191) : 11.45729 -11.7455 xg(181) : 10.85427 -13.8445 xg(191) : 11.45729 -7.0821 xg(190) : 11.39698 -12.3367 xg(190) : 11.39698 -11.3816 xg(190) : 11.39698 -9.5258 xg(190) : 11.39698 -9.9836 xg(190) : 11.39698 -9.7369 xg(178) : 10.67337 -11.4037 xg(189) : 11.33668 -9.6309 xg(178) : 10.67337 -10.6401 xg(189) : 11.33668 -8.0999 xg(189) : 11.33668 -8.1446 xg(178) : 10.67337 -10.0120 xg(189) : 11.33668 -10.7473 xg(178) : 10.67337 -9.3325 xg(178) : 10.67337 -9.6479 xg(178) : 10.67337 -11.2386 xg(189) : 11.33668 -10.2579 xg(178) : 10.67337 -10.2932 xg(189) : 11.33668 -10.4762 xg(189) : 11.33668 -11.0509 xg(178) : 10.67337 -11.1766 xg(189) : 11.33668 -8.8184 xg(189) : 11.33668 -14.2257 xg(178) : 10.67337 -11.2263 xg(189) : 11.33668 -13.7497 xg(178) : 10.67337 -8.1110 xg(189) : 11.33668 -10.0162 xg(178) : 10.67337 -11.3624 Number of evaluations: 5 + 95 = 100. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe04.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe04.m ***** test stk_example_doe04; close all; #=========================# # stk_example_doe04 # #=========================# 'stk_example_doe04' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe04.m STK_EXAMPLE_DOE04 Probability of misclassification The upper panel shows posterior means and variances as usual, and the threshold of interest, which is at T = 0.85 (dashed line). The lower panel shows the probability of misclassification as a function of x (blue curve), i.e., the probability that the actual value of the function is not on the same side of the threshold as the prediction (posterior mean). We also plot the expected future probability of misclassification (magenta curve), should a new evaluation be made at x = 3. Note that both probabilities are obtained using stk_pmisclass. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe03.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe03.m ***** test stk_example_doe03; close all; #=========================# # stk_example_doe03 # #=========================# 'stk_example_doe03' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe03.m STK_EXAMPLE_DOE03 A simple illustration of 1D Bayesian optimization Our goal here is to optimize (maximize) the one-dimensional function x |--> x * sin (x) over the interval [0; 4 * pi]. A Matern 5/2 prior with known parameters is used. Evaluations points are chosen sequentially using the Expected Improvement (EI) criterion, starting from an initial design of N0 = 3 points. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign | 15 +|+ 10 +|+ ####%%%%%%%%%%%##### ################ 5 +|+%&&&&&&&&&&&&&&&&&&&&&&%# #%===========&&&&&%%%## 0 +|+*====F========XXXXXXXX&&&&& ====&XXXXXXXXX===XX&&&&&&%% z &|&***************************G***********************XX&&&& -5 +|+&&&&&&XXXXXXXXXXXXXX====&&# #&&&&&&XXXXXXXXXXXX===*******G -10 +|+ ##%%&&&&&&&&&&&&&&&&%%# ##%%&&&&&&&&&&&&&&&=======# -15 +|------------------------------------------------------------ -20 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 1 +|+ + + + + + +-+| +| ***F******** + + + + +| 0.8 +|+ ** ****** +-+| 0.6 +|+* *** *********** +-+| EI |* ** *** *** | 0.4 +|* ** ** *** +-+| 0.2 +|+ ** ** ** +-+| *|-----------------------------------------------------------| 0 *-+ + + ***** + + ****** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 15 +|+ 10 +|+ ##%%%%%%%%#### #####%%%%%%###### 5 +|+%&&&% %&&&&&&&&&&&&&&&%# #%===========&&&&&&%%%# 0 +|+*****G******F*XXXXXXXX&&&&& ====&XXXXXXXXX===XXX&&&&&&% z &|&&&&&& #&&&&XX**************G************************X&&&& -5 +|+ #%&&&&&&&&&&====&&# #&&&&&&XXXXXXXXXXXX===X******G -10 +|+ #%%%%%%%%%%%# #%%&&&&&&&&&&&&&&&=======# -15 +|------------------------------------------------------------ -20 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.7 +|+ + *F* + + + + +-+| 0.6 +|+ + *** ****+ + + + +-+| 0.5 +|+ ** *** +-+| 0.4 +|+ *** ** ** *** +-+| EI | ** ** * ** **** ***** | 0.3 +|+* **** ** ** ** +-+| 0.2 +|** ** ** ** ** +-+| 0.1 +|-----------------------------------------------------------| 0 *** **+ + ******* + + ******* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 15 +|+ 10 +|+ #### #####%%%%%%###### 5 +|+%%%%# #### #%&&&&&&&%# #%=======F===&&&&&&%%%# 0 +|+*****G******G***&XXXXX&&&&& ====&XXXXXXXXX===XXX&&&&&&% z &|&&&&&& %&&&&&==************G************************X&&&& -5 +|+ #%&&&&====&&# #&&&&&&XXXXXXXXXXXX===X******G -10 +|+ ####### #%%&&&&&&&&&&&&&&&=======# -15 +|------------------------------------------------------------ -20 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.5 +|+ + + + + + +-+| +| + + + + + +| 0.4 +|+ *** ****F**** +-+| 0.3 +|+ * ** * **** ** *** +-+| EI | * * *** ** ** ** *** | 0.2 +|+* **** * ** ** ** ** +-+| 0.1 +|** ** * ** ** ** ** +-+| +|-----------------------------------------------------------| 0 *** * + *** + ******* + + ******* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 15 +|+ ### 10 +|+ #%%%%%# #%&&&&%%%## | #### #%%%%%%## #&&===***G***XX&&&&&%%# 5 +|+&&&&&&&&&&&&#&&&&&&&&&&&&% #&==*****&&%&=F****XX&&&&%# z 0 +|+*****G******G***********&&*G*****X&&&% #&===X****X&&&% -5 +|+&&&% ### %&========****=&&&&&&%% #%===XX******&% | %%&&&&&&&&% #### #%===&&&&&**G -10 +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.35 +|+ + + + + F + +-+| 0.3 +|+ + + + + *** + +-+| 0.25 +|+ *** ** ** +-+| 0.2 +|+ * * * ** +-+| EI | * *** * | 0.15 +|+ ** ** ** +-+| 0.1 +|+ * ** ** +-+| 0.05 +|-----------------------------------------------------------| 0 ************************************ + * + ********* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 15 +|+ 10 +|+ #%&&&&% | #### #%%%%%%## %&&==**F*G*= ####### 5 +|+&&&&&&&&&&&& &&&&&&&&&&&%% #&=****&&&% &*G*&&&&&&&%%# z 0 +|+*****G******G*********XX&&&G****&&&&# *****XXX&&&&# -5 +|+&&&% ### %&======******=&&&&&%# %===*******&&% | %%&&&&&&&&% #%===&XXX***G -10 +|------------------------------------------------------------ -15 +-+ + + + + + ### + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.7 +|+ + + + F + +-+| 0.6 +|+ + + + *** + +-+| 0.5 +|+ * * +-+| 0.4 +|+ * * +-+| EI | * * | 0.3 +|+ * * +-+| 0.2 +|+ ** * +-+| 0.1 +|-----------------------------------------------------------| 0 ************************************ + ******************* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 10 +|+ ##%&&& | #### #%%%%%%## %&&=**FG*G** ####### 5 +|+&&&&&&&&&&&% %&&&&&&&&&&%# #&=***&& %*G*&&&&&&&%%# 0 +|+*****G******G*****XXXXX&&&&%****&&% ****XXX&&&&%# z |&&&&&# #%%%##&===**********G*&&&%# &==*****X&&&% -5 +|+## %&&&&======&& %===XX******G -10 +|+ ##%%&&&&%%# #%====&&==== +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.05 +|+ + + + + + +-+| +| + + + *F+ + +| 0.04 +|+ *** +-+| 0.03 +|+ * * +-+| EI | * ** | 0.02 +|+ ** ** +-+| 0.01 +|+ * ** +-+| +|-----------------------------------------------------------| 0 ************************************ ********************* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 10 +|+ | #### #%%%%%%## %&&***GF*G** ####### 5 +|+&&&&&&&&&&&% %&&&&&&&&&&%# &=***& #*G*&&&&&&&%%# 0 +|+*****G******G*****XXXXX&&&&%****&# ****XXX&&&&%# z |&&&&&# #%%%##&===**********G*&&% &=******X&&&% -5 +|+## %&&&&======&& %===XX******G -10 +|+ #%%&&&&&&%# #%====&&==== +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.025 +|+ + + + + + +-+| +| + + + F + +| 0.02 +|+ * +-+| 0.015 +|+ * +-+| EI | ** | 0.01 +|+ ** +-+| 0.005 +|+ ** +-+| +|-----------------------------------------------------------| 0 ************************************************************* 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 10 +|+ | #### #%%%%%%## #&&***GF*G** ####### 5 +|+&&&&&&&&&&&% %&&&&&&&&&%%# &=***& #*G*&&&&&&&%%# 0 +|+*****G******G*****XXXXX&&&&%***&&# ****XXX&&&&%# z |&&&&&# #%%%##&===**********G*&&% &=******X&&&% -5 +|+## %&&&&======&& %===XX******G -10 +|+ #%%&&&&&&%# #%====&&==== +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.006 +|+ + + + + + +-+| 0.005 +|+ + + + F + +-+| | * | 0.004 +|+ * +-+| EI 0.003 +|+ * +-+| 0.002 +|+ * +-+| | * | 0.001 +|-----------------------------------------------------------| 0 ********************* ************************************** 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 10 +|+ | #### #%%%%%%## #&&***GG*G** ####### 5 +|+&&&&&&&&&&&% %&&&&&&&&&%%# &=***& #*G*&&&&&&&%%# 0 +|+*****G******G*****XXXXX&&&&%***&& ****XXX&&&&%# z |&&&&&# #%%%##&===**F*******G*&&# &=******X&&&% -5 +|+## %&&&&======&& %===XX******G -10 +|+ #%%&&&&&&%# #%====&&==== +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.0006 +|+ + + + + + +-+| 0.0005 +|+ + +*F + + + +-+| | *** | 0.0004 +|+ * * +-+| EI 0.0003 +|+ * * +-+| 0.0002 +|+ * ** +-+| | ** * | 0.0001 +|-----------------------------------------------------------| 0 ********************+ *********** ************************ 0 2 4 6 8 10 12 x line 0: warning: iconv failed to convert degree sign | 10 +|+ | #### #&&F**GG*G** ####### 5 +|+&&&&&&&&&&&& # &****& #*G*&&&&&&&%%# 0 +|+*****G******G**&&% #%%%%%&***&& ****XXX&&&&%# z |&&&&&% #### #&*****G&&&****G*&%# &=******X&&&% -5 +|+## #&&&&*****=&& %===XX******G -10 +|+ #%%%%# #%====&&==== +|------------------------------------------------------------ -15 +-+ + + + + + + 0 2 4 6 8 10 12 |-----------------------------------------------------------| 0.00014 +|+ + + + + + +-+| 0.00012 +|+ + + + F + + +-+| 0.0001 +|+ ** +-+| 8e-05 +|+ ** +-+| | * * | 6e-05 +|+ * * +-+| 4e-05 +|+ * * *** +-+| 2e-05 +|-----------------------------------------------------------| 0 *********************************** ************** ******* 0 2 4 6 8 10 12 x : x z x0(001) : 0.00000 0.00000 x0(002) : 6.00000 -1.67649 x0(003) : 12.00000 -6.43888 xg(057) : 1.68421 1.67339 xg(099) : 2.94737 0.56886 xg(282) : 8.45113 6.98861 xg(299) : 8.96241 3.99788 xg(268) : 8.03008 7.90589 xg(258) : 7.72932 7.66935 xg(265) : 7.93985 7.91060 xg(266) : 7.96992 7.91642 xg(145) : 4.33083 -4.01937 Number of evaluations: 3 + 9 = 12. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe02.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe02.m ***** test stk_example_doe02; close all; #=========================# # stk_example_doe02 # #=========================# 'stk_example_doe02' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe02.m STK_EXAMPLE_DOE02 "Sequential Maximin" design In this example, a two-dimensional space-filling design is progressively enriched with new points using a "sequential maximin" approach. More precisely, the k-th point X(k, :) is selected to maximize the distance to the set of all previously selected points X(1, :), X(2, :), ..., X(k-1, :). NOTES: * The resulting design is NOT optimal with respect to the maximin criterion (separation distance). * This procedure is not truly a *sequential* design procedure, since the choice of the k-th point X(k, :) does NOT depend on the response at the previously selected locations X(i, :), i < k. REFERENCE [1] Emmanuel Vazquez and Julien Bect, "Sequential search based on kriging: convergence analysis of some algorithms", In: ISI - 58th World Statistics Congress of the International Statistical Institute (ISI'11), Dublin, Ireland, August 21-26, 2011. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 10, fd = 4.13e-01-------------------------| 1 F|+ + + + + +-+| +| + + + F + +| | F | | | 0.8 +|+ +-+| | F | | | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-+ 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 11, fd = 3.09e-01-------------------------| 1 F|+ + + + + +-+| +| + + + F + +| | F | | | 0.8 +|+ +-+| | F | | | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 12, fd = 2.87e-01-------------------------| 1 F|+ + + + + +-+| +| + + + F + +| | F | | | 0.8 +|+ +-+| | F | | | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 13, fd = 2.85e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 +|+ +-+| | F | | | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 14, fd = 2.53e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 +|+ +-+| | F | | F | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 15, fd = 2.43e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 F|+ +-+| | F | | F | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 16, fd = 2.38e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 F|+ +-+| | F | | F | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F | F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + F + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 17, fd = 2.34e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 F|+ +-+| | F | | F | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F F| F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + + + F + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 18, fd = 2.27e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 F|+ +-+| | F | | F | 0.6 +|+ F +-+| | F | | F | | | 0.4 +|+ +-+| | F F| F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + F + + F + +-F 0 0.2 0.4 0.6 0.8 1 line 0: warning: iconv failed to convert degree sign gnuplot> " font ":Bold,10" textcolor rgb " ^ line 0: invalid command |----------------------n = 19, fd = 2.25e-01-------------------------| 1 F|+ + + + + F +-+| +| + + + F + +| | F | | | 0.8 F|+ +-+| | F | | F | 0.6 +|+ F +-+| F| F | | F | | | 0.4 +|+ +-+| | F F| F| | 0.2 +|+ F +-+| | F | | | +|---------------------------------------------------------------------| 0 +-+ + F + + F + +-F 0 0.2 0.4 0.6 0.8 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe01.m] >>>>> /build/octave-stk-2.7.0/inst/examples/02_design_of_experiments/stk_example_doe01.m ***** test stk_example_doe01; close all; #=========================# # stk_example_doe01 # #=========================# 'stk_example_doe01' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/02_design_of_experiments/stk_example_doe01.m STK_EXAMPLE_DOE01 Examples of two-dimensional designs All designs are constructed on the hyper-rectangle BOX = [0; 2] x [0; 4]. Examples of the following designs are shown: a) Regular grid --> stk_sampling_regulargrid, b) "Maximin" latin hypercube sample --> stk_sampling_maximinlhs, c) RR2-scrambled Halton sequence --> stk_sampling_halton_rr2, d) Uniformly distributed random sample --> stk_sampling_randunif. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb09.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb09.m ***** test stk_example_kb09; close all; #========================# # stk_example_kb09 # #========================# 'stk_example_kb09' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb09.m STK_EXAMPLE_KB09 Generation of sample paths conditioned on noisy observations A Matern Gaussian process model is used, with constant but unknown mean (ordinary kriging) and known covariance parameters. Given noisy observations from the unknown function, a batch of conditioned sample paths is drawn using the "conditioning by kriging" technique (stk_generate_samplepaths function). See also: stk_generate_samplepaths, stk_conditioning, stk_example_kb05 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb08.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb08.m ***** test stk_example_kb08; close all; #========================# # stk_example_kb08 # #========================# 'stk_example_kb08' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb08.m STK_EXAMPLE_KB08 Generation of conditioned sample paths made easy It has been demonstrated, in stk_example_kb05, how to generate conditioned sample paths using unconditioned sample paths and conditioning by kriging. This example shows how to do the same in a more concise way, letting STK take care of the details. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb07.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb07.m ***** test stk_example_kb07; close all; #========================# # stk_example_kb07 # #========================# 'stk_example_kb07' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb07.m STK_EXAMPLE_KB07 Simulation of sample paths from a Matern process Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. line 0: warning: iconv failed to convert degree sign |--Matern, nu = 0.5------| |--Matern, nu = 1.5------| 3 +|+ + + + +-+| 4 +|+ + + + +-+| 2 +|+## # =$$ + + **-+| 3 +|+ ===** ***** + +-+| 1 =|#####$##$$$*&&$$$&&=**=*| 2 &|=== **##### **** +-+| 0 #|##$$$$$$$$$$$$$$$$$$$#$$| 1 #|=&#*###& ## $$$$$$$$+| response z$|$$$$$=$$*#*$$$#=$$$$$$$response z=|***#$&=$$$$#$$$$**##=#$$| -1 &|$$&&&&&**@@@$%%$=*##$$#&| 0 #|$$$$$$$$==$$$##########$| -2 #|+& & @@%%% %%%% +&&| -1 $|@##@@@%@@@@=@@# @@**@@@| -3 +|------------------------| -2 +|------------------------| -4 +-+ + + %%+ +-+ -3 +-+ + + + +-+ -1 -0.5 0 0.5 1 -1 -0.5 0 0.5 1 |--Matern, nu = 2.5------| |--Matern, nu = 10.0-----| 3 +|+ + ### + +-+| 3 +|+ + + + +-+| 2 +|+ ==** ###+## + +-+| 2 %|##### $$$ + +-*| $| ****$$$$*=== ===###| $|$$$$$###&&&$ $$&&&& **##| 1 $|$$$$$%$$##$$********##==| 1 #|****$$$$$$&&====****###*| response z#|#==%$$$####$$$$&&##$$$$response z&|@*%&&==$#$$$$&#####$$$$$| -1 *|#######@&&## $@$$$$$$$&$| -1 $|&&&== ##$$$$$$$$==&&| @|&&&#&&&&& $##$ ##@@# | =|#===%%% @@@%%%%%@@@@ | -2 @|------------------------| -2 =|------------------------| -3 +-+ + + + +-+ -3 +-+ + + + +-+ -1 -0.5 0 0.5 1 -1 -0.5 0 0.5 1 input variable x input variable x 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb06.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb06.m ***** test stk_example_kb06; close all; #========================# # stk_example_kb06 # #========================# 'stk_example_kb06' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb06.m STK_EXAMPLE_KB06 Ordinary kriging VS kriging with a linear trend The same dataset is analyzed using two variants of kriging. The left panel shows the result of ordinary kriging, in other words, Gaussian process interpolation assuming a constant (but unknown) mean. The right panel shows the result of adding a linear trend in the mean of the Gaussian process. The difference with the left plot is clear in extrapolation: the first predic- tor exhibits a "mean reverting" behaviour, while the second one captures an increasing trend in the data. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb05.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb05.m ***** test stk_example_kb05; close all; #========================# # stk_example_kb05 # #========================# 'stk_example_kb05' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb05.m STK_EXAMPLE_KB05 Generation of conditioned sample paths A Matern Gaussian process model is used, with constant but unknown mean (ordinary kriging) and known covariance parameters. Given noiseless observations from the unknown function, a batch of conditioned sample paths is drawn using the "conditioning by kriging" technique. In short, this means that unconditioned sample path are simulated first (using stk_generate_samplepaths), and then conditioned on the observations by kriging (using stk_conditioning). Note: in this example, for pedagogical purposes, conditioned samplepaths are simulated in two steps: first, unconditioned samplepaths are simulated; second, conditioned samplepaths are obtained using conditioning by kriging. In practice, these two steps can be carried out all at once using stk_generate_samplepath (see, e.g., stk_example_kb09). See also: stk_generate_samplepaths, stk_conditioning, stk_example_kb09 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb03.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb03.m ***** test stk_example_kb03; close all; #========================# # stk_example_kb03 # #========================# 'stk_example_kb03' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb03.m STK_EXAMPLE_KB03 Ordinary kriging in 2D An anisotropic Matern covariance function is used for the Gaussian Process (GP) prior. The parameters of this covariance function (variance, regularity and ranges) are estimated using the Restricted Maximum Likelihood (ReML) method. The mean function of the GP prior is assumed to be constant and unknown. This default choice can be overridden by means of the model.lm property. The function is sampled on a space-filling Latin Hypercube design, and the data is assumed to be noiseless. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. BOX = 2-dimensional hyper-rectangle (stk_hrect object): : x_1 x_2 lower_bounds : -5 0 upper_bounds : 10 15 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb02n.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb02n.m ***** test stk_example_kb02n; close all; #=========================# # stk_example_kb02n # #=========================# 'stk_example_kb02n' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb02n.m STK_EXAMPLE_KB02N Noisy ordinary kriging in 1D with parameter estimation This example shows how to estimate covariance parameters and compute ordinary kriging predictions on a one-dimensional noisy dataset. The model and data are the same as in stk_example_kb02, but this time the parameters of the covariance function and the variance of the noise are jointly estimated using the Restricted Maximum Likelihood (ReML) method. See also: stk_example_kb01n, stk_example_kb02 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.098610 2.302585 0.613435 lognoisevariance = -3.0915 True noise variance = 0.0400 Estimated noise variance = 0.0454 line 0: warning: iconv failed to convert degree sign | True function and noisy observed data 1.5 +|+ | G ***** +--------------------+ | *** G G** |***?***True function| 1 +|+ G** **G +---G---Observations-+ | ** *** | ** ** 0.5 +|+ ** G* G *** G| ** ** **** G**G* G |*G ** *** *** F1 0 *|+ ** ** *** *| ** **G **G | **G ** ** -0.5 +|+ G ** ** | ** *G | ***G ** -1 +|+ ** *G | ***G** +|------------------------------------------------------------------ -1.5 +-+ + + + + -1 -0.5 0 0.5 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb02.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb02.m ***** test stk_example_kb02; close all; #========================# # stk_example_kb02 # #========================# 'stk_example_kb02' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb02.m STK_EXAMPLE_KB02 Ordinary kriging in 1D with parameter estimation This example shows how to estimate covariance parameters and compute ordinary kriging predictions on a one-dimensional noiseless dataset. The model and data are the same as in stk_example_kb01, but this time the parameters of the covariance function are estimated using the Restricted Maximum Likelihood (ReML) method. See also: stk_example_kb01, stk_example_kb02n Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.2108 2.3026 0.7562 lognoisevariance = -Inf line 0: warning: iconv failed to convert degree sign | True function and observed data 1.5 +|+ | ***G* +--------------------+ | *** *** |***?***True function| 1 +|+ ** *** +---G---Observations-+ | ** *** | ** ** 0.5 +|+ ** ** *** | G* ** **** *G** |** ** G** *** F1 0 *|+ ** ** *** G| ** ** ** | ** ** ** -0.5 +|+ ** ** | ** * | *G* ** -1 +|+ ** ** | ****** +|------------------------------------------------------------------ -1.5 +-+ + + + + -1 -0.5 0 0.5 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb01n.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb01n.m ***** test stk_example_kb01n; close all; #=========================# # stk_example_kb01n # #=========================# 'stk_example_kb01n' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb01n.m STK_EXAMPLE_KB01N Ordinary kriging in 1D, with noisy data This example shows how to compute ordinary kriging predictions on a one-dimensional noisy dataset. The Gaussian Process (GP) prior is the same as in stk_example_kb01. The observation noise is Gaussian and homoscedastic (constant variance). Its variance is assumed to be known. Note that the kriging predictor, which is the posterior mean of the GP, does NOT interpolate the data in this noisy example. See also: stk_example_kb01, stk_example_kb02n Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.6931 1.3863 0.9163 lognoisevariance = -3.2189 line 0: warning: iconv failed to convert degree sign | True function and observed data 1.5 +|+ | G******* +--------------------+ | *** G G*** |***?***True function| 1 +|+ G** *G* +---G---Observations-+ | ** ** | ** *G G 0.5 G|+ ** ** ******G G |*G ** *** G *** 0 +|* ** ** *** *| ** **G *** | ** ** *G -0.5 +|+ G *G ** * | ** *G | ** G ** -1 +|+ *** *G | ***G*** +|------------------------------------------------------------------ -1.5 +-+ + + + + -1 -0.5 0 0.5 1 input variable x 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb01.m] >>>>> /build/octave-stk-2.7.0/inst/examples/01_kriging_basics/stk_example_kb01.m ***** test stk_example_kb01; close all; #========================# # stk_example_kb01 # #========================# 'stk_example_kb01' is a script from the file /build/octave-stk-2.7.0/debian/octave-stk/usr/share/octave/packages/stk-2.7.0/examples/01_kriging_basics/stk_example_kb01.m STK_EXAMPLE_KB01 Ordinary kriging in 1D, with noiseless data This example shows how to compute ordinary kriging predictions on a one-dimensional noiseless dataset. The word 'ordinary' indicates that the mean function of the GP prior is assumed to be constant and unknown. A Matern covariance function is used for the Gaussian Process (GP) prior. The parameters of this covariance function are assumed to be known (i.e., no parameter estimation is performed here). Note that the kriging predictor, which is the posterior mean of the GP, interpolates the data in this noiseless example. See also: stk_example_kb01n, stk_example_kb02 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.6931 1.3863 0.9163 lognoisevariance = -Inf line 0: warning: iconv failed to convert degree sign | True function and observed data 1.5 +|+ | ****G** +--------------------+ | *** **** |***?***True function| 1 +|+ *** *** +---G---Observations-+ | ** ** | ** ** 0.5 +|+ ** ** *****G |*G ** *** *** 0 +|* ** G* *** G| ** *** *** | ** ** ** -0.5 +|+ ** ** * | ** ** | *G ** -1 +|+ *** ** | ******* +|------------------------------------------------------------------ -1.5 +-+ + + + + -1 -0.5 0 0.5 1 input variable x 1 test, 1 passed, 0 known failure, 0 skipped [inst/covfcs/stk_sphcov_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_sphcov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error K = stk_sphcov_iso ([param; 1.234], x, y); ***** error stk_sphcov_iso (); ***** error stk_sphcov_iso (param); ***** error stk_sphcov_iso (param, x); ***** test stk_sphcov_iso (param, x, y); ***** test stk_sphcov_iso (param, x, y, -1); ***** test stk_sphcov_iso (param, x, y, -1, false); ***** error stk_sphcov_iso (param, x, y, -2); ***** test stk_sphcov_iso (param, x, y, -1); ***** error stk_sphcov_iso (param, x, y, 0); ***** test stk_sphcov_iso (param, x, y, 1); ***** test stk_sphcov_iso (param, x, y, 2); ***** error stk_sphcov_iso (param, x, y, 3); ***** error stk_sphcov_iso (param, x, y, nan); ***** error stk_sphcov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_sphcov_iso (param, x, y); K2 = stk_sphcov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_sphcov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_sphcov_iso (param, x, y); K2 = stk_sphcov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_sphcov_iso (param, x, y, i); dK2 = stk_sphcov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_sphcov_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_sphcov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_sphcov_aniso (); ***** error K0 = stk_sphcov_aniso (param); ***** error K0 = stk_sphcov_aniso (param, x); ***** test K1 = stk_sphcov_aniso (param, x, y); ***** test K2 = stk_sphcov_aniso (param, x, y, -1); ***** test K3 = stk_sphcov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_sphcov_aniso (param, u, v, -1); K2 = stk_sphcov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); assert (isequal (K1, K2)); ***** error stk_sphcov_aniso (param, x, y, -2); ***** test stk_sphcov_aniso (param, x, y, -1); ***** error stk_sphcov_aniso (param, x, y, 0); ***** test stk_sphcov_aniso (param, x, y, 1); ***** test stk_sphcov_aniso (param, x, y, 2); ***** error stk_sphcov_aniso (param, x, y, 3); ***** error stk_sphcov_aniso (param, x, y, nan); ***** error stk_sphcov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_sphcov_aniso (param, x, y); K2 = stk_sphcov_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_sphcov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_sphcov_aniso (param, x, y); K2 = stk_sphcov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_sphcov_aniso (param, x, y, i); dK2 = stk_sphcov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_noisecov.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_noisecov.m ***** shared ni, lognoisevariance, diff ni = 5; lognoisevariance = 0.0; diff = -1; ***** error K = stk_noisecov (); ***** error K = stk_noisecov (ni); ***** test K = stk_noisecov (ni, lognoisevariance); ***** test K = stk_noisecov (ni, lognoisevariance, diff); ***** test K = stk_noisecov (ni, lognoisevariance, diff, true); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 1.5; 2.9]); x = stk_sampling_randunif(5, dim); y = stk_sampling_randunif(5, dim); ***** error K = stk_materncov_iso ([param; 1.234], x, y); ***** error stk_materncov_iso(); ***** error stk_materncov_iso(param); ***** error stk_materncov_iso(param, x); ***** test stk_materncov_iso(param, x, y); ***** test stk_materncov_iso(param, x, y, -1); ***** test stk_materncov_iso(param, x, y, -1, false); ***** error stk_materncov_iso(param, x, y, -2); ***** test stk_materncov_iso(param, x, y, -1); ***** error stk_materncov_iso(param, x, y, 0); ***** test stk_materncov_iso(param, x, y, 1); ***** test stk_materncov_iso(param, x, y, 2); ***** test stk_materncov_iso(param, x, y, 3); ***** error stk_materncov_iso(param, x, y, 4); ***** error stk_materncov_iso(param, x, y, nan); ***** error stk_materncov_iso(param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 1.5; 2.9]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov_iso (param, x, y); K2 = stk_materncov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:3, dK = stk_materncov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif(n, dim); y = stk_sampling_randunif(n, dim); K1 = stk_materncov_iso(param, x, y); K2 = stk_materncov_iso(param, x, y, -1, true); assert(isequal(size(K1), [n n])); assert(stk_isequal_tolabs(K2, diag(K1))); for i = 1:3, dK1 = stk_materncov_iso(param, x, y, i); dK2 = stk_materncov_iso(param, x, y, i, true); assert(isequal(size(dK1), [n n])); assert(stk_isequal_tolabs(dK2, diag(dK1))); end 19 tests, 19 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov_aniso.m ***** shared param, x, y dim = 1; param = log ([1.0; 1.5; 2.8]); x = stk_sampling_randunif(5, dim); y = stk_sampling_randunif(5, dim); ***** error stk_materncov_aniso(); ***** error stk_materncov_aniso(param); ***** error stk_materncov_aniso(param, x); ***** test stk_materncov_aniso(param, x, y); ***** test stk_materncov_aniso(param, x, y, -1); ***** test stk_materncov_aniso(param, x, y, -1, false); ***** error stk_materncov_aniso(param, x, y, -2); ***** test stk_materncov_aniso(param, x, y, -1); ***** error stk_materncov_aniso(param, x, y, 0); ***** test stk_materncov_aniso(param, x, y, 1); ***** test stk_materncov_aniso(param, x, y, 2); ***** test stk_materncov_aniso(param, x, y, 3); ***** error stk_materncov_aniso(param, x, y, 4); ***** error stk_materncov_aniso(param, x, y, nan); ***** error stk_materncov_aniso(param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 1.5; 2.8; 2.7; 2.9]); nx = 4; ny = 10; x = stk_sampling_randunif(nx, dim); y = stk_sampling_randunif(ny, dim); ***** test K1 = stk_materncov_aniso(param, x, y); K2 = stk_materncov_aniso(param, x, y, -1); assert(isequal(size(K1), [nx ny])); assert(stk_isequal_tolabs(K1, K2)); ***** test for i = 1:(dim+2), dK = stk_materncov_aniso(param, x, y, i); assert(isequal(size(dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif(n, dim); y = stk_sampling_randunif(n, dim); K1 = stk_materncov_aniso(param, x, y); K2 = stk_materncov_aniso(param, x, y, -1, true); assert(isequal(size(K1), [n n])); assert(stk_isequal_tolabs(K2, diag(K1))); for i = 1:(dim+2), dK1 = stk_materncov_aniso(param, x, y, i); dK2 = stk_materncov_aniso(param, x, y, i, true); assert(isequal(size(dK1), [n n])); assert(stk_isequal_tolabs(dK2, diag(dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov52_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov52_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error K = stk_materncov52_iso ([param; 1.234], x, y); ***** error stk_materncov52_iso (); ***** error stk_materncov52_iso (param); ***** error stk_materncov52_iso (param, x); ***** test stk_materncov52_iso (param, x, y); ***** test stk_materncov52_iso (param, x, y, -1); ***** test stk_materncov52_iso (param, x, y, -1, false); ***** error stk_materncov52_iso (param, x, y, -2); ***** test stk_materncov52_iso (param, x, y, -1); ***** error stk_materncov52_iso (param, x, y, 0); ***** test stk_materncov52_iso (param, x, y, 1); ***** test stk_materncov52_iso (param, x, y, 2); ***** error stk_materncov52_iso (param, x, y, 3); ***** error stk_materncov52_iso (param, x, y, nan); ***** error stk_materncov52_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov52_iso (param, x, y); K2 = stk_materncov52_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_materncov52_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov52_iso (param, x, y); K2 = stk_materncov52_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_materncov52_iso (param, x, y, i); dK2 = stk_materncov52_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov52_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov52_aniso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_materncov52_aniso (); ***** error stk_materncov52_aniso (param); ***** error stk_materncov52_aniso (param, x); ***** test stk_materncov52_aniso (param, x, y); ***** test stk_materncov52_aniso (param, x, y, -1); ***** test stk_materncov52_aniso (param, x, y, -1, false); ***** error stk_materncov52_aniso (param, x, y, -2); ***** test stk_materncov52_aniso (param, x, y, -1); ***** error stk_materncov52_aniso (param, x, y, 0); ***** test stk_materncov52_aniso (param, x, y, 1); ***** test stk_materncov52_aniso (param, x, y, 2); ***** error stk_materncov52_aniso (param, x, y, 3); ***** error stk_materncov52_aniso (param, x, y, nan); ***** error stk_materncov52_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov52_aniso (param, x, y); K2 = stk_materncov52_aniso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_materncov52_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov52_aniso (param, x, y); K2 = stk_materncov52_aniso(param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_materncov52_aniso (param, x, y, i); dK2 = stk_materncov52_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov32_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov32_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error K = stk_materncov32_iso ([param; 1.234], x, y); ***** error stk_materncov32_iso (); ***** error stk_materncov32_iso (param); ***** error stk_materncov32_iso (param, x); ***** test stk_materncov32_iso (param, x, y); ***** test stk_materncov32_iso (param, x, y, -1); ***** test stk_materncov32_iso (param, x, y, -1, false); ***** error stk_materncov32_iso (param, x, y, -2); ***** test stk_materncov32_iso (param, x, y, -1); ***** error stk_materncov32_iso (param, x, y, 0); ***** test stk_materncov32_iso (param, x, y, 1); ***** test stk_materncov32_iso (param, x, y, 2); ***** error stk_materncov32_iso (param, x, y, 3); ***** error stk_materncov32_iso (param, x, y, nan); ***** error stk_materncov32_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov32_iso (param, x, y); K2 = stk_materncov32_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_materncov32_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov32_iso (param, x, y); K2 = stk_materncov32_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_materncov32_iso (param, x, y, i); dK2 = stk_materncov32_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov32_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_materncov32_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_materncov32_aniso (); ***** error K0 = stk_materncov32_aniso (param); ***** error K0 = stk_materncov32_aniso (param, x); ***** test K1 = stk_materncov32_aniso (param, x, y); ***** test K2 = stk_materncov32_aniso (param, x, y, -1); ***** test K3 = stk_materncov32_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_materncov32_aniso (param, u, v, -1); K2 = stk_materncov32_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); assert (isequal (K1, K2)); ***** error stk_materncov32_aniso (param, x, y, -2); ***** test stk_materncov32_aniso (param, x, y, -1); ***** error stk_materncov32_aniso (param, x, y, 0); ***** test stk_materncov32_aniso (param, x, y, 1); ***** test stk_materncov32_aniso (param, x, y, 2); ***** error stk_materncov32_aniso (param, x, y, 3); ***** error stk_materncov32_aniso (param, x, y, nan); ***** error stk_materncov32_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov32_aniso (param, x, y); K2 = stk_materncov32_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_materncov32_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov32_aniso (param, x, y); K2 = stk_materncov32_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_materncov32_aniso (param, x, y, i); dK2 = stk_materncov32_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_gausscov_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_gausscov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error K = stk_gausscov_iso ([param; 1.234], x, y); ***** error stk_gausscov_iso (); ***** error stk_gausscov_iso (param); ***** error stk_gausscov_iso (param, x); ***** test stk_gausscov_iso (param, x, y); ***** test stk_gausscov_iso (param, x, y, -1); ***** test stk_gausscov_iso (param, x, y, -1, false); ***** error stk_gausscov_iso (param, x, y, -2); ***** test stk_gausscov_iso (param, x, y, -1); ***** error stk_gausscov_iso (param, x, y, 0); ***** test stk_gausscov_iso (param, x, y, 1); ***** test stk_gausscov_iso (param, x, y, 2); ***** error stk_gausscov_iso (param, x, y, 3); ***** error stk_gausscov_iso (param, x, y, nan); ***** error stk_gausscov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_gausscov_iso (param, x, y); K2 = stk_gausscov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_gausscov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_gausscov_iso (param, x, y); K2 = stk_gausscov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_gausscov_iso (param, x, y, i); dK2 = stk_gausscov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_gausscov_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_gausscov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_gausscov_aniso (); ***** error K0 = stk_gausscov_aniso (param); ***** error K0 = stk_gausscov_aniso (param, x); ***** test K1 = stk_gausscov_aniso (param, x, y); ***** test K2 = stk_gausscov_aniso (param, x, y, -1); ***** test K3 = stk_gausscov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_gausscov_aniso (param, u, v, -1); K2 = stk_gausscov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); ***** error stk_gausscov_aniso (param, x, y, -2); ***** test stk_gausscov_aniso (param, x, y, -1); ***** error stk_gausscov_aniso (param, x, y, 0); ***** test stk_gausscov_aniso (param, x, y, 1); ***** test stk_gausscov_aniso (param, x, y, 2); ***** error stk_gausscov_aniso (param, x, y, 3); ***** error stk_gausscov_aniso (param, x, y, nan); ***** error stk_gausscov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_gausscov_aniso (param, x, y); K2 = stk_gausscov_aniso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_gausscov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_gausscov_aniso (param, x, y); K2 = stk_gausscov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_gausscov_aniso (param, x, y, i); dK2 = stk_gausscov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_expcov_iso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_expcov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error K = stk_expcov_iso ([param; 1.234], x, y); ***** error stk_expcov_iso (); ***** error stk_expcov_iso (param); ***** error stk_expcov_iso (param, x); ***** test stk_expcov_iso (param, x, y); ***** test stk_expcov_iso (param, x, y, -1); ***** test stk_expcov_iso (param, x, y, -1, false); ***** error stk_expcov_iso (param, x, y, -2); ***** test stk_expcov_iso (param, x, y, -1); ***** error stk_expcov_iso (param, x, y, 0); ***** test stk_expcov_iso (param, x, y, 1); ***** test stk_expcov_iso (param, x, y, 2); ***** error stk_expcov_iso (param, x, y, 3); ***** error stk_expcov_iso (param, x, y, nan); ***** error stk_expcov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_expcov_iso (param, x, y); K2 = stk_expcov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_expcov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_expcov_iso (param, x, y); K2 = stk_expcov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_expcov_iso (param, x, y, i); dK2 = stk_expcov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_expcov_aniso.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_expcov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_expcov_aniso (); ***** error K0 = stk_expcov_aniso (param); ***** error K0 = stk_expcov_aniso (param, x); ***** test K1 = stk_expcov_aniso (param, x, y); ***** test K2 = stk_expcov_aniso (param, x, y, -1); ***** test K3 = stk_expcov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_expcov_aniso (param, u, v, -1); K2 = stk_expcov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); ***** error stk_expcov_aniso (param, x, y, -2); ***** test stk_expcov_aniso (param, x, y, -1); ***** error stk_expcov_aniso (param, x, y, 0); ***** test stk_expcov_aniso (param, x, y, 1); ***** test stk_expcov_aniso (param, x, y, 2); ***** error stk_expcov_aniso (param, x, y, 3); ***** error stk_expcov_aniso (param, x, y, nan); ***** error stk_expcov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_expcov_aniso (param, x, y); K2 = stk_expcov_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_expcov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_expcov_aniso (param, x, y); K2 = stk_expcov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_expcov_aniso (param, x, y, i); dK2 = stk_expcov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_discretecov.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/stk_discretecov.m ***** shared model, model2, x0 n0 = 20; n1 = 10; dim = 4; x0 = stk_sampling_randunif (n0, dim); x1 = stk_sampling_randunif (n1, dim); model = stk_model (@stk_materncov52_aniso, dim); model.lm = stk_lm_affine (); model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); ***** test % without noise, pairwise = false model.lognoisevariance = - inf; model2 = stk_model (@stk_discretecov, model, x0); idx = [1 4 9]; [K1, P1] = stk_make_matcov (model, x0(idx, :)); [K2, P2] = stk_make_matcov (model2, idx'); assert (stk_isequal_tolrel (K1, K2)); assert (stk_isequal_tolrel (P1, P2)); ***** test % without noise, pairwise = true K1 = stk_make_matcov (model, x0([2 5 6], :), [], true); K2 = stk_make_matcov (model2, [2 5 6]', [], true); assert (stk_isequal_tolrel (K1, K2)); ***** test % with noise, pairwise = false model.lognoisevariance = log (0.01); model2 = stk_model (@stk_discretecov, model, x0); idx = [1 4 9]; [K1, P1] = stk_make_matcov (model, x0(idx, :)); [K2, P2] = stk_make_matcov (model2, idx'); assert (stk_isequal_tolrel (K1, K2)); assert (stk_isequal_tolrel (P1, P2)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_spherical.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_spherical.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_spherical (); ***** test stk_rbf_spherical (h); ***** test stk_rbf_spherical (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_spherical (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% check derivative numerically h = [-1 -0.5 -0.1 0.1 0.5 1]; delta = 1e-9; d1 = (stk_rbf_spherical (h + delta) - stk_rbf_spherical (h)) / delta; d2 = stk_rbf_spherical (h, 1); assert (stk_isequal_tolabs (d1, d2, 1e-4)); ***** assert (stk_rbf_spherical (inf) == 0) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern52.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_matern52.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_matern52 (); ***** test stk_rbf_matern52 (h); ***** test stk_rbf_matern52 (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_matern52 (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (5/2, h); y = stk_rbf_matern52 (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (5/2, h, 2); y = stk_rbf_matern52 (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_matern52 (inf) == 0) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern32.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_matern32.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_matern32 (); ***** test stk_rbf_matern32 (h); ***** test stk_rbf_matern32 (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_matern32 (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (3/2, h); y = stk_rbf_matern32 (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (3/2, h, 2); y = stk_rbf_matern32 (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_matern32 (inf) == 0) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_matern.m ***** shared nu, h, diff nu = 1.0; h = 1.0; diff = -1; ***** error stk_rbf_matern (); ***** error stk_rbf_matern (nu); ***** test stk_rbf_matern (nu, h); ***** test stk_rbf_matern (nu, h, diff); ***** test %% h = 0.0 => correlation = 1.0 for nu = 0.1:0.2:5.0, x = stk_rbf_matern (nu, 0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); end 5 tests, 5 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_gauss.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_gauss.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_gauss (); ***** test stk_rbf_gauss (h); ***** test stk_rbf_gauss (h, diff); ***** test % h = 0.0 => correlation = 1.0 x = stk_rbf_gauss (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_exponential.m] >>>>> /build/octave-stk-2.7.0/inst/covfcs/rbf/stk_rbf_exponential.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_exponential (); ***** test stk_rbf_exponential (h); ***** test stk_rbf_exponential (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_exponential (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% check derivative numerically h = [-1 -0.5 -0.1 0.1 0.5 1]; delta = 1e-9; d1 = (stk_rbf_exponential (h + delta) - stk_rbf_exponential (h)) / delta; d2 = stk_rbf_exponential (h, 1); assert (stk_isequal_tolabs (d1, d2, 1e-4)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (1/2, h); y = stk_rbf_exponential (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (1/2, h, 2); y = stk_rbf_exponential (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_exponential (inf) == 0) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/core/stk_predict_leaveoneout.m] >>>>> /build/octave-stk-2.7.0/inst/core/stk_predict_leaveoneout.m ***** shared n, x_obs, z_obs, model n = 20; x_obs = stk_sampling_regulargrid (n, 1, [0; 2*pi]); z_obs = stk_feval (@sin, x_obs); model = stk_model (@stk_materncov32_iso); model.param = log ([1; 5]); ***** test % one output loo_pred = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); ***** test % two outputs [loo_pred, loo_res] = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); assert (isequal (size (loo_res), [n 2])); assert (isequal (loo_res.colnames, {'residuals', 'norm_res'})); assert (all (isfinite (loo_res(:)))); ***** test % heteroscedastic noise case model.lognoisevariance = (1 + rand (n, 1)) * 1e-6; [loo_pred, loo_res] = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); assert (isequal (size (loo_res), [n 2])); assert (isequal (loo_res.colnames, {'residuals', 'norm_res'})); assert (all (isfinite (loo_res(:)))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/core/stk_predict.m] >>>>> /build/octave-stk-2.7.0/inst/core/stk_predict.m ***** shared n, m, model, x0, x_obs, z_obs, x_prd, y_prd1, idx_obs, idx_prd n = 10; % number of observations m = n + 1; % number of predictions d = 1; % dimension of the input space x0 = stk_sampling_regulargrid(n+m, d, [0; pi]); idx_obs = (2:2:(n+m-1))'; idx_prd = (1:2:(n+m))'; x_obs = x0(idx_obs); z_obs = sin (double (x_obs)); x_prd = x0(idx_prd); model = stk_model (@stk_materncov32_iso); model.param = log ([1.0; 2.1]); ***** error y_prd1 = stk_predict (); ***** error y_prd1 = stk_predict (model); ***** test y_prd1 = stk_predict (model, x_prd); ***** error y_prd1 = stk_predict (model, data, x_prd); ***** test y_prd1 = stk_predict (model, x_obs, z_obs, x_prd); ***** error y_prd1 = stk_predict (model, [x_obs; x_obs], [z_obs; z_obs], x_prd); ***** test % nargout = 2 [y_prd1, lambda] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); ***** test % nargout = 2, compute only variances [y_prd1, lambda] = stk_predict (model, x_obs, [], x_prd); assert (isequal (size (lambda), [n m])); assert (all (isnan (y_prd1.mean))); ***** test % nargout = 3 [y_prd1, lambda, mu] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging ***** test % nargout = 4 [y_prd1, lambda, mu, K] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging assert (isequal (size (K), [m m])); ***** test % predict on large set of locations x_prd = stk_sampling_regulargrid (1e5, 1, [0; pi]); y_prd = stk_predict (model, x_obs, z_obs, x_prd); ***** test % predict on an observation point % https://sourceforge.net/p/kriging/tickets/49/ [zp, lambda] = stk_predict (model, x_obs, z_obs, x_obs(4)); assert (isequal (z_obs(4), zp.mean)) assert (isequal (zp.var, 0)) lambda_ref = zeros (n, 1); lambda_ref(4) = 1; assert (isequal (lambda, lambda_ref)) 12 tests, 12 passed, 0 known failure, 0 skipped [inst/core/stk_model_update.m] >>>>> /build/octave-stk-2.7.0/inst/core/stk_model_update.m ***** test x1 = (linspace (0, 1, 15))'; z1 = sin (x1); x2 = (linspace (2, 3, 15))'; z2 = sin (x2); xt = (linspace (1, 2, 15))'; zt = sin (xt); % Prior model M0 = stk_model (@stk_materncov32_iso); M0.param = log ([1.0; 2.1]); M1 = stk_model_update (M0, x1, z1); M1 = stk_model_update (M1, x2, z2); % this calls @stk_model_gpposterior/... zp1 = stk_predict (M1, xt); M2 = stk_model_gpposterior (M0, [x1; x2], [z1; z2]); zp2 = stk_predict (M2, xt); assert (stk_isequal_tolabs (double (zp2 - zp1), zeros (15, 2), 1e-10)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/core/stk_make_matcov.m] >>>>> /build/octave-stk-2.7.0/inst/core/stk_make_matcov.m ***** shared model, model2, x0, x1, n0, n1, d, Ka, Kb, Kc, Pa, Pb, Pc n0 = 20; n1 = 10; d = 4; model = stk_model (@stk_materncov52_aniso, d); model.lm = stk_lm_affine; model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); model2 = model; model2.lognoisevariance = log(0.01); x0 = stk_sampling_randunif (n0, d); x1 = stk_sampling_randunif (n1, d); ***** error [KK, PP] = stk_make_matcov (); ***** error [KK, PP] = stk_make_matcov (model); ***** test [Ka, Pa] = stk_make_matcov (model, x0); % (1) ***** test [Kb, Pb] = stk_make_matcov (model, x0, x0); % (2) ***** test [Kc, Pc] = stk_make_matcov (model, x0, x1); % (3) ***** error [KK, PP] = stk_make_matcov (model, x0, x1, pi); ***** assert (isequal (size (Ka), [n0 n0])); ***** assert (isequal (size (Kb), [n0 n0])); ***** assert (isequal (size (Kc), [n0 n1])); ***** assert (isequal (size (Pa), [n0 d + 1])); ***** assert (isequal (size (Pb), [n0 d + 1])); ***** assert (isequal (size (Pc), [n0 d + 1])); ***** assert (isequal (Kb, Ka)); ***** test [Ka, Pa] = stk_make_matcov (model2, x0); % (1') ***** test [Kb, Pb] = stk_make_matcov (model2, x0, x0); % (2') ***** error assert (isequal (Kb, Ka)); ***** assert (isequal (Pa, Pb)); ***** assert (isequal (Pa, Pc)); 18 tests, 18 passed, 0 known failure, 0 skipped [inst/core/stk_cholcov.m] >>>>> /build/octave-stk-2.7.0/inst/core/stk_cholcov.m ***** shared Q, K, L, U, epsi Q = 0.25 * hadamard(4); ***** test K = Q * diag ([1, 0.1, 0.01, 1e-7]) * Q'; [U, epsi] = stk_cholcov (K); ***** assert (istriu (U)) ***** assert (epsi == 0) ***** test K = Q * diag ([1, 0.1, 0.01, 1e-7]) * Q'; [L, epsi] = stk_cholcov (K, 'lower'); ***** assert (istril (L)) ***** assert (epsi == 0) ***** test K = Q * diag ([1, 0.1, 0.01, -1e-7]) * Q'; [U, epsi] = stk_cholcov (K); ***** assert (istriu (U)) ***** assert (epsi > 0) ***** test K = Q * diag ([1, 0.1, 0.01, -1e-7]) * Q'; [L, epsi] = stk_cholcov (K, 'lower'); ***** assert (istril (L)) ***** assert (epsi > 0) 12 tests, 12 passed, 0 known failure, 0 skipped [inst/core/@stk_kreq_qr/stk_kreq_qr.m] >>>>> /build/octave-stk-2.7.0/inst/core/@stk_kreq_qr/stk_kreq_qr.m ***** test stk_test_class ('stk_kreq_qr') 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_rescale.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_rescale.m ***** shared x x = rand (10, 4); y = stk_rescale (x, [], []); assert (stk_isequal_tolabs (x, y)); ***** test y = stk_rescale(0.5, [], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 1], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 2], []); assert (stk_isequal_tolabs (y, 0.25)); ***** test y = stk_rescale (0.5, [0; 2], [0; 1]); assert (stk_isequal_tolabs (y, 0.25)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_normalize.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_normalize.m ***** shared x, box, y1, y2, y3, y4 n = 5; box = [2; 3]; x = box(1) + diff (box) * rand (n, 1); ***** error y1 = stk_normalize (); ***** test y2 = stk_normalize (x); ***** test y3 = stk_normalize (x, box); ***** test assert (~ any ((y2 < -10 * eps) | (y2 > 1 + 10 * eps))); ***** test assert (~ any ((y3 < -10 * eps) | (y3 > 1 + 10 * eps))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_length.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_length.m ***** assert (isequal (stk_length ([1 2; 3 4; 5 6]), 3)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_get_sample_size.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_get_sample_size.m ***** assert (stk_get_sample_size ([1 2; 3 4; 5 6]) == 3); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_feval.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_feval.m ***** shared f, xt f = @(x)(- (0.7 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); xt = stk_sampling_regulargrid (20, 1, [0; 1]); ***** error yt = stk_feval (); ***** error yt = stk_feval (f); ***** test yt = stk_feval (f, xt); ***** test yt = stk_feval (f, xt, false); ***** test yt = stk_feval (f, xt, false, false); ***** test yt = stk_feval (f, xt, false, false, false); ***** test N = 15; xt = stk_sampling_regulargrid (N, 1, [0; 1]); yt = stk_feval (f, xt); assert (isequal (size (yt), [N 1])); ***** test x = stk_dataframe ([1; 2; 3], {'x'}, {'a'; 'b'; 'c'}); y = stk_feval (@(u)(2 * u), x); assert (isequal (y.data, [2; 4; 6])); assert (isequal (y.rownames, {'a'; 'b'; 'c'})); ***** shared t, z_ref, n n = 20; t = stk_sampling_regulargrid (n, 1, [0; 2*pi]); z_ref = [sin(t.data) cos(t.data)]; ***** test t.colnames = {'time'}; z = stk_feval ({@sin, @cos}, t); assert (isa (z, 'stk_dataframe')); assert (isequal (z.data, z_ref)); ***** test F = @(x)([sin(x) cos(x)]); z = stk_feval (F, t); assert (isequal (z.data, z_ref)); ***** test t = stk_sampling_regulargrid (n, 1, [0; 2*pi]); F = {'sin', 'cos'}; z = stk_feval (F, t); assert (isequal (z.data, [sin(t.data) cos(t.data)])); assert (isequal (z.colnames, {'sin' 'cos'})); ***** test % vectorized F = @(t)([sin(t) cos(t)]); G = @(t)(0.365 * t.^2 + (cos ((t - 1).*(t - 2) + 0.579033))); z = stk_feval ({@sin, @cos, G, F, 'tan'}, t); assert (isequal (z.colnames, {'sin' 'cos' 'F3' 'F4_1' 'F4_2' 'tan'})); ***** test % not vectorized F = @(t)([sin(t) cos(t)]); G = @(t)(0.365 * t^2 + (cos ((t - 1)*(t - 2) + 0.579033))); z = stk_feval ({@sin, @cos, G, F, 'tan'}, t, [], [], false); assert (isequal (z.colnames, {'sin' 'cos' 'F3' 'F4_1' 'F4_2' 'tan'})); 13 tests, 13 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_boundingbox.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/generic/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = [0 3 2; 1 4 1; 7 0 2]; ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y.data, [0 0 1; 7 4 2])); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/vertcat.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/vertcat.m ***** shared d, x, y d = 10; x = stk_hrect (d); y = double (x); ***** test z = vertcat (x, x); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); ***** test z = vertcat (x, y); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); ***** test z = vertcat (y, x); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/subsref.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/subsref.m ***** test B = stk_hrect ([0 0 0 0; 1 2 3 4]); B = B(:, [1 3 4]); assert (strcmp (class (B), 'stk_hrect')); assert (isequal (double (B), [0 0 0; 1 3 4])); ***** test B = stk_hrect ([0 0 0 0; 1 2 3 4]); B = B(1, :); assert (strcmp (class (B), 'stk_dataframe')); assert (isequal (double (B), [0 0 0 0])); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_rescale.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/stk_rescale.m ***** shared x x = rand (10, 4); y = stk_rescale (x, [], []); assert (stk_isequal_tolabs (x, y)); ***** test y = stk_rescale(0.5, [], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 1], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 2], []); assert (stk_isequal_tolabs (y, 0.25)); ***** test y = stk_rescale (0.5, [0; 2], [0; 1]); assert (stk_isequal_tolabs (y, 0.25)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_normalize.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/stk_normalize.m ***** shared x, box, y1, y2, y3, y4 n = 5; box = stk_hrect ([2; 3]); x = 2 + rand (n, 1); ***** error y1 = stk_normalize (); ***** test y2 = stk_normalize (x); ***** test y3 = stk_normalize (x, box); ***** test assert (~ any ((y2 < -10 * eps) | (y2 > 1 + 10 * eps))); ***** test assert (~ any ((y3 < -10 * eps) | (y3 > 1 + 10 * eps))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_hrect.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/stk_hrect.m ***** test stk_test_class ('stk_hrect') ***** shared dom ***** test dom = stk_hrect ([-1; 1], {'x'}); ***** assert (isequal (dom.colnames, {'x'})) ***** assert (isequal (dom.rownames, {'lower_bounds'; 'upper_bounds'})) ***** assert (isequal (dom.data, [-1; 1])) 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_dataframe.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/stk_dataframe.m ***** shared x, cn, rn, y, cn2, rn2 cn = {'x' 'y'}; rn = {'lower_bounds'; 'upper_bounds'}; x = stk_hrect ([0 0; 1 1], cn); cn2 = {'xx' 'yy'}; rn2 = {'aa'; 'bb'}; ***** test y = stk_dataframe (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, [], rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, {}, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, {})) ***** assert (isequal (y.rownames, rn2)) 20 tests, 20 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_boundingbox.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/stk_boundingbox.m ***** shared x, y lb = rand (1, 5); ub = lb + 1; cn = {'a', 'b', 'c', 'd', 'e'}; x = stk_hrect ([lb; ub], cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, x)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/ismember.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/ismember.m ***** shared n, box n = 5; box = stk_hrect (n); ***** assert (ismember (box(1, :), box)) ***** assert (ismember (box(2, :), box)) ***** assert (ismember (.5 * ones (1, 5), box)) ***** assert (~ ismember (box(1, :) - 1, box)) ***** assert (~ ismember (box(2, :) + 1, box)) ***** test y = double (box); y = [y; y + 2]; assert (isequal (ismember (y, box), [1; 1; 0; 0])) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/horzcat.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_hrect/horzcat.m ***** shared d, x1, x2, x3 d = 10; x1 = stk_hrect (d); x2 = double (x1); x3 = [1:d; 0:(d-1)]; % illegal bounds ***** test y1 = horzcat (x1, x1); assert (isequal (size (y1), [2 2*d])); assert (strcmp (class (y1), 'stk_hrect')); ***** test y2 = horzcat (x1, x2); assert (isequal (size (y2), [2 2*d])); assert (strcmp (class (y2), 'stk_hrect')); ***** test y3 = horzcat (x2, x1); assert (isequal (size (y3), [2 2*d])); assert (strcmp (class (y3), 'stk_hrect')); ***** test lastwarn ('') y4 = horzcat (x1, x3); assert (isequal (size (y4), [2 2*d])); assert (strcmp (class (y4), 'stk_dataframe')); [warn_msg, warn_id] = lastwarn (); assert (strcmp (warn_id, 'STK:stk_hrect:horzcat:IllegalBounds')) warning: Illegal bounds, the result is not an stk_hrect object. warning: called from horzcat at line 47 column 9 __test__ at line 4 column 5 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 1174 column 31 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/uminus.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/uminus.m ***** test x = stk_factorialdesign ({1:3, 1:2}); y = stk_factorialdesign ({-(1:3), -(1:2)}); assert (isequal (-x, y)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_rescale.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/stk_rescale.m ***** test x = stk_factorialdesign ({[1 2], [5 6]}); y = stk_factorialdesign ({[0 3], [0 3]}); z = stk_rescale (x, [1 5; 2 6], [0 0; 3 3]); assert (stk_isequal_tolabs (y, z)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_normalize.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/stk_normalize.m ***** test x = stk_factorialdesign ({[1 2], [5 6]}); y = stk_factorialdesign ({[0 1], [0 1]}); assert (stk_isequal_tolabs (stk_normalize (x), y)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_factorialdesign.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/stk_factorialdesign.m ***** test stk_test_class ('stk_factorialdesign') ***** test % constructor with two factors + column names x = stk_factorialdesign ({[0 1], [1 2 3]}, {'a', 'b'}); assert (isequal(x.colnames, {'a', 'b'})); assert (isequal(get (x, 'colnames'), {'a', 'b'})); ***** error stk_factorialdesign ('bouh'); ***** error stk_factorialdesign ({{'a' 'b'}}); ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_sampling_regulargrid (3^2, 2); ***** test format rat; disp (x); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test format long; disp (x); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test format short; disp (x); format (fmt); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test disp (stk_sampling_regulargrid (0^1, 1)); Empty data frame with 0 rows and 0 columns ***** test disp (stk_sampling_regulargrid (0^2, 2)); Empty data frame with 0 rows and 0 columns ***** test display (x); x = <9x2 stk_factorialdesign array> : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** error length (stk_sampling_regulargrid (7^2, 2)) % not defined ***** shared x x = stk_factorialdesign ({[0 1], [0 1]}); ***** assert (isequal (x(2:end, :), x(2:4, :))) ***** assert (isequal (x(2, 1:end), x(2, :))) ***** assert (isequal (x(2:end, 2:end), x(2:4, 2))) ***** error x(1:end, 1:end, 1:end) ***** shared x, y x = stk_sampling_regulargrid (3^2, 2); y = x; ***** test %%%% vercat z = vertcat (x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x); double(y)])); ***** test %%%% same thing, using cat(1, ...) z = cat (1, x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x); double(y)])); ***** test %%%% horzcat y.colnames = {'y1' 'y2'}; z = horzcat (x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x) double(y)])); ***** test %%%% same thing, using cat (2, ...) z = cat (2, x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x) double(y)])); ***** error cat (3, x, y) ***** shared x, t x = stk_sampling_regulargrid (3^2, 2); t = double (x); ***** assert (isequal (apply (x, 1, @sum), sum (t, 1))) ***** assert (isequal (apply (x, 2, @sum), sum (t, 2))) ***** error u = apply (x, 3, @sum); ***** assert (isequal (apply (x, 1, @min, []), min (t, [], 1))) ***** assert (isequal (apply (x, 2, @min, []), min (t, [], 2))) ***** error u = apply (x, 3, @min, []); ***** assert (isequal (min (x), min (t))) ***** assert (isequal (max (x), max (t))) ***** assert (isequal (std (x), std (t))) ***** assert (isequal (var (x), var (t))) ***** assert (isequal (sum (x), sum (t))) ***** assert (isequal (mean (x), mean (t))) ***** assert (isequal (mode (x), mode (t))) ***** assert (isequal (prod (x), prod (t))) ***** assert (isequal (median (x), median (t))) ***** shared x1, x2, x3, u1, u2, u3 x1 = stk_sampling_regulargrid ([4 3], 2); u1 = double (x1); x2 = stk_sampling_regulargrid ([3 4], 2); u2 = double (x2); x3 = x1 + 1; u3 = u1 + 1; ***** test z = bsxfun (@plus, x1, u2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = bsxfun (@plus, u1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = bsxfun (@plus, x1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = min (x1, x2); assert (isequal (double (z), min (u1, u2))); ***** test z = max (x1, x2); assert (isequal (double (z), max (u1, u2))); ***** error z = min (x1, x2, 1); ***** error z = max (x1, x2, 1); ***** test z = x1 + x2; assert (isequal (double (z), u1 + u2)); ***** test z = x1 - x2; assert (isequal (double (z), u1 - u2)); ***** test z = x1 .* x2; assert (isequal (double (z), u1 .* u2)); ***** test z = x3 .\ x2; assert (isequal (double (z), u3 .\ u2)); ***** test z = x2 ./ x3; assert (isequal (double (z), u2 ./ u3)); ***** test z = x3 .^ x2; assert (isequal (double (z), u3 .^ u2)); ***** test z = realpow (x3, x2); assert (isequal (double (z), realpow (u3, u2))); ***** test z = (x1 == x2); assert (isequal (double (z), (u1 == u2))); ***** test z = (x1 ~= x2); assert (isequal (double (z), (u1 ~= u2))); ***** test z = (x1 <= x2); assert (isequal (double (z), (u1 <= u2))); ***** test z = (x1 >= x2); assert (isequal (double (z), (u1 >= u2))); ***** test z = (x1 < x2); assert (isequal (double (z), (u1 < u2))); ***** test z = (x1 > x2); assert (isequal (double (z), (u1 > u2))); ***** test z = x1 & x2; assert (isequal (double (z), u1 & u2)); ***** test z = x1 | x2; assert (isequal (double (z), u1 | u2)); ***** test z = xor (x1, x2); assert (isequal (double (z), xor (u1, u2))); ***** shared x x = stk_factorialdesign ({[0 1], [0 1 2]}); ***** assert (strcmp (class (x'), 'stk_dataframe')) ***** assert (strcmp (class (x.'), 'stk_dataframe')) 60 tests, 60 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_dataframe.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/stk_dataframe.m ***** shared x, cn, rn, y, cn2, rn2 cn = {'x' 'y'}; rn = {'a'; 'b'; 'c'; 'd'}; x = stk_factorialdesign ({1:2, 1:2}, cn, rn); cn2 = {'xx' 'yy'}; rn2 = {'aa'; 'bb'; 'cc'; 'dd'}; ***** test y = stk_dataframe (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, [], rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, {}, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, {})) ***** assert (isequal (y.rownames, rn2)) 20 tests, 20 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_boundingbox.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = stk_factorialdesign ({[1 2], [3 4 5], [0 2 8]}, cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, stk_hrect ([1 3 0; 2 5 8], cn))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/ndgrid.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/ndgrid.m ***** shared data data = stk_factorialdesign ({[0 1], [5 6 7]}); ***** test % nargout = 0 ndgrid (data); assert (isequal (ans, [0 0 0; 1 1 1])); ***** test % nargout = 1 x = ndgrid (data); assert (isequal (x, [0 0 0; 1 1 1])); ***** test % nargout = 2 [x, y] = ndgrid (data); assert (isequal ({x, y}, {[0 0 0; 1 1 1], [5 6 7; 5 6 7]})); ***** error % nargout = 3 [x, y, z] = ndgrid (data); ***** test data = stk_factorialdesign ({[], []}); [x, y] = ndgrid (data); assert (isequal ({x, y}, {[], []})); ***** test data = stk_factorialdesign ({[1:3]}); x = ndgrid (data); assert (isequal (x, [1; 2; 3])); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/ismember.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/ismember.m ***** shared A, B, BB, b i_max = 10; n = 100; d = 5; A = randi (i_max, n, d); levels = repmat ({1:i_max}, 1, d); levels{4} = 1:2:i_max; B = stk_factorialdesign (levels); BB = double (B); ***** test b = ismember (A, B); ***** assert (isequal (b, ismember (A, BB))); ***** test b = ismember (A, B, 'rows'); ***** assert (isequal (b, ismember (A, BB, 'rows'))); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/fieldnames.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_factorialdesign/fieldnames.m ***** test x = stk_factorialdesign ({0:1, 3:5}, {'u' 'v'}); fn1 = sort (fieldnames (x)); fn2 = {'colnames'; 'data'; 'info'; 'levels'; ... 'rownames'; 'sample_size'; 'stk_dataframe'; 'u'; 'v'}; assert (isequal (fn1, fn2)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/vertcat.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/vertcat.m ***** shared u, v u = rand (3, 2); v = rand (3, 2); ***** test x = stk_dataframe (u); y = stk_dataframe (v); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % the same, with row names this time x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); y = stk_dataframe (v, {}, {'d'; 'e'; 'f'}); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); assert (all (strcmp (z.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'}))); ***** test % the same, with row names only for the first argument x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); y = stk_dataframe (v); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % incompatible variable names u = rand (3, 1); x = stk_dataframe (u, {'x'}); v = rand (3, 1); y = stk_dataframe (v, {'y'}); z = vertcat (x, y); assert (isequal (z.colnames, {})); warning: Incompatible column names ! The output of vertcat will have no column names. warning: called from vertcat at line 82 column 9 __test__ at line 5 column 4 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 1254 column 31 ***** test x = stk_dataframe (u); z = vertcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % the same, with row names for the first argument x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); z = vertcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test y = stk_dataframe (v); z = vertcat (u, y); assert (isa (z, 'stk_dataframe') && (isequal (double (z), [u; v]))); ***** test x = stk_dataframe (u); y = stk_dataframe (v); z = vertcat (x, y, u, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v; u; v])); ***** shared x, y x = stk_dataframe (rand (2, 3), {'a', 'b', 'c'}); y = stk_dataframe (rand (3, 2), {'a', 'b'}); y = horzcat (y, rand(3, 1)); % last column name is missing ***** test z = vertcat (x, y); assert (isequal (z.colnames, {'a' 'b' 'c'})) ***** test z = vertcat (y, x); assert (isequal (z.colnames, {'a' 'b' 'c'})) 10 tests, 10 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/var.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/var.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (var(df1), var(x1))) ***** assert (isequal (var(df1, 0, 1), var(x1))) ***** assert (isequal (var(df1, 0, 2), var(x1, 0, 2))) ***** assert (isequal (var(df1, 1), var(x1, 1))) ***** assert (isequal (var(df1, 1, 1), var(x1, 1))) ***** assert (isequal (var(df1, 1, 2), var(x1, 1, 2))) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/unique.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/unique.m ***** test cn = {'u' 'v' 'w'}; x = stk_dataframe (rand (4, 3), cn); y = [x; x]; z = unique (y, 'rows'); assert (isequal (z.colnames, cn)); assert (isequal (z.data, unique (x.data, 'rows'))); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/transpose.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/transpose.m ***** test u = rand(3, 2) + 1i * rand(3, 2); data = stk_dataframe(u, {'x' 'y'}, {'obs1'; 'obs2'; 'obs3'}); data = data.'; assert (isa(data, 'stk_dataframe') && isequal(double(data), u.')); assert (isequal(data.rownames, {'x'; 'y'})); assert (isequal(data.colnames, {'obs1' 'obs2' 'obs3'})); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/times.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/times.m ***** test stk_test_dfbinaryop(@times, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@times, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@times, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tanh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/tanh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tanh (x); assert (strcmp (class (v), class (u)) && isequal (v, tanh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tand.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/tand.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tand (x); assert (strcmp (class (v), class (u)) && isequal (v, tand (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tan.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/tan.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tan (x); assert (strcmp (class (v), class (u)) && isequal (v, tan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sum.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sum.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (sum(df1), sum(x1))) ***** assert (isequal (sum(df1, 1), sum(x1))) ***** assert (isequal (sum(df1, 2), sum(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/subsref.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/subsref.m ***** shared x, s, t, data x = stk_dataframe(rand(3, 2)); s = {'a'; 'b'; 'c'}; t = {'xx' 'yy'}; ***** test x = set(x, 'rownames', s); assert (isequal (x.rownames, s)) assert (isequal (x.rownames{2}, 'b')) ***** test x = set(x, 'colnames', t); assert (isequal (x.rownames, s)) assert (isequal (x.colnames, t)) assert (isequal (x.colnames{2}, 'yy')) ***** shared u, data u = rand(3, 2); data = stk_dataframe(u, {'x1', 'x2'}); ***** assert (isequal (data.x2, u(:, 2))) ***** assert (data.x2(3) == u(3, 2)) ***** error t = data.toto; ***** error t = data(1, 1).zzz; % illegal multilevel indexing ***** error t = data(1, 1, 1); % too many indices ***** error t = data{1}; % curly braces not allowed ***** test % select rows and columns x = stk_dataframe (reshape (1:15, 5, 3), {'u' 'v' 'w'}); assert (isequal (x([3 5], 2), stk_dataframe ([8; 10], {'v'}))); ***** shared u, data u = rand(3, 1); data = stk_dataframe(u, {'x'}); ***** assert (isequal (data.x, u)) ***** assert (isequal (double (data), u)) ***** assert (isequal (double (data(2)), u(2))) ***** assert (isequal (double (data(3, 1)), u(3))) ***** error t = data(1, 1, 1); % too many indices ***** test x = stk_dataframe (randn (2, 2), {'u' 'v'}); y = x ([], :); assert (isa (y, 'stk_dataframe')); assert (isequal (size (y), [0 2])); assert (isequal (y.colnames, {'u' 'v'})); ***** test x = stk_dataframe (randn (2, 2), [], {'a' 'b'}); y = x (:, []); assert (isa (y, 'stk_dataframe')); assert (isequal (size (y), [2 0])); assert (isequal (y.rownames, {'a'; 'b'})); 16 tests, 16 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/subsasgn.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/subsasgn.m ***** shared x, s, t, data x = stk_dataframe (rand (3, 2)); s = {'a'; 'b'; 'c'}; t = {'xx' 'yy'}; ***** test x.rownames = s; assert (isequal (get (x, 'rownames'), s)) ***** test x.colnames = t; assert (isequal (get (x, 'rownames'), s)) assert (isequal (get (x, 'colnames'), t)) ***** test x.rownames{2} = 'dudule'; assert (isequal (get (x, 'rownames'), {'a'; 'dudule'; 'c'})) assert (isequal (get (x, 'colnames'), t)) ***** test x.colnames{1} = 'martha'; assert (isequal (get (x, 'rownames'), {'a'; 'dudule'; 'c'})) assert (isequal (get (x, 'colnames'), {'martha' 'yy'})) ***** test data = stk_dataframe (zeros(3, 2), {'x1' 'x2'}); u = rand(3, 1); data.x2 = u; assert (isequal (double (data), [zeros(3, 1) u])) ***** test data = stk_dataframe (zeros (3, 2), {'x1' 'x2'}); data.x2(3) = 27; assert (isequal (double (data), [0 0; 0 0; 0 27])) ***** error data.toto = rand (3, 1); ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), {'u' 'v' 'w'}); ***** test x(:, 2) = []; assert (isequal (size (x), [4 2])) assert (isequal (double (x), [1 9; 2 10; 3 11; 4 12])) assert (isequal (get (x, 'colnames'), {'u' 'w'})) assert (isempty (get (x, 'rownames'))) ***** test x(2, :) = []; assert (isequal (size (x), [3 2])) assert (isequal (double (x), [1 9; 3 11; 4 12])) assert (isempty (get (x, 'rownames'))) ***** test x.rownames = {'a'; 'b'; 'c'}; x(2, :) = []; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 9; 4 12])) assert (isequal (x.rownames, {'a'; 'c'})) ***** test % change one value with matrix-style indexing x(1, 2) = 11; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 11; 4 12])) ***** test % change one value with linear indexing x(3) = 13; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 13; 4 12])) ***** assert (isequal (double (x(:, :)), [1 13; 4 12])); ***** test % assignment to a variable that doesn't exist A = stk_dataframe (7.1); clear B; B(2) = A; assert (strcmp (class (B), 'stk_dataframe')) assert (isequal (B.data, [0 7.1])); ***** test % repmat x = stk_dataframe (1); y = repmat (x, 2, 3); assert (isa (y, 'stk_dataframe')); assert (isequal (y.data, ones (2, 3))); ***** test x(:, :) = []; assert (isempty (x)); ***** test % Delete the only row of a one-row dataframe y1 = stk_dataframe ([1.2 3.33], {'mean', 'var'}); y1(1, :) = []; % Remove the only row of data assert (isequal (size (y1), [0 2])) assert (isequal (y1.colnames, {'mean', 'var'})) y11 = get (y1, 'mean'); assert (isempty (y11)); ***** error x{1} = 2; ***** error x(1, 2) = []; ***** error x(1, 2).a = 3; ***** shared x x = stk_dataframe((1:5)'); ***** test x(2) = 0; assert (isequal (double (x), [1; 0; 3; 4; 5])); ***** test x(3) = []; assert (isequal (double (x), [1; 0; 4; 5])); ***** test x(3, 1) = 0; assert (isequal(double(x), [1; 0; 0; 5])); ***** error x(3, 1, 1) = 297; ***** test % create a new row and a new column through subsasgn() x = stk_dataframe (rand (5, 2)); x(6, 3) = 7; assert(isequal(size(x), [6, 3])); ***** test x = stk_dataframe ([]); x.colnames{2} = 'v'; x.rownames{2} = 'b'; assert (isequal (x.rownames, {''; 'b'})); assert (isequal (x.colnames, {'' 'v'})); assert (isequal (size (x.data), [2 2]) && (all (isnan (x.data(:))))) ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), {'u' 'v' 'w'}); ***** test % change one column using ':', plain numeric argument y = [0; 9; 0; 9]; z = x; z(:, 2) = y; assert (isequal (z(:, 1), x(:, 1))); assert (isequal (z(:, 2).data, y)); ***** test % change one column using ':', skt_dataframe argument y = stk_dataframe ([0; 9; 0; 9], {'y'}); z = x; z(:, 2) = y; assert (isequal (z(:, 1), x(:, 1))); assert (isequal (z(:, 2), y)); ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), [], {'a'; 'b'; 'c'; 'd'}); ***** test % change one row using ':', plain numeric argument y = [7 7 7]; z = x; z(3, :) = y; assert (isequal (z(1, :), x(1, :))); assert (isequal (z(3, :).data, y)); ***** test % change one row using ':', skt_dataframe argument y = stk_dataframe ([7 7 7], [], {'y'}); z = x; z(3, :) = y; assert (isequal (z(1, :), x(1, :))); assert (isequal (z(3, :), y)); ***** shared x x = stk_dataframe (zeros (2), {'u' 'v'}); ***** test % first column x(1:2) = 1; y = stk_dataframe ([1 0; 1 0], {'u' 'v'}); assert (isequal (x, y)); ***** test % one more element x(1:3) = 2; y = stk_dataframe ([2 2; 2 0], {'u' 'v'}); assert (isequal (x, y)); ***** error % too many elements x(1:5) = 3; ***** shared x x = stk_dataframe (randn (3, 3)); ***** test x.colnames{2} = 'y'; ***** assert (isequal (x.colnames, {'' 'y' ''})); ***** test x.rownames{2} = 'b'; ***** assert (isequal (x.rownames, {''; 'b'; ''})); 37 tests, 37 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_sprintf.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_sprintf.m ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_dataframe (rand (3, 2)); ***** test format rat; disp (x); : -------- -------- * : 0.213763 0.100376 * : 0.552748 0.984805 * : 0.709507 0.270184 ***** test format long; disp (x); : ---------------- ---------------- * : 0.21376325171485 0.10037644806830 * : 0.55274843006769 0.98480495718026 * : 0.70950684214635 0.27018397579202 ***** test format short; disp (x); format (fmt); : -------- -------- * : 0.213763 0.100376 * : 0.552748 0.984805 * : 0.709507 0.270184 ***** test disp (stk_dataframe (zeros (0, 1))) Empty data frame with 0 rows and 0 columns ***** test disp (stk_dataframe (zeros (0, 2))) Empty data frame with 0 rows and 0 columns 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_rescale.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_rescale.m ***** test u = rand(5, 1) * 2; x = stk_dataframe(u); y = stk_rescale(x, [0; 2], [0; 3]); assert (isa (y, 'stk_dataframe') && isequal(double(y), u * 3/2)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_normalize.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_normalize.m ***** test u = rand (6, 2) * 2; x = stk_dataframe (u); y = stk_normalize (x); assert (isa (y, 'stk_dataframe') ... && stk_isequal_tolabs (double (y), stk_normalize (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_length.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_length.m ***** test x = stk_dataframe ([1 2; 3 4; 5 6]); assert (isequal (stk_length (x), 3)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_get_sample_size.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_get_sample_size.m ***** test x = stk_dataframe ([1 2; 3 4; 5 6]); assert (isequal (stk_get_sample_size (x), 3)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_dataframe.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_dataframe.m ***** test stk_test_class ('stk_dataframe') ***** test % default constructor x = stk_dataframe (); assert (isa (x, 'stk_dataframe') && isequal (size (x), [0 0])) ***** test y = stk_dataframe (rand (3, 2)); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) ***** test y = stk_dataframe (rand (3, 2), {'x', 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) ***** test y = stk_dataframe (rand (3, 2), {'x', 'y'}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) ***** error x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, pi); ***** error x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {}, pi); ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {'x' 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {'x' 'y'}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2), {'x' 'y'}); y = stk_dataframe (x, [], {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2), {'x' 'y'}); y = stk_dataframe (x, {}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {'x' 'y'}); y = stk_dataframe (x, [], {'a' 'b' 'c' 'd' 'e' 'f'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x, {'x' 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x, {'x' 'y'}, []); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {'x' 'y'}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** error x = stk_factorialdesign ({1:3, 1:2}); y = stk_dataframe (x, pi); ***** error x = stk_factorialdesign ({1:3, 1:2}); y = stk_dataframe (x, {}, pi); ***** test x = stk_dataframe ([], {'a', 'b'}); assert (isequal (size (x), [0 2])) assert (isequal (x.colnames, {'a' 'b'})); assert (isequal (x.rownames, {})); ***** test x = stk_dataframe ([], {'a', 'b'}, {'toto'}); assert (isequal (size (x), [1 2])) assert (isequal (x.colnames, {'a' 'b'})); assert (isequal (x.rownames, {'toto'})); ***** shared x ***** test x = stk_dataframe (randn (10, 1), 'NOx'); assert (isequal (x.colnames, {'NOx'})); ***** test y = stk_dataframe (x, 'toto'); assert (isequal (y.colnames, {'toto'})); ***** test x = stk_dataframe (randn (1, 2), {}, 'aaa'); assert (isequal (x.rownames, {'aaa'})); ***** test y = stk_dataframe (x, {}, 'tata'); assert (isequal (y.rownames, {'tata'})); 24 tests, 24 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_boundingbox.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = stk_dataframe ([0 3 2; 1 4 1; 7 0 2], cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, stk_hrect ([0 0 1; 7 4 2], cn))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/std.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/std.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (std(df1), std(x1))) ***** assert (isequal (std(df1, 0, 1), std(x1))) ***** assert (isequal (std(df1, 0, 2), std(x1, 0, 2))) ***** assert (isequal (std(df1, 1), std(x1, 1))) ***** assert (isequal (std(df1, 1, 1), std(x1, 1))) ***** assert (isequal (std(df1, 1, 2), std(x1, 1, 2))) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sqrt.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sqrt.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sqrt (x); assert (strcmp (class (v), class (u)) && isequal (v, sqrt (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sort.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sort.m ***** shared x, y x = stk_dataframe ([3; 2; 1], {}, {'a', 'b', 'c'}); y = sort (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.data, [1; 2; 3])) ***** assert (isequal (y.rownames, {'c'; 'b'; 'a'})) ***** error y = sort (x, []); ***** assert (isequal (sort (x, 1), y)) ***** assert (isequal (sort (x, 2), x)) ***** error sort (x, 3) ***** error y = sort (x, [], 'ascend'); ***** assert (isequal (sort (x, 1, 'ascend'), y)) ***** assert (isequal (sort (x, 2, 'ascend'), x)) ***** error y = sort (x, 3, 'ascend'); ***** error y = sort (x, [], 'descend'); ***** assert (isequal (sort (x, 1, 'descend'), x)) ***** assert (isequal (sort (x, 2, 'descend'), x)) ***** error sort (x, 3, 'descend') 15 tests, 15 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/size.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/size.m ***** shared x x = stk_dataframe([1 2; 3 4; 5 6]); ***** assert (isequal (size(x), [3 2])) ***** assert (numel(x) == 1) ***** assert (ndims(x) == 2) ***** test size(x); % force exploration of branch nargout == 0 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sinh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sinh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sinh (x); assert (strcmp (class (v), class (u)) && isequal (v, sinh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sind.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sind.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sind (x); assert (strcmp (class (v), class (u)) && isequal (v, sind (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sin.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/sin.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sin (x); assert (strcmp (class (v), class (u)) && isequal (v, sin (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/reshape.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/reshape.m ***** test x = stk_dataframe (randn (10, 3)); y = reshape (x, 5, 6); assert (isa (y, 'stk_dataframe') && isequal (size (y), [5 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/realpow.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/realpow.m ***** test stk_test_dfbinaryop(@realpow, rand(7, 2), .1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@realpow, rand(7, 2), .1); ***** error stk_test_dfbinaryop(@realpow, rand(7, 2), .1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/rdivide.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/rdivide.m ***** test stk_test_dfbinaryop(@rdivide, rand(7, 2), 1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@rdivide, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@rdivide, rand(7, 2), 1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/quantile.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/quantile.m ***** shared x1, df1, p x1 = rand (9, 3); df1 = stk_dataframe (x1, {'a', 'b', 'c'}); p = 0.95; ***** assert (isequal (quantile (df1, p), quantile (x1, p))) ***** assert (isequal (quantile (df1, p, 1), quantile (x1, p))) ***** assert (isequal (quantile (df1, p, 2), quantile (x1, p, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/prod.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/prod.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (prod(df1), prod(x1))) ***** assert (isequal (prod(df1, 1), prod(x1))) ***** assert (isequal (prod(df1, 2), prod(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/power.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/power.m ***** test stk_test_dfbinaryop(@power, rand(7, 2), .1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@power, rand(7, 2), .1); ***** error stk_test_dfbinaryop(@power, rand(7, 2), .1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/plus.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/plus.m ***** test stk_test_dfbinaryop(@plus, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@plus, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@plus, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/plot.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/plot.m ***** test % plot with x as a vector and z as a (univariate) dataframe x = linspace(0, 2*pi, 30)'; z = stk_dataframe(sin(x)); figure; plot(x, z); close(gcf); ***** test % plot with x as a vector and z as a (multivariate) dataframe x = linspace(0, 2*pi, 30)'; z = stk_dataframe([sin(x) cos(x)], {'sin' 'cos'}); figure; plot(x, z); close(gcf); ***** test % plot with x as a dataframe and z as a vector x = stk_dataframe(linspace(0, 2*pi, 30)'); z = sin(double(x)); figure; plot(x, z); close(gcf); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mtimes.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/mtimes.m ***** shared x, y, z, w u = [1 3 4; 2 7 6]; % 2 x 3 v = [6 2; 1 7; 9 4]; % 3 x 2 w = [45 39; 73 77]; % u * v x = stk_dataframe (u, {}, {'a'; 'b'}); y = stk_dataframe (v, {'c' 'd'}); z = x * y; ***** assert (isa (z, 'stk_dataframe')); ***** assert (isequal (z.data, w)); ***** assert (isequal (z.rownames, x.rownames)); ***** assert (isequal (z.colnames, y.colnames)); ***** shared x, y x = stk_dataframe (rand (3, 2), {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = 3 * x; ***** assert (isequal (y, stk_dataframe (3 * x.data, {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** test y = x * 3; ***** assert (isequal (y, stk_dataframe (3 * x.data, {'x' 'y'}, {'a'; 'b'; 'c'}))); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mrdivide.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/mrdivide.m ***** test x1_data = [8 7; 58 49]; x1 = stk_dataframe (x1_data, {'x' 'y'}, {'a'; 'b'}); x2_data = [8 7; 2 0]; x2 = stk_dataframe (x2_data, {'x' 'y'}, {'u'; 'v'}); y = x1 / x2; assert (stk_isequal_tolabs (y, ... stk_dataframe ([1 0; 7 1], {'u'; 'v'}, {'a'; 'b'}))); ***** shared x_data, x, y_data, y x_data = [3 3; 6 3; 9 12]; y_data = [1 1; 2 1; 3 4]; x = stk_dataframe (x_data, {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = x / 3; ***** assert (isequal (y, stk_dataframe ([1 1; 2 1; 3 4], {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** error y = 3 / x; 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mode.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/mode.m ***** shared x1, df1 x1 = floor(3 * rand(9, 3)); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (mode(df1), mode(x1))) ***** assert (isequal (mode(df1, 1), mode(x1))) ***** assert (isequal (mode(df1, 2), mode(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mldivide.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/mldivide.m ***** test x1_data = [57 7; 2 0]; x1 = stk_dataframe (x1_data, {'x' 'y'}, {'a'; 'b'}); x2_data = [8 7; 2 0]; x2 = stk_dataframe (x2_data, {'w' 'z'}, {'a'; 'b'}); y = x2 \ x1; assert (stk_isequal_tolabs (y, ... stk_dataframe ([1 0; 7 1], {'x'; 'y'}, {'w'; 'z'}))); ***** shared x_data, x, y_data, y x_data = [3 3; 6 3; 9 12]; y_data = [1 1; 2 1; 3 4]; x = stk_dataframe (x_data, {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = 3 \ x; ***** assert (isequal (y, stk_dataframe (y_data, {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** error y = x \ 3; 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/minus.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/minus.m ***** test stk_test_dfbinaryop(@minus, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@minus, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@minus, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/min.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/min.m ***** test stk_test_dfbinaryop ('min', rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop ('min', rand(7, 2), pi); ***** error stk_test_dfbinaryop ('min', rand(7, 2), rand(7, 3)); ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (min(df1), min(x1))) ***** assert (isequal (min(df1, [], 1), min(x1))) ***** assert (isequal (min(df1, [], 2), min(x1, [], 2))) ***** error (min(df1, df1, 2)) ***** test x = stk_dataframe ([5; 2; 4]); [M, k] = min (x); assert ((M == 2) && (k == 2)); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/median.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/median.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (median(df1), median(x1))) ***** assert (isequal (median(df1, 1), median(x1))) ***** assert (isequal (median(df1, 2), median(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mean.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/mean.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (mean(df1), mean(x1))) ***** assert (isequal (mean(df1, 1), mean(x1))) ***** assert (isequal (mean(df1, 2), mean(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/max.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/max.m ***** test stk_test_dfbinaryop ('max', rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop ('max', rand(7, 2), pi); ***** error stk_test_dfbinaryop ('max', rand(7, 2), rand(7, 3)); ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (max(df1), max(x1))) ***** assert (isequal (max(df1, [], 1), max(x1))) ***** assert (isequal (max(df1, [], 2), max(x1, [], 2))) ***** error (max(df1, df1, 2)) ***** test x = stk_dataframe ([1; 3; 2]); [M, k] = max (x); assert ((M == 3) && (k == 2)); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/logical.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/logical.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = logical (x); assert (strcmp (class(v), 'logical') && isequal (v, logical (u))) ***** test u = (rand (4, 3) < 0.5); x = stk_dataframe (u); v = logical (x); assert (strcmp (class (v), 'logical') && isequal (v, u)) ***** test u = uint8 (rand (4, 3) * 5); x = stk_dataframe (u); v = logical (x); assert (strcmp (class (v), 'logical') && isequal (v, logical (u))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log2.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/log2.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log2 (x); assert (strcmp (class (v), class (u)) && isequal (v, log2 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log1p.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/log1p.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log1p (x); assert (strcmp (class (v), class (u)) && isequal (v, log1p (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log10.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/log10.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log10 (x); assert (strcmp (class (v), class (u)) && isequal (v, log10 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/log.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log (x); assert (strcmp (class (v), class (u)) && isequal (v, log (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/length.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/length.m ***** error length (stk_dataframe ([1 2; 3 4; 5 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ldivide.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/ldivide.m ***** test stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), pi); ***** error stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isnan.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/isnan.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isnan (x); assert (islogical (v) && isequal (v, isnan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ismember.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/ismember.m ***** shared u, x, u1, x1, u2, x2 u = rand (10, 4); x = stk_dataframe (u); x1 = x(1, :); u1 = double (x1); u2 = - ones (1, 4); x2 = stk_dataframe (u2); ***** assert (ismember (u1, x, 'rows')) ***** assert (ismember (x1, u, 'rows')) ***** assert (ismember (x1, x, 'rows')) ***** assert (~ ismember (u2, x, 'rows')) ***** assert (~ ismember (x2, u, 'rows')) ***** assert (~ ismember (x2, x, 'rows')) ***** test [b, idx] = ismember ([x2; x1; x1], x, 'rows'); assert (isequal (b, [false; true; true])); assert (isequal (idx, [0; 1; 1])) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isinf.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/isinf.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isinf (x); assert (islogical (v) && isequal (v, isinf (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isfinite.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/isfinite.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isfinite (x); assert (islogical (v) && isequal (v, isfinite (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/horzcat.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/horzcat.m ***** shared u, v u = rand(3, 2); v = rand(3, 2); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); ***** test x = stk_dataframe(u, {'x1' 'x2'}, {'a'; 'b'; 'c'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); assert(all(strcmp(z.rownames, {'a'; 'b'; 'c'}))); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}, {'a'; 'b'; 'c'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); assert(all(strcmp(z.rownames, {'a'; 'b'; 'c'}))); ***** test % incompatible row names x = stk_dataframe (u, {'x1' 'x2'}, {'a'; 'b'; 'c'}); y = stk_dataframe (v, {'y1' 'y2'}, {'a'; 'b'; 'd'}); z = horzcat (x, y); assert (isequal (z.rownames, {})); warning: Incompatible row names ! The output of horzcat will have no row names. warning: called from horzcat at line 73 column 9 __test__ at line 5 column 4 test at line 683 column 11 /tmp/tmp.wXNs5VG0ZS at line 1678 column 31 ***** test x = stk_dataframe (u); z = horzcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u v])); ***** test y = stk_dataframe (v); z = horzcat (u, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u v])); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y, u, v); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v u v])); 7 tests, 7 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/fieldnames.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/fieldnames.m ***** test x = stk_dataframe (rand (3, 2), {'u' 'v'}); assert (isequal (sort (fieldnames (x)), ... {'colnames'; 'data'; 'info'; 'rownames'; 'sample_size'; 'u'; 'v'})); ***** test x = stk_dataframe (rand (3, 2)); x.rownames(2:3) = {'aa', 'bb'}; x.colnames{2} = 'toto'; assert (isequal (fieldnames (x), ... {'toto'; 'aa'; 'bb'; 'data'; 'info'; ... 'rownames'; 'colnames'; 'sample_size'})); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/expm1.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/expm1.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = expm1 (x); assert (strcmp (class (v), class (u)) && isequal (v, expm1 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/exp.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/exp.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = exp (x); assert (strcmp (class (v), class (u)) && isequal (v, exp (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/end.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/end.m ***** shared x x = stk_dataframe ([1; 2; 3]); ***** assert (isequal (double (x(2:end, :)), [2; 3])) ***** assert (isequal (double (x(2:end)), [2; 3])) ***** assert (isequal (double (x(2, 1:end)), 2)) ***** assert (isequal (double (x(end)), 3)) ***** shared x x = stk_dataframe ([1 2; 3 4; 5 6]); ***** assert (isequal (x(2:end, :), x(2:3, :))) ***** assert (isequal (x(2, 1:end), x(2, :))) ***** assert (isequal (x(2:end, 2:end), x(2:3, 2))) ***** error x(1:end, 1:end, 1:end) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/double.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/double.m ***** test u = rand(4, 3); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, u)) ***** test u = (rand(4, 3) < 0.5); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, double(u))) ***** test u = uint8 (rand (4, 3) * 5); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, double(u))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/display.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/display.m ***** test display (stk_dataframe (rand (3, 2))); = <3x2 stk_dataframe array> : -------- -------- * : 0.015708 0.023501 * : 0.713912 0.495548 * : 0.981431 0.094173 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/disp.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/disp.m ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_dataframe (rand (3, 2)); ***** test format rat; disp (x); : -------- -------- * : 0.900987 0.296262 * : 0.739410 0.547775 * : 0.291572 0.241839 ***** test format long; disp (x); : ---------------- ---------------- * : 0.90098729488803 0.29626231038813 * : 0.73941037182603 0.54777492891704 * : 0.29157217902442 0.24183910925422 ***** test format short; disp (x); format (fmt); : -------- -------- * : 0.900987 0.296262 * : 0.739410 0.547775 * : 0.291572 0.241839 ***** test disp (stk_dataframe (zeros (0, 1))) Empty data frame with 0 rows and 0 columns ***** test disp (stk_dataframe (zeros (0, 2))) Empty data frame with 0 rows and 0 columns 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ctranspose.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/ctranspose.m ***** test u = rand(3, 2) + 1i * rand(3, 2); data = stk_dataframe(u, {'x' 'y'}, {'obs1'; 'obs2'; 'obs3'}); data = data'; assert (isa(data, 'stk_dataframe') && isequal(double(data), u')); assert (isequal(data.rownames, {'x'; 'y'})); assert (isequal(data.colnames, {'obs1' 'obs2' 'obs3'})); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cosh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/cosh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cosh (x); assert (strcmp (class (v), class (u)) && isequal (v, cosh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cosd.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/cosd.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cosd (x); assert (strcmp (class (v), class (u)) && isequal (v, cosd (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cos.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/cos.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cos (x); assert (strcmp (class (v), class (u)) && isequal (v, cos (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cat.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/cat.m ***** shared u, v, x, y u = rand(3, 2); v = rand(3, 2); x = stk_dataframe(u); y = stk_dataframe(v); ***** test % vertical z = cat(1, x, y); assert(isa(z, 'stk_dataframe')); assert(isequal(double(z), [u; v])); ***** error z = cat(3, x, y); ***** test % horizontal y = stk_dataframe(v, {'y1' 'y2'}); z = cat(2, x, y); assert(isa(z, 'stk_dataframe')); assert(isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'' '' 'y1' 'y2'}))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/bsxfun.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/bsxfun.m ***** shared x1, x2, data1, data2 x1 = rand (3, 2); data1 = stk_dataframe (x1); x2 = rand (3, 2); data2 = stk_dataframe (x2); ***** test z = bsxfun (@plus, data1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** test z = bsxfun (@plus, x1, data2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** test z = bsxfun (@plus, data1, data2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** shared x, y x = stk_dataframe (randn (2), {'x1', 'x2'}, {'a'; 'b'}); y = stk_dataframe (randn (2), {'y1', 'y2'}, {'c'; 'd'}); ***** test z = x + y; assert (isequal (z.colnames, x.colnames)); assert (isequal (z.rownames, x.rownames)); ***** test z = y + x; assert (isequal (z.colnames, y.colnames)); assert (isequal (z.rownames, y.rownames)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atanh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/atanh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atanh (x); assert (strcmp (class (v), class (u)) && isequal (v, atanh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atand.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/atand.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atand (x); assert (strcmp (class (v), class (u)) && isequal (v, atand (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atan.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/atan.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atan (x); assert (strcmp (class (v), class (u)) && isequal (v, atan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asinh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/asinh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asinh (x); assert (strcmp (class (v), class (u)) && isequal (v, asinh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asind.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/asind.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asind (x); assert (strcmp (class (v), class (u)) && isequal (v, asind (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asin.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/asin.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asin (x); assert (strcmp (class (v), class (u)) && isequal (v, asin (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/apply.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/apply.m ***** shared x, t, u t = rand (3, 2); x = stk_dataframe (t); ***** test u = apply (x, 1, @sum); ***** assert (isequal (u, sum (t, 1))) ***** test u = apply (x, 2, @sum); ***** assert (isequal (u, sum (t, 2))) ***** error u = apply (x, 3, @sum); ***** test u = apply (x, 1, @min, []); ***** assert (isequal (u, min (t, [], 1))) ***** test u = apply (x, 2, @min, []); ***** assert (isequal (u, min (t, [], 2))) ***** error u = apply (x, 3, @min, []); ***** test t = [1; 3; 2]; x = stk_dataframe (t); [M, k] = apply (x, 1, @max, []); assert ((M == 3) && (k == 2)); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acosh.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/acosh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acosh (x); assert (strcmp (class (v), class (u)) && isequal (v, acosh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acosd.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/acosd.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acosd (x); assert (strcmp (class (v), class (u)) && isequal (v, acosd (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acos.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/acos.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acos (x); assert (strcmp (class (v), class (u)) && isequal (v, acos (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/abs.m] >>>>> /build/octave-stk-2.7.0/inst/arrays/@stk_dataframe/abs.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = abs (x); assert (strcmp (class (v), class (u)) && isequal (v, abs (u))) 1 test, 1 passed, 0 known failure, 0 skipped Checking C++ files ... Summary: 1555 tests, 1555 passed, 0 known failures, 0 skipped dh_installdocs -O--buildsystem=octave dh_installchangelogs -O--buildsystem=octave dh_octave_changelogs -O--buildsystem=octave dh_octave_examples -O--buildsystem=octave dh_installsystemduser -O--buildsystem=octave dh_lintian -O--buildsystem=octave dh_perl -O--buildsystem=octave dh_link -O--buildsystem=octave dh_strip_nondeterminism -O--buildsystem=octave dh_compress -O--buildsystem=octave dh_fixperms -O--buildsystem=octave dh_missing -O--buildsystem=octave dh_dwz -a -O--buildsystem=octave dh_strip -a -O--buildsystem=octave dh_makeshlibs -a -O--buildsystem=octave dh_shlibdeps -a -O--buildsystem=octave dh_octave_substvar -O--buildsystem=octave dh_installdeb -O--buildsystem=octave dh_gencontrol -O--buildsystem=octave dpkg-gencontrol: warning: package octave-stk: substitution variable ${octave:Upstream-Description} unused, but is defined dh_md5sums -O--buildsystem=octave dh_builddeb -O--buildsystem=octave dpkg-deb: building package 'octave-stk' in '../octave-stk_2.7.0-3_amd64.deb'. dpkg-deb: building package 'octave-stk-dbgsym' in '../octave-stk-dbgsym_2.7.0-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../octave-stk_2.7.0-3_amd64.buildinfo dpkg-genchanges --build=binary -O../octave-stk_2.7.0-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3630502 and its subdirectories I: Current time: Thu Jun 20 19:54:24 -12 2024 I: pbuilder-time-stamp: 1718956464 Sat May 20 01:31:24 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Sat May 20 01:31:24 UTC 2023 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Sat May 20 01:59:20 UTC 2023 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Sat May 20 01:59:20 UTC 2023 I: octave-stk_2.7.0-3_amd64.changes: Format: 1.8 Date: Mon, 05 Dec 2022 20:02:30 -0300 Source: octave-stk Binary: octave-stk octave-stk-dbgsym Architecture: amd64 Version: 2.7.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Octave Group Changed-By: Rafael Laboissière Description: octave-stk - (not so) Small Toolbox for Kriging Changes: octave-stk (2.7.0-3) unstable; urgency=medium . * Team upload . * d/control: Bump Standards-Version to 4.6.1 (no changes needed) * Build-depend on dh-sequence-octave + d/control: Ditto + d/rules: Drop the --with=octave option from dh call * d/watch: Adjust for new URL at gnu-octave.github.io * d/s/lintian-override: Override Lintian warning debian-watch-lacks-sourceforge-redirector Checksums-Sha1: 04918a715d67890aa804469f22d65e59d56f720e 75624 octave-stk-dbgsym_2.7.0-3_amd64.deb f310f49e223668b989aef0413c1397f83437a004 21500 octave-stk_2.7.0-3_amd64.buildinfo f0bf010de80cf0c2a3e143a025bb8a7cf50c1a47 316864 octave-stk_2.7.0-3_amd64.deb Checksums-Sha256: 718e1b00cdf5982f6248a0e9dcf23a2f60c2d7646c0754c75e5279b6a7d34559 75624 octave-stk-dbgsym_2.7.0-3_amd64.deb bb9d26a1e2d69fb6c81649ec4af3768cc8b27bcdbbdeaa10f0226ec375d4e4a1 21500 octave-stk_2.7.0-3_amd64.buildinfo 8667fe1b20933918f40a6edd062d73137e3a89d133ea77988e6b68f43d2485a1 316864 octave-stk_2.7.0-3_amd64.deb Files: 005d3d2e7502a04e8bee6899ac50fb84 75624 debug optional octave-stk-dbgsym_2.7.0-3_amd64.deb e748205c93727aa83d524932fda64e62 21500 math optional octave-stk_2.7.0-3_amd64.buildinfo 68801a04829fbebefaf7115fb2ba7886 316864 math optional octave-stk_2.7.0-3_amd64.deb Sat May 20 01:59:22 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/octave-stk_2.7.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/octave-stk_2.7.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/octave-stk_2.7.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/b1/octave-stk_2.7.0-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.PfWgswtg/b2/octave-stk_2.7.0-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.312s) 0.312s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sat May 20 01:59:23 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sat May 20 01:59:23 UTC 2023 I: octave-stk from bookworm built successfully and reproducibly on amd64. Sat May 20 01:59:24 UTC 2023 I: Submitting .buildinfo files to external archives: Sat May 20 01:59:24 UTC 2023 I: Submitting 24K b1/octave-stk_2.7.0-3_amd64.buildinfo.asc Sat May 20 01:59:25 UTC 2023 I: Submitting 24K b2/octave-stk_2.7.0-3_amd64.buildinfo.asc Sat May 20 01:59:26 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat May 20 01:59:26 UTC 2023 I: Done submitting .buildinfo files. Sat May 20 01:59:26 UTC 2023 I: Removing signed octave-stk_2.7.0-3_amd64.buildinfo.asc files: removed './b1/octave-stk_2.7.0-3_amd64.buildinfo.asc' removed './b2/octave-stk_2.7.0-3_amd64.buildinfo.asc'