Tue Apr 18 18:03:25 UTC 2023 I: starting to build cif2cell/bookworm/amd64 on jenkins on '2023-04-18 18:03' Tue Apr 18 18:03:25 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_15/9064/console.log Tue Apr 18 18:03:25 UTC 2023 I: Downloading source for bookworm/cif2cell=2.0.0a5+dfsg-1 --2023-04-18 18:03:25-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/cif2cell/cif2cell_2.0.0a5%2bdfsg-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2203 (2.2K) [text/prs.lines.tag] Saving to: ‘cif2cell_2.0.0a5+dfsg-1.dsc’ 0K .. 100% 183M=0s 2023-04-18 18:03:25 (183 MB/s) - ‘cif2cell_2.0.0a5+dfsg-1.dsc’ saved [2203/2203] Tue Apr 18 18:03:25 UTC 2023 I: cif2cell_2.0.0a5+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cif2cell Binary: python3-cif2cell Architecture: all Version: 2.0.0a5+dfsg-1 Maintainer: Debian Science Maintainers Uploaders: Andrius Merkys , Homepage: https://github.com/torbjornbjorkman/cif2cell Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/science-team/cif2cell Vcs-Git: https://salsa.debian.org/science-team/cif2cell.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest Build-Depends: debhelper-compat (= 13), dh-python, help2man, python3-all, python3-pycifrw , python3-pytest , python3-setuptools Package-List: python3-cif2cell deb science optional arch=all Checksums-Sha1: 94e2d1d52b333a6a1d10e598f163b11fccac6952 12103468 cif2cell_2.0.0a5+dfsg.orig.tar.xz 9fa7a8c8e5c4c6bf535aa69548ed509eb29920dd 3000 cif2cell_2.0.0a5+dfsg-1.debian.tar.xz Checksums-Sha256: fbb9525003e74aa16ee1305925900515036b889d674f97c05cd1ff76ef7e936e 12103468 cif2cell_2.0.0a5+dfsg.orig.tar.xz 062ebed2d5f79887e64142701afe7c5ee896817b4da1172ab7ef454afada1a8b 3000 cif2cell_2.0.0a5+dfsg-1.debian.tar.xz Files: fa1c7033c287e4170677e5d5910b205b 12103468 cif2cell_2.0.0a5+dfsg.orig.tar.xz 96393a215885df07131a1a3f0d5825ab 3000 cif2cell_2.0.0a5+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmJYGg4SHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHOJcP/j6mMq8VWNgA/+6tPdB8GXnpKGfdQV+R TW8dM+W+EaCLDQjUsO9ByyHl93lt0hMXuP+FMc4v27dUx73KAWKmpg1rtp3ZcWnS Un2fmtuIa3SiDHUFzzmbIeBvYxcJMiPuKmbF8G+T/ihvzar6I9LK8Wt26/oc2dLr t6z3ic/pNSoOufxBDy222iM6Dm0SYpGg7Umu4VXGefwJA7ZDTvwyI1QraRIZ3O5f KGQ1p3d0Ngbxmo64wUVurwmRsfUV51PQTdWdEiAkmargR8HilmUuPwpJ+PfGb6Ai ulfY9HAZ5lx/3P+C30c91rcaslEk4zsDh8wV15TD74DdoNtw1oMNKisQpsnfbucw mj0X5nRGqLYmPVfx0HbTTUpIJpcU7NsYOB2FCTCPHrcPY8tYVOPR2xhmqvVyrvoP PlXc2007oG70aW8hVfV7yhKMun2b31KyV1698s5+qgJBpIvqrXHu2TWPdljdHEgc ZKZ0Jxyhd5nDw20xqnyEnIUH0NYu8RiitC/F7gEh/eN5bT0xnPD/RnhVHEkozYaj Khm3EuyI+cinsNjiPVol7wyQ2Cb5ZTbJVq8qzoxonutiR13VtTuIGkRsVz609FHI D2m7rgN+kFEWwh4Llqo29LvShGMIAEEb3ztBRAkQBBEeoAQwdkL/NyOdaPgxsCpa HaK1kqsz6oaX =nn/D -----END PGP SIGNATURE----- Tue Apr 18 18:03:25 UTC 2023 I: Checking whether the package is not for us Tue Apr 18 18:03:25 UTC 2023 I: Starting 1st build on remote node ionos11-amd64.debian.net. Tue Apr 18 18:03:25 UTC 2023 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Tue Apr 18 18:09:20 UTC 2023 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Apr 18 06:03:30 -12 2023 I: pbuilder-time-stamp: 1681841010 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cif2cell_2.0.0a5+dfsg-1.dsc] I: copying [./cif2cell_2.0.0a5+dfsg.orig.tar.xz] I: copying [./cif2cell_2.0.0a5+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Apr 14 00:56:46 2022 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cif2cell_2.0.0a5+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting cif2cell in cif2cell-2.0.0a5+dfsg dpkg-source: info: unpacking cif2cell_2.0.0a5+dfsg.orig.tar.xz dpkg-source: info: unpacking cif2cell_2.0.0a5+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying shebang.patch dpkg-source: info: applying tests.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2981023/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='785ba5a2f10945309a70ceb9ef814774' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2981023' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/pbuilderrc_nknG --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/b1 --logfile b1/build.log cif2cell_2.0.0a5+dfsg-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Feb 12 08:05 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 08:05 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar -rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/2981023/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, help2man, python3-all, python3-pycifrw, python3-pytest, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-pycifrw; however: Package python3-pycifrw is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} liblapack3{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-all{a} python3-attr{a} python3-distutils{a} python3-iniconfig{a} python3-lib2to3{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-ply{a} python3-py{a} python3-pycifrw{a} python3-pytest{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-pygments wget 0 packages upgraded, 62 newly installed, 0 to remove and 0 not upgraded. Need to get 34.9 MB of archives. After unpacking 144 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 12 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 help2man amd64 1.49.3 [198 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get: 51 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 53 http://deb.debian.org/debian bookworm/main amd64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 python3-py all 1.11.0-1 [89.2 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 python3-pycifrw amd64 4.4.4-3+b1 [122 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 python3-pytest all 7.2.1-2 [236 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Fetched 34.9 MB in 3s (11.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up autopoint (0.21-12) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-packaging (23.0-1) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-attr (22.2.0-1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-py (1.11.0-1) ... Setting up python3-pytest (7.2.1-2) ... Setting up python3-ply (3.11-5) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-pycifrw (4.4.4-3+b1) ... /usr/lib/python3/dist-packages/CifFile/CifFile_module.py:356: SyntaxWarning: "is not" with a literal. Did you mean "!="? if do_imports is not 'No': Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/cif2cell-2.0.0a5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cif2cell_2.0.0a5+dfsg-1_source.changes dpkg-buildpackage: info: source package cif2cell dpkg-buildpackage: info: source version 2.0.0a5+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from cif2cell-2.0.0a5+dfsg/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/cif2cell-2.0.0a5+dfsg' dh_clean rm -rf .pytest_cache make[1]: Leaving directory '/build/cif2cell-2.0.0a5+dfsg' debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/utils.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/uctools.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/spacegroupdata.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/elementdata.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/__init__.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell copying cif2cell/ESPInterfaces.py -> /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell running build_scripts creating build creating build/scripts-3.11 copying and adjusting binaries/cif2cell -> build/scripts-3.11 copying and adjusting binaries/vasp2cif -> build/scripts-3.11 changing mode of build/scripts-3.11/cif2cell from 644 to 755 changing mode of build/scripts-3.11/vasp2cif from 644 to 755 debian/rules override_dh_auto_test make[1]: Entering directory '/build/cif2cell-2.0.0a5+dfsg' PYTHONPATH=. pytest-3 ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack rootdir: /build/cif2cell-2.0.0a5+dfsg collected 7 items tests/test_cif2cell.py ....... [100%] ============================== 7 passed in 23.78s ============================== make[1]: Leaving directory '/build/cif2cell-2.0.0a5+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-cif2cell/ -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_scripts running install_lib creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11 creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/ESPInterfaces.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/__init__.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/elementdata.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/spacegroupdata.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/uctools.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell copying /build/cif2cell-2.0.0a5+dfsg/.pybuild/cpython3_3.11_cif2cell/build/cif2cell/utils.py -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/ESPInterfaces.py to ESPInterfaces.cpython-311.pyc byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/__init__.py to __init__.cpython-311.pyc byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/elementdata.py to elementdata.cpython-311.pyc byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/spacegroupdata.py to spacegroupdata.cpython-311.pyc byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/uctools.py to uctools.cpython-311.pyc byte-compiling /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell/utils.py to utils.cpython-311.pyc running install_data creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell copying LICENSE -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs copying cifs/gamma-Pu.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs copying cifs/anatase.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs copying cifs/alpha-Mn.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs copying cifs/SiC.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs copying cifs/BaTiO3_cubic.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/diamond.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Zr.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Zn.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Yb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Y.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/W.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/V.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/U.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Tm.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Tl.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ti.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Th.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Te.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Tc2.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Tc.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Tb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ta.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sr.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sn-beta.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sn-alpha.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sm.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Si.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Se.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sc.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Sb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/S.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ru.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Rh.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Re.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Rb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ra.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pu-gamma.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pu-epsilon.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pu-delta.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pu-alpha.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pt.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pr.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Po.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pd.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Pa.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/P.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Os.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Np.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ni.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Nd.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Nb.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Na.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Mo.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Mn.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Mg.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Lu.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Li.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/La.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/K.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ir.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/In.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/I.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ho.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Hg.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Hf.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ge.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Gd.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ga.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Fe.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Eu.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Er.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Dy.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Cu.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Cs.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Cr.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Co.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Cm.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ce-gamma.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Cd.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ca.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/C.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Br.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Bk.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Bi.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Be.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ba.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/B.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Au.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/As.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Am.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Al.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ag.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/Ac.cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table copying cifs/periodic_table/README -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/sample_cifs/periodic_table creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/docs copying docs/cif2cell.pdf -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/cif2cell/docs running install_egg_info running egg_info creating cif2cell.egg-info writing cif2cell.egg-info/PKG-INFO writing dependency_links to cif2cell.egg-info/dependency_links.txt writing requirements to cif2cell.egg-info/requires.txt writing top-level names to cif2cell.egg-info/top_level.txt writing manifest file 'cif2cell.egg-info/SOURCES.txt' reading manifest file 'cif2cell.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'cif2cell.egg-info/SOURCES.txt' Copying cif2cell.egg-info to /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/lib/python3.11/dist-packages/cif2cell-2.0.0a5.egg-info Skipping SOURCES.txt running install_scripts creating /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/bin copying build/scripts-3.11/vasp2cif -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/bin copying build/scripts-3.11/cif2cell -> /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/bin changing mode of /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/bin/vasp2cif to 755 changing mode of /build/cif2cell-2.0.0a5+dfsg/debian/python3-cif2cell/usr/bin/cif2cell to 755 debian/rules override_dh_install make[1]: Entering directory '/build/cif2cell-2.0.0a5+dfsg' dh_install rm -rf debian/python3-cif2cell/usr/lib/cif2cell make[1]: Leaving directory '/build/cif2cell-2.0.0a5+dfsg' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/cif2cell-2.0.0a5+dfsg' mkdir --parents debian/tmp PYTHONPATH=. help2man --no-info \ --name 'prepare CIF files for electronic structure calculations' \ --version-string 2.0.0a5+dfsg binaries/cif2cell > debian/tmp/cif2cell.1 PYTHONPATH=. help2man --no-info \ --name 'tool to make CIF format files out of VASP POSCAR+POTCAR/OUTCAR files' \ --version-string 2.0.0a5+dfsg binaries/vasp2cif > debian/tmp/vasp2cif.1 dh_installman make[1]: Leaving directory '/build/cif2cell-2.0.0a5+dfsg' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-cif2cell' in '../python3-cif2cell_2.0.0a5+dfsg-1_all.deb'. dpkg-genbuildinfo --build=binary -O../cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../cif2cell_2.0.0a5+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from cif2cell-2.0.0a5+dfsg/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2981023 and its subdirectories I: Current time: Tue Apr 18 06:09:19 -12 2023 I: pbuilder-time-stamp: 1681841359 Tue Apr 18 18:09:20 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Tue Apr 18 18:09:20 UTC 2023 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Tue Apr 18 18:13:27 UTC 2023 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Tue Apr 18 18:13:27 UTC 2023 I: cif2cell_2.0.0a5+dfsg-1_amd64.changes: Format: 1.8 Date: Thu, 14 Apr 2022 08:32:26 -0400 Source: cif2cell Binary: python3-cif2cell Architecture: all Version: 2.0.0a5+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andrius Merkys Description: python3-cif2cell - prepare CIF files for electronic structure calculations Changes: cif2cell (2.0.0a5+dfsg-1) unstable; urgency=medium . * New upstream version 2.0.0a5+dfsg Checksums-Sha1: 1e8c0e07ec1ba9838aab42f4990aa53a8f6a0cfb 5925 cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo b439e5e891660a970a8db913da09c972bc68c726 107124 python3-cif2cell_2.0.0a5+dfsg-1_all.deb Checksums-Sha256: 8a23b2a4a02fa20351fed555544a5b3fe1fe2415384783ff7efca26befd7e64b 5925 cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo d230ba6c2267ca812db8ab5eee46a469f77364185a2c8e5c3c4106570f4d14f7 107124 python3-cif2cell_2.0.0a5+dfsg-1_all.deb Files: 6f14f9c7399426e4209cb1e7a823ee0a 5925 science optional cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo 7adfda9617e7c9daa9e4574416bc0224 107124 science optional python3-cif2cell_2.0.0a5+dfsg-1_all.deb Tue Apr 18 18:13:28 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/cif2cell_2.0.0a5+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/cif2cell_2.0.0a5+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/cif2cell_2.0.0a5+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/b1/cif2cell_2.0.0a5+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.gTRomKnW/b2/cif2cell_2.0.0a5+dfsg-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.328s) 0.328s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Tue Apr 18 18:13:29 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Tue Apr 18 18:13:29 UTC 2023 I: cif2cell from bookworm built successfully and reproducibly on amd64. Tue Apr 18 18:13:31 UTC 2023 I: Submitting .buildinfo files to external archives: Tue Apr 18 18:13:31 UTC 2023 I: Submitting 8.0K b1/cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo.asc Tue Apr 18 18:13:32 UTC 2023 I: Submitting 8.0K b2/cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo.asc Tue Apr 18 18:13:34 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Apr 18 18:13:34 UTC 2023 I: Done submitting .buildinfo files. Tue Apr 18 18:13:34 UTC 2023 I: Removing signed cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo.asc files: removed './b1/cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo.asc' removed './b2/cif2cell_2.0.0a5+dfsg-1_amd64.buildinfo.asc'