I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 11 20:27:49 +14 2024 I: pbuilder-time-stamp: 1726036069 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [r-cran-seurat_5.1.0-1.dsc] I: copying [./r-cran-seurat_5.1.0.orig.tar.gz] I: copying [./r-cran-seurat_5.1.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Sep 10 23:46:06 2024 gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 gpgv: issuer "plessy@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.1.0-1.dsc: no acceptable signature found dpkg-source: info: extracting r-cran-seurat in r-cran-seurat-5.1.0 dpkg-source: info: unpacking r-cran-seurat_5.1.0.orig.tar.gz dpkg-source: info: unpacking r-cran-seurat_5.1.0-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D01_modify_environment starting debug: Running on infom07-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Sep 11 06:28 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=c31fdd8bae7b4fdaa24d2de6d2c727a3 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=23433 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Xyi3HFsa/pbuilderrc_9B4R --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Xyi3HFsa/b2 --logfile b2/build.log r-cran-seurat_5.1.0-1.dsc' SUDO_GID=111 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.1.0-25-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.106-3 (2024-08-26) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-seuratobject (>= 5.0.2), r-cran-cluster, r-cran-cowplot, r-cran-fastdummies, r-cran-fitdistrplus, r-cran-future, r-cran-future.apply, r-cran-generics (>= 0.1.3), r-cran-ggplot2, r-cran-ggrepel, r-cran-ggridges, r-cran-httr, r-cran-ica, r-cran-igraph, r-cran-irlba, r-cran-jsonlite, r-cran-kernsmooth, r-cran-leiden, r-cran-lifecycle, r-cran-lmtest, r-cran-mass, r-cran-matrix (>= 1.5-0), r-cran-matrixstats, r-cran-miniui, r-cran-patchwork, r-cran-pbapply, r-cran-plotly, r-cran-png, r-cran-progressr, r-cran-purrr, r-cran-rann, r-cran-rcolorbrewer, r-cran-rcpp (>= 1.0.7), r-cran-rcppannoy, r-cran-rcpphnsw, r-cran-reticulate, r-cran-rlang, r-cran-rocr, r-cran-rspectra, r-cran-rtsne, r-cran-scales, r-cran-scattermore (>= 1.2), r-cran-sctransform (>= 0.4.1), r-cran-shiny, r-cran-spatstat.explore, r-cran-spatstat.geom, r-cran-tibble, r-cran-uwot, r-cran-rcppeigen, r-cran-rcppprogress dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19722 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-cran-seuratobject (>= 5.0.2); however: Package r-cran-seuratobject is not installed. pbuilder-satisfydepends-dummy depends on r-cran-cluster; however: Package r-cran-cluster is not installed. pbuilder-satisfydepends-dummy depends on r-cran-cowplot; however: Package r-cran-cowplot is not installed. pbuilder-satisfydepends-dummy depends on r-cran-fastdummies; however: Package r-cran-fastdummies is not installed. pbuilder-satisfydepends-dummy depends on r-cran-fitdistrplus; however: Package r-cran-fitdistrplus is not installed. pbuilder-satisfydepends-dummy depends on r-cran-future; however: Package r-cran-future is not installed. pbuilder-satisfydepends-dummy depends on r-cran-future.apply; however: Package r-cran-future.apply is not installed. pbuilder-satisfydepends-dummy depends on r-cran-generics (>= 0.1.3); however: Package r-cran-generics is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggplot2; however: Package r-cran-ggplot2 is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggrepel; however: Package r-cran-ggrepel is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggridges; however: Package r-cran-ggridges is not installed. pbuilder-satisfydepends-dummy depends on r-cran-httr; however: Package r-cran-httr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ica; however: Package r-cran-ica is not installed. pbuilder-satisfydepends-dummy depends on r-cran-igraph; however: Package r-cran-igraph is not installed. pbuilder-satisfydepends-dummy depends on r-cran-irlba; however: Package r-cran-irlba is not installed. pbuilder-satisfydepends-dummy depends on r-cran-jsonlite; however: Package r-cran-jsonlite is not installed. pbuilder-satisfydepends-dummy depends on r-cran-kernsmooth; however: Package r-cran-kernsmooth is not installed. pbuilder-satisfydepends-dummy depends on r-cran-leiden; however: Package r-cran-leiden is not installed. pbuilder-satisfydepends-dummy depends on r-cran-lifecycle; however: Package r-cran-lifecycle is not installed. pbuilder-satisfydepends-dummy depends on r-cran-lmtest; however: Package r-cran-lmtest is not installed. pbuilder-satisfydepends-dummy depends on r-cran-mass; however: Package r-cran-mass is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrix (>= 1.5-0); however: Package r-cran-matrix is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrixstats; however: Package r-cran-matrixstats is not installed. pbuilder-satisfydepends-dummy depends on r-cran-miniui; however: Package r-cran-miniui is not installed. pbuilder-satisfydepends-dummy depends on r-cran-patchwork; however: Package r-cran-patchwork is not installed. pbuilder-satisfydepends-dummy depends on r-cran-pbapply; however: Package r-cran-pbapply is not installed. pbuilder-satisfydepends-dummy depends on r-cran-plotly; however: Package r-cran-plotly is not installed. pbuilder-satisfydepends-dummy depends on r-cran-png; however: Package r-cran-png is not installed. pbuilder-satisfydepends-dummy depends on r-cran-progressr; however: Package r-cran-progressr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-purrr; however: Package r-cran-purrr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rann; however: Package r-cran-rann is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcolorbrewer; however: Package r-cran-rcolorbrewer is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcpp (>= 1.0.7); however: Package r-cran-rcpp is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppannoy; however: Package r-cran-rcppannoy is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcpphnsw; however: Package r-cran-rcpphnsw is not installed. pbuilder-satisfydepends-dummy depends on r-cran-reticulate; however: Package r-cran-reticulate is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rlang; however: Package r-cran-rlang is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rocr; however: Package r-cran-rocr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rspectra; however: Package r-cran-rspectra is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rtsne; however: Package r-cran-rtsne is not installed. pbuilder-satisfydepends-dummy depends on r-cran-scales; however: Package r-cran-scales is not installed. pbuilder-satisfydepends-dummy depends on r-cran-scattermore (>= 1.2); however: Package r-cran-scattermore is not installed. pbuilder-satisfydepends-dummy depends on r-cran-sctransform (>= 0.4.1); however: Package r-cran-sctransform is not installed. pbuilder-satisfydepends-dummy depends on r-cran-shiny; however: Package r-cran-shiny is not installed. pbuilder-satisfydepends-dummy depends on r-cran-spatstat.explore; however: Package r-cran-spatstat.explore is not installed. pbuilder-satisfydepends-dummy depends on r-cran-spatstat.geom; however: Package r-cran-spatstat.geom is not installed. pbuilder-satisfydepends-dummy depends on r-cran-tibble; however: Package r-cran-tibble is not installed. pbuilder-satisfydepends-dummy depends on r-cran-uwot; however: Package r-cran-uwot is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppeigen; however: Package r-cran-rcppeigen is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppprogress; however: Package r-cran-rcppprogress is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} javascript-common{a} libalgorithm-c3-perl{a} libamd3{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcolamd3{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libglpk40{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-bootstrap4{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-mathjax{a} libjs-microplugin.js{a} libjs-modernizr{a} libjs-popper.js{a} libjs-prettify{a} libjs-sifter.js{a} libjs-twitter-bootstrap-datepicker{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} libltdl7{a} liblua5.4-0{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsuitesparseconfig7{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1t64{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} littler{a} m4{a} man-db{a} media-types{a} netbase{a} node-bootstrap-sass{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pandoc{a} pandoc-data{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} r-base-core{a} r-base-dev{a} r-cran-abind{a} r-cran-askpass{a} r-cran-base64enc{a} r-cran-bh{a} r-cran-bitops{a} r-cran-bslib{a} r-cran-cachem{a} r-cran-catools{a} r-cran-cli{a} r-cran-cluster{a} r-cran-codetools{a} r-cran-colorspace{a} r-cran-colourpicker{a} r-cran-commonmark{a} r-cran-cowplot{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-crosstalk{a} r-cran-curl{a} r-cran-data.table{a} r-cran-deldir{a} r-cran-digest{a} r-cran-dotcall64{a} r-cran-dplyr{a} r-cran-dqrng{a} r-cran-evaluate{a} r-cran-fansi{a} r-cran-farver{a} r-cran-fastdummies{a} r-cran-fastmap{a} r-cran-fitdistrplus{a} r-cran-fnn{a} r-cran-fontawesome{a} r-cran-fs{a} r-cran-future{a} r-cran-future.apply{a} r-cran-gdata{a} r-cran-generics{a} r-cran-ggplot2{a} r-cran-ggrepel{a} r-cran-ggridges{a} r-cran-globals{a} r-cran-glue{a} r-cran-goftest{a} r-cran-gplots{a} r-cran-gridextra{a} r-cran-gtable{a} r-cran-gtools{a} r-cran-here{a} r-cran-highr{a} r-cran-htmltools{a} r-cran-htmlwidgets{a} r-cran-httpuv{a} r-cran-httr{a} r-cran-ica{a} r-cran-igraph{a} r-cran-irlba{a} r-cran-isoband{a} r-cran-jquerylib{a} r-cran-jsonlite{a} r-cran-kernsmooth{a} r-cran-knitr{a} r-cran-labeling{a} r-cran-later{a} r-cran-lattice{a} r-cran-lazyeval{a} r-cran-leiden{a} r-cran-lifecycle{a} r-cran-listenv{a} r-cran-littler{a} r-cran-lmtest{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mgcv{a} r-cran-mime{a} r-cran-miniui{a} r-cran-munsell{a} r-cran-nlme{a} r-cran-openssl{a} r-cran-parallelly{a} r-cran-patchwork{a} r-cran-pbapply{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plotly{a} r-cran-plyr{a} r-cran-png{a} r-cran-polyclip{a} r-cran-progressr{a} r-cran-promises{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rann{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppannoy{a} r-cran-rcpparmadillo{a} r-cran-rcppeigen{a} r-cran-rcpphnsw{a} r-cran-rcppprogress{a} r-cran-rcpptoml{a} r-cran-reshape2{a} r-cran-reticulate{a} r-cran-rlang{a} r-cran-rmarkdown{a} r-cran-rocr{a} r-cran-rprojroot{a} r-cran-rspectra{a} r-cran-rtsne{a} r-cran-sass{a} r-cran-scales{a} r-cran-scattermore{a} r-cran-sctransform{a} r-cran-seuratobject{a} r-cran-shiny{a} r-cran-shinyjs{a} r-cran-sitmo{a} r-cran-sourcetools{a} r-cran-sp{a} r-cran-spam{a} r-cran-spatstat.data{a} r-cran-spatstat.explore{a} r-cran-spatstat.geom{a} r-cran-spatstat.random{a} r-cran-spatstat.sparse{a} r-cran-spatstat.utils{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-survival{a} r-cran-sys{a} r-cran-tensor{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-tinytex{a} r-cran-utf8{a} r-cran-uwot{a} r-cran-vctrs{a} r-cran-viridislite{a} r-cran-withr{a} r-cran-xfun{a} r-cran-xtable{a} r-cran-yaml{a} r-cran-zoo{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpcg-cpp-dev libpng-tools libsasl2-modules libx11-protocol-perl lynx node-highlight.js node-jquery publicsuffix r-cran-actuar r-cran-ape r-cran-bench r-cran-bit r-cran-bit64 r-cran-bookdown r-cran-brio r-cran-broom r-cran-cairo r-cran-callr r-cran-covr r-cran-dbi r-cran-dbplyr r-cran-decor r-cran-dendextend r-cran-desc r-cran-devtools r-cran-dichromat r-cran-doparallel r-cran-downlit r-cran-dt r-cran-dygraphs r-cran-fields r-cran-forcats r-cran-foreach r-cran-formatr r-cran-formattable r-cran-furrr r-cran-ggalluvial r-cran-ggally r-cran-ggbeeswarm r-cran-ggthemes r-cran-gridgraphics r-cran-gridsvg r-cran-gsl r-cran-gstat r-cran-hexbin r-cran-hmisc r-cran-hms r-cran-irdisplay r-cran-iterators r-cran-itertools r-cran-jpeg r-cran-lintr r-cran-lobstr r-cran-locfit r-cran-lubridate r-cran-magick r-cran-mapproj r-cran-maps r-cran-markdown r-cran-mockery r-cran-mockr r-cran-multcomp r-cran-mvtnorm r-cran-network r-cran-palmerpenguins r-cran-pbmcapply r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-profvis r-cran-progress r-cran-ps r-cran-qpdf r-cran-quantreg r-cran-r.devices r-cran-r.rsp r-cran-r.utils r-cran-ragg r-cran-raster r-cran-readr r-cran-remotes r-cran-renv r-cran-rgenoud r-cran-rgl r-cran-rhpcblasctl r-cran-rmysql r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rsconnect r-cran-rsqlite r-cran-rstudioapi r-cran-rsvg r-cran-runit r-cran-rversions r-cran-sf r-cran-sm r-cran-sodium r-cran-spatial r-cran-spatstat r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spelling r-cran-svglite r-cran-terra r-cran-testit r-cran-testthat r-cran-thematic r-cran-tidyverse r-cran-tikzdevice r-cran-tinytest r-cran-truncdist r-cran-unitizer r-cran-usethis r-cran-vdiffr r-cran-venndiagram r-cran-waldo r-cran-webshot r-cran-webutils r-cran-whoami r-cran-xml2 r-cran-xts r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 381 newly installed, 0 to remove and 0 not upgraded. Need to get 289 MB of archives. After unpacking 1096 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.6-1 [813 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.3-1 [107 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.6-1 [2242 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.12.5-1 [26.7 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1-1 [23.1 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 12 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libtirpc3t64 i386 1.3.4+ds-1.3 [90.2 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libnsl2 i386 1.3.0-3+b2 [42.4 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.6-1 [1961 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.6-1 [669 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.12.5-1 [9588 B] Get: 22 http://deb.debian.org/debian unstable/main i386 python3 i386 3.12.5-1 [27.6 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 openssl i386 3.3.2-1 [1386 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20240203 [158 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.2-8 [102 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 autopoint all 0.22.5-2 [723 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 dctrl-tools i386 2.24-3 [105 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-2 [194 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-5 [9550 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg-3+b1 [704 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 debhelper all 13.20 [915 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 zip i386 3.0-14 [239 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 unzip i386 6.0-28 [166 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libpaper1 i386 1.1.29+b1 [13.0 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 1.1.29+b1 [9280 B] Get: 60 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b4 [309 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2 [148 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2 [116 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2 [105 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.2-1 [591 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8 [20.6 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-8 [61.0 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.18+dfsg-3 [200 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.63.0-1 [82.7 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.0-7 [226 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.9.1-2 [502 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.21-1 [48.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.82.0-1 [1568 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-4 [735 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.15-1 [72.4 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 9.0.0-1 [500 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.54.0+ds-2 [230 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.54.0+ds-2 [57.9 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.54.0+ds-2 [36.0 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libtcl8.6 i386 8.6.14+dfsg-1 [1095 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.4.0-0.1 [113 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.4.0-0.1 [318 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxft2 i386 2.3.6-1+b1 [55.3 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+23.1 [216 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libxss1 i386 1:1.2.3-1+b1 [17.3 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libtk8.6 i386 8.6.14-1 [826 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 r-base-core i386 4.4.1-2 [28.3 MB] Get: 117 http://deb.debian.org/debian unstable/main i386 libgfortran-14-dev i386 14.2.0-4 [800 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-4 [12.5 MB] Get: 119 http://deb.debian.org/debian unstable/main i386 gfortran-14 i386 14.2.0-4 [11.8 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 gfortran-i686-linux-gnu i386 4:14.1.0-2 [1284 B] Get: 121 http://deb.debian.org/debian unstable/main i386 gfortran i386 4:14.1.0-2 [1432 B] Get: 122 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libncurses6 i386 6.5-2 [111 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libncurses-dev i386 6.5-2 [380 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libreadline-dev i386 8.2-5 [166 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3 [303 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libjpeg-dev i386 1:2.1.5-3 [71.9 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 libpcre2-32-0 i386 10.42-4+b1 [233 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libpcre2-posix3 i386 10.42-4+b1 [55.8 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libpcre2-dev i386 10.42-4+b1 [759 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1 [915 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libpng-dev i386 1.6.43-5 [369 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-6 [32.1 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 liblzma-dev i386 5.6.2-2 [312 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 icu-devtools i386 72.1-5 [216 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libicu-dev i386 72.1-5 [10.6 MB] Get: 139 http://deb.debian.org/debian unstable/main i386 libxmuu1 i386 2:1.1.3-3+b2 [21.9 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 xauth i386 1:1.1.2-1 [36.7 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-3 [38.2 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-3 [30.3 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-3 [26.1 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libtirpc-dev i386 1.3.4+ds-1.3 [199 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libdeflate-dev i386 1.21-1 [57.1 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 r-base-dev all 4.4.1-2 [4516 B] Get: 147 http://deb.debian.org/debian unstable/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libswitch-perl all 2.17-3 [20.3 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libclone-perl i386 0.47-1 [13.7 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libio-html-perl all 1.004-3 [16.2 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 liburi-perl all 5.29-1 [103 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libhttp-message-perl all 6.46-1 [79.7 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 libparams-util-perl i386 1.102-3 [24.4 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libsub-install-perl all 0.929-1 [10.5 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libdata-optlist-perl all 0.114-1 [10.6 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libb-hooks-op-check-perl i386 0.22-3+b1 [10.7 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libdevel-callchecker-perl i386 0.009-1 [15.9 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libparams-classify-perl i386 0.015-2+b3 [23.1 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libpackage-stash-perl all 0.40-1 [22.0 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libclass-load-perl all 0.25-2 [15.3 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libclass-load-xs-perl i386 0.10-2+b3 [14.3 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get: 171 http://deb.debian.org/debian unstable/main i386 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get: 172 http://deb.debian.org/debian unstable/main i386 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 libclass-c3-perl all 0.35-2 [21.0 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 libmro-compat-perl all 0.15-2 [11.8 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get: 176 http://deb.debian.org/debian unstable/main i386 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 libsub-exporter-perl all 0.990-1 [50.6 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 libeval-closure-perl all 0.14-3 [11.2 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get: 181 http://deb.debian.org/debian unstable/main i386 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 libpackage-stash-xs-perl i386 0.30-1+b3 [20.5 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 libmoose-perl i386 2.2207-1+b1 [767 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 libvariable-magic-perl i386 0.64-1 [45.2 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get: 186 http://deb.debian.org/debian unstable/main i386 libsub-identify-perl i386 0.14-3+b2 [11.2 kB] Get: 187 http://deb.debian.org/debian unstable/main i386 libsub-name-perl i386 0.27-1+b2 [12.6 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 libnghttp3-9 i386 1.4.0-1 [74.3 kB] Get: 190 http://deb.debian.org/debian unstable/main i386 libngtcp2-16 i386 1.6.0-1 [154 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-gnutls8 i386 1.6.0-1 [20.2 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.9.1-2 [511 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 libwww-curl-perl i386 4.17-10+b2 [61.6 kB] Get: 194 http://deb.debian.org/debian unstable/main i386 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 dh-r all 20231212 [42.2 kB] Get: 196 http://deb.debian.org/debian unstable/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 javascript-common all 11+nmu1 [6260 B] Get: 200 http://deb.debian.org/debian unstable/main i386 libsuitesparseconfig7 i386 1:7.8.2+dfsg-1 [23.5 kB] Get: 201 http://deb.debian.org/debian unstable/main i386 libamd3 i386 1:7.8.2+dfsg-1 [42.9 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 libboost1.83-dev i386 1.83.0-3.2 [10.6 MB] Get: 203 http://deb.debian.org/debian unstable/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 204 http://deb.debian.org/debian unstable/main i386 libcolamd3 i386 1:7.8.2+dfsg-1 [35.1 kB] Get: 205 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 206 http://deb.debian.org/debian unstable/main i386 libglpk40 i386 5.0-1+b1 [420 kB] Get: 207 http://deb.debian.org/debian unstable/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 libjs-popper.js all 1.16.1+ds-6 [52.4 kB] Get: 209 http://deb.debian.org/debian unstable/main i386 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 libjs-d3 all 3.5.17-4 [132 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 libjs-es5-shim all 4.6.7-2 [47.4 kB] Get: 212 http://deb.debian.org/debian unstable/main i386 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get: 215 http://deb.debian.org/debian unstable/main i386 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB] Get: 216 http://deb.debian.org/debian unstable/main i386 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get: 217 http://deb.debian.org/debian unstable/main i386 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 libjs-modernizr all 3.13.0-0.1 [191 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB] Get: 223 http://deb.debian.org/debian unstable/main i386 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 liblua5.4-0 i386 5.4.6-3+b1 [169 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.48.0-6 [157 kB] Get: 226 http://deb.debian.org/debian unstable/main i386 libyaml-0-2 i386 0.2.5-1+b1 [55.2 kB] Get: 227 http://deb.debian.org/debian unstable/main i386 r-cran-littler i386 0.3.20-1 [92.3 kB] Get: 228 http://deb.debian.org/debian unstable/main i386 littler all 0.3.20-1 [16.0 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 node-bootstrap-sass all 3.4.3-2 [186 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 node-normalize.css all 8.0.1-5 [12.7 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 pandoc-data all 3.1.3-3 [446 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 pandoc i386 3.1.3+ds-3+b1 [35.7 MB] Get: 234 http://deb.debian.org/debian unstable/main i386 r-cran-abind all 1.4-5-2 [64.6 kB] Get: 235 http://deb.debian.org/debian unstable/main i386 r-cran-sys i386 3.4.2-1 [44.0 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 r-cran-askpass i386 1.2.0-1 [24.1 kB] Get: 237 http://deb.debian.org/debian unstable/main i386 r-cran-base64enc i386 0.1-3-3 [28.4 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 r-cran-bh all 1.84.0-1 [5912 B] Get: 239 http://deb.debian.org/debian unstable/main i386 r-cran-bitops i386 1.0-8-1 [30.9 kB] Get: 240 http://deb.debian.org/debian unstable/main i386 r-cran-rlang i386 1.1.4-1 [1727 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 r-cran-fastmap i386 1.2.0-1 [73.1 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 r-cran-cachem i386 1.1.0-1 [74.0 kB] Get: 243 http://deb.debian.org/debian unstable/main i386 r-cran-digest i386 0.6.37-1 [210 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 r-cran-htmltools i386 0.5.8.1-1 [378 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB] Get: 246 http://deb.debian.org/debian unstable/main i386 r-cran-jsonlite i386 1.8.8+dfsg-1 [446 kB] Get: 247 http://deb.debian.org/debian unstable/main i386 r-cran-cli i386 3.6.2-1 [1325 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 r-cran-glue i386 1.7.0-1 [157 kB] Get: 249 http://deb.debian.org/debian unstable/main i386 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] Get: 250 http://deb.debian.org/debian unstable/main i386 r-cran-memoise all 2.0.1-1 [53.8 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 r-cran-mime i386 0.12-2 [35.6 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 r-cran-fs i386 1.6.4+dfsg-1 [249 kB] Get: 253 http://deb.debian.org/debian unstable/main i386 r-cran-r6 all 2.5.1-1 [105 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 r-cran-rappdirs i386 0.3.3-1 [47.5 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 r-cran-sass i386 0.4.9+dfsg-1 [1015 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 r-cran-bslib all 0.7.0+dfsg-1 [4365 kB] Get: 257 http://deb.debian.org/debian unstable/main i386 r-cran-catools i386 1.18.2-1+b1 [203 kB] Get: 258 http://deb.debian.org/debian unstable/main i386 r-cran-cluster i386 2.1.6-1 [572 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 r-cran-codetools all 0.2-20-1 [91.1 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 r-cran-colorspace i386 2.1-0+dfsg-1 [1695 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 r-cran-gtable all 0.3.5+dfsg-1 [222 kB] Get: 262 http://deb.debian.org/debian unstable/main i386 r-cran-isoband i386 0.2.7-1 [1617 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 r-cran-mass i386 7.3-61-1 [1113 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 r-cran-lattice i386 0.22-6-1 [1393 kB] Get: 265 http://deb.debian.org/debian unstable/main i386 r-cran-nlme i386 3.1.166-1 [2329 kB] Get: 266 http://deb.debian.org/debian unstable/main i386 r-cran-matrix i386 1.7-0-3 [4265 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 r-cran-mgcv i386 1.9-1-1 [3256 kB] Get: 268 http://deb.debian.org/debian unstable/main i386 r-cran-farver i386 2.1.2-1 [1402 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 r-cran-labeling all 0.4.3-1 [62.4 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 r-cran-munsell all 0.5.1-1 [237 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 r-cran-viridislite all 0.4.2-2 [1299 kB] Get: 273 http://deb.debian.org/debian unstable/main i386 r-cran-scales all 1.3.0-1 [677 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 r-cran-fansi i386 1.0.5-1 [625 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 r-cran-magrittr i386 2.0.3-1 [201 kB] Get: 276 http://deb.debian.org/debian unstable/main i386 r-cran-utf8 i386 1.2.4-1 [135 kB] Get: 277 http://deb.debian.org/debian unstable/main i386 r-cran-vctrs i386 0.6.5-1 [1393 kB] Get: 278 http://deb.debian.org/debian unstable/main i386 r-cran-pillar all 1.9.0+dfsg-1 [463 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 r-cran-tibble i386 3.2.1+dfsg-2 [421 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 r-cran-withr all 3.0.0+dfsg-1 [240 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 r-cran-ggplot2 all 3.5.1+dfsg-1 [3933 kB] Get: 283 http://deb.debian.org/debian unstable/main i386 r-cran-evaluate all 0.24.0-1 [93.7 kB] Get: 284 http://deb.debian.org/debian unstable/main i386 r-cran-xfun i386 0.47+dfsg-1 [527 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 r-cran-highr all 0.11+dfsg-1 [38.3 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 r-cran-yaml i386 2.3.8-2 [111 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 r-cran-knitr all 1.48+dfsg-1 [912 kB] Get: 288 http://deb.debian.org/debian unstable/main i386 r-cran-fontawesome all 0.5.2-1 [1286 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 r-cran-tinytex all 0.51-1 [146 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] Get: 291 http://deb.debian.org/debian unstable/main i386 r-cran-rcpp i386 1.0.13-1 [2086 kB] Get: 292 http://deb.debian.org/debian unstable/main i386 r-cran-later i386 1.3.2+dfsg-1 [121 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 r-cran-promises i386 1.3.0+dfsg-1 [285 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 r-cran-httpuv i386 1.6.15+dfsg-1 [505 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 r-cran-xtable all 1:1.8-4-2 [689 kB] Get: 296 http://deb.debian.org/debian unstable/main i386 r-cran-sourcetools i386 0.1.7-1-1 [47.1 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 r-cran-crayon all 1.5.2-1 [165 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 r-cran-commonmark i386 1.9.1-1 [123 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 r-cran-shiny all 1.8.1.1+dfsg-1 [2894 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 r-cran-rmarkdown all 2.28+dfsg-1 [1474 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] Get: 302 http://deb.debian.org/debian unstable/main i386 r-cran-miniui all 0.1.1.1-3 [35.9 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 r-cran-shinyjs all 2.1.0-1 [1009 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 r-cran-colourpicker all 1.3.0+dfsg-1 [1212 kB] Get: 305 http://deb.debian.org/debian unstable/main i386 r-cran-cowplot all 1.1.3+dfsg-1 [638 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 r-cran-cpp11 all 0.4.7-1 [219 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 r-cran-lazyeval i386 0.2.2-1+b1 [142 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 r-cran-crosstalk all 1.2.1+dfsg-1 [175 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 r-cran-curl i386 5.2.1+dfsg-1 [181 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 r-cran-data.table i386 1.15.4+dfsg-2.2 [1869 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 r-cran-deldir i386 2.0-4-1 [287 kB] Get: 312 http://deb.debian.org/debian unstable/main i386 r-cran-dotcall64 i386 1.1-1-1 [34.3 kB] Get: 313 http://deb.debian.org/debian unstable/main i386 r-cran-generics all 0.1.3-1 [81.4 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 r-cran-tidyselect i386 1.2.1+dfsg-1 [223 kB] Get: 315 http://deb.debian.org/debian unstable/main i386 r-cran-dplyr i386 1.1.4-1 [1526 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 r-cran-sitmo i386 2.0.2-1+b1 [131 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 r-cran-dqrng i386 0.3.2+dfsg-1 [134 kB] Get: 318 http://deb.debian.org/debian unstable/main i386 r-cran-stringi i386 1.8.4-1 [904 kB] Get: 319 http://deb.debian.org/debian unstable/main i386 r-cran-stringr all 1.5.1-1 [296 kB] Get: 320 http://deb.debian.org/debian unstable/main i386 r-cran-fastdummies all 1.7.4-1 [49.0 kB] Get: 321 http://deb.debian.org/debian unstable/main i386 r-cran-survival i386 3.7-0-1 [6316 kB] Get: 322 http://deb.debian.org/debian unstable/main i386 r-cran-fitdistrplus all 1.2-1-1 [2028 kB] Get: 323 http://deb.debian.org/debian unstable/main i386 r-cran-fnn i386 1.1.4-1 [127 kB] Get: 324 http://deb.debian.org/debian unstable/main i386 r-cran-globals all 0.16.3-1 [120 kB] Get: 325 http://deb.debian.org/debian unstable/main i386 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] Get: 326 http://deb.debian.org/debian unstable/main i386 r-cran-parallelly i386 1.38.0-1 [388 kB] Get: 327 http://deb.debian.org/debian unstable/main i386 r-cran-future all 1.34.0+dfsg-1 [649 kB] Get: 328 http://deb.debian.org/debian unstable/main i386 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] Get: 329 http://deb.debian.org/debian unstable/main i386 r-cran-gtools i386 3.9.5-1 [362 kB] Get: 330 http://deb.debian.org/debian unstable/main i386 r-cran-gdata all 3.0.0-1 [502 kB] Get: 331 http://deb.debian.org/debian unstable/main i386 r-cran-ggrepel i386 0.9.5-2 [253 kB] Get: 332 http://deb.debian.org/debian unstable/main i386 r-cran-ggridges all 0.5.6-1 [2204 kB] Get: 333 http://deb.debian.org/debian unstable/main i386 r-cran-goftest i386 1.2-3-1+b1 [59.5 kB] Get: 334 http://deb.debian.org/debian unstable/main i386 r-cran-kernsmooth i386 2.23-24-1 [92.0 kB] Get: 335 http://deb.debian.org/debian unstable/main i386 r-cran-gplots all 3.1.3.1-1 [607 kB] Get: 336 http://deb.debian.org/debian unstable/main i386 r-cran-gridextra all 2.3-3 [1024 kB] Get: 337 http://deb.debian.org/debian unstable/main i386 r-cran-rprojroot all 2.0.4-1 [124 kB] Get: 338 http://deb.debian.org/debian unstable/main i386 r-cran-here all 1.0.1-2 [48.7 kB] Get: 339 http://deb.debian.org/debian unstable/main i386 r-cran-openssl i386 2.2.0+dfsg-1 [403 kB] Get: 340 http://deb.debian.org/debian unstable/main i386 r-cran-httr all 1.4.7+dfsg-1 [459 kB] Get: 341 http://deb.debian.org/debian unstable/main i386 r-cran-ica all 1.0-3-1 [86.7 kB] Get: 342 http://deb.debian.org/debian unstable/main i386 r-cran-igraph i386 2.0.3-1 [5265 kB] Get: 343 http://deb.debian.org/debian unstable/main i386 r-cran-irlba i386 2.3.5.1-4 [296 kB] Get: 344 http://deb.debian.org/debian unstable/main i386 r-cran-rcpptoml i386 0.2.2+dfsg-1 [113 kB] Get: 345 http://deb.debian.org/debian unstable/main i386 r-cran-png i386 0.1-8-1+b1 [42.2 kB] Get: 346 http://deb.debian.org/debian unstable/main i386 r-cran-reticulate i386 1.39.0+dfsg-1 [1519 kB] Get: 347 http://deb.debian.org/debian unstable/main i386 r-cran-leiden all 0.4.3.1+dfsg-1 [71.6 kB] Get: 348 http://deb.debian.org/debian unstable/main i386 r-cran-zoo i386 1.8-12-2 [987 kB] Get: 349 http://deb.debian.org/debian unstable/main i386 r-cran-lmtest i386 0.9.40-1 [399 kB] Get: 350 http://deb.debian.org/debian unstable/main i386 r-cran-matrixstats i386 1.3.0-1 [512 kB] Get: 351 http://deb.debian.org/debian unstable/main i386 r-cran-patchwork all 1.2.0-1 [3345 kB] Get: 352 http://deb.debian.org/debian unstable/main i386 r-cran-pbapply all 1.7-2-1 [103 kB] Get: 353 http://deb.debian.org/debian unstable/main i386 r-cran-purrr i386 1.0.2-1 [509 kB] Get: 354 http://deb.debian.org/debian unstable/main i386 r-cran-tidyr i386 1.3.1-1 [1164 kB] Get: 355 http://deb.debian.org/debian unstable/main i386 r-cran-plotly all 4.10.4+dfsg-2 [3634 kB] Get: 356 http://deb.debian.org/debian unstable/main i386 r-cran-plyr i386 1.8.9-1 [832 kB] Get: 357 http://deb.debian.org/debian unstable/main i386 r-cran-polyclip i386 1.10-7-1 [123 kB] Get: 358 http://deb.debian.org/debian unstable/main i386 r-cran-progressr all 0.14.0-1 [337 kB] Get: 359 http://deb.debian.org/debian unstable/main i386 r-cran-rann i386 2.6.2-1 [45.8 kB] Get: 360 http://deb.debian.org/debian unstable/main i386 r-cran-rcppannoy i386 0.0.22-1 [236 kB] Get: 361 http://deb.debian.org/debian unstable/main i386 r-cran-rcpparmadillo i386 14.0.0-1-1 [886 kB] Get: 362 http://deb.debian.org/debian unstable/main i386 r-cran-rcppeigen i386 0.3.4.0.2-1 [1405 kB] Get: 363 http://deb.debian.org/debian unstable/main i386 r-cran-rcpphnsw i386 0.5.0+ds-1 [167 kB] Get: 364 http://deb.debian.org/debian unstable/main i386 r-cran-rcppprogress all 0.4.2-2 [21.8 kB] Get: 365 http://deb.debian.org/debian unstable/main i386 r-cran-reshape2 i386 1.4.4-2 [115 kB] Get: 366 http://deb.debian.org/debian unstable/main i386 r-cran-rocr all 1.0-11-3 [457 kB] Get: 367 http://deb.debian.org/debian unstable/main i386 r-cran-rspectra i386 0.16-1-1 [378 kB] Get: 368 http://deb.debian.org/debian unstable/main i386 r-cran-rtsne i386 0.17-1 [109 kB] Get: 369 http://deb.debian.org/debian unstable/main i386 r-cran-scattermore i386 1.2-1 [329 kB] Get: 370 http://deb.debian.org/debian unstable/main i386 r-cran-sctransform i386 0.4.1-1 [506 kB] Get: 371 http://deb.debian.org/debian unstable/main i386 r-cran-sp i386 1:2.1-2+dfsg-1 [1452 kB] Get: 372 http://deb.debian.org/debian unstable/main i386 r-cran-spam i386 2.10-0-1 [2761 kB] Get: 373 http://deb.debian.org/debian unstable/main i386 r-cran-seuratobject i386 5.0.2-1 [1747 kB] Get: 374 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.utils i386 3.0-4-1 [360 kB] Get: 375 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.data all 3.0-4-1 [4074 kB] Get: 376 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.geom i386 3.2-9-2 [3962 kB] Get: 377 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.random i386 3.2-3-1 [1177 kB] Get: 378 http://deb.debian.org/debian unstable/main i386 r-cran-tensor all 1.5-4 [15.6 kB] Get: 379 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.sparse i386 3.0-3-1 [215 kB] Get: 380 http://deb.debian.org/debian unstable/main i386 r-cran-spatstat.explore i386 3.2-7-1 [3457 kB] Get: 381 http://deb.debian.org/debian unstable/main i386 r-cran-uwot i386 0.2.2-1 [957 kB] Fetched 289 MB in 21s (13.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19722 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.6-1_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.6-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.3-1_i386.deb ... Unpacking libexpat1:i386 (2.6.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.6-1_i386.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:i386 (3.12.6-1) ... Setting up libexpat1:i386 (2.6.3-1) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20042 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.5-1_i386.deb ... Unpacking python3-minimal (3.12.5-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-3_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b2_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.6-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.6-1_i386.deb ... Unpacking python3.12 (3.12.6-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.5-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.5-1) ... Setting up python3-minimal (3.12.5-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21114 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.5-1_i386.deb ... Unpacking python3 (3.12.5-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-1_i386.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_i386.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_i386.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-8_i386.deb ... Unpacking bsdextrautils (2.40.2-8) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../011-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package ucf. Preparing to unpack .../013-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../014-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../015-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../016-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../017-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../018-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../019-dctrl-tools_2.24-3_i386.deb ... Unpacking dctrl-tools (2.24-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../020-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../021-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../022-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../023-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../024-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../025-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../026-libelf1t64_0.191-2_i386.deb ... Unpacking libelf1t64:i386 (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../027-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../028-libicu72_72.1-5_i386.deb ... Unpacking libicu72:i386 (72.1-5) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../029-libxml2_2.12.7+dfsg-3+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg-3+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../030-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../031-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../032-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../033-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zip. Preparing to unpack .../034-zip_3.0-14_i386.deb ... Unpacking zip (3.0-14) ... Selecting previously unselected package unzip. Preparing to unpack .../035-unzip_6.0-28_i386.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package libpaper1:i386. Preparing to unpack .../036-libpaper1_1.1.29+b1_i386.deb ... Unpacking libpaper1:i386 (1.1.29+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../037-libpaper-utils_1.1.29+b1_i386.deb ... Unpacking libpaper-utils (1.1.29+b1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../038-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../039-libblas3_3.12.0-3_i386.deb ... Unpacking libblas3:i386 (3.12.0-3) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../040-libbrotli1_1.1.0-2+b4_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b4) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../041-libpng16-16t64_1.6.43-5_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.43-5) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../042-libfreetype6_2.13.3+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../043-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../044-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. 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Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.32-1) ... Setting up node-html5shiv (3.7.3+dfsg-5) ... Setting up libpsl5t64:i386 (0.21.2-1.1) ... Setting up libnghttp2-14:i386 (1.63.0-1) ... Setting up libdeflate0:i386 (1.21-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... Setting up libxcb-shm0:i386 (1.17.0-2) ... Setting up libcom-err2:i386 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjs-modernizr (3.13.0-0.1) ... Setting up libjbig0:i386 (2.1-6.1+b1) ... Setting up libpcre2-16-0:i386 (10.42-4+b1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libelf1t64:i386 (0.191-2) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up libjs-es5-shim (4.6.7-2) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-8) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Sep 11 06:29:17 UTC 2024. Universal Time is now: Wed Sep 11 06:29:17 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up zip (3.0-14) ... Setting up libpackage-stash-xs-perl:i386 (0.30-1+b3) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:i386 (10.42-4+b1) ... Setting up libglib2.0-0t64:i386 (2.82.0-1) ... No schema files found: doing nothing. Setting up libblas3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libpkgconf3:i386 (1.8.1-3) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-3) ... Setting up libswitch-perl (2.17-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:i386 (1:2.1.5-3) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libncurses6:i386 (6.5-2) ... Setting up libfribidi0:i386 (1.0.15-1) ... Setting up libjs-d3 (3.5.17-4) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.43-5) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up libio-html-perl (1.004-3) ... Setting up libtcl8.6:i386 (8.6.14+dfsg-1) ... Setting up autopoint (0.22.5-2) ... Setting up libb-hooks-op-check-perl:i386 (0.22-3+b1) ... Setting up icu-devtools (72.1-5) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-3) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libltdl7:i386 (2.4.7-7+b1) ... Setting up libparams-util-perl (1.102-3) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-8) ... Setting up libgfortran5:i386 (14.2.0-4) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:i386 (1.4.0-1) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libwebp7:i386 (1.4.0-0.1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up liblzma-dev:i386 (5.6.2-2) ... Setting up libsub-name-perl:i386 (0.27-1+b2) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpcre2-posix3:i386 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:i386 (4.5.1+git230720-5) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libsuitesparseconfig7:i386 (1:7.8.2+dfsg-1) ... Setting up liblua5.4-0:i386 (5.4.6-3+b1) ... Setting up libx11-6:i386 (2:1.8.7-1+b1) ... Setting up libthai-data (0.1.29-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up netbase (6.4) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libngtcp2-16:i386 (1.6.0-1) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libboost-dev:i386 (1.83.0.2+b2) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up libssh2-1t64:i386 (1.11.0-7) ... Setting up pandoc-data (3.1.3-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up openssl (3.3.2-1) ... Setting up libdeflate-dev:i386 (1.21-1) ... Setting up node-normalize.css (8.0.1-5) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:i386 (72.1-5) ... Setting up libxml2:i386 (2.12.7+dfsg-3+b1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.29-1) ... Setting up libxmuu1:i386 (2:1.1.3-3+b2) ... Setting up libngtcp2-crypto-gnutls8:i386 (1.6.0-1) ... Setting up libblas-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libbz2-dev:i386 (1.0.8-6) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:i386 (14.2.0-4) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libice6:i386 (2:1.0.10-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up liblapack3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libncurses-dev:i386 (6.5-2) ... Setting up gettext (0.22.5-2) ... Setting up libamd3:i386 (1:7.8.2+dfsg-1) ... Setting up libpcre2-dev:i386 (10.42-4+b1) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libcolamd3:i386 (1:7.8.2+dfsg-1) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libpng-dev:i386 (1.6.43-5) ... Setting up libjpeg-dev:i386 (1:2.1.5-3) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libdevel-callchecker-perl:i386 (0.009-1) ... Setting up libldap-2.5-0:i386 (2.5.18+dfsg-3) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:i386 (1.8.1-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:i386 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up pandoc (3.1.3+ds-3+b1) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libglpk40:i386 (5.0-1+b1) ... Setting up liblapack-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up gfortran-14-i686-linux-gnu (14.2.0-4) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up xauth (1:1.1.2-1) ... Setting up groff-base (1.23.0-5) ... Setting up libharfbuzz0b:i386 (9.0.0-1) ... Setting up libxss1:i386 (1:1.2.3-1+b1) ... Setting up libfontconfig1:i386 (2.15.0-1.1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up gfortran-14 (14.2.0-4) ... Setting up libsm6:i386 (2:1.2.3-1+b1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up libpaper1:i386 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxft2:i386 (2.3.6-1+b1) ... Setting up libcurl4t64:i386 (8.9.1-2) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:i386 (8.6.14-1) ... Setting up libparams-classify-perl:i386 (0.015-2+b3) ... Setting up libpango-1.0-0:i386 (1.54.0+ds-2) ... Setting up libcurl3t64-gnutls:i386 (8.9.1-2) ... Setting up libwww-curl-perl:i386 (4.17-10+b2) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libreadline-dev:i386 (8.2-5) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.2-1) ... Setting up libtirpc-dev:i386 (1.3.4+ds-1.3) ... Setting up gfortran-i686-linux-gnu (4:14.1.0-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libnsl2:i386 (1.3.0-3+b2) ... Setting up libpangoft2-1.0-0:i386 (1.54.0+ds-2) ... Setting up libpangocairo-1.0-0:i386 (1.54.0+ds-2) ... Setting up libpython3.12-stdlib:i386 (3.12.6-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up python3.12 (3.12.6-1) ... Setting up debhelper (13.20) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up gfortran (4:14.1.0-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libclass-load-perl (0.25-2) ... Setting up r-base-core (4.4.1-2) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-labeling (0.4.3-1) ... Setting up r-cran-rcppprogress (0.4.2-2) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up r-cran-lattice (0.22-6-1) ... Setting up r-cran-nlme (3.1.166-1) ... Setting up r-cran-farver (2.1.2-1) ... Setting up r-cran-pbapply (1.7-2-1) ... Setting up r-cran-spatstat.utils (3.0-4-1) ... Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up r-cran-viridislite (0.4.2-2) ... Setting up r-cran-cluster (2.1.6-1) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libclass-load-xs-perl (0.10-2+b3) ... Setting up r-cran-tensor (1.5-4) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up r-cran-commonmark (1.9.1-1) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.4-1) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up libpython3-stdlib:i386 (3.12.5-1) ... Setting up r-cran-littler (0.3.20-1) ... Setting up r-cran-bh (1.84.0-1) ... Setting up r-cran-fs (1.6.4+dfsg-1) ... Setting up r-cran-rcpp (1.0.13-1) ... Setting up r-cran-curl (5.2.1+dfsg-1) ... Setting up r-cran-codetools (0.2-20-1) ... Setting up r-cran-rlang (1.1.4-1) ... Setting up r-cran-matrixstats (1.3.0-1) ... Setting up r-base-dev (4.4.1-2) ... Setting up r-cran-listenv (0.9.1+dfsg-1) ... Setting up littler (0.3.20-1) ... Setting up r-cran-xfun (0.47+dfsg-1) ... Setting up r-cran-rcpphnsw (0.5.0+ds-1) ... Setting up r-cran-sys (3.4.2-1) ... Setting up r-cran-withr (3.0.0+dfsg-1) ... Setting up r-cran-mime (0.12-2) ... Setting up libmoose-perl:i386 (2.2207-1+b1) ... Setting up r-cran-generics (0.1.3-1) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-abind (1.4-5-2) ... Setting up r-cran-digest (0.6.37-1) ... Setting up r-cran-yaml (2.3.8-2) ... Setting up r-cran-ica (1.0-3-1) ... Setting up r-cran-rann (2.6.2-1) ... Setting up r-cran-evaluate (0.24.0-1) ... Setting up r-cran-highr (0.11+dfsg-1) ... Setting up r-cran-fansi (1.0.5-1) ... Setting up r-cran-mass (7.3-61-1) ... Setting up python3 (3.12.5-1) ... Setting up r-cran-gtools (3.9.5-1) ... Setting up r-cran-data.table (1.15.4+dfsg-2.2) ... Setting up r-cran-glue (1.7.0-1) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up r-cran-polyclip (1.10-7-1) ... Setting up r-cran-cli (3.6.2-1) ... Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... Setting up r-cran-dotcall64 (1.1-1-1) ... Setting up r-cran-bitops (1.0-8-1) ... Setting up r-cran-rprojroot (2.0.4-1) ... Setting up r-cran-fnn (1.1.4-1) ... Setting up r-cran-progressr (0.14.0-1) ... Setting up r-cran-deldir (2.0-4-1) ... Setting up r-cran-goftest (1.2-3-1+b1) ... Setting up r-cran-askpass (1.2.0-1) ... Setting up r-cran-fastmap (1.2.0-1) ... Setting up r-cran-png (0.1-8-1+b1) ... Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up r-cran-sp (1:2.1-2+dfsg-1) ... Setting up r-cran-utf8 (1.2.4-1) ... Setting up r-cran-colorspace (2.1-0+dfsg-1) ... Setting up r-cran-parallelly (1.38.0-1) ... Setting up r-cran-stringi (1.8.4-1) ... Setting up r-cran-cpp11 (0.4.7-1) ... Setting up r-cran-sitmo (2.0.2-1+b1) ... Setting up r-cran-plyr (1.8.9-1) ... Setting up r-cran-rcolorbrewer (1.1-3-1) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-gtable (0.3.5+dfsg-1) ... Setting up r-cran-zoo (1.8-12-2) ... Setting up r-cran-later (1.3.2+dfsg-1) ... Setting up r-cran-matrix (1.7-0-3) ... Setting up r-cran-spatstat.sparse (3.0-3-1) ... Setting up r-cran-here (1.0.1-2) ... Setting up r-cran-htmltools (0.5.8.1-1) ... Setting up r-cran-tinytex (0.51-1) ... Setting up r-cran-irlba (2.3.5.1-4) ... Setting up r-cran-kernsmooth (2.23-24-1) ... Setting up r-cran-knitr (1.48+dfsg-1) ... Setting up r-cran-rcpptoml (0.2.2+dfsg-1) ... Setting up r-cran-mgcv (1.9-1-1) ... Setting up r-cran-cachem (1.1.0-1) ... Setting up r-cran-lmtest (0.9.40-1) ... Setting up r-cran-sass (0.4.9+dfsg-1) ... Setting up r-cran-catools (1.18.2-1+b1) ... Setting up r-cran-rtsne (0.17-1) ... Setting up r-cran-rcpparmadillo (14.0.0-1-1) ... Setting up r-cran-dqrng (0.3.2+dfsg-1) ... Setting up r-cran-reticulate (1.39.0+dfsg-1) ... Setting up r-cran-globals (0.16.3-1) ... Setting up r-cran-spam (2.10-0-1) ... Setting up r-cran-gdata (3.0.0-1) ... Setting up r-cran-vctrs (0.6.5-1) ... Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... Setting up r-cran-pillar (1.9.0+dfsg-1) ... Setting up r-cran-rcppannoy (0.0.22-1) ... Setting up r-cran-openssl (2.2.0+dfsg-1) ... Setting up r-cran-stringr (1.5.1-1) ... Setting up libwww-curl-simple-perl (0.100191-3) ... Setting up r-cran-munsell (0.5.1-1) ... Setting up r-cran-tibble (3.2.1+dfsg-2) ... Setting up r-cran-fontawesome (0.5.2-1) ... Setting up r-cran-survival (3.7-0-1) ... Setting up r-cran-igraph (2.0.3-1) ... Setting up r-cran-future (1.34.0+dfsg-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... Setting up r-cran-reshape2 (1.4.4-2) ... Setting up r-cran-future.apply (1.11.2+dfsg-1) ... Setting up r-cran-httr (1.4.7+dfsg-1) ... Setting up r-cran-gridextra (2.3-3) ... Setting up r-cran-scales (1.3.0-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-promises (1.3.0+dfsg-1) ... Setting up r-cran-purrr (1.0.2-1) ... Setting up r-cran-spatstat.data (3.0-4-1) ... Setting up r-cran-fastdummies (1.7.4-1) ... Setting up r-cran-seuratobject (5.0.2-1) ... Setting up r-cran-spatstat.geom (3.2-9-2) ... Setting up r-cran-dplyr (1.1.4-1) ... Setting up r-cran-rspectra (0.16-1-1) ... Setting up dh-r (20231212) ... Setting up r-cran-gplots (3.1.3.1-1) ... Setting up r-cran-uwot (0.2.2-1) ... Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... Setting up r-cran-rocr (1.0-11-3) ... Setting up r-cran-fitdistrplus (1.2-1-1) ... Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... Setting up r-cran-scattermore (1.2-1) ... Setting up r-cran-httpuv (1.6.15+dfsg-1) ... Setting up r-cran-spatstat.random (3.2-3-1) ... Setting up r-cran-bslib (0.7.0+dfsg-1) ... Setting up r-cran-spatstat.explore (3.2-7-1) ... Setting up r-cran-ggrepel (0.9.5-2) ... Setting up r-cran-tidyr (1.3.1-1) ... Setting up r-cran-ggridges (0.5.6-1) ... Setting up r-cran-cowplot (1.1.3+dfsg-1) ... Setting up r-cran-sctransform (0.4.1-1) ... Setting up r-cran-patchwork (1.2.0-1) ... Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... Setting up r-cran-shinyjs (2.1.0-1) ... Setting up r-cran-miniui (0.1.1.1-3) ... Setting up r-cran-rmarkdown (2.28+dfsg-1) ... Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... Setting up r-cran-plotly (4.10.4+dfsg-2) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/23433/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/23433/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/r-cran-seurat-5.1.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-cran-seurat_5.1.0-1_source.changes dpkg-buildpackage: info: source package r-cran-seurat dpkg-buildpackage: info: source version 5.1.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Charles Plessy dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install --destdir=debian/r-cran-seurat/ -O--buildsystem=R I: R packages needed for DEP8: ape, rsvd, testthat, hdf5r, s4vectors, summarizedexperiment, singlecellexperiment, deseq2, biocgenerics, genomicranges, genomeinfodb, iranges, rtracklayer, monocle, biobase, vgam, limma, metap, mixtools, ggrastr, data.table, r.utils, delayedarray I: R Package: Seurat Version: 5.1.0 I: Building using R version 4.4.1-2 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Wed, 11 Sep 2024 08:37:35 +0900 mkdir -p /build/reproducible-path/r-cran-seurat-5.1.0/debian/r-cran-seurat/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-cran-seurat-5.1.0/debian/r-cran-seurat/usr/lib/R/site-library --clean . "--built-timestamp='Wed, 11 Sep 2024 08:37:35 +0900'" * installing *source* package 'Seurat' ... ** package 'Seurat' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Debian 14.2.0-4) 14.2.0' using C++ compiler: 'g++ (Debian 14.2.0-4) 14.2.0' using C++17 make[1]: Entering directory '/build/reproducible-path/r-cran-seurat-5.1.0/src' g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ModularityOptimizer.cpp -o ModularityOptimizer.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RModularityOptimizer.cpp -o RModularityOptimizer.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c data_manipulation.cpp -o data_manipulation.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fast_NN_dist.cpp -o fast_NN_dist.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c integration.cpp -o integration.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c snn.cpp -o snn.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stats.cpp -o stats.o gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c valid_pointer.c -o valid_pointer.o g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-z,relro -o Seurat.so ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o stats.o valid_pointer.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-cran-seurat-5.1.0/src' make[1]: Entering directory '/build/reproducible-path/r-cran-seurat-5.1.0/src' make[1]: Leaving directory '/build/reproducible-path/r-cran-seurat-5.1.0/src' installing to /build/reproducible-path/r-cran-seurat-5.1.0/debian/r-cran-seurat/usr/lib/R/site-library/00LOCK-r-cran-seurat-5.1.0/00new/Seurat/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Seurat) rm -f /build/reproducible-path/r-cran-seurat-5.1.0/debian/r-cran-seurat/usr/lib/R/site-library/Seurat/LICENSE W: Ignoring specified R dependency: R (>= 4.0.0) I: Using r-cran-seuratobject for Depends:SeuratObject (>= 5.0.2) I: Using r-cran-ape for Recommends:ape I: Using r-cran-rsvd for Recommends:rsvd I: Using r-cran-testthat for Recommends:testthat I: Using r-cran-hdf5r for Recommends:hdf5r I: Using r-bioc-s4vectors for Recommends:s4vectors I: Using r-bioc-summarizedexperiment for Recommends:summarizedexperiment I: Using r-bioc-singlecellexperiment for Recommends:singlecellexperiment W: Please install devscripts to enable an attempt to create debian package for Recommends:deseq2. I: Using r-bioc-biocgenerics for Recommends:biocgenerics W: Please install devscripts to enable an attempt to create debian package for Recommends:genomicranges. I: Using r-bioc-genomeinfodb for Recommends:genomeinfodb W: Please install devscripts to enable an attempt to create debian package for Recommends:iranges. W: Please install devscripts to enable an attempt to create debian package for Recommends:rtracklayer. W: Please install devscripts to enable an attempt to create debian package for Recommends:monocle. I: Using r-bioc-biobase for Recommends:biobase I: Using r-cran-vgam for Recommends:vgam W: Please install devscripts to enable an attempt to create debian package for Recommends:limma. I: Using r-cran-metap for Recommends:metap I: Using r-cran-mixtools for Recommends:mixtools I: Using r-cran-ggrastr for Recommends:ggrastr I: Using r-cran-data.table for Recommends:data.table I: Using r-cran-r.utils for Recommends:r.utils W: Please install devscripts to enable an attempt to create debian package for Recommends:delayedarray. W: Cannot find a debian package for Suggests:arrow W: Cannot find a debian package for Suggests:BPCells W: Cannot find a debian package for Suggests:MAST W: Cannot find a debian package for Suggests:Rfast2 W: Cannot find a debian package for Suggests:enrichR W: Cannot find a debian package for Suggests:presto W: Cannot find a debian package for Suggests:harmony I: Using r-cran-cluster for Imports:cluster I: Using r-cran-cowplot for Imports:cowplot I: Using r-cran-fastdummies for Imports:fastDummies I: Using r-cran-fitdistrplus for Imports:fitdistrplus I: Using r-cran-future for Imports:future I: Using r-cran-future.apply for Imports:future.apply I: Using r-cran-generics for Imports:generics (>= 0.1.3) I: Using r-cran-ggplot2 for Imports:ggplot2 (>= 3.3.0) I: Using r-cran-ggrepel for Imports:ggrepel I: Using r-cran-ggridges for Imports:ggridges I: Using r-cran-httr for Imports:httr I: Using r-cran-ica for Imports:ica I: Using r-cran-igraph for Imports:igraph I: Using r-cran-irlba for Imports:irlba I: Using r-cran-jsonlite for Imports:jsonlite I: Using r-cran-kernsmooth for Imports:KernSmooth I: Using r-cran-leiden for Imports:leiden (>= 0.3.1) I: Using r-cran-lifecycle for Imports:lifecycle I: Using r-cran-lmtest for Imports:lmtest I: Using r-cran-mass for Imports:MASS I: Version replacement between package version 1.5-0 and Debian version 1.7-0-3 suspicious. Do not replace anything. I: Using r-cran-matrix by changing version to (>= 1.5-0) for Imports:Matrix (>= 1.5-0) I: Using r-cran-matrixstats for Imports:matrixStats I: Using r-cran-miniui for Imports:miniUI I: Using r-cran-patchwork for Imports:patchwork I: Using r-cran-pbapply for Imports:pbapply I: Using r-cran-plotly for Imports:plotly (>= 4.9.0) I: Using r-cran-png for Imports:png I: Using r-cran-progressr for Imports:progressr I: Using r-cran-purrr for Imports:purrr I: Using r-cran-rann for Imports:RANN I: Using r-cran-rcolorbrewer by changing version to for Imports:RColorBrewer I: Using r-cran-rcpp for Imports:Rcpp (>= 1.0.7) I: Using r-cran-rcppannoy for Imports:RcppAnnoy (>= 0.0.18) I: Using r-cran-rcpphnsw for Imports:RcppHNSW I: Using r-cran-reticulate for Imports:reticulate I: Using r-cran-rlang for Imports:rlang I: Using r-cran-rocr for Imports:ROCR I: Using r-cran-rspectra for Imports:RSpectra I: Using r-cran-rtsne for Imports:Rtsne I: Using r-cran-scales for Imports:scales I: Using r-cran-scattermore for Imports:scattermore (>= 1.2) I: Using r-cran-sctransform for Imports:sctransform (>= 0.4.1) I: Using r-cran-shiny for Imports:shiny I: Using r-cran-spatstat.explore for Imports:spatstat.explore I: Using r-cran-spatstat.geom for Imports:spatstat.geom I: Using r-cran-tibble for Imports:tibble I: Using r-cran-uwot for Imports:uwot (>= 0.1.10) I: Using r-cran-rcpp for LinkingTo:Rcpp (>= 0.11.0) I: Using r-cran-rcppeigen for LinkingTo:RcppEigen I: Using r-cran-rcppprogress for LinkingTo:RcppProgress I: Use r-cran-seurat as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R dh_fixperms -O--buildsystem=R dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-cran-seurat-dbgsym' in '../r-cran-seurat-dbgsym_5.1.0-1_i386.deb'. dpkg-deb: building package 'r-cran-seurat' in '../r-cran-seurat_5.1.0-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../r-cran-seurat_5.1.0-1_i386.buildinfo dpkg-genchanges --build=binary -O../r-cran-seurat_5.1.0-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/23433/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/23433/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23433 and its subdirectories I: Current time: Wed Sep 11 20:31:44 +14 2024 I: pbuilder-time-stamp: 1726036304