I: pbuilder: network access will be disabled during build I: Current time: Fri May 31 12:21:21 -12 2024 I: pbuilder-time-stamp: 1717201281 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ssm_1.4.0-2.dsc] I: copying [./ssm_1.4.0.orig.tar.gz] I: copying [./ssm_1.4.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Nov 18 07:49:02 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./ssm_1.4.0-2.dsc: no acceptable signature found dpkg-source: info: extracting ssm in ssm-1.4.0 dpkg-source: info: unpacking ssm_1.4.0.orig.tar.gz dpkg-source: info: unpacking ssm_1.4.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2888/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='e8245809bfdb4a66aad4c68cdaccdc34' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2888' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.p4caEnqp/pbuilderrc_rF5s --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.p4caEnqp/b1 --logfile b1/build.log ssm_1.4.0-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux ff4a 6.1.0-21-armmp-lpae #1 SMP Debian 6.1.90-1 (2024-05-03) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 26 07:45 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2888/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libccp4-dev, libmmdb2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19464 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libccp4-dev; however: Package libccp4-dev is not installed. pbuilder-satisfydepends-dummy depends on libmmdb2-dev; however: Package libmmdb2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmmdb2-0{a} libmmdb2-dev{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After unpacking 72.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.1-4 [87.4 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg-2 [583 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libccp4-data all 8.0.0-3 [62.5 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf libccp4c0t64 armhf 8.0.0-3 [75.8 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14.1.0-1 [263 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libmmdb2-0 armhf 2.0.22-1+b1 [280 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libccp4f0t64 armhf 8.0.0-3 [194 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf libccp4-dev armhf 8.0.0-3 [42.9 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf libmmdb2-dev armhf 2.0.22-1+b1 [92.9 kB] Fetched 19.4 MB in 2s (7983 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19464 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.1-4_armhf.deb ... Unpacking bsdextrautils (2.40.1-4) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../21-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../23-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../24-libxml2_2.12.7+dfsg-2_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg-2) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../29-libccp4-data_8.0.0-3_all.deb ... Unpacking libccp4-data (8.0.0-3) ... Selecting previously unselected package libccp4c0t64:armhf. Preparing to unpack .../30-libccp4c0t64_8.0.0-3_armhf.deb ... Unpacking libccp4c0t64:armhf (8.0.0-3) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../31-libgfortran5_14.1.0-1_armhf.deb ... Unpacking libgfortran5:armhf (14.1.0-1) ... Selecting previously unselected package libmmdb2-0:armhf. Preparing to unpack .../32-libmmdb2-0_2.0.22-1+b1_armhf.deb ... Unpacking libmmdb2-0:armhf (2.0.22-1+b1) ... Selecting previously unselected package libccp4f0t64:armhf. Preparing to unpack .../33-libccp4f0t64_8.0.0-3_armhf.deb ... Unpacking libccp4f0t64:armhf (8.0.0-3) ... Selecting previously unselected package libccp4-dev:armhf. Preparing to unpack .../34-libccp4-dev_8.0.0-3_armhf.deb ... Unpacking libccp4-dev:armhf (8.0.0-3) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../35-libmmdb2-dev_2.0.22-1+b1_armhf.deb ... Unpacking libmmdb2-dev (2.0.22-1+b1) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-4) ... Setting up libmmdb2-0:armhf (2.0.22-1+b1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libccp4-data (8.0.0-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libmmdb2-dev (2.0.22-1+b1) ... Setting up autopoint (0.21-14) ... Setting up libgfortran5:armhf (14.1.0-1) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libccp4c0t64:armhf (8.0.0-3) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libxml2:armhf (2.12.7+dfsg-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libccp4f0t64:armhf (8.0.0-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libccp4-dev:armhf (8.0.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes dpkg-buildpackage: info: source package ssm dpkg-buildpackage: info: source version 1.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_autoreconf_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" debian/rules binary dh binary --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_update_autotools_config "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead dh_autoreconf "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:40: warning: AC_OUTPUT should be used without arguments. configure.ac:40: You should run autoupdate. configure.ac:11: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_auto_configure -- --enable-superpose --enable-ccp4 --disable-static --enable-shared ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-superpose --enable-ccp4 --disable-static --enable-shared checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking for mmdb2/mmdb_manager.h... yes checking for ccp4_banner in -lccp4c... yes checking for ccp4/ccp4_general.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ssm.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_build "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j3 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make all-am make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o superpose-superpose.o `test -f 'superpose.cpp' || echo './'`superpose.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o superpose-sup_pairwise.o `test -f 'sup_pairwise.cpp' || echo './'`sup_pairwise.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o superpose-sup_multiple.o `test -f 'sup_multiple.cpp' || echo './'`sup_multiple.cpp superpose.cpp:117:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:117:27: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:298:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ superpose.cpp:298:37: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o ssm/ssm_csia.cpp: In member function 'void ssm::GraphMatch::FreeMemory()': ssm/ssm_csia.cpp:290:21: warning: 'void operator delete [](void*)' called on pointer '*' with nonzero offset 4 [-Wfree-nonheap-object] 290 | delete[] P[i]; | ^ /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/arm-linux-gnueabihf ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/13/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/13/crtbeginS.o ssm/.libs/ssm_superpose.o ssm/.libs/ssm_csia.o ssm/.libs/ssm_vxedge.o ssm/.libs/ssm_align.o ssm/.libs/ssm_malign.o ssm/.libs/ssm_graph.o -lmmdb2 -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/13/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/13/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libssm.so.2 -o .libs/libssm.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libssm.so.2" && ln -s "libssm.so.2.0.0" "libssm.so.2") libtool: link: (cd ".libs" && rm -f "libssm.so" && ln -s "libssm.so.2.0.0" "libssm.so") libtool: link: ( cd ".libs" && rm -f "libssm.la" && ln -s "../libssm.la" "libssm.la" ) /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_REENTRANT -Wl,-z -Wl,relro -o .libs/superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o ./.libs/libssm.so -lmmdb2 -lccp4c -lm make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_test "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j3 check "TESTSUITEFLAGS=-j3 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' create-stamp debian/debhelper-build-stamp dh_testroot "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_prep "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_auto_install "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j1 install DESTDIR=/build/reproducible-path/ssm-1.4.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libssm.so.2.0.0 /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf/libssm.so.2.0.0 libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libssm.so.2.0.0 libssm.so.2 || { rm -f libssm.so.2 && ln -s libssm.so.2.0.0 libssm.so.2; }; }) libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libssm.so.2.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.2.0.0 libssm.so; }; }) libtool: install: /usr/bin/install -c .libs/libssm.lai /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf/libssm.la libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' libtool: warning: 'libssm.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/superpose /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin/superpose /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 ssm.pc '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' /usr/bin/install -c -m 644 ssm/ssm_superpose.h ssm/ssm_csia.h ssm/ssm_vxedge.h ssm/ssm_align.h ssm/ssm_malign.h ssm/ssm_graph.h ssm/ssm_defs.h '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_install find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_installdocs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installchangelogs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installman "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installsystemduser "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_perl "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_link "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip_nondeterminism "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_compress "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_fixperms "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_missing "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_dwz -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_makeshlibs -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_shlibdeps -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installdeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_gencontrol "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_md5sums "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_builddeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_armhf.deb'. dpkg-deb: building package 'libssm2-dbgsym' in '../libssm2-dbgsym_1.4.0-2_armhf.deb'. dpkg-deb: building package 'libssm-bin-dbgsym' in '../libssm-bin-dbgsym_1.4.0-2_armhf.deb'. dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_armhf.deb'. dpkg-deb: building package 'libssm-bin' in '../libssm-bin_1.4.0-2_armhf.deb'. dpkg-genbuildinfo --build=binary -O../ssm_1.4.0-2_armhf.buildinfo dpkg-genchanges --build=binary -O../ssm_1.4.0-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2888 and its subdirectories I: Current time: Fri May 31 12:25:36 -12 2024 I: pbuilder-time-stamp: 1717201536