I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 4 23:28:02 +14 2024 I: pbuilder-time-stamp: 1725442082 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [seqmagick_0.8.6-3.dsc] I: copying [./seqmagick_0.8.6.orig.tar.gz] I: copying [./seqmagick_0.8.6-3.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Aug 6 20:16:33 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./seqmagick_0.8.6-3.dsc: no acceptable signature found dpkg-source: info: extracting seqmagick in seqmagick-0.8.6 dpkg-source: info: unpacking seqmagick_0.8.6.orig.tar.gz dpkg-source: info: unpacking seqmagick_0.8.6-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying biopython_1.71_dual_coding_support.patch dpkg-source: info: applying pytest.patch dpkg-source: info: applying replace-ungap.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/24567/tmp/hooks/D01_modify_environment starting debug: Running on virt32a. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Sep 4 09:28 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/24567/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/24567/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=18f05e3d0fe64ad6a02afe241182bfc8 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=24567 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Yds0FG9V/pbuilderrc_xugK --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Yds0FG9V/b2 --logfile b2/build.log seqmagick_0.8.6-3.dsc' SUDO_GID=113 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-25-armmp-lpae #1 SMP Debian 6.1.106-3 (2024-08-26) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/24567/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-pytest, python3-biopython, python3-pygtrie dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19490 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-pygtrie; however: Package python3-pygtrie is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-chardet{a} python3-freetype{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pil{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygtrie{a} python3-pytest{a} python3-reportlab{a} python3-rlpycairo{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra krb5-locales libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile python3-pygments shared-mime-info wget xdg-user-dirs 0 packages upgraded, 122 newly installed, 0 to remove and 0 not upgraded. Need to get 57.0 MB of archives. After unpacking 185 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libpython3.12-minimal armhf 3.12.5-4 [798 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.2-2 [82.4 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf python3.12-minimal armhf 3.12.5-4 [1812 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.12.5-1 [26.7 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.1-1 [22.1 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 12 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3 [71.1 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libnsl2 armhf 1.3.0-3+b2 [34.9 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libpython3.12-stdlib armhf 3.12.5-4 [1814 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf python3.12 armhf 3.12.5-4 [667 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.12.5-1 [9584 B] Get: 22 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.12.5-1 [27.6 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.2-7 [88.6 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf autopoint all 0.22.5-2 [723 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 45 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-2 [183 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-5 [9075 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg-3+b1 [583 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf debhelper all 13.20 [915 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf python3-more-itertools all 10.4.0-1 [63.7 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf python3-typeguard all 4.3.0-1 [36.5 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf python3-inflect all 7.3.1-1 [42.2 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 59 http://deb.debian.org/debian unstable/main armhf python3-jaraco.functools all 4.0.2-1 [11.7 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 73.0.1-1 [212 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf python3-zipp all 3.20.1-1 [10.2 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 73.0.1-1 [748 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf dh-python all 6.20240824 [109 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 66 http://deb.debian.org/debian unstable/main armhf libfontenc1 armhf 1:1.1.8-1 [20.6 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b4 [293 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf libpng16-16t64 armhf 1.6.43-5 [262 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf libfreetype6 armhf 2.13.2+dfsg-1+b4 [372 kB] Get: 70 http://deb.debian.org/debian unstable/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf xfonts-utils armhf 1:7.7+6 [84.5 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 74 http://deb.debian.org/debian unstable/main armhf fontconfig-config armhf 2.15.0-1.1 [317 kB] Get: 75 http://deb.debian.org/debian unstable/main armhf libblas3 armhf 3.12.0-3 [108 kB] Get: 76 http://deb.debian.org/debian unstable/main armhf libfontconfig1 armhf 2.15.0-1.1 [370 kB] Get: 77 http://deb.debian.org/debian unstable/main armhf libpixman-1-0 armhf 0.42.2-1+b1 [476 kB] Get: 78 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.9-1+b1 [17.4 kB] Get: 79 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.2-3+b1 [23.0 kB] Get: 80 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.17.0-2 [140 kB] Get: 81 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 82 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.7-1+b1 [739 kB] Get: 83 http://deb.debian.org/debian unstable/main armhf libxcb-render0 armhf 1.17.0-2 [114 kB] Get: 84 http://deb.debian.org/debian unstable/main armhf libxcb-shm0 armhf 1.17.0-2 [105 kB] Get: 85 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 86 http://deb.debian.org/debian unstable/main armhf libxrender1 armhf 1:0.9.10-1.1+b1 [24.9 kB] Get: 87 http://deb.debian.org/debian unstable/main armhf libcairo2 armhf 1.18.0-3+b1 [442 kB] Get: 88 http://deb.debian.org/debian unstable/main armhf libdeflate0 armhf 1.21-1 [36.3 kB] Get: 89 http://deb.debian.org/debian unstable/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 90 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14.2.0-4 [262 kB] Get: 91 http://deb.debian.org/debian unstable/main armhf libglib2.0-0t64 armhf 2.82.0-1 [1323 kB] Get: 92 http://deb.debian.org/debian unstable/main armhf libgraphite2-3 armhf 1.3.14-2 [63.2 kB] Get: 93 http://deb.debian.org/debian unstable/main armhf libharfbuzz0b armhf 9.0.0-1 [417 kB] Get: 94 http://deb.debian.org/debian unstable/main armhf libimagequant0 armhf 2.18.0-1+b1 [30.7 kB] Get: 95 http://deb.debian.org/debian unstable/main armhf libjbig0 armhf 2.1-6.1+b1 [27.3 kB] Get: 96 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3 [143 kB] Get: 97 http://deb.debian.org/debian unstable/main armhf liblapack3 armhf 3.12.0-3 [1803 kB] Get: 98 http://deb.debian.org/debian unstable/main armhf liblcms2-2 armhf 2.14-2+b1 [126 kB] Get: 99 http://deb.debian.org/debian unstable/main armhf liblerc4 armhf 4.0.0+ds-4+b1 [137 kB] Get: 100 http://deb.debian.org/debian unstable/main armhf libopenjp2-7 armhf 2.5.0-2+b3 [170 kB] Get: 101 http://deb.debian.org/debian unstable/main armhf libraqm0 armhf 0.10.1-1+b1 [11.8 kB] Get: 102 http://deb.debian.org/debian unstable/main armhf libsharpyuv0 armhf 1.4.0-0.1 [111 kB] Get: 103 http://deb.debian.org/debian unstable/main armhf libwebp7 armhf 1.4.0-0.1 [265 kB] Get: 104 http://deb.debian.org/debian unstable/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 105 http://deb.debian.org/debian unstable/main armhf libwebpdemux2 armhf 1.4.0-0.1 [110 kB] Get: 106 http://deb.debian.org/debian unstable/main armhf libwebpmux3 armhf 1.4.0-0.1 [120 kB] Get: 107 http://deb.debian.org/debian unstable/main armhf python3-all armhf 3.12.5-1 [1044 B] Get: 108 http://deb.debian.org/debian unstable/main armhf python3-numpy armhf 1:1.26.4+ds-11 [3340 kB] Get: 109 http://deb.debian.org/debian unstable/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 110 http://deb.debian.org/debian unstable/main armhf python3-pil armhf 10.4.0-1 [465 kB] Get: 111 http://deb.debian.org/debian unstable/main armhf python3-cairo armhf 1.26.1-1+b1 [108 kB] Get: 112 http://deb.debian.org/debian unstable/main armhf python3-freetype all 2.4.0-2 [78.6 kB] Get: 113 http://deb.debian.org/debian unstable/main armhf python3-rlpycairo all 0.3.0-3 [9904 B] Get: 114 http://deb.debian.org/debian unstable/main armhf python3-reportlab all 4.2.2-1 [1150 kB] Get: 115 http://deb.debian.org/debian unstable/main armhf xml-core all 0.19 [20.1 kB] Get: 116 http://deb.debian.org/debian unstable/main armhf w3c-sgml-lib all 1.3-3 [273 kB] Get: 117 http://deb.debian.org/debian unstable/main armhf python3-biopython armhf 1.83+dfsg1-3+b1 [1580 kB] Get: 118 http://deb.debian.org/debian unstable/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 119 http://deb.debian.org/debian unstable/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 120 http://deb.debian.org/debian unstable/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 121 http://deb.debian.org/debian unstable/main armhf python3-pygtrie all 2.2-2 [16.8 kB] Get: 122 http://deb.debian.org/debian unstable/main armhf python3-pytest all 8.3.2-1 [249 kB] Fetched 57.0 MB in 1s (50.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19490 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.5-4_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.5-4) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-2_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.5-4_armhf.deb ... Unpacking python3.12-minimal (3.12.5-4) ... Setting up libpython3.12-minimal:armhf (3.12.5-4) ... Setting up libexpat1:armhf (2.6.2-2) ... Setting up python3.12-minimal (3.12.5-4) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19810 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.5-1_armhf.deb ... Unpacking python3-minimal (3.12.5-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-3) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../05-libcom-err2_1.47.1-1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1-1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-3) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b2_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.5-4_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.5-4) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.5-4_armhf.deb ... Unpacking python3.12 (3.12.5-4) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../17-libpython3-stdlib_3.12.5-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.5-1) ... Setting up python3-minimal (3.12.5-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20882 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.5-1_armhf.deb ... Unpacking python3 (3.12.5-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../003-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../004-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../005-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../006-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. 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Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libgraphite2-3:armhf (1.3.14-2) ... Setting up liblcms2-2:armhf (2.14-2+b1) ... Setting up libpixman-1-0:armhf (0.42.2-1+b1) ... Setting up libsharpyuv0:armhf (1.4.0-0.1) ... Setting up libxau6:armhf (1:1.0.9-1+b1) ... Setting up libxdmcp6:armhf (1:1.1.2-3+b1) ... Setting up libkeyutils1:armhf (1.6.3-3) ... Setting up libxcb1:armhf (1.17.0-2) ... Setting up libicu72:armhf (72.1-5) ... Setting up liblerc4:armhf (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.40.2-7) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libxcb-render0:armhf (1.17.0-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b4) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:armhf (1.21-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libxcb-shm0:armhf (1.17.0-2) ... Setting up libcom-err2:armhf (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:armhf (2.1-6.1+b1) ... Setting up libelf1t64:armhf (0.191-2) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Sep 4 09:28:48 UTC 2024. Universal Time is now: Wed Sep 4 09:28:48 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:armhf (1:1.1.8-1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:armhf (2.82.0-1) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:armhf (1.0.15-1) ... Setting up libimagequant0:armhf (2.18.0-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:armhf (1.6.43-5) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libgfortran5:armhf (14.2.0-4) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:armhf (1.4.0-0.1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:armhf (4.5.1+git230720-5) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libopenjp2-7:armhf (2.5.0-2+b3) ... Setting up libx11-6:armhf (2:1.8.7-1+b1) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libwebpmux3:armhf (1.4.0-0.1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg-3+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libwebpdemux2:armhf (1.4.0-0.1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libfreetype6:armhf (2.13.2+dfsg-1+b4) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:armhf (9.0.0-1) ... Setting up libfontconfig1:armhf (2.15.0-1.1) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:armhf (1.18.0-3+b1) ... Setting up libraqm0:armhf (0.10.1-1+b1) ... Setting up libnsl2:armhf (1.3.0-3+b2) ... Setting up libpython3.12-stdlib:armhf (3.12.5-4) ... Setting up python3.12 (3.12.5-4) ... Setting up debhelper (13.20) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libpython3-stdlib:armhf (3.12.5-1) ... Setting up python3 (3.12.5-1) ... Setting up python3-zipp (3.20.1-1) ... Setting up python3-freetype (2.4.0-2) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-pil:armhf (10.4.0-1) ... Setting up python3-pygtrie (2.2-2) ... Setting up python3-packaging (24.1-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-more-itertools (10.4.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-cairo (1.26.1-1+b1) ... Setting up python3-jaraco.functools (4.0.2-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-pytest (8.3.2-1) ... Setting up python3-typeguard (4.3.0-1) ... Setting up python3-all (3.12.5-1) ... Setting up python3-inflect (7.3.1-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-pkg-resources (73.0.1-1) ... Setting up python3-setuptools (73.0.1-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-reportlab (4.2.2-1) ... Setting up dh-python (6.20240824) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.83+dfsg1-3+b1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/24567/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/24567/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/seqmagick-0.8.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../seqmagick_0.8.6-3_source.changes dpkg-buildpackage: info: source package seqmagick dpkg-buildpackage: info: source version 0.8.6-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data echo 0.8.6 > seqmagick/data/ver make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean /usr/lib/python3/dist-packages/setuptools/__init__.py:88: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:268: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running clean removing '/build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-armv7l' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data rm -rf seqmagick/data rm -rf seqmagick.egg-info make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules execute_before_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data echo 0.8.6 > seqmagick/data/ver make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config /usr/lib/python3/dist-packages/setuptools/__init__.py:88: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:268: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/__init__.py:88: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:268: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running build running build_py creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick copying seqmagick/transform.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick copying seqmagick/fileformat.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick copying seqmagick/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/test_subcommands_convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/test_subcommands_backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/test_transform.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/test_subcommands_quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/test_subcommands_common.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test copying seqmagick/test/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts copying seqmagick/scripts/cli.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts copying seqmagick/scripts/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/common.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/info.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands copying seqmagick/subcommands/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration copying seqmagick/test/integration/test_mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration copying seqmagick/test/integration/test_extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration copying seqmagick/test/integration/test_convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration copying seqmagick/test/integration/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration copying seqmagick/test/integration/test_info.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/data copying seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/data copying seqmagick/test/integration/data/input3.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input6.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output5.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.phy -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.gz -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input1.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.bz2 -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input4_ambig.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input5.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build; python3.12 -m pytest ============================= test session starts ============================== platform linux -- Python 3.12.5, pytest-8.3.2, pluggy-1.5.0 rootdir: /build/reproducible-path/seqmagick-0.8.6 plugins: typeguard-4.3.0 collected 154 items seqmagick/test/integration/test_convert.py .ss.............. [ 11%] seqmagick/test/integration/test_extract_ids.py ..ss.. [ 14%] seqmagick/test/integration/test_info.py ...s [ 17%] seqmagick/test/integration/test_mogrify.py .s. [ 19%] seqmagick/test/test_subcommands_backtrans_align.py ......... [ 25%] seqmagick/test/test_subcommands_common.py ..................s..... [ 40%] seqmagick/test/test_subcommands_convert.py ...... [ 44%] seqmagick/test/test_subcommands_quality_filter.py ...................... [ 59%] .... [ 61%] seqmagick/test/test_transform.py ....................................... [ 87%] .................... [100%] ======================= 147 passed, 7 skipped in 28.23s ======================== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/seqmagick/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick /usr/lib/python3/dist-packages/setuptools/__init__.py:88: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:268: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/data running install_lib creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12 creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/transform.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/test_subcommands_convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/test_subcommands_common.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/test_subcommands_backtrans_align.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/test_subcommands_quality_filter.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/test_subcommands_convert.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__pycache__/test_transform.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__pycache__ creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input3.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output3.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input6.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output5.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output3.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output2.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output2.phy -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output2.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output4.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input2.fasta.gz -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input1.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input2.fasta.bz2 -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input2.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input4_ambig.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/input5.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/data/output4.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__pycache__/test_convert.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__pycache__/test_info.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__pycache__/test_mogrify.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__pycache__/test_extract_ids.cpython-312-pytest-8.3.2.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/test_mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/test_extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/test_convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/integration/test_info.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/test_subcommands_backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/test_transform.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/test_subcommands_quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/test_subcommands_common.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/test/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/fileformat.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/data creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/__pycache__/fileformat.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/__pycache__/transform.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/__pycache__ creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts/cli.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/scripts/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/common.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/backtrans_align.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/extract_ids.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/common.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/info.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/mogrify.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/convert.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__pycache__/quality_filter.cpython-312.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/info.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/subcommands/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.12/build/seqmagick/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/transform.py to transform.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/test_subcommands_convert.py to test_subcommands_convert.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/test_mogrify.py to test_mogrify.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/test_extract_ids.py to test_extract_ids.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/test_convert.py to test_convert.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/integration/test_info.py to test_info.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/test_subcommands_backtrans_align.py to test_subcommands_backtrans_align.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/test_transform.py to test_transform.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/test_subcommands_quality_filter.py to test_subcommands_quality_filter.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/test_subcommands_common.py to test_subcommands_common.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/test/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/fileformat.py to fileformat.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/scripts/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/backtrans_align.py to backtrans_align.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/mogrify.py to mogrify.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/extract_ids.py to extract_ids.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/common.py to common.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/convert.py to convert.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/info.py to info.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/quality_filter.py to quality_filter.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/subcommands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick/__init__.py to __init__.cpython-312.pyc running install_egg_info running egg_info creating seqmagick.egg-info writing seqmagick.egg-info/PKG-INFO writing dependency_links to seqmagick.egg-info/dependency_links.txt writing entry points to seqmagick.egg-info/entry_points.txt writing requirements to seqmagick.egg-info/requires.txt writing top-level names to seqmagick.egg-info/top_level.txt writing manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.png' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'seqmagick.egg-info/SOURCES.txt' Copying seqmagick.egg-info to /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.12/dist-packages/seqmagick-0.8.6.egg-info Skipping SOURCES.txt running install_scripts Installing seqmagick script to /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'seqmagick' in '../seqmagick_0.8.6-3_all.deb'. dpkg-genbuildinfo --build=binary -O../seqmagick_0.8.6-3_armhf.buildinfo dpkg-genchanges --build=binary -O../seqmagick_0.8.6-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/24567/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/24567/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/24567 and its subdirectories I: Current time: Wed Sep 4 23:31:53 +14 2024 I: pbuilder-time-stamp: 1725442313