I: pbuilder: network access will be disabled during build I: Current time: Wed May 1 00:49:23 +14 2024 I: pbuilder-time-stamp: 1714474164 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-featureio-perl_1.6.905-2.dsc] I: copying [./libbio-featureio-perl_1.6.905.orig.tar.gz] I: copying [./libbio-featureio-perl_1.6.905-2.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jan 13 08:08:44 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-featureio-perl_1.6.905-2.dsc: no acceptable signature found dpkg-source: info: extracting libbio-featureio-perl in libbio-featureio-perl-1.6.905 dpkg-source: info: unpacking libbio-featureio-perl_1.6.905.orig.tar.gz dpkg-source: info: unpacking libbio-featureio-perl_1.6.905-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/29064/tmp/hooks/D01_modify_environment starting debug: Running on virt64c. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 30 10:49 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/29064/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/29064/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=e86421c06953455eb194c7266cb3dbfe LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=29064 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HTs8iIIQ/pbuilderrc_rTOM --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HTs8iIIQ/b2 --logfile b2/build.log libbio-featureio-perl_1.6.905-2.dsc' SUDO_GID=113 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 25 07:43 /bin -> usr/bin I: user script /srv/workspace/pbuilder/29064/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbio-perl-perl, libscalar-list-utils-perl, libtest-simple-perl, libtest-most-perl, libtree-dagnode-perl, liburi-perl, libxml-dom-perl, libxml-dom-xpath-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19440 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. pbuilder-satisfydepends-dummy depends on libtree-dagnode-perl; however: Package libtree-dagnode-perl is not installed. pbuilder-satisfydepends-dummy depends on liburi-perl; however: Package liburi-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-dom-perl; however: Package libxml-dom-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-dom-xpath-perl; however: Package libxml-dom-xpath-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-slurp-tiny-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libsub-override-perl{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libtree-dagnode-perl{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml-dom-perl{a} libxml-dom-xpath-perl{a} libxml-parser-perl{a} libxml-perl{a} libxml-regexp-perl{a} libxml-xpathengine-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-libxml-perl libxml-libxslt-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 25.3 MB of archives. After unpacking 87.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.2.1-3 [1326 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf ca-certificates all 20240203 [158 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-3+b1 [1091 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 26 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf libio-string-perl all 1.08-4 [12.1 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf libdata-stag-perl all 0.14-3 [448 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 40 http://deb.debian.org/debian unstable/main armhf libclone-perl armhf 0.46-1+b2 [13.1 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libencode-locale-perl all 1.05-3 [12.9 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libexception-class-perl all 1.45-1 [34.6 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf libhttp-date-perl all 6.06-1 [10.7 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libfile-listing-perl all 6.16-1 [12.4 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf libfile-slurp-tiny-perl all 0.004-2 [7592 B] Get: 49 http://deb.debian.org/debian unstable/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf liburi-perl all 5.28-1 [98.6 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf libhtml-parser-perl armhf 3.82-1 [95.6 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf libhtml-tree-perl all 5.07-3 [211 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf libio-html-perl all 1.004-3 [16.2 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf libhttp-message-perl all 6.45-1 [82.0 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf perl-openssl-defaults armhf 7+b2 [6708 B] Get: 59 http://deb.debian.org/debian unstable/main armhf libnet-ssleay-perl armhf 1.94-1+b1 [319 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf libio-socket-ssl-perl all 2.085-1 [218 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf libnet-http-perl all 6.23-1 [23.9 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf libwww-perl all 6.77-1 [183 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 66 http://deb.debian.org/debian unstable/main armhf libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf libtest-deep-perl all 1.204-1 [52.9 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf libtext-diff-perl all 1.45-2 [27.2 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf libtest-differences-perl all 0.71-1 [17.9 kB] Get: 70 http://deb.debian.org/debian unstable/main armhf libtest-exception-perl all 0.43-3 [16.9 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf libtest-warn-perl all 0.37-2 [14.5 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf libtest-most-perl all 0.38-1 [25.1 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf libtree-dagnode-perl all 1.32-1 [61.7 kB] Get: 74 http://deb.debian.org/debian unstable/main armhf libxml-parser-perl armhf 2.47-1+b2 [196 kB] Get: 75 http://deb.debian.org/debian unstable/main armhf libxml-perl all 0.08-4 [93.0 kB] Get: 76 http://deb.debian.org/debian unstable/main armhf libxml-regexp-perl all 0.04-1.1 [7500 B] Get: 77 http://deb.debian.org/debian unstable/main armhf libxml-dom-perl all 1.46-2 [152 kB] Get: 78 http://deb.debian.org/debian unstable/main armhf libxml-xpathengine-perl all 0.14-2 [33.5 kB] Get: 79 http://deb.debian.org/debian unstable/main armhf libxml-dom-xpath-perl all 0.14-4 [9352 B] Fetched 25.3 MB in 1s (26.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19440 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.2.1-3_armhf.deb ... Unpacking openssl (3.2.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../03-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../05-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../08-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.23.0-3+b1_armhf.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../11-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.21-14+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtool (2.4.7-7) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libhtml-parser-perl:armhf (3.82-1) ... 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Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/29064/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/29064/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libbio-featureio-perl-1.6.905/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-featureio-perl_1.6.905-2_source.changes dpkg-buildpackage: info: source package libbio-featureio-perl dpkg-buildpackage: info: source version 1.6.905-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-featureio-perl-1.6.905=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-featureio-perl-1.6.905=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::FeatureIO Writing MYMETA.yml and MYMETA.json dh_auto_build make -j4 make[1]: Entering directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' cp lib/Bio/FeatureIO/ptt.pm blib/lib/Bio/FeatureIO/ptt.pm cp lib/Bio/FeatureIO/interpro.pm blib/lib/Bio/FeatureIO/interpro.pm cp lib/Bio/FeatureIO/gtf.pm blib/lib/Bio/FeatureIO/gtf.pm cp lib/Bio/FeatureIO/vecscreen_simple.pm blib/lib/Bio/FeatureIO/vecscreen_simple.pm cp lib/Bio/FeatureIO.pm blib/lib/Bio/FeatureIO.pm cp lib/Bio/FeatureIO/gff.pm blib/lib/Bio/FeatureIO/gff.pm cp lib/Bio/FeatureIO/bed.pm blib/lib/Bio/FeatureIO/bed.pm cp lib/Bio/SeqFeature/Annotated.pm blib/lib/Bio/SeqFeature/Annotated.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' dh_auto_test make -j4 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/release-SeqFeature/*.t t/00-compile.t .................... 1..8 ok 1 - Bio/FeatureIO.pm loaded ok ok 2 - Bio/FeatureIO/bed.pm loaded ok ok 3 - Bio/FeatureIO/gff.pm loaded ok ok 4 - Bio/FeatureIO/gtf.pm loaded ok ok 5 - Bio/FeatureIO/interpro.pm loaded ok ok 6 - Bio/FeatureIO/ptt.pm loaded ok ok 7 - Bio/FeatureIO/vecscreen_simple.pm loaded ok ok 8 - Bio/SeqFeature/Annotated.pm loaded ok ok t/bed.t ........................... ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 1..7 ok t/FeatureIO.t ..................... ok 1 - use Bio::FeatureIO; ok 2 - use Bio::FeatureIO::gff; ok 3 - use Bio::FeatureIO::ptt; ok 4 - use Bio::FeatureIO::vecscreen_simple; ok 5 - use Bio::SeqFeature::Annotated; 1..5 ok t/gff.t ........................... ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 - An object of class 'Bio::SeqFeature::Annotated' isa 'Bio::SeqFeatureI' ok 8 - An object of class 'Bio::SeqFeature::Annotated' isa 'Bio::SeqFeature::Annotated' ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 ok 65 ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok 85 ok 86 ok 87 ok 88 ok 89 ok 90 ok 91 ok 92 ok 93 ok 94 ok 95 ok 96 ok 97 ok 98 ok 99 ok 100 ok 101 ok 102 ok 103 ok 104 ok 105 ok 106 ok 107 ok 108 ok 109 ok 110 ok 111 ok 112 ok 113 ok 114 ok 115 ok 116 ok 117 ok 118 ok 119 ok 120 ok 121 not ok 122 # TODO Add clustering groups based on grouping within the file # Failed (TODO) test at t/gff.t line 366. 1..122 ok t/ptt.t ........................... ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 - ptt file 1..11 ok t/release-mojibake.t .............. skipped: these tests are for release candidate testing t/release-pod-coverage.t .......... skipped: these tests are for release candidate testing t/release-pod-syntax.t ............ skipped: these tests are for release candidate testing t/release-SeqFeature/Annotated.t .. skipped: these tests are for release candidate testing t/vecscreen.t ..................... ok 1 ok 2 - vecscreen_simple gets the correct features 1..2 ok All tests successful. Files=10, Tests=155, 6 wallclock secs ( 0.12 usr 0.02 sys + 5.66 cusr 0.52 csys = 6.32 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-featureio-perl/ make -j4 install DESTDIR=/build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' Manifying 8 pod documents Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/SeqFeature/Annotated.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/interpro.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/gff.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/vecscreen_simple.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/gtf.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/ptt.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/perl5/Bio/FeatureIO/bed.pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::bed.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::gtf.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::ptt.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::interpro.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::vecscreen_simple.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::SeqFeature::Annotated.3pm Installing /build/reproducible-path/libbio-featureio-perl-1.6.905/debian/libbio-featureio-perl/usr/share/man/man3/Bio::FeatureIO::gff.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-featureio-perl-1.6.905' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-featureio-perl' in '../libbio-featureio-perl_1.6.905-2_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-featureio-perl_1.6.905-2_armhf.buildinfo dpkg-genchanges --build=binary -O../libbio-featureio-perl_1.6.905-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/29064/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/29064/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/29064 and its subdirectories I: Current time: Wed May 1 00:50:52 +14 2024 I: pbuilder-time-stamp: 1714474252