I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 30 10:06:12 +14 2025 I: pbuilder-time-stamp: 1738181172 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-eutilities-perl_1.77-3.dsc] I: copying [./libbio-eutilities-perl_1.77.orig.tar.gz] I: copying [./libbio-eutilities-perl_1.77-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libbio-eutilities-perl_1.77-3.dsc: unsupported subcommand dpkg-source: info: extracting libbio-eutilities-perl in libbio-eutilities-perl-1.77 dpkg-source: info: unpacking libbio-eutilities-perl_1.77.orig.tar.gz dpkg-source: info: unpacking libbio-eutilities-perl_1.77-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying inline-DTDs-on-testsuite dpkg-source: info: applying autopkgtest-compile.patch dpkg-source: info: applying typo.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/25752/tmp/hooks/D01_modify_environment starting debug: Running on virt64b. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 29 20:07 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/25752/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/25752/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=ed61e686666b46f8929b3fc65e251799 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=25752 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cqAWfqF5/pbuilderrc_7TGX --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cqAWfqF5/b2 --logfile b2/build.log libbio-eutilities-perl_1.77-3.dsc' SUDO_GID=113 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-30-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/25752/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org> Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbio-asn1-entrezgene-perl, libbio-perl-perl, libhttp-message-perl, libtext-csv-perl, liburi-perl, libwww-perl, libxml-libxml-perl, libxml-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19568 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-asn1-entrezgene-perl; however: Package libbio-asn1-entrezgene-perl is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libtext-csv-perl; however: Package libtext-csv-perl is not installed. pbuilder-satisfydepends-dummy depends on liburi-perl; however: Package liburi-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-libxml-perl; however: Package libxml-libxml-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-simple-perl; however: Package libxml-simple-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbio-asn1-entrezgene-perl{a} libbio-cluster-perl{a} libbio-perl-perl{a} libbio-variation-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libelf1t64{a} libencode-locale-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libproc2-0{a} libtext-charwidth-perl{a} libtext-csv-perl{a} libtext-wrapi18n-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-parser-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml-simple-perl{a} libxml-twig-perl{a} libxml-writer-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} procps{a} sensible-utils{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libtext-csv-xs-perl libtext-iconv-perl libtie-ixhash-perl libxml-dom-xpath-perl libxml-libxslt-perl libxml-perl libxml-sax-expat-perl libxml-sax-writer-perl libxml-xpath-perl libxml-xpathengine-perl linux-sysctl-defaults lynx perl-tk psmisc wget 0 packages upgraded, 76 newly installed, 0 to remove and 0 not upgraded. Need to get 28.1 MB of archives. After unpacking 98.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-7 [56.3 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-7 [866 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.4.0-2 [1388 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf ca-certificates all 20241223 [164 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.1-1 [238 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.4-2 [84.6 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libtext-charwidth-perl armhf 0.04-11+b4 [9128 B] Get: 17 http://deb.debian.org/debian unstable/main armhf libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 18 http://deb.debian.org/debian unstable/main armhf ucf all 3.0049 [42.5 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf automake all 1:1.17-2 [861 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.1-1 [770 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.24.1 [90.9 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libtool all 2.5.4-2 [539 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get: 30 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.1-1 [1560 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf debhelper all 13.24.1 [920 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf libio-string-perl all 1.08-4 [12.1 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libdata-stag-perl all 0.14-3 [448 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf liburi-perl all 5.30-1 [105 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libencode-locale-perl all 1.05-3 [12.9 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf libhttp-date-perl all 6.06-1 [10.7 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libfile-listing-perl all 6.16-1 [12.4 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf libhtml-parser-perl armhf 3.83-1+b2 [96.5 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf libhtml-tree-perl all 5.07-3 [211 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf libclone-perl armhf 0.47-1+b1 [13.3 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf libio-html-perl all 1.004-3 [16.2 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf libhttp-message-perl all 7.00-2 [79.8 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf perl-openssl-defaults armhf 7+b2 [6708 B] Get: 58 http://deb.debian.org/debian unstable/main armhf libnet-ssleay-perl armhf 1.94-2 [319 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf libnet-http-perl all 6.23-1 [23.9 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf libwww-perl all 6.77-1 [183 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf libxml-parser-perl armhf 2.47-1+b3 [196 kB] Get: 66 http://deb.debian.org/debian unstable/main armhf libxml-twig-perl all 1:3.52-3 [177 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf libxml-writer-perl all 0.900-2 [26.8 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf libbio-variation-perl all 1.7.5-3 [72.6 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 70 http://deb.debian.org/debian unstable/main armhf libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf libbio-asn1-entrezgene-perl all 1.730-3 [46.3 kB] Get: 74 http://deb.debian.org/debian unstable/main armhf libtext-csv-perl all 2.05-1 [115 kB] Get: 75 http://deb.debian.org/debian unstable/main armhf libxml-libxml-perl armhf 2.0207+dfsg+really+2.0134-5+b1 [298 kB] Get: 76 http://deb.debian.org/debian unstable/main armhf libxml-simple-perl all 2.25-2 [69.8 kB] Fetched 28.1 MB in 2s (13.0 MB/s) Preconfiguring packages ... Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19568 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../01-libproc2-0_2%3a4.0.4-7_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../02-procps_2%3a4.0.4-7_armhf.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../03-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../04-openssl_3.4.0-2_armhf.deb ... Unpacking openssl (3.4.0-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../05-ca-certificates_20241223_all.deb ... Unpacking ca-certificates (20241223) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../07-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.23.1-1_armhf.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../10-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../11-groff-base_1.23.0-7_armhf.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../12-bsdextrautils_2.40.4-2_armhf.deb ... Unpacking bsdextrautils (2.40.4-2) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../13-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../14-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libtext-charwidth-perl:armhf. Preparing to unpack .../15-libtext-charwidth-perl_0.04-11+b4_armhf.deb ... Unpacking libtext-charwidth-perl:armhf (0.04-11+b4) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../16-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... Selecting previously unselected package ucf. Preparing to unpack .../17-ucf_3.0049_all.deb ... Moving old data out of the way Unpacking ucf (3.0049) ... Selecting previously unselected package m4. Preparing to unpack .../18-m4_1.4.19-5_armhf.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../19-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../20-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... 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Selecting previously unselected package libtext-csv-perl. Preparing to unpack .../73-libtext-csv-perl_2.05-1_all.deb ... Unpacking libtext-csv-perl (2.05-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../74-libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b1_armhf.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../75-libxml-simple-perl_2.25-2_all.deb ... Unpacking libxml-simple-perl (2.25-2) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libtext-charwidth-perl:armhf (0.04-11+b4) ... Setting up libicu72:armhf (72.1-6) ... Setting up bsdextrautils (2.40.4-2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:armhf (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:armhf (7+b2) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3+b1) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libxml-writer-perl (0.900-2) ... Setting up libproc2-0:armhf (2:4.0.4-7) ... Setting up libunistring5:armhf (1.3-1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b2) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up procps (2:4.0.4-7) ... Setting up netbase (6.4) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.4.0-2) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libtext-csv-perl (2.05-1) ... Setting up libnet-ssleay-perl:armhf (1.94-2) ... Setting up automake (1:1.17-2) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.23.1-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtool (2.5.4-2) ... Setting up libnet-http-perl (6.23-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up ucf (3.0049) ... Setting up dh-strip-nondeterminism (1.14.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-7) ... Setting up libhtml-parser-perl:armhf (3.83-1+b2) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.24.1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up libbio-asn1-entrezgene-perl (1.730-3) ... Processing triggers for libc-bin (2.40-6) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/25752/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/25752/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libbio-eutilities-perl-1.77/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-eutilities-perl_1.77-3_source.changes dpkg-buildpackage: info: source package libbio-eutilities-perl dpkg-buildpackage: info: source version 1.77-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier <emollier@debian.org> dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-eutilities-perl-1.77=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-eutilities-perl-1.77=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::EUtilities Writing MYMETA.yml and MYMETA.json dh_auto_build make -j4 make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' cp lib/Bio/Tools/EUtilities/History.pm blib/lib/Bio/Tools/EUtilities/History.pm cp lib/Bio/Tools/EUtilities/Summary/DocSum.pm blib/lib/Bio/Tools/EUtilities/Summary/DocSum.pm cp lib/Bio/Tools/EUtilities/Summary/Item.pm blib/lib/Bio/Tools/EUtilities/Summary/Item.pm cp lib/Bio/Tools/EUtilities/Info.pm blib/lib/Bio/Tools/EUtilities/Info.pm cp lib/Bio/Tools/EUtilities/Query.pm blib/lib/Bio/Tools/EUtilities/Query.pm cp lib/Bio/Tools/EUtilities/EUtilDataI.pm blib/lib/Bio/Tools/EUtilities/EUtilDataI.pm cp lib/Bio/Tools/EUtilities/Link/LinkSet.pm blib/lib/Bio/Tools/EUtilities/Link/LinkSet.pm cp lib/Bio/Tools/EUtilities/Link/UrlLink.pm blib/lib/Bio/Tools/EUtilities/Link/UrlLink.pm cp lib/Bio/Tools/EUtilities/EUtilParameters.pm blib/lib/Bio/Tools/EUtilities/EUtilParameters.pm cp lib/Bio/Tools/EUtilities/Summary/ItemContainerI.pm blib/lib/Bio/Tools/EUtilities/Summary/ItemContainerI.pm cp lib/Bio/Tools/EUtilities.pm blib/lib/Bio/Tools/EUtilities.pm cp lib/Bio/Tools/EUtilities/Query/GlobalQuery.pm blib/lib/Bio/Tools/EUtilities/Query/GlobalQuery.pm cp lib/Bio/DB/EUtilities.pm blib/lib/Bio/DB/EUtilities.pm cp lib/Bio/Tools/EUtilities/Info/FieldInfo.pm blib/lib/Bio/Tools/EUtilities/Info/FieldInfo.pm cp lib/Bio/Tools/EUtilities/Summary.pm blib/lib/Bio/Tools/EUtilities/Summary.pm cp lib/Bio/Tools/EUtilities/Info/LinkInfo.pm blib/lib/Bio/Tools/EUtilities/Info/LinkInfo.pm cp lib/Bio/Tools/EUtilities/HistoryI.pm blib/lib/Bio/Tools/EUtilities/HistoryI.pm cp lib/Bio/Tools/EUtilities/Link.pm blib/lib/Bio/Tools/EUtilities/Link.pm cp lib/Bio/EUtilities.pm blib/lib/Bio/EUtilities.pm cp bin/bp_einfo blib/script/bp_einfo "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_einfo cp bin/bp_genbank_ref_extractor blib/script/bp_genbank_ref_extractor "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_genbank_ref_extractor Manifying 2 pod documents Manifying 19 pod documents make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' dh_auto_test make -j4 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t .............. 1..21 ok 1 - Bio/DB/EUtilities.pm loaded ok ok 2 - Bio/EUtilities.pm loaded ok ok 3 - Bio/Tools/EUtilities.pm loaded ok ok 4 - Bio/Tools/EUtilities/EUtilDataI.pm loaded ok ok 5 - Bio/Tools/EUtilities/EUtilParameters.pm loaded ok ok 6 - Bio/Tools/EUtilities/History.pm loaded ok ok 7 - Bio/Tools/EUtilities/HistoryI.pm loaded ok ok 8 - Bio/Tools/EUtilities/Info.pm loaded ok ok 9 - Bio/Tools/EUtilities/Info/FieldInfo.pm loaded ok ok 10 - Bio/Tools/EUtilities/Info/LinkInfo.pm loaded ok ok 11 - Bio/Tools/EUtilities/Link.pm loaded ok ok 12 - Bio/Tools/EUtilities/Link/LinkSet.pm loaded ok ok 13 - Bio/Tools/EUtilities/Link/UrlLink.pm loaded ok ok 14 - Bio/Tools/EUtilities/Query.pm loaded ok ok 15 - Bio/Tools/EUtilities/Query/GlobalQuery.pm loaded ok ok 16 - Bio/Tools/EUtilities/Summary.pm loaded ok ok 17 - Bio/Tools/EUtilities/Summary/DocSum.pm loaded ok ok 18 - Bio/Tools/EUtilities/Summary/Item.pm loaded ok ok 19 - Bio/Tools/EUtilities/Summary/ItemContainerI.pm loaded ok ok 20 - bin/bp_einfo compiled ok ok 21 - bin/bp_genbank_ref_extractor compiled ok ok t/author-eol.t .............. skipped: these tests are for testing by the author t/author-mojibake.t ......... skipped: these tests are for testing by the author t/author-no-tabs.t .......... skipped: these tests are for testing by the author t/author-pod-syntax.t ....... skipped: these tests are for testing by the author t/egquery.t ................. 1..18 ok 1 - get_db ok 2 - get_database ok 3 - get_databases ok 4 - get_term ok 5 - get_count ok 6 - get_count ok 7 - get_count ok 8 - get_GlobalQueries ok 9 - get_term ok 10 - get_term ok 11 - get_term ok 12 - get_term ok 13 - get_term ok 14 - get_term ok 15 - get_term ok 16 - get_term ok 17 - get_term ok 18 - get_term ok t/einfo.t ................... 1..49 ok 1 - get_available_databases ok 2 - get_databases ok 3 - get_db ok 4 - get_record_count ok 5 - get_menu_name ok 6 - get_last_update ok 7 - get_description ok 8 - FieldInfo ok 9 - LinkInfo ok 10 - get_db ok 11 - get_dbs ok 12 - get_record_count ok 13 - get_menu_name ok 14 - get_last_update ok 15 - get_description ok 16 - FieldInfo ok 17 - get_term_count ok 18 - get_field_name ok 19 - get_field_code ok 20 - get_field_description ok 21 - is_date ok 22 - is_singletoken ok 23 - is_hierarchy ok 24 - is_hidden ok 25 - is_numerical ok 26 - get_term_count ok 27 - get_field_name ok 28 - get_field_code ok 29 - get_field_description ok 30 - is_date ok 31 - is_singletoken ok 32 - is_hierarchy ok 33 - is_hidden ok 34 - is_numerical ok 35 - LinkInfo ok 36 - get_dbto ok 37 - get_dbfrom ok 38 - get_link_name ok 39 - get_link_description ok 40 - get_priority ok 41 - get_html_tag ok 42 - get_url ok 43 - get_dbto ok 44 - get_dbfrom ok 45 - get_link_name ok 46 - get_link_description ok 47 - get_priority ok 48 - get_html_tag ok 49 - get_url ok t/elink_acheck.t ............ 1..128 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - get_ids ok 5 - uncorrelated LinkSets lump everything together ok 6 ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 8 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 ok 65 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 66 ok 67 - get_ids ok 68 - get_ids ok 69 - correlated LinkSets separate ID data ok 70 ok 71 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 72 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok 85 ok 86 ok 87 ok 88 ok 89 ok 90 ok 91 ok 92 ok 93 ok 94 ok 95 ok 96 ok 97 ok 98 ok 99 ok 100 ok 101 ok 102 ok 103 ok 104 ok 105 ok 106 ok 107 ok 108 ok 109 ok 110 ok 111 ok 112 ok 113 ok 114 ok 115 ok 116 ok 117 ok 118 ok 119 ok 120 ok 121 ok 122 ok 123 ok 124 ok 125 ok 126 ok 127 ok 128 ok t/elink_lcheck.t ............ 1..62 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 33 ok 34 - get_ids ok 35 - correlated LinkSets separate ID data ok 36 ok 37 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok t/elink_llinks.t ............ 1..84 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 44 ok 45 - get_ids ok 46 - correlated LinkSets separate ID data ok 47 ok 48 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 49 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 ok 65 ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok t/elink_ncheck.t ............ 1..58 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 29 ok 30 - get_ids ok 31 - correlated LinkSets separate ID data ok 32 ok 33 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 34 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok t/elink_neighbor.t .......... 1..61 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 33 ok 34 - get_ids ok 35 - correlated LinkSets separate ID data ok 36 ok 37 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok t/elink_neighbor_history.t .. 1..63 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::HistoryI' ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 34 ok 35 - get_ids ok 36 - correlated LinkSets separate ID data ok 37 ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 39 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 40 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::HistoryI' ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok t/elink_scores.t ............ 1..56 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok t/epost.t ................... 1..15 ok 1 - An object of class 'Bio::Tools::EUtilities::Query' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 2 - An object of class 'Bio::Tools::EUtilities::Query' isa 'Bio::Tools::EUtilities::Query' ok 3 - eutil ok 4 - datatype ok 5 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::HistoryI' ok 6 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - eutil ok 8 - eutil ok 9 - get_webenv ok 10 - get_query_key ok 11 - history ok 12 - get_database ok 13 - get_ids ok 14 - get_database ok 15 - get_ids ok t/esearch.t ................. 1..31 ok 1 - get_count ok 2 ok 3 - get_ids ok 4 - get_retstart ok 5 - get_retmax ok 6 - get_translation_from ok 7 - get_translation_to ok 8 - get_db ok 9 - get_database ok 10 - get_term ok 11 - get_db ok 12 - get_database ok 13 - get_term ok 14 - get_corrected_query ok 15 - get_replaced_terms ok 16 - get_count ok 17 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::HistoryI' ok 18 - get_webenv ok 19 - get_query_key ok 20 - history ok 21 - get_ids ok 22 - get_retstart ok 23 - get_retmax ok 24 - get_translation_from ok 25 - get_translation_to ok 26 - get_db ok 27 - get_database ok 28 - get_term ok 29 - get_corrected_query ok 30 - get_replaced_terms ok 31 - get_GlobalQueries ok t/espell.t .................. 1..20 ok 1 - get_db ok 2 - get_dbs ok 3 - get_database ok 4 - get_databases ok 5 - get_term ok 6 - get_corrected_query ok 7 - get_replaced_terms ok 8 - get_replaced_terms ok 9 - get_count ok 10 ok 11 - get_ids ok 12 - get_retstart ok 13 - get_retmax ok 14 - get_translation_from ok 15 - get_translation_to ok 16 - get_db ok 17 - get_dbs ok 18 - get_database ok 19 - get_databases ok 20 - get_term ok t/esummary.t ................ 1..81 ok 1 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 2 ok 3 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 4 ok 5 - get_ids ok 6 ok 7 - An object of class 'Bio::Tools::EUtilities::Summary::DocSum' isa 'Bio::Tools::EUtilities::Summary::DocSum' ok 8 ok 9 ok 10 ok 11 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 51 ok 52 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 53 ok 54 - get_ids ok 55 ok 56 - An object of class 'Bio::Tools::EUtilities::Summary::DocSum' isa 'Bio::Tools::EUtilities::Summary::DocSum' ok 57 ok 58 ok 59 ok 60 ok 61 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 62 ok 63 ok 64 ok 65 ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok t/EUtilParameters.t ......... 1..12 ok 1 ok 2 - An object of class 'HTTP::Request' isa 'HTTP::Request' ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 - available_parameters ok 10 - available_parameters ok 11 - get_parameters ok 12 - get_parameters ok t/release-EUtilities.t ...... skipped: these tests are for release candidate testing All tests successful. Files=20, Tests=759, 53 wallclock secs ( 0.28 usr 0.06 sys + 11.36 cusr 1.08 csys = 12.78 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-eutilities-perl/ make -j4 install DESTDIR=/build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' Manifying 2 pod documents Manifying 19 pod documents Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/DB/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/EUtilDataI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/HistoryI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/EUtilParameters.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/History.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Query.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link/LinkSet.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link/UrlLink.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info/FieldInfo.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info/LinkInfo.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Query/GlobalQuery.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/DocSum.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/ItemContainerI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/Item.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man1/bp_einfo.1p Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man1/bp_genbank_ref_extractor.1p Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::DocSum.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::EUtilDataI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::History.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link::LinkSet.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::DB::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::ItemContainerI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::EUtilParameters.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info::LinkInfo.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::Item.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Query::GlobalQuery.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link::UrlLink.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::HistoryI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Query.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info::FieldInfo.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/bin/bp_einfo Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/bin/bp_genbank_ref_extractor make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-eutilities-perl' in '../libbio-eutilities-perl_1.77-3_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-eutilities-perl_1.77-3_armhf.buildinfo dpkg-genchanges --build=binary -O../libbio-eutilities-perl_1.77-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/25752/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/25752/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/25752 and its subdirectories I: Current time: Thu Jan 30 10:12:49 +14 2025 I: pbuilder-time-stamp: 1738181569