I: pbuilder: network access will be disabled during build I: Current time: Tue Apr 9 01:41:21 +14 2024 I: pbuilder-time-stamp: 1712576481 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [golang-github-biogo-biogo_1.0.4-1.dsc] I: copying [./golang-github-biogo-biogo_1.0.4.orig.tar.gz] I: copying [./golang-github-biogo-biogo_1.0.4-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Oct 29 21:25:39 2021 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./golang-github-biogo-biogo_1.0.4-1.dsc: no acceptable signature found dpkg-source: info: extracting golang-github-biogo-biogo in golang-github-biogo-biogo-1.0.4 dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.4.orig.tar.gz dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.4-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6618/tmp/hooks/D01_modify_environment starting debug: Running on virt32b. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 8 11:41 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/6618/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/6618/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=8ca6d54ff3014cc8b8be6555dce047e4 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=6618 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7HNSl8Eu/pbuilderrc_2ltD --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7HNSl8Eu/b2 --logfile b2/build.log golang-github-biogo-biogo_1.0.4-1.dsc' SUDO_GID=112 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-18-armmp-lpae #1 SMP Debian 6.1.76-1 (2024-02-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 7 07:43 /bin -> usr/bin I: user script /srv/workspace/pbuilder/6618/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-github-biogo-graph-dev, golang-github-biogo-store-dev, golang-gopkg-check.v1-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19466 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-hts-dev; however: Package golang-github-biogo-hts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-graph-dev; however: Package golang-github-biogo-graph-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-store-dev; however: Package golang-github-biogo-store-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-gopkg-check.v1-dev; however: Package golang-gopkg-check.v1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.22-go{a} golang-1.22-src{a} golang-any{a} golang-github-biogo-graph-dev{a} golang-github-biogo-hts-dev{a} golang-github-biogo-store-dev{a} golang-github-creack-pty-dev{a} golang-github-kr-pretty-dev{a} golang-github-kr-text-dev{a} golang-github-rogpeppe-go-internal-dev{a} golang-github-ulikunitz-xz-dev{a} golang-github-yuin-goldmark-dev{a} golang-go{a} golang-golang-x-crypto-dev{a} golang-golang-x-mod-dev{a} golang-golang-x-net-dev{a} golang-golang-x-sync-dev{a} golang-golang-x-sys-dev{a} golang-golang-x-term-dev{a} golang-golang-x-text-dev{a} golang-golang-x-tools-dev{a} golang-gopkg-check.v1-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx pkg-config pkgconf wget 0 packages upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 68.4 MB of archives. After unpacking 369 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-3+b1 [1091 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.39.3-11 [82.5 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf dh-golang all 1.62 [24.7 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf golang-1.22-src all 1.22.2-1 [18.8 MB] Get: 33 http://deb.debian.org/debian unstable/main armhf golang-1.22-go armhf 1.22.2-1 [21.5 MB] Get: 34 http://deb.debian.org/debian unstable/main armhf golang-src all 2:1.22~3 [5020 B] Get: 35 http://deb.debian.org/debian unstable/main armhf golang-go armhf 2:1.22~3 [44.2 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf golang-any armhf 2:1.22~3 [5104 B] Get: 37 http://deb.debian.org/debian unstable/main armhf golang-github-creack-pty-dev all 1.1.21-1 [13.0 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf golang-github-kr-text-dev all 0.2.0-2 [10.2 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf golang-golang-x-mod-dev all 0.16.0-1 [103 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf golang-golang-x-sys-dev all 0.18.0-1 [402 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf golang-github-yuin-goldmark-dev all 1.7.0-1 [113 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf golang-golang-x-term-dev all 0.18.0-1 [14.7 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf golang-golang-x-text-dev all 0.14.0-2 [4001 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf golang-golang-x-crypto-dev all 1:0.21.0-1 [1671 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf golang-golang-x-net-dev all 1:0.23.0+dfsg-1 [896 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf golang-golang-x-sync-dev all 0.6.0-1 [18.5 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf golang-golang-x-tools-dev all 1:0.19.0+ds-1 [1566 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf golang-github-rogpeppe-go-internal-dev all 1.12.0-3 [103 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf golang-github-kr-pretty-dev all 0.3.1-1 [11.9 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-1 [32.1 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf golang-github-biogo-graph-dev all 0.0~git20150317.057c198-3 [12.3 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf golang-github-biogo-store-dev all 0.0~git20200525.8c94ae1-2 [34.3 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf golang-github-biogo-hts-dev all 1.4.4+dfsg1-1 [319 kB] Fetched 68.4 MB in 2s (29.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19466 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3+b1_armhf.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.39.3-11_armhf.deb ... Unpacking bsdextrautils (2.39.3-11) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../22-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package dh-golang. Preparing to unpack .../30-dh-golang_1.62_all.deb ... Unpacking dh-golang (1.62) ... Selecting previously unselected package golang-1.22-src. Preparing to unpack .../31-golang-1.22-src_1.22.2-1_all.deb ... Unpacking golang-1.22-src (1.22.2-1) ... Selecting previously unselected package golang-1.22-go. Preparing to unpack .../32-golang-1.22-go_1.22.2-1_armhf.deb ... Unpacking golang-1.22-go (1.22.2-1) ... Selecting previously unselected package golang-src. Preparing to unpack .../33-golang-src_2%3a1.22~3_all.deb ... Unpacking golang-src (2:1.22~3) ... Selecting previously unselected package golang-go:armhf. Preparing to unpack .../34-golang-go_2%3a1.22~3_armhf.deb ... Unpacking golang-go:armhf (2:1.22~3) ... Selecting previously unselected package golang-any:armhf. Preparing to unpack .../35-golang-any_2%3a1.22~3_armhf.deb ... Unpacking golang-any:armhf (2:1.22~3) ... Selecting previously unselected package golang-github-creack-pty-dev. Preparing to unpack .../36-golang-github-creack-pty-dev_1.1.21-1_all.deb ... Unpacking golang-github-creack-pty-dev (1.1.21-1) ... Selecting previously unselected package golang-github-kr-text-dev. Preparing to unpack .../37-golang-github-kr-text-dev_0.2.0-2_all.deb ... Unpacking golang-github-kr-text-dev (0.2.0-2) ... Selecting previously unselected package golang-golang-x-mod-dev. Preparing to unpack .../38-golang-golang-x-mod-dev_0.16.0-1_all.deb ... Unpacking golang-golang-x-mod-dev (0.16.0-1) ... 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Setting up golang-golang-x-sync-dev (0.6.0-1) ... Setting up golang-golang-x-mod-dev (0.16.0-1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up golang-golang-x-text-dev (0.14.0-2) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up golang-golang-x-crypto-dev (1:0.21.0-1) ... Setting up golang-src (2:1.22~3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Setting up golang-github-ulikunitz-xz-dev (0.5.6-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up golang-1.22-go (1.22.2-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up golang-github-biogo-hts-dev (1.4.4+dfsg1-1) ... Setting up golang-golang-x-net-dev (1:0.23.0+dfsg-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up golang-go:armhf (2:1.22~3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up golang-golang-x-tools-dev (1:0.19.0+ds-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up golang-any:armhf (2:1.22~3) ... Setting up golang-github-rogpeppe-go-internal-dev (1.12.0-3) ... Setting up golang-github-kr-pretty-dev (0.3.1-1) ... Setting up debhelper (13.15.3) ... Setting up golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-1) ... Setting up golang-github-biogo-graph-dev (0.0~git20150317.057c198-3) ... Setting up dh-golang (1.62) ... Setting up golang-github-biogo-store-dev (0.0~git20200525.8c94ae1-2) ... Processing triggers for libc-bin (2.37-15.1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/6618/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/6618/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.4-1_source.changes dpkg-buildpackage: info: source package golang-github-biogo-biogo dpkg-buildpackage: info: source version 1.0.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 4 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util internal/goarch github.com/biogo/biogo internal/unsafeheader internal/cpu internal/coverage/rtcov internal/godebugs internal/abi internal/chacha8rand internal/goexperiment internal/goos runtime/internal/math internal/bytealg runtime/internal/atomic runtime/internal/sys runtime/internal/syscall internal/itoa math/bits unicode/utf8 internal/race sync/atomic math unicode cmp slices encoding github.com/biogo/store/llrb runtime log/internal image/color sync internal/reflectlite internal/testlog internal/bisect internal/godebug math/rand errors sort internal/oserror io strconv syscall internal/safefilepath path strings text/tabwriter hash container/heap bytes github.com/biogo/biogo/feat reflect internal/saferio github.com/biogo/biogo/io/featio github.com/biogo/store/interval bufio hash/adler32 github.com/biogo/biogo/feat/gene time internal/syscall/unix internal/syscall/execenv internal/fmtsort encoding/binary io/fs internal/poll os fmt io/ioutil github.com/biogo/biogo/util encoding/csv encoding/gob github.com/biogo/biogo/alphabet github.com/biogo/biogo/seq github.com/biogo/biogo/align/matrix github.com/biogo/graph github.com/biogo/biogo/align github.com/biogo/biogo/seq/linear github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/fasta log github.com/biogo/biogo/morass github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/align/pals/filter compress/flate github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/feat/genome github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/align/pals github.com/biogo/biogo/feat/genome/human/hg19 compress/zlib github.com/biogo/biogo/complexity github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/seq/sequtils github.com/biogo/hts/fai github.com/biogo/biogo/seq/multi github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/pwm github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/quality github.com/biogo/biogo/io/seqio/alignio dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 4 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util ? github.com/biogo/biogo [no test files] ? github.com/biogo/biogo/align/matrix [no test files] === RUN Test OK: 2 passed --- PASS: Test (0.01s) === RUN ExampleFitted_Align --- PASS: ExampleFitted_Align (0.00s) === RUN ExampleFittedAffine_Align --- PASS: ExampleFittedAffine_Align (0.00s) === RUN ExampleNW_Align --- PASS: ExampleNW_Align (0.00s) === RUN ExampleNWAffine_Align --- PASS: ExampleNWAffine_Align (0.00s) === RUN ExampleSW_Align_a --- PASS: ExampleSW_Align_a (0.00s) === RUN ExampleSW_Align_b --- PASS: ExampleSW_Align_b (0.00s) === RUN ExampleSWAffine_Align --- PASS: ExampleSWAffine_Align (0.00s) PASS ok github.com/biogo/biogo/align 0.053s === RUN Test OK: 5 passed --- PASS: Test (0.03s) PASS ok github.com/biogo/biogo/align/pals 0.058s === RUN Test OK: 1 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/align/pals/dp 0.030s === RUN Test OK: 1 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/align/pals/filter 0.019s === RUN Test OK: 10 passed --- PASS: Test (0.02s) === RUN Example_allValid --- PASS: Example_allValid (0.00s) === RUN Example_complement --- PASS: Example_complement (0.00s) PASS ok github.com/biogo/biogo/alphabet 0.033s === RUN Test OK: 4 passed --- PASS: Test (2.16s) PASS ok github.com/biogo/biogo/complexity 2.179s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleMap --- PASS: ExampleMap (0.00s) === RUN ExamplePromiseMap --- PASS: ExamplePromiseMap (1.02s) === RUN ExampleLazily --- PASS: ExampleLazily (0.00s) PASS ok github.com/biogo/biogo/concurrent 1.038s === RUN Test OK: 3 passed, 1 skipped --- PASS: Test (0.03s) PASS ok github.com/biogo/biogo/errors 0.057s ? github.com/biogo/biogo/feat/genome [no test files] ? github.com/biogo/biogo/feat/genome/cow/bt7 [no test files] === RUN Test OK: 6 passed --- PASS: Test (0.02s) PASS ok github.com/biogo/biogo/feat 0.059s === RUN Test OK: 4 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/feat/gene 0.036s ? github.com/biogo/biogo/feat/genome/drosophila/dm3 [no test files] ? github.com/biogo/biogo/feat/genome/mouse/mm10 [no test files] ? github.com/biogo/biogo/feat/genome/human/hg19 [no test files] ? github.com/biogo/biogo/io/seqio/fai [no test files] ? github.com/biogo/biogo/pwm [no test files] === RUN Test OK: 5 passed --- PASS: Test (11.68s) PASS ok github.com/biogo/biogo/index/kmerindex 12.038s === RUN Test OK: 2 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/io/featio 0.037s === RUN Test OK: 4 passed --- PASS: Test (0.05s) PASS ok github.com/biogo/biogo/io/featio/bed 0.078s === RUN Test OK: 5 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/featio/gff 0.016s === RUN TestSeqio --- PASS: TestSeqio (0.00s) === RUN Test OK: 3 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/seqio 0.028s === RUN Test OK: 2 passed --- PASS: Test (0.03s) PASS ok github.com/biogo/biogo/io/seqio/alignio 0.080s === RUN Test OK: 2 passed --- PASS: Test (0.01s) === RUN ExampleReader --- PASS: ExampleReader (0.00s) PASS ok github.com/biogo/biogo/io/seqio/fasta 0.022s === RUN Test OK: 2 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/seqio/fastq 0.015s === RUN Test OK: 7 passed --- PASS: Test (13.95s) PASS ok github.com/biogo/biogo/morass 13.976s === RUN TestSeq --- PASS: TestSeq (0.00s) PASS ok github.com/biogo/biogo/seq 0.020s === RUN Test OK: 1 passed --- PASS: Test (0.01s) === RUN ExampleNewSeq --- PASS: ExampleNewSeq (0.00s) === RUN ExampleSeq_Add --- PASS: ExampleSeq_Add (0.00s) === RUN ExampleSeq_Clone --- PASS: ExampleSeq_Clone (0.00s) === RUN ExampleSeq_Rows --- PASS: ExampleSeq_Rows (0.00s) === RUN ExampleSeq_join --- PASS: ExampleSeq_join (0.00s) === RUN ExampleSeq_Len --- PASS: ExampleSeq_Len (0.00s) === RUN ExampleSeq_RevComp --- PASS: ExampleSeq_RevComp (0.00s) === RUN ExampleSeq_stitch --- PASS: ExampleSeq_stitch (0.00s) === RUN ExampleSeq_truncate --- PASS: ExampleSeq_truncate (0.00s) === RUN ExampleNewQSeq --- PASS: ExampleNewQSeq (0.00s) === RUN ExampleQSeq_Add --- PASS: ExampleQSeq_Add (0.00s) === RUN ExampleQSeq_Clone --- PASS: ExampleQSeq_Clone (0.00s) === RUN ExampleQSeq_Rows --- PASS: ExampleQSeq_Rows (0.00s) === RUN ExampleQSeq_join --- PASS: ExampleQSeq_join (0.00s) === RUN ExampleQSeq_Len --- PASS: ExampleQSeq_Len (0.00s) === RUN ExampleQSeq_RevComp --- PASS: ExampleQSeq_RevComp (0.00s) === RUN ExampleQSeq_stitch --- PASS: ExampleQSeq_stitch (0.00s) === RUN ExampleQSeq_truncate --- PASS: ExampleQSeq_truncate (0.00s) PASS ok github.com/biogo/biogo/seq/alignment 0.045s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleNewQSeq --- PASS: ExampleNewQSeq (0.00s) === RUN ExampleQSeq_Validate --- PASS: ExampleQSeq_Validate (0.00s) === RUN ExampleQSeq_AppendQLetters --- PASS: ExampleQSeq_AppendQLetters (0.00s) === RUN ExampleNewSeq --- PASS: ExampleNewSeq (0.00s) === RUN ExampleSeq_Validate --- PASS: ExampleSeq_Validate (0.00s) === RUN ExampleSeq_truncate_a --- PASS: ExampleSeq_truncate_a (0.00s) === RUN ExampleSeq_truncate_b --- PASS: ExampleSeq_truncate_b (0.00s) === RUN ExampleSeq_RevComp --- PASS: ExampleSeq_RevComp (0.00s) === RUN ExampleSeq_join --- PASS: ExampleSeq_join (0.00s) === RUN ExampleSeq_stitch --- PASS: ExampleSeq_stitch (0.00s) === RUN ExampleSeq_compose --- PASS: ExampleSeq_compose (0.00s) PASS ok github.com/biogo/biogo/seq/linear 0.014s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleNewMulti --- PASS: ExampleNewMulti (0.00s) === RUN ExampleMulti_Add --- PASS: ExampleMulti_Add (0.00s) === RUN ExampleMulti_Clone --- PASS: ExampleMulti_Clone (0.00s) === RUN ExampleMulti_Rows --- PASS: ExampleMulti_Rows (0.00s) === RUN ExampleMulti_IsFlush --- PASS: ExampleMulti_IsFlush (0.00s) === RUN ExampleMulti_Join --- PASS: ExampleMulti_Join (0.00s) === RUN ExampleMulti_Len --- PASS: ExampleMulti_Len (0.00s) === RUN ExampleMulti_RevComp --- PASS: ExampleMulti_RevComp (0.00s) === RUN ExampleMulti_Stitch --- PASS: ExampleMulti_Stitch (0.00s) === RUN ExampleMulti_Truncate --- PASS: ExampleMulti_Truncate (0.00s) === RUN ExampleSet_AppendEach --- PASS: ExampleSet_AppendEach (0.00s) === RUN ExampleSet_Rows --- PASS: ExampleSet_Rows (0.00s) === RUN ExampleSet_Row --- PASS: ExampleSet_Row (0.00s) === RUN ExampleSet_Len --- PASS: ExampleSet_Len (0.00s) PASS ok github.com/biogo/biogo/seq/multi 0.574s === RUN Test OK: 1 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/seq/quality 0.016s === RUN Test OK: 4 passed --- PASS: Test (0.00s) === RUN ExampleTruncate_a --- PASS: ExampleTruncate_a (0.00s) === RUN ExampleTruncate_b --- PASS: ExampleTruncate_b (0.00s) === RUN ExampleJoin --- PASS: ExampleJoin (0.00s) === RUN ExampleStitch --- PASS: ExampleStitch (0.00s) PASS ok github.com/biogo/biogo/seq/sequtils 0.024s === RUN Test OK: 11 passed --- PASS: Test (0.04s) PASS ok github.com/biogo/biogo/util 0.064s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang dh_auto_install --destdir=debian/golang-github-biogo-biogo-dev/ -O--builddirectory=_build -O--buildsystem=golang dh_installdocs -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -O--builddirectory=_build -O--buildsystem=golang dh_perl -O--builddirectory=_build -O--buildsystem=golang dh_link -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -O--builddirectory=_build -O--buildsystem=golang dh_compress -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -O--builddirectory=_build -O--buildsystem=golang dh_missing -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -O--builddirectory=_build -O--buildsystem=golang dh_golang -O--builddirectory=_build -O--buildsystem=golang dh_gencontrol -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-biogo-biogo-dev' in '../golang-github-biogo-biogo-dev_1.0.4-1_all.deb'. dpkg-genbuildinfo --build=binary -O../golang-github-biogo-biogo_1.0.4-1_armhf.buildinfo dpkg-genchanges --build=binary -O../golang-github-biogo-biogo_1.0.4-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/6618/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/6618/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6618 and its subdirectories I: Current time: Tue Apr 9 01:45:05 +14 2024 I: pbuilder-time-stamp: 1712576705