I: pbuilder: network access will be disabled during build I: Current time: Sat Mar 30 08:53:14 +14 2024 I: pbuilder-time-stamp: 1711738394 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gerris_20131206+dfsg-19.1.dsc] I: copying [./gerris_20131206+dfsg.orig.tar.gz] I: copying [./gerris_20131206+dfsg-19.1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 17:03:58 2024 gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D gpgv: issuer "vorlon@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./gerris_20131206+dfsg-19.1.dsc: no acceptable signature found dpkg-source: info: extracting gerris in gerris-20131206+dfsg dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz dpkg-source: info: unpacking gerris_20131206+dfsg-19.1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_automake_doc_examples dpkg-source: info: applying 02_fix_makefiles.patch dpkg-source: info: applying 03_build_funct.patch dpkg-source: info: applying 05_reproducible_build.patch dpkg-source: info: applying 05_Port-to-Python-3.patch dpkg-source: info: applying 06_Port-to-MPI-3.0.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/5924/tmp/hooks/D01_modify_environment starting debug: Running on virt64z. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Mar 29 18:53 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/5924/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/5924/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=db95fc360d8f436e9b04e70247b68203 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=5924 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CNzcYyXn/pbuilderrc_d2dy --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CNzcYyXn/b2 --logfile b2/build.log gerris_20131206+dfsg-19.1.dsc' SUDO_GID=110 SUDO_UID=103 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-18-arm64 #1 SMP Debian 6.1.76-1 (2024-02-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 25 16:02 /bin -> usr/bin I: user script /srv/workspace/pbuilder/5924/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19467 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl0-dev; however: Package libgsl0-dev is not installed. pbuilder-satisfydepends-dummy depends on libgts-bin (>= 0.7.6+darcs121130-1.2); however: Package libgts-bin is not installed. pbuilder-satisfydepends-dummy depends on libgts-dev (>= 0.7.6+darcs121130-1.2); however: Package libgts-dev is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} hdf5-helpers{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblkid-dev{a} libbrotli1{a} libbsd0{a} libcbor0.10{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libfabric1{a} libffi-dev{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgsl-dev{a} libgsl27{a} libgslcblas0{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgts-bin{a} libgts-dev{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmount-dev{a} libmunge2{a} libnetcdf-dev{a} libnetcdf19t64{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libselinux1-dev{a} libsepol-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} m4{a} man-db{a} media-types{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3-packaging{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libmail-sendmail-perl lynx publicsuffix shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 156 newly installed, 0 to remove and 0 not upgraded. Need to get 76.2 MB of archives. After unpacking 273 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libpython3.11-minimal armhf 3.11.8-3+b3 [804 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf python3.11-minimal armhf 3.11.8-3+b3 [1600 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf tzdata all 2024a-1 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf libpython3.11-stdlib armhf 3.11.8-3+b3 [1703 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf python3.11 armhf 3.11.8-3+b3 [597 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-3+b1 [1091 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.39.3-11 [82.5 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-1+b2 [33.4 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.0-3+b2 [1367 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libedit2 armhf 3.1-20230828-1 [76.8 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libcbor0.10 armhf 0.10.2-1.2 [24.3 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf libfido2-1 armhf 1.14.0-1+b1 [70.5 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.20.1-6+b1 [30.6 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.0-2.4 [19.5 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.20.1-6+b1 [75.5 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 32 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.20.1-6+b1 [290 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.20.1-6+b1 [112 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf openssh-client armhf 1:9.7p1-2+b1 [870 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 47 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1 [183 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b1 [106 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf dh-exec armhf 0.29 [24.3 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14-20240315-1 [264 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf libgfortran-13-dev armhf 13.2.0-23 [306 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-23 [8198 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf gfortran-13 armhf 13.2.0-23 [11.2 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf gfortran-arm-linux-gnueabihf armhf 4:13.2.0-7 [1288 B] Get: 61 http://deb.debian.org/debian unstable/main armhf gfortran armhf 4:13.2.0-7 [1432 B] Get: 62 http://deb.debian.org/debian unstable/main armhf hdf5-helpers armhf 1.10.10+repack-3.2 [23.4 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf libnl-3-200 armhf 3.7.0-0.3 [51.7 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf libnl-route-3-200 armhf 3.7.0-0.3 [153 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf libibverbs1 armhf 50.0-2+b1 [55.0 kB] Get: 66 http://deb.debian.org/debian unstable/main armhf ibverbs-providers armhf 50.0-2+b1 [28.7 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf icu-devtools armhf 72.1-4+b1 [185 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf libaec0 armhf 1.1.3-1 [21.5 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf libsz2 armhf 1.1.3-1 [7724 B] Get: 70 http://deb.debian.org/debian unstable/main armhf libaec-dev armhf 1.1.3-1 [18.8 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf uuid-dev armhf 2.39.3-11 [40.4 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf libblkid-dev armhf 2.39.3-11 [186 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 74 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.59.0-1+b1 [62.7 kB] Get: 75 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1 [55.6 kB] Get: 76 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b3 [53.2 kB] Get: 77 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.0-4.1+b1 [198 kB] Get: 78 http://deb.debian.org/debian unstable/main armhf libcurl3t64-gnutls armhf 8.7.1-1 [383 kB] Get: 79 http://deb.debian.org/debian unstable/main armhf libcurl4-gnutls-dev armhf 8.7.1-1 [497 kB] Get: 80 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.7.1-1 [390 kB] Get: 81 http://deb.debian.org/debian unstable/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-8.1+b2 [164 kB] Get: 82 http://deb.debian.org/debian unstable/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-8.1+b2 [122 kB] Get: 83 http://deb.debian.org/debian unstable/main armhf libevent-extra-2.1-7t64 armhf 2.1.12-stable-8.1+b2 [99.2 kB] Get: 84 http://deb.debian.org/debian unstable/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-8.1+b2 [53.8 kB] Get: 85 http://deb.debian.org/debian unstable/main armhf libevent-openssl-2.1-7t64 armhf 2.1.12-stable-8.1+b2 [58.7 kB] Get: 86 http://deb.debian.org/debian unstable/main armhf libevent-dev armhf 2.1.12-stable-8.1+b2 [292 kB] Get: 87 http://deb.debian.org/debian unstable/main armhf librdmacm1t64 armhf 50.0-2+b1 [62.1 kB] Get: 88 http://deb.debian.org/debian unstable/main armhf libfabric1 armhf 1.17.0-3+b1 [386 kB] Get: 89 http://deb.debian.org/debian unstable/main armhf libffi-dev armhf 3.4.6-1 [55.9 kB] Get: 90 http://deb.debian.org/debian unstable/main armhf libglib2.0-0t64 armhf 2.78.4-6 [1053 kB] Get: 91 http://deb.debian.org/debian unstable/main armhf libglib2.0-data all 2.78.4-6 [1224 kB] Get: 92 http://deb.debian.org/debian unstable/main armhf libglib2.0-bin armhf 2.78.4-6 [110 kB] Get: 93 http://deb.debian.org/debian unstable/main armhf python3-packaging all 23.2-1 [44.8 kB] Get: 94 http://deb.debian.org/debian unstable/main armhf libglib2.0-dev-bin armhf 2.78.4-6 [155 kB] Get: 95 http://deb.debian.org/debian unstable/main armhf libsepol-dev armhf 3.5-2 [319 kB] Get: 96 http://deb.debian.org/debian unstable/main armhf libpcre2-16-0 armhf 10.42-4+b1 [212 kB] Get: 97 http://deb.debian.org/debian unstable/main armhf libpcre2-32-0 armhf 10.42-4+b1 [203 kB] Get: 98 http://deb.debian.org/debian unstable/main armhf libpcre2-posix3 armhf 10.42-4+b1 [55.3 kB] Get: 99 http://deb.debian.org/debian unstable/main armhf libpcre2-dev armhf 10.42-4+b1 [668 kB] Get: 100 http://deb.debian.org/debian unstable/main armhf libselinux1-dev armhf 3.5-2+b1 [152 kB] Get: 101 http://deb.debian.org/debian unstable/main armhf libmount-dev armhf 2.39.3-11 [24.0 kB] Get: 102 http://deb.debian.org/debian unstable/main armhf libpkgconf3 armhf 1.8.1-1+b2 [31.9 kB] Get: 103 http://deb.debian.org/debian unstable/main armhf pkgconf-bin armhf 1.8.1-1+b2 [28.9 kB] Get: 104 http://deb.debian.org/debian unstable/main armhf pkgconf armhf 1.8.1-1+b2 [26.2 kB] Get: 105 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB] Get: 106 http://deb.debian.org/debian unstable/main armhf libglib2.0-dev armhf 2.78.4-6 [1528 kB] Get: 107 http://deb.debian.org/debian unstable/main armhf libgslcblas0 armhf 2.7.1+dfsg-6+b1 [79.6 kB] Get: 108 http://deb.debian.org/debian unstable/main armhf libgsl27 armhf 2.7.1+dfsg-6+b1 [767 kB] Get: 109 http://deb.debian.org/debian unstable/main armhf libgsl-dev armhf 2.7.1+dfsg-6+b1 [975 kB] Get: 110 http://deb.debian.org/debian unstable/main armhf libgts-0.7-5t64 armhf 0.7.6+darcs121130-5.2 [132 kB] Get: 111 http://deb.debian.org/debian unstable/main armhf libgts-bin armhf 0.7.6+darcs121130-5.2 [44.9 kB] Get: 112 http://deb.debian.org/debian unstable/main armhf libgts-dev armhf 0.7.6+darcs121130-5.2 [162 kB] Get: 113 http://deb.debian.org/debian unstable/main armhf libhdf5-103-1t64 armhf 1.10.10+repack-3.2 [1192 kB] Get: 114 http://deb.debian.org/debian unstable/main armhf libhdf5-cpp-103-1t64 armhf 1.10.10+repack-3.2 [121 kB] Get: 115 http://deb.debian.org/debian unstable/main armhf libhdf5-fortran-102t64 armhf 1.10.10+repack-3.2 [78.8 kB] Get: 116 http://deb.debian.org/debian unstable/main armhf libhdf5-hl-100t64 armhf 1.10.10+repack-3.2 [61.2 kB] Get: 117 http://deb.debian.org/debian unstable/main armhf libhdf5-hl-fortran-100t64 armhf 1.10.10+repack-3.2 [34.8 kB] Get: 118 http://deb.debian.org/debian unstable/main armhf libhdf5-hl-cpp-100t64 armhf 1.10.10+repack-3.2 [20.9 kB] Get: 119 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-2+b2 [143 kB] Get: 120 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-2+b2 [260 kB] Get: 121 http://deb.debian.org/debian unstable/main armhf libjpeg-dev armhf 1:2.1.5-2+b2 [72.1 kB] Get: 122 http://deb.debian.org/debian unstable/main armhf libssl-dev armhf 3.1.5-1.1 [2154 kB] Get: 123 http://deb.debian.org/debian unstable/main armhf libhdf5-dev armhf 1.10.10+repack-3.2 [2613 kB] Get: 124 http://deb.debian.org/debian unstable/main armhf libhwloc15 armhf 2.10.0-1+b1 [133 kB] Get: 125 http://deb.debian.org/debian unstable/main armhf libnuma1 armhf 2.0.18-1 [18.5 kB] Get: 126 http://deb.debian.org/debian unstable/main armhf libnuma-dev armhf 2.0.18-1 [34.2 kB] Get: 127 http://deb.debian.org/debian unstable/main armhf libltdl7 armhf 2.4.7-7 [390 kB] Get: 128 http://deb.debian.org/debian unstable/main armhf libltdl-dev armhf 2.4.7-7 [162 kB] Get: 129 http://deb.debian.org/debian unstable/main armhf libhwloc-dev armhf 2.10.0-1+b1 [223 kB] Get: 130 http://deb.debian.org/debian unstable/main armhf libpciaccess0 armhf 0.17-3 [49.0 kB] Get: 131 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 132 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 133 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.15-1 [140 kB] Get: 134 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 135 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.7-1 [735 kB] Get: 136 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 137 http://deb.debian.org/debian unstable/main armhf libxnvctrl0 armhf 535.171.04-1 [12.8 kB] Get: 138 http://deb.debian.org/debian unstable/main armhf ocl-icd-libopencl1 armhf 2.3.2-1 [36.8 kB] Get: 139 http://deb.debian.org/debian unstable/main armhf libhwloc-plugins armhf 2.10.0-1+b1 [16.1 kB] Get: 140 http://deb.debian.org/debian unstable/main armhf libnl-3-dev armhf 3.7.0-0.3 [94.3 kB] Get: 141 http://deb.debian.org/debian unstable/main armhf libnl-route-3-dev armhf 3.7.0-0.3 [180 kB] Get: 142 http://deb.debian.org/debian unstable/main armhf libibverbs-dev armhf 50.0-2+b1 [198 kB] Get: 143 http://deb.debian.org/debian unstable/main armhf libicu-dev armhf 72.1-4+b1 [10.1 MB] Get: 144 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 145 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 146 http://deb.debian.org/debian unstable/main armhf libmunge2 armhf 0.5.15-4 [16.4 kB] Get: 147 http://deb.debian.org/debian unstable/main armhf libnetcdf19t64 armhf 1:4.9.2-5+b1 [419 kB] Get: 148 http://deb.debian.org/debian unstable/main armhf libxml2-dev armhf 2.9.14+dfsg-1.3+b2 [717 kB] Get: 149 http://deb.debian.org/debian unstable/main armhf libnetcdf-dev armhf 1:4.9.2-5+b1 [104 kB] Get: 150 http://deb.debian.org/debian unstable/main armhf libpmix2t64 armhf 5.0.1-4.1 [545 kB] Get: 151 http://deb.debian.org/debian unstable/main armhf libopenmpi3t64 armhf 4.1.6-7+b1 [1857 kB] Get: 152 http://deb.debian.org/debian unstable/main armhf openmpi-common all 4.1.6-7 [168 kB] Get: 153 http://deb.debian.org/debian unstable/main armhf libpmix-dev armhf 5.0.1-4.1 [3844 kB] Get: 154 http://deb.debian.org/debian unstable/main armhf openmpi-bin armhf 4.1.6-7+b1 [195 kB] Get: 155 http://deb.debian.org/debian unstable/main armhf libopenmpi-dev armhf 4.1.6-7+b1 [923 kB] Get: 156 http://deb.debian.org/debian unstable/main armhf mpi-default-dev armhf 1.15 [3152 B] Fetched 76.2 MB in 2s (46.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19467 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-3+b3_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.8-3+b3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-3+b3_armhf.deb ... Unpacking python3.11-minimal (3.11.8-3+b3) ... Setting up libpython3.11-minimal:armhf (3.11.8-3+b3) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.11-minimal (3.11.8-3+b3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19785 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_armhf.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-1_all.deb ... Unpacking tzdata (2024a-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.8-3+b3_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.8-3+b3) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.8-3+b3_armhf.deb ... Unpacking python3.11 (3.11.8-3+b3) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20779 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_armhf.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../003-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../006-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-3+b1_armhf.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.39.3-11_armhf.deb ... Unpacking bsdextrautils (2.39.3-11) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../009-libpipeline1_1.5.7-1+b2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1+b2) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.12.0-3+b2_armhf.deb ... Unpacking man-db (2.12.0-3+b2) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../011-libbsd0_0.12.2-1_armhf.deb ... Unpacking libbsd0:armhf (0.12.2-1) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../012-libedit2_3.1-20230828-1_armhf.deb ... Unpacking libedit2:armhf (3.1-20230828-1) ... Selecting previously unselected package libcbor0.10:armhf. Preparing to unpack .../013-libcbor0.10_0.10.2-1.2_armhf.deb ... Unpacking libcbor0.10:armhf (0.10.2-1.2) ... Selecting previously unselected package libfido2-1:armhf. Preparing to unpack .../014-libfido2-1_1.14.0-1+b1_armhf.deb ... Unpacking libfido2-1:armhf (1.14.0-1+b1) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../015-libkrb5support0_1.20.1-6+b1_armhf.deb ... Unpacking libkrb5support0:armhf (1.20.1-6+b1) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../016-libcom-err2_1.47.0-2.4_armhf.deb ... Unpacking libcom-err2:armhf (1.47.0-2.4) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../017-libk5crypto3_1.20.1-6+b1_armhf.deb ... Unpacking libk5crypto3:armhf (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../018-libkeyutils1_1.6.3-3_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-3) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../019-libkrb5-3_1.20.1-6+b1_armhf.deb ... Unpacking libkrb5-3:armhf (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../020-libgssapi-krb5-2_1.20.1-6+b1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.20.1-6+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../021-openssh-client_1%3a9.7p1-2+b1_armhf.deb ... Unpacking openssh-client (1:9.7p1-2+b1) ... Selecting previously unselected package m4. Preparing to unpack .../022-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../023-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../024-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../025-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../026-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../027-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../028-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../029-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../030-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../031-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../032-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../033-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../034-libelf1t64_0.191-1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1) ... Selecting previously unselected package dwz. Preparing to unpack .../035-dwz_0.15-1+b1_armhf.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../036-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../037-libxml2_2.9.14+dfsg-1.3+b2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../038-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../039-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../040-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../041-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package dh-exec. Preparing to unpack .../042-dh-exec_0.29_armhf.deb ... Unpacking dh-exec (0.29) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../043-libgfortran5_14-20240315-1_armhf.deb ... Unpacking libgfortran5:armhf (14-20240315-1) ... Selecting previously unselected package libgfortran-13-dev:armhf. Preparing to unpack .../044-libgfortran-13-dev_13.2.0-23_armhf.deb ... Unpacking libgfortran-13-dev:armhf (13.2.0-23) ... Selecting previously unselected package gfortran-13-arm-linux-gnueabihf. Preparing to unpack .../045-gfortran-13-arm-linux-gnueabihf_13.2.0-23_armhf.deb ... Unpacking gfortran-13-arm-linux-gnueabihf (13.2.0-23) ... Selecting previously unselected package gfortran-13. Preparing to unpack .../046-gfortran-13_13.2.0-23_armhf.deb ... Unpacking gfortran-13 (13.2.0-23) ... Selecting previously unselected package gfortran-arm-linux-gnueabihf. Preparing to unpack .../047-gfortran-arm-linux-gnueabihf_4%3a13.2.0-7_armhf.deb ... Unpacking gfortran-arm-linux-gnueabihf (4:13.2.0-7) ... Selecting previously unselected package gfortran. Preparing to unpack .../048-gfortran_4%3a13.2.0-7_armhf.deb ... Unpacking gfortran (4:13.2.0-7) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../049-hdf5-helpers_1.10.10+repack-3.2_armhf.deb ... Unpacking hdf5-helpers (1.10.10+repack-3.2) ... Selecting previously unselected package libnl-3-200:armhf. Preparing to unpack .../050-libnl-3-200_3.7.0-0.3_armhf.deb ... Unpacking libnl-3-200:armhf (3.7.0-0.3) ... Selecting previously unselected package libnl-route-3-200:armhf. Preparing to unpack .../051-libnl-route-3-200_3.7.0-0.3_armhf.deb ... Unpacking libnl-route-3-200:armhf (3.7.0-0.3) ... Selecting previously unselected package libibverbs1:armhf. Preparing to unpack .../052-libibverbs1_50.0-2+b1_armhf.deb ... Unpacking libibverbs1:armhf (50.0-2+b1) ... Selecting previously unselected package ibverbs-providers:armhf. Preparing to unpack .../053-ibverbs-providers_50.0-2+b1_armhf.deb ... Unpacking ibverbs-providers:armhf (50.0-2+b1) ... Selecting previously unselected package icu-devtools. 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Selecting previously unselected package libopenmpi-dev:armhf. Preparing to unpack .../142-libopenmpi-dev_4.1.6-7+b1_armhf.deb ... Unpacking libopenmpi-dev:armhf (4.1.6-7+b1) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../143-mpi-default-dev_1.15_armhf.deb ... Unpacking mpi-default-dev (1.15) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.7-1+b2) ... Setting up libpciaccess0:armhf (0.17-3) ... Setting up libxau6:armhf (1:1.0.9-1) ... Setting up libkeyutils1:armhf (1.6.3-3) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-11) ... Setting up hdf5-helpers (1.10.10+repack-3.2) ... Setting up libgslcblas0:armhf (2.7.1+dfsg-6+b1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libcbor0.10:armhf (0.10.2-1.2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:armhf (1.1.0-2+b3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up libpsl5t64:armhf (0.21.2-1.1) ... Setting up libnghttp2-14:armhf (1.59.0-1+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up libgsl27:armhf (2.7.1+dfsg-6+b1) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:armhf (2.1.12-stable-8.1+b2) ... Setting up libcom-err2:armhf (1.47.0-2.4) ... Setting up file (1:5.45-3) ... Setting up libffi-dev:armhf (3.4.6-1) ... Setting up libpcre2-16-0:armhf (10.42-4+b1) ... Setting up libaec0:armhf (1.1.3-1) ... Setting up libelf1t64:armhf (0.191-1) ... Setting up libkrb5support0:armhf (1.20.1-6+b1) ... Setting up tzdata (2024a-1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Mar 29 18:54:47 UTC 2024. Universal Time is now: Fri Mar 29 18:54:47 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:armhf (10.42-4+b1) ... Setting up libglib2.0-0t64:armhf (2.78.4-6) ... No schema files found: doing nothing. Setting up libglib2.0-data (2.78.4-6) ... Setting up libpkgconf3:armhf (1.8.1-1+b2) ... Setting up libmunge2:armhf (0.5.15-4) ... Setting up libjpeg62-turbo:armhf (1:2.1.5-2+b2) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:armhf (1:2.1.5-2+b2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b3) ... Setting up uuid-dev:armhf (2.39.3-11) ... Setting up libssl-dev:armhf (3.1.5-1.1) ... Setting up libhwloc15:armhf (2.10.0-1+b1) ... Setting up autopoint (0.21-14) ... Setting up icu-devtools (72.1-4+b1) ... Setting up libsepol-dev:armhf (3.5-2) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up libk5crypto3:armhf (1.20.1-6+b1) ... Setting up libltdl7:armhf (2.4.7-7) ... Setting up libgfortran5:armhf (14-20240315-1) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg-3.1) ... Setting up libnuma1:armhf (2.0.18-1) ... Setting up libpcre2-posix3:armhf (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:armhf (2.3.2-1) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libnl-3-200:armhf (3.7.0-0.3) ... Setting up openmpi-common (4.1.6-7) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libgts-0.7-5t64:armhf (0.7.6+darcs121130-5.2) ... Setting up libkrb5-3:armhf (1.20.1-6+b1) ... Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-8.1+b2) ... Setting up libssh2-1t64:armhf (1.11.0-4.1+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:armhf (1.14.0-1+b1) ... Setting up libgfortran-13-dev:armhf (13.2.0-23) ... Setting up libbsd0:armhf (0.12.2-1) ... Setting up readline-common (8.2-4) ... Setting up libicu-dev:armhf (72.1-4+b1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Setting up libsz2:armhf (1.1.3-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gfortran-13-arm-linux-gnueabihf (13.2.0-23) ... Setting up libblkid-dev:armhf (2.39.3-11) ... Setting up libgts-bin (0.7.6+darcs121130-5.2) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libgsl-dev (2.7.1+dfsg-6+b1) ... Setting up libpcre2-dev:armhf (10.42-4+b1) ... Setting up libtool (2.4.7-7) ... Setting up libselinux1-dev:armhf (3.5-2+b1) ... Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-8.1+b2) ... Setting up libedit2:armhf (3.1-20230828-1) ... Setting up libevent-openssl-2.1-7t64:armhf (2.1.12-stable-8.1+b2) ... Setting up libaec-dev:armhf (1.1.3-1) ... Setting up libjpeg-dev:armhf (1:2.1.5-2+b2) ... Setting up libglib2.0-bin (2.78.4-6) ... Setting up gfortran-arm-linux-gnueabihf (4:13.2.0-7) ... Setting up pkgconf:armhf (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:armhf (2.0.18-1) ... Setting up libnl-route-3-200:armhf (3.7.0-0.3) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:armhf (2.4.7-7) ... Setting up libxml2-dev:armhf (2.9.14+dfsg-1.3+b2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up gfortran-13 (13.2.0-23) ... Setting up libgssapi-krb5-2:armhf (1.20.1-6+b1) ... Setting up libevent-extra-2.1-7t64:armhf (2.1.12-stable-8.1+b2) ... Setting up libreadline8t64:armhf (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libnl-3-dev:armhf (3.7.0-0.3) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libx11-6:armhf (2:1.8.7-1) ... Setting up libhwloc-dev:armhf (2.10.0-1+b1) ... Setting up libmount-dev:armhf (2.39.3-11) ... Setting up libibverbs1:armhf (50.0-2+b1) ... Setting up libcurl4t64:armhf (8.7.1-1) ... Setting up ibverbs-providers:armhf (50.0-2+b1) ... Setting up openssh-client (1:9.7p1-2+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.8-3+b3) ... Setting up libcurl3t64-gnutls:armhf (8.7.1-1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up libcurl4-gnutls-dev:armhf (8.7.1-1) ... Setting up man-db (2.12.0-3+b2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:armhf (535.171.04-1) ... Setting up libnl-route-3-dev:armhf (3.7.0-0.3) ... Setting up libevent-dev (2.1.12-stable-8.1+b2) ... Setting up librdmacm1t64:armhf (50.0-2+b1) ... Setting up libhdf5-103-1t64:armhf (1.10.10+repack-3.2) ... Setting up libpython3-stdlib:armhf (3.11.8-1) ... Setting up libfabric1:armhf (1.17.0-3+b1) ... Setting up libhdf5-hl-100t64:armhf (1.10.10+repack-3.2) ... Setting up python3.11 (3.11.8-3+b3) ... Setting up libnetcdf19t64:armhf (1:4.9.2-5+b1) ... Setting up libhdf5-cpp-103-1t64:armhf (1.10.10+repack-3.2) ... Setting up libhdf5-fortran-102t64:armhf (1.10.10+repack-3.2) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up dh-exec (0.29) ... Setting up libibverbs-dev:armhf (50.0-2+b1) ... Setting up libhwloc-plugins:armhf (2.10.0-1+b1) ... Setting up python3-packaging (23.2-1) ... Setting up libpmix2t64:armhf (5.0.1-4.1) ... Setting up libopenmpi3t64:armhf (4.1.6-7+b1) ... Setting up libhdf5-hl-cpp-100t64:armhf (1.10.10+repack-3.2) ... Setting up libpmix-dev:armhf (5.0.1-4.1) ... Setting up openmpi-bin (4.1.6-7+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libglib2.0-dev-bin (2.78.4-6) ... Setting up libhdf5-hl-fortran-100t64:armhf (1.10.10+repack-3.2) ... Setting up libglib2.0-dev:armhf (2.78.4-6) ... Setting up libhdf5-dev (1.10.10+repack-3.2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgts-dev:armhf (0.7.6+darcs121130-5.2) ... Setting up libnetcdf-dev (1:4.9.2-5+b1) ... Setting up libopenmpi-dev:armhf (4.1.6-7+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up mpi-default-dev (1.15) ... Processing triggers for libc-bin (2.37-15.1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/5924/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/5924/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/gerris-20131206+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gerris_20131206+dfsg-19.1_source.changes dpkg-buildpackage: info: source package gerris dpkg-buildpackage: info: source version 20131206+dfsg-19.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steve Langasek dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:773: AM_INIT_AUTOMAKE is expanded from... configure.ac:50: the top level configure.ac:53: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:53: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:1125: AM_CONFIG_HEADER is expanded from... configure.ac:53: the top level configure.ac:117: warning: The macro `AC_LIBTOOL_WIN32_DLL' is obsolete. configure.ac:117: You should run autoupdate. m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:117: warning: AC_LIBTOOL_WIN32_DLL: Remove this warning and the call to _LT_SET_OPTION when you configure.ac:117: put the 'win32-dll' option into LT_INIT's first parameter. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:118: warning: The macro `AM_PROG_LIBTOOL' is obsolete. configure.ac:118: You should run autoupdate. m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from... configure.ac:118: the top level configure.ac:143: warning: The macro `AC_ISC_POSIX' is obsolete. configure.ac:143: You should run autoupdate. ./lib/autoconf/specific.m4:550: AC_ISC_POSIX is expanded from... configure.ac:143: the top level configure.ac:144: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:144: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:144: the top level configure.ac:148: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:148: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:148: the top level configure.ac:183: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:183: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:183: the top level configure.ac:276: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level configure.ac:276: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:50: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:108: installing './compile' configure.ac:50: installing './missing' doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory, doc/Makefile.am:12: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. doc/Makefile.am: installing './depcomp' doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory, doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled parallel-tests: installing './test-driver' modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' dh_auto_configure -- --enable-mpi ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpi checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mpicc... yes checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mpicc... none checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... dlltool checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gawk... (cached) mawk checking for library containing strerror... none required checking for egrep... (cached) /usr/bin/grep -E checking whether pointers can be stored in doubles... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for gts >= 0.7.4... yes checking whether modules are supported... yes checking for pkg-config... yes checking for m4... yes checking check whether m4 accepts the -P option... yes checking for pj_fwd in -lproj... no configure: WARNING: libproj not found. Map module will not be available. checking for proj_api.h... no checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 0.2.5... yes checking for nc_open in -lnetcdf... yes checking for netcdf.h... yes checking for g77... no checking for xlf... no checking for f77... f77 checking whether the compiler supports GNU Fortran 77... yes checking whether f77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for ode-config... no configure: WARNING: ODE not found. ode module will not be available. checking for HYPRE_IJMatrixCreate in -lHYPRE... no configure: WARNING: HYPRE not found. hypre Module won't be available. checking for lis_initialize in -llis... no configure: WARNING: lis not found. lis Module won't be available. checking for fftw3 >= 3 ... no checking for fenv.h... yes checking for unistd.h... (cached) yes checking for getopt.h... yes checking for getopt_long... yes checking for g_mkdtemp... yes checking for open_memstream... yes checking for funopen... no checking for open_memstream... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gerris2D.pc config.status: creating src/gerris3D.pc config.status: creating tools/Makefile config.status: creating modules/Makefile config.status: creating modules/RStarTree/Makefile config.status: creating modules/kdt/Makefile config.status: creating modules/fes2004/Makefile config.status: creating modules/wavewatch/Makefile config.status: creating modules/culvert/Makefile config.status: creating test/Makefile config.status: creating doc/Makefile config.status: creating doc/tutorial/Makefile config.status: creating doc/examples/Makefile config.status: creating doc/manpages/Makefile config.status: creating doc/examples/gfs2doc config.status: creating doc/examples/gfs-highlight config.status: creating doc/examples/crossref.sh config.status: creating desktop/Makefile config.status: creating debian/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration summary System = arm-unknown-linux-gnueabihf C Compiler = mpicc C Flags = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 MPI enabled = yes GModule support = yes pkg-config = yes m4 = yes m4 options = -P open_memstream = yes Modules map = no tide = yes stokes = yes wavewatch = no hypre = no lis = no agmg = no ode = no bubbles = yes fft = no make[1]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' dh_auto_build make -j1 make[1]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' make all-recursive make[2]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' Making all in src make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/src' make all-am make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/src' mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c:2605:38: warning: argument 4 of type 'gdouble[5]' {aka 'double[5]'} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as 'gdouble[4]' {aka 'double[4]'} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type 'FttDirection[2]' with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as 'FttDirection *' 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function] 126 | static GfsGradient interpolate_1D2 (FttCell * cell, | ^~~~~~~~~~~~~~~ fluid.c: In function 'face_bilinear': fluid.c:1151:37: warning: 'd[2]' is used uninitialized [-Wuninitialized] 1151 | d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2]; | ~~~~~~^~~~~~ fluid.c:1145:16: note: 'd[2]' was declared here 1145 | FttDirection d[3], d1[3]; | ^ In function 'gfs_cell_corner_values', inlined from 'gfs_cell_corner_values' at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 4 is outside array bounds of 'gdouble[4]' {aka 'double[4]'} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function 'gfs_cell_corner_values': fluid.c:2605:38: note: at offset 32 into object 'f' of size [0, 32] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function 'paint_mixed_leaf': solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function 'check_area_fractions': solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function 'check_solid_fractions': solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function 'set_merged': advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpi_boundary.c: In function 'gfs_boundary_mpi_init': mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations] 280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag); | ^~~~~~~~~~~~ In file included from utils.h:34, from boundary.h:24, from domain.h:23, from mpi_boundary.c:24: /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2744:20: note: declared here 2744 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) | ^~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function 'load_module': simulation.c:214:7: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function 'error_handler': simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:906, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function 'snprintf', inlined from 'error_handler' at simulation.c:1780:5: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ graphic.c: In function 'grow_curve': graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable] 1986 | FttVector p1; | ^~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable] 2619 | gdouble area = gfs_vof_center (cell, t, &fc); | ^~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable] 2871 | gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc); | ^~~~ vof.c: At top level: vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function 'add_vof_center': vof.c:2443:5: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'myc_normal': vof.c:897:3: warning: 'mycs' accessing 16 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type 'double[2]' In file included from vof.c:887: myc2d.h:6:13: note: in a call to function 'mycs' 6 | static void mycs(double c[3][3],double mxy[2]) | ^~~~ vof.c: In function 'gfs_fit_curvature': vof.c:2508:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2625:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2625 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2625:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2877:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2877 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2877:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function 'get_tmp_file': utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'current_time': utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'compile': utils.c:699:5: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function 'correct_normal_velocity': ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function 'gfs_map_read': map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function 'second_order_face_fractions': moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function 'old_solid_fractions_from_children': moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function 'matrix_a': metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type 'const double[3]' metric.c:1034:15: note: in a call to function 'excess_of_quad' 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function 'matrix_hy': metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type 'const double[3]' metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function 'matrix_hx': metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type 'const double[3]' metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type 'const double[3]' metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type 'const double[3]' metric.c:1039:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type 'const double[3]' metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type 'const double[3]' metric.c:1040:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type 'const double[3]' metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type 'const double[3]' metric.c:1041:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type 'const double[3]' metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type 'const double[3]' metric.c:1042:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c: In function 'gfs_cell_coarse_fine': fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c: At top level: fluid.c:2605:38: warning: argument 4 of type 'gdouble[9]' {aka 'double[9]'} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as 'gdouble[8]' {aka 'double[8]'} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type 'FttDirection[3]' with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as 'FttDirection *' 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ In function 'gfs_cell_corner_values', inlined from 'gfs_cell_corner_values' at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 8 is outside array bounds of 'gdouble[8]' {aka 'double[8]'} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function 'gfs_cell_corner_values': fluid.c:2605:38: note: at offset 64 into object 'f' of size [0, 64] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function 'set_solid_fractions_from_surface': solid.c:561:21: warning: comparison between 'FttComponent' and 'enum ' [-Wenum-compare] 561 | for (c = 1; c < FTT_NEIGHBORS; c++) | ^ solid.c: In function 'paint_mixed_leaf': solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function 'check_area_fractions': solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function 'check_solid_fractions': solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from solid.c:338: isocube.h: At top level: isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable] 95 | static FttDirection corner[8][3] = { | ^~~~~~ isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable] 47 | static FttVector edge[12][2] = { | ^~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function 'set_merged': advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpi_boundary.c: In function 'gfs_boundary_mpi_init': mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations] 280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag); | ^~~~~~~~~~~~ In file included from utils.h:34, from boundary.h:24, from domain.h:23, from mpi_boundary.c:24: /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2744:20: note: declared here 2744 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) | ^~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function 'load_module': simulation.c:214:7: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function 'error_handler': simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:906, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function 'snprintf', inlined from 'error_handler' at simulation.c:1780:5: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from graphic.c:42: isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable] 39 | static guint face_v[6][4] = { | ^~~~~~ isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable] 31 | static guint face[6][4][2] = { | ^~~~ isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable] 27 | static FttVector vertex[8] = { | ^~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function] 2682 | static void curvature_from_h (FttCell * cell, GfsDomain * domain, | ^~~~~~~~~~~~~~~~ vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function] 2646 | static gdouble neighboring_column (FttCell * cell, | ^~~~~~~~~~~~~~~~~~ vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function 'add_vof_center': vof.c:2443:5: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'myc_normal': vof.c:897:3: warning: 'mycs' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type 'double[3]' In file included from vof.c:889: myc.h:17:13: note: in a call to function 'mycs' 17 | static void mycs(double c[3][3][3],double mxyz[3]) | ^~~~ vof.c: In function 'gfs_fit_curvature': vof.c:2508:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2627:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2627 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2627:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2879:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2879 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2879:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function 'get_tmp_file': utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'current_time': utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'compile': utils.c:699:5: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function 'correct_normal_velocity': ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ unstructured.c: In function 'allocate_wallfaces': unstructured.c:437:5: warning: 'gfs_cut_cube_vertices' accessing 288 bytes in a region of size 168 [-Wstringop-overflow=] 437 | gfs_cut_cube_vertices (cell, -1, &s->ca, &normal, nodecutface, d, NULL, NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ unstructured.c:437:5: note: referencing argument 5 of type 'FttVector[12]' {aka 'struct _FttVector[12]'} unstructured.c:437:5: note: referencing argument 6 of type 'FttDirection[12]' unstructured.c:437:5: note: referencing argument 8 of type 'gdouble[12]' {aka 'double[12]'} In file included from unstructured.c:28: graphic.h:137:20: note: in a call to function 'gfs_cut_cube_vertices' 137 | guint gfs_cut_cube_vertices (FttCell * cell, | ^~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function 'gfs_map_read': map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function 'second_order_face_fractions': moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function 'old_solid_fractions_from_children': moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function 'matrix_a': metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type 'const double[3]' metric.c:1034:15: note: in a call to function 'excess_of_quad' 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function 'matrix_hy': metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type 'const double[3]' metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function 'matrix_hx': metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type 'const double[3]' metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type 'const double[3]' metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type 'const double[3]' metric.c:1039:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type 'const double[3]' metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type 'const double[3]' metric.c:1040:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type 'const double[3]' metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type 'const double[3]' metric.c:1041:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type 'const double[3]' metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type 'const double[3]' metric.c:1042:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/src' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/src' Making all in modules make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules' Making all in RStarTree make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from RStarTree.c:3: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RStarTree.c: In function 'BasicCheck': RStarTree.c:824:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 824 | fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte)); | ~~^ ~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:831:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 831 | fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int)); | ~~^ ~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:838:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 838 | fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo)); | ~~^ ~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:839:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 839 | fprintf(stderr,"%s %ld\n"," sizeof(int):",sizeof(int)); | ~~^ ~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:846:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 846 | fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir)); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:847:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 847 | fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock)); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:854:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 854 | fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters)); | ~~^ ~~~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:855:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=] 855 | fprintf(stderr,"%s %ld\n"," sizeof(typfixblock):",sizeof(typfixblock)); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInstDel.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInstDel.c: In function 'SplitAndDistributData': RSTInstDel.c:848:22: warning: 'validedge' may be used uninitialized [-Wmaybe-uninitialized] 848 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:751:37: note: 'validedge' was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:850:16: warning: 'validvalue' may be used uninitialized [-Wmaybe-uninitialized] 850 | if (value < validvalue) { | ^ RSTInstDel.c:753:17: note: 'validvalue' was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:938:24: warning: 'backvaledge' may be used uninitialized [-Wmaybe-uninitialized] 938 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:751:48: note: 'backvaledge' was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:940:16: warning: 'backvalvalue' may be used uninitialized [-Wmaybe-uninitialized] 940 | if (value < backvalvalue) { | ^ RSTInstDel.c:753:29: note: 'backvalvalue' was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:971:29: warning: 'axsortside' may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:744:32: note: 'axsortside' was declared here 744 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:745:7: note: 'axis' was declared here 745 | int axis; | ^~~~ RSTInstDel.c:978:16: warning: 'axisindex' may be used uninitialized [-Wmaybe-uninitialized] 978 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:748:7: note: 'axisindex' was declared here 748 | axisindex; | ^~~~~~~~~ RSTInstDel.c: In function 'SplitAndDistributDir': RSTInstDel.c:582:22: warning: 'validedge' may be used uninitialized [-Wmaybe-uninitialized] 582 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:485:37: note: 'validedge' was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:584:16: warning: 'validvalue' may be used uninitialized [-Wmaybe-uninitialized] 584 | if (value < validvalue) { | ^ RSTInstDel.c:487:17: note: 'validvalue' was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:672:24: warning: 'backvaledge' may be used uninitialized [-Wmaybe-uninitialized] 672 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:485:48: note: 'backvaledge' was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:674:16: warning: 'backvalvalue' may be used uninitialized [-Wmaybe-uninitialized] 674 | if (value < backvalvalue) { | ^ RSTInstDel.c:487:29: note: 'backvalvalue' was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:705:29: warning: 'axsortside' may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:478:32: note: 'axsortside' was declared here 478 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:479:7: note: 'axis' was declared here 479 | int axis; | ^~~~ RSTInstDel.c:712:16: warning: 'axisindex' may be used uninitialized [-Wmaybe-uninitialized] 712 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:482:7: note: 'axisindex' was declared here 482 | axisindex; | ^~~~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTJoin.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTUtil.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTUtil.c: In function 'Covers': RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable] 204 | int maxdim; | ^~~~~~ RSTUtil.c: In function 'ChooseSubtree': RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable] 546 | int maxexam, inv; | ^~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInOut.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInterUtil.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInterUtil.c: In function 'SetCheckDir': RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable] 208 | PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries; | ^~~~~~~~~~~~~~~~~~~~~~~~ RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable] 207 | PACKEDdirentrylen, REALdirentrylen, | ^~~~~~~~~~~~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTQuery.c:4: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' Making all in kdt make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from xyz2kdt.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function] 450 | static void kdt_rect_write (const KdtRect rect, FILE * fp) | ^~~~~~~~~~~~~~ kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function] 252 | static void kdt_write (KdtHeap * h, FILE * fp) | ^~~~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libkdt.la libkdt_la-kdt.lo /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt2kdt.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdtquery.c:21: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o kdtquery kdtquery-kdtquery.o -lkdt -lm make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' Making all in fes2004 make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo './'`fes2004_alloc.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from fes2004_lib.h:12, from fes2004_alloc.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo './'`fes2004_error.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from fes2004_error.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes] 4 | void print_error_1() | ^~~~~~~~~~~~~ fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes] 11 | void print_error_2() | ^~~~~~~~~~~~~ fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes] 18 | void print_error_3(char *message) | ^~~~~~~~~~~~~ fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes] 25 | void print_error_4(char *message) | ^~~~~~~~~~~~~ fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes] 32 | void print_error_5(char *message) | ^~~~~~~~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo './'`fes2004_extraction.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from fes2004_lib.h:12, from fes2004_extraction.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo './'`fes2004_init.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from fes2004_lib.h:12, from fes2004_init.c:2: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_init.c: In function 'init_spectrum': fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable] 42 | int rstatus; | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo './'`fes2004_io.c In file included from /usr/include/errno.h:25, from /usr/include/netcdf.h:17, from fes2004_io.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_io.c: In function 'load_netcdf_fes2004_data': fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable] 16 | int i,rstatus; | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo './'`fes2004_prediction.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from fes2004_lib.h:12, from fes2004_prediction.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo './'`fes2004_kernel.c In file included from /usr/include/errno.h:25, from /usr/include/netcdf.h:17, from fes2004_kernel.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_kernel.c: In function 'pred_coeur': fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable] 115 | double pi; | ^~ fes2004_kernel.c: In function 'extract_coeur': fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable] 191 | double pi; | ^~ fes2004_kernel.c: In function 'compute_admittance': fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable] 457 | int i,n,gsl_out; | ^~~~~~~ fes2004_kernel.c: In function 'astronomic_angle': fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable] 663 | double t2,t4,sin2I,s2; | ^~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libfes.la libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' Making all in wavewatch make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' Making all in culvert make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from check_inlet.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from boyd87.c:9: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o libboyd87.la libboyd87_la-boyd87.lo /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from check_outlet.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from discharge_table.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rsurface2kdt.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rsurface.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from rsurface.c:5: rsurface.h:16:1: warning: no semicolon at end of struct or union 16 | } RSurfaceSum; | ^ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm libtool: warning: '-version-info' is ignored for programs libtool: warning: '-release' is ignored for programs /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function 'polygon_contains': terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type 'const double[2]' terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type 'const double[2]' terrain.c:253:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type 'const double[2]' terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type 'const double[2]' terrain.c:255:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type 'const double[2]' terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type 'const double[2]' terrain.c:257:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type 'const double[2]' terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type 'const double[2]' terrain.c:259:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lkdt -lkdt -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function 'polygon_contains': terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type 'const double[2]' terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type 'const double[2]' terrain.c:253:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type 'const double[2]' terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type 'const double[2]' terrain.c:255:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type 'const double[2]' terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type 'const double[2]' terrain.c:257:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type 'const double[2]' terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type 'const double[2]' terrain.c:259:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lkdt -lkdt -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from df3.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function 'gfs_skew_symmetric_run': skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function 'gfs_skew_symmetric_run': skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../src/timestep.h:29, from ../src/simulation.h:28, from ../src/event.h:53, from ../src/solid.h:26: topics.c: In function 'print_interface': topics.c:1139:38: warning: array subscript 2 is above array bounds of 'GfsVariable *[2]' {aka 'struct _GfsVariable *[2]'} [-Warray-bounds=] 1139 | double nz = GFS_VALUE(cell, tv->m[2]); ../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE' 76 | #define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i]) | ^ In file included from topics.c:23: ../src/vof.h:77:17: note: while referencing 'm' 77 | GfsVariable * m[FTT_DIMENSION], * alpha; | ^ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/source.h:27, from ../src/river.h:27, from culvert.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lculvert -lboyd87 -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from layered.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tide.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tide.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from stokes.c:19: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=F77 --mode=compile f77 -g -O2 -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -c -o CW263.lo CW263.f CW263.f:45:72: 45 | 31 write(*,'(f9.3,8f8.3,1x,a)') xx,yy,uu,vv,ut,vt,du,dv,etah,ans | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 31 at (1) CW263.f:61:72: 61 | 32 write(*,'(f9.3,8f8.3,1x,1a)') xx,yy,uu,vv,ut,vt,du,dv,etah | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1) CW263.f:73:72: 73 | 33 write(*,'(f9.3,8f8.3)') xx,etah,uu,vv,ut,vt,du,dv,etah | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 33 at (1) CW263.f:126:72: 126 | 10 amp(i)= 0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:155:72: 155 | 14 amp(i)= (h/hm)*amp(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:209:72: 209 | do 10 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:210:72: 210 | 10 x(i)= x(i)+cos(j*th)*amp(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:217:72: 217 | 11 etas(i)= eta(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:219:72: 219 | 12 etas(nfun+i)= eta(nfun-i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:253:72: 253 | 40 eta(i)= x(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) CW263.f:257:72: 257 | 10 sm= sm+eta(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:272:72: 272 | do 18 j=1,nfun-2 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 18 at (1) CW263.f:296:72: 296 | do 23 n=1,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 23 at (1) CW263.f:304:72: 304 | 23 shcs(i,n)= sh*cs | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 23 at (1) CW263.f:311:72: 311 | do 12 j=2,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 12 at (1) CW263.f:314:72: 314 | 12 df(i,j)= chcs(i,n)*n*k | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:320:72: 320 | do 41 j=1,nfun-2 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 41 at (1) CW263.f:323:72: 323 | 42 dij= dij+da(i,n)*dex(n,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1) CW263.f:324:72: 324 | 41 dax(i,j)= dij | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 41 at (1) CW263.f:331:72: 331 | 13 sm= sm+da(i,m)*s(m)/k | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:332:72: 332 | 19 dax(i,nfun-1)= sm | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 19 at (1) CW263.f:340:72: 340 | do 24 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 24 at (1) CW263.f:345:72: 345 | 24 dcx(i,j)= r*dax(i,j)+a(i)*drx | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1) CW263.f:354:72: 354 | 15 sv= sv+n*k*c(n+1)*shsn(i,n) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 15 at (1) CW263.f:356:72: 356 | 14 vs(i)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:360:72: 360 | 16 sm= sm+f(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:365:72: 365 | 17 sq= sq+f(i)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 17 at (1) CW263.f:376:72: 376 | 22 sv= sv+n*k*dcx(n+1,j)*shsn(i,n)+(n*k)**2*c(n+1)*chsn(i,n)*dex(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1) CW263.f:378:72: 378 | 21 dvx(i,j)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1) CW263.f:386:72: 386 | : n**2*k*s(i)*c(n+1)*chsn(i,n) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 25 at (1) CW263.f:388:72: 388 | 20 dvx(i,j)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) CW263.f:393:72: 393 | do 44 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 44 at (1) CW263.f:394:72: 394 | 44 dfx(i,j)= (us(i)*dux(i,j)+vs(i)*dvx(i,j))/g+dex(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1) CW263.f:399:72: 399 | 46 sm= sm+dfx(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 46 at (1) CW263.f:401:72: 401 | do 45 i=1,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 45 at (1) CW263.f:402:72: 402 | 45 jac(i,j)= dfx(i,j)-sm | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 45 at (1) CW263.f:419:72: 419 | do 10 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:420:72: 420 | 10 c(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:424:72: 424 | 54 st= st+f(i,1)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 54 at (1) CW263.f:428:72: 428 | 16 g(i,1)= f(i,1)/st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:435:72: 435 | 20 st= st+g(i,j)*f(i,k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) CW263.f:436:72: 436 | 29 c(j,k)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 29 at (1) CW263.f:441:72: 441 | 22 st= st+c(j,k)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1) CW263.f:442:72: 442 | 21 g(i,k)= f(i,k)-st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1) CW263.f:445:72: 445 | 50 st= st+g(i,k)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1) CW263.f:448:72: 448 | 52 g(i,k)= g(i,k)/st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 52 at (1) CW263.f:453:72: 453 | 202 st= st+g(i,j)*g(i,k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 202 at (1) CW263.f:454:72: 454 | 200 db(j)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1) CW263.f:458:72: 458 | 206 st= st+db(j)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 206 at (1) CW263.f:459:72: 459 | 204 g(i,k)=g(i,k)-st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 204 at (1) CW263.f:464:72: 464 | 26 st= st+g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 26 at (1) CW263.f:465:72: 465 | 24 b(j)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1) CW263.f:470:72: 470 | 210 sb= sb+b(j)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1) CW263.f:471:72: 471 | 208 st= st+(sb-1.0d0)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 208 at (1) CW263.f:476:72: 476 | 30 st= st+cr(i,j)*b(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1) CW263.f:477:72: 477 | 28 a(i)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 28 at (1) CW263.f:482:72: 482 | 74 sb= sb+a(j)*f(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 74 at (1) CW263.f:483:72: 483 | 72 st= st+(sb-1.0d0)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 72 at (1) CW263.f:487:72: 487 | do 81 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 81 at (1) CW263.f:488:72: 488 | 81 dc(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 81 at (1) CW263.f:493:72: 493 | : -0.5d0*dly(1)*c(1,j)/c(1,1)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 82 at (1) CW263.f:498:72: 498 | 86 st= st+c(m,l)*dc(m,l) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 86 at (1) CW263.f:506:72: 506 | 90 st= st+c(j,m)*dc(j,l)+dc(j,m)*c(j,l) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1) CW263.f:508:72: 508 | : -st/c(l,l)-0.5d0*dly(l)*c(l,m)/c(l,l)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 85 at (1) CW263.f:511:72: 511 | do 92 m=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 92 at (1) CW263.f:514:72: 514 | 96 st= st+g(l,j)*dc(j,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 96 at (1) CW263.f:515:72: 515 | 92 br(l,m)= -st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 92 at (1) CW263.f:517:72: 517 | 94 br(k,m)= br(k,m)+df(k,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 94 at (1) CW263.f:523:72: 523 | 36 st= st+br(i,l)*cr(l,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 36 at (1) CW263.f:524:72: 524 | 34 sb= sb+st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 34 at (1) CW263.f:525:72: 525 | 32 db(j)= sb | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1) CW263.f:529:72: 529 | 40 st= st-dc(i,j)*a(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) CW263.f:530:72: 530 | 38 dly(i)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 38 at (1) CW263.f:534:72: 534 | 44 st= st+cr(i,j)*dly(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1) CW263.f:535:72: 535 | 42 da(i,k)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1) CW263.f:550:72: 550 | do 10 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:551:72: 551 | 10 w(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:562:72: 562 | 14 sum= sum+c(i,m)*w(m,j)/c(m,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:563:72: 563 | 13 w(i,j)= -sum | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:567:72: 567 | do 16 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 16 at (1) CW263.f:568:72: 568 | 16 w(i,j)= w(i,j)/sum | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:632:72: 632 | 4 a(k,j)= a(k,j)/c | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1) CW263.f:637:72: 637 | 5 a(i,j)= a(i,j)-c*a(k,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1) CW263.f:638:72: 638 | 10 b(i)= b(i)-c*b(k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:648:72: 648 | do 200 j=k1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1) CW263.f:649:72: 649 | 200 b(k)= b(k)-a(k,j)*b(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1) CW263.f:651:72: 651 | 300 cc(i)= b(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1) CW263.f:676:72: 676 | 16 xcm(i)= xc(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:687:72: 687 | 18 xc(i)= xcm(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 18 at (1) CW263.f:694:72: 694 | do 10 j=1,nv | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:697:72: 697 | 11 ra= ra+fjacc(l,i)*fjacc(l,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:698:72: 698 | 10 aa(i,j)= ra | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:703:72: 703 | 13 ra= ra+fvecc(l)*fjacc(l,i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:704:72: 704 | 12 bb(i)= -ra | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:711:72: 711 | 14 xc(i)= xc(i)+orf*cc(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:745:72: 745 | 10 sm=sm+f(i)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:822:72: 822 | 12 um= t*ul-u0+f(m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:824:72: 824 | 10 b(k)= s*vl*um*rn | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:856:72: 856 | 11 etah= etah+cos(i*theta)*amp(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:873:72: 873 | 10 s4= s4+i*i*sh*cs*c(ip) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) /bin/sh ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from stokes.c:19: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from bubbles.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ bubbles.c: In function 'bubble_fraction_init': bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, BubbleData *)'} [-Wincompatible-pointer-types] 421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles; | ^ bubbles.c: In function 'bubble_fraction_dt_init': bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, BubbleData *)'} [-Wincompatible-pointer-types] 474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles; | ^ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/sh ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from bubbles.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ bubbles.c: In function 'bubble_fraction_init': bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, BubbleData *)'} [-Wincompatible-pointer-types] 421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles; | ^ bubbles.c: In function 'bubble_fraction_dt_init': bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, BubbleData *)'} [-Wincompatible-pointer-types] 474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles; | ^ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules' Making all in tools make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/tools' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function 'main': gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~ gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function 'main': gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from streamanime.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ppmcombine.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ppmcombine.c: In function 'main': ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable] 36 | gboolean verbose = FALSE; | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function 'main': gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function 'main': gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from shapes.c:20: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function] 288 | static void surface_add_rectangular_channel_shape (GtsSurface * s, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o shapes shapes.o -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/tools' Making all in test make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/test' Making all in doc make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc' ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps Making all in tutorial make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' Making all in examples make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo './'`classes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from classes.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../src/init.c' || echo './'`../../src/init.c ../../src/init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from ../../src/init.c:34: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo './'`modules.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/limits.h:205, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/syslimits.h:7, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/limits.h:34, from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:34, from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/glib-2.0/gmodule.h:30, from modules.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 ./modules ../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list (./classes && sh ./modulesyms.sh ../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic echo "# Language file for source-highlight" > gfs.lang echo "# Generated automatically by classes.c" >> gfs.lang awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang echo "comment start \"#\"" >> gfs.lang echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang echo "(defvar gfs-abbrevs '(" > gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el echo "(defvar gfs-modules '(" >> gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el echo "(provide 'gfs-keywords)" >> gfs-keywords.el sh ./gfs.php.sh > gfs.php make all-am make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' Making all in manpages make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo './'`autoclass.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from autoclass.c:1: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ autoclass.c: In function 'main': autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable] 6 | GtsObjectClass ** klass; | ^~~~~ mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../src/init.c' || echo './'`../src/init.c ../src/init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from ../src/init.c:34: /usr/include/features.h:195:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 195 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/sh ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/gerris-20131206+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-z,relro -Wl,-z,now -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc' Making all in desktop make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' Making all in debian make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' make[2]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' make[1]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' Making install in src make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/src' make install-am make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/src' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/src' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/sh ../libtool --silent --mode=install /usr/bin/install -c libgfs2D.la libgfs3D.la '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/bin/install -c gerris2D gerris3D '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/include' /usr/bin/install -c -m 644 gfs.h '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' /usr/bin/install -c -m 644 m4.awk '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/include/gerris' /usr/bin/install -c -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/include/gerris' make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/src' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/src' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/src' Making install in modules make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules' Making install in RStarTree make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/RStarTree' Making install in kdt make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /bin/sh ../../libtool --silent --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/kdt' Making install in fes2004 make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/fes2004' Making install in wavewatch make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/wavewatch' Making install in culvert make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules/culvert' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/modules' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/bin/install -c rsurface2kdt '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris' /bin/sh ../libtool --silent --mode=install /usr/bin/install -c libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris' libtool: warning: relinking 'libterrain2D.la' libtool: warning: relinking 'libterrain3D.la' libtool: warning: relinking 'libparticulates2D.la' libtool: warning: relinking 'libparticulates3D.la' libtool: warning: relinking 'libokada2D.la' libtool: warning: relinking 'libokada3D.la' libtool: warning: relinking 'libdf33D.la' libtool: warning: relinking 'libelectrohydro2D.la' libtool: warning: relinking 'libelectrohydro3D.la' libtool: warning: relinking 'libskewsymmetric2D.la' libtool: warning: relinking 'libskewsymmetric3D.la' libtool: warning: relinking 'libtopics2D.la' libtool: warning: relinking 'libtopics3D.la' libtool: warning: relinking 'libculvert2D.la' libtool: warning: relinking 'liblayered2D.la' libtool: warning: relinking 'libtide2D.la' libtool: warning: relinking 'libtide3D.la' libtool: warning: relinking 'libstokes2D.la' libtool: warning: relinking 'libstokes3D.la' libtool: warning: relinking 'libbubbles2D.la' libtool: warning: relinking 'libbubbles3D.la' libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/modules' Making install in tools make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/tools' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/tools' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/tools' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/tools' Making install in test make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/test' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/test' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/test' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/test' Making install in doc make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc' Making install in tutorial make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/tutorial' Making install in examples make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make install-am make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make[6]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /usr/bin/install -c gfs2doc gfs-highlight gfsxref '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' /usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' make[6]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/examples' Making install in manpages make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1' make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc/manpages' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc' make[5]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/doc' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/doc' Making install in desktop make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes' /usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes' /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages' /usr/bin/install -c -m 644 gerris.xml '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/desktop' Making install in debian make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg/debian' make[3]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' make[4]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' /usr/bin/install -c build_function libtool '/build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris' make[4]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' make[3]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' make[2]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' find /build/reproducible-path/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f sed -i -e "s/mpicc/gcc/g" /build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function rm -rf /build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin/darcs2dist rm -rf /build/reproducible-path/gerris-20131206+dfsg/debian/tmp/usr/bin/gfs2doc make[1]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/gerris-20131206+dfsg' dh_installchangelogs ChangeLog make[1]: Leaving directory '/build/reproducible-path/gerris-20131206+dfsg' dh_installman dh_lintian dh_icons dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs3D.a exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: gerris (10), libgfs-1.3-2t64 (4), libgfs-dev (5) * dh_installdocs: gerris (5), libgfs-1.3-2t64 (0), libgfs-dev (0) * dh_installman: gerris (0), libgfs-1.3-2t64 (0), libgfs-dev (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "arm-linux-gnueabihf", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libgfs-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-19.1_armhf.deb'. dpkg-deb: building package 'gerris-dbgsym' in '../gerris-dbgsym_20131206+dfsg-19.1_armhf.deb'. dpkg-deb: building package 'libgfs-1.3-2t64' in '../libgfs-1.3-2t64_20131206+dfsg-19.1_armhf.deb'. dpkg-deb: building package 'libgfs-1.3-2t64-dbgsym' in '../libgfs-1.3-2t64-dbgsym_20131206+dfsg-19.1_armhf.deb'. dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-19.1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../gerris_20131206+dfsg-19.1_armhf.buildinfo dpkg-genchanges --build=binary -O../gerris_20131206+dfsg-19.1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/5924/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/5924/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/5924 and its subdirectories I: Current time: Sat Mar 30 09:04:17 +14 2024 I: pbuilder-time-stamp: 1711739057