I: pbuilder: network access will be disabled during build
I: Current time: Thu Dec 18 13:53:58 +14 2025
I: pbuilder-time-stamp: 1766015638
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [r-bioc-mofa_1.6.1+dfsg-13.dsc]
I: copying [./r-bioc-mofa_1.6.1+dfsg.orig.tar.xz]
I: copying [./r-bioc-mofa_1.6.1+dfsg-13.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sun Aug 18 09:43:04 2024 
gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./r-bioc-mofa_1.6.1+dfsg-13.dsc: no acceptable signature found
dpkg-source: info: extracting r-bioc-mofa in r-bioc-mofa-1.6.1+dfsg
dpkg-source: info: unpacking r-bioc-mofa_1.6.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-mofa_1.6.1+dfsg-13.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying r-api-bioc.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/D01_modify_environment starting
debug: Running on codethink03-arm64.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Dec 17 23:54 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu")
  BASH_VERSION='5.2.32(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=arm64
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DIRSTACK=()
  DISTRIBUTION=unstable
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=aarch64
  HOST_ARCH=arm64
  IFS=' 	
  '
  INVOCATION_ID=8d2f40c929504286a9c21450997b51e0
  LANG=C
  LANGUAGE=nl_BE:nl
  LC_ALL=C
  MACHTYPE=aarch64-unknown-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=1602220
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.pYoZ5HXc/pbuilderrc_WTQb --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.pYoZ5HXc/b2 --logfile b2/build.log r-bioc-mofa_1.6.1+dfsg-13.dsc'
  SUDO_GID=109
  SUDO_UID=104
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://192.168.101.4:3128
I: uname -a
  Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Aug  4  2024 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-r, r-base-dev, xvfb, r-bioc-rhdf5, r-cran-dplyr, r-cran-reshape2, r-cran-pheatmap, r-cran-corrplot, r-cran-ggplot2, r-cran-ggbeeswarm, r-cran-scales, r-cran-ggally, r-cran-rcolorbrewer, r-cran-cowplot, r-cran-ggrepel, r-bioc-biobase, r-cran-doparallel, r-cran-foreach, r-cran-reticulate, r-bioc-multiassayexperiment, python3-all, dh-sequence-python3, python3-pandas, python3-setuptools, python3-scipy, python3-numpy, python3-sklearn, python3-h5py
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 20089 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-r; however:
  Package dh-r is not installed.
 pbuilder-satisfydepends-dummy depends on r-base-dev; however:
  Package r-base-dev is not installed.
 pbuilder-satisfydepends-dummy depends on xvfb; however:
  Package xvfb is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-rhdf5; however:
  Package r-bioc-rhdf5 is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-dplyr; however:
  Package r-cran-dplyr is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-reshape2; however:
  Package r-cran-reshape2 is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-pheatmap; however:
  Package r-cran-pheatmap is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-corrplot; however:
  Package r-cran-corrplot is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-ggplot2; however:
  Package r-cran-ggplot2 is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-ggbeeswarm; however:
  Package r-cran-ggbeeswarm is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-scales; however:
  Package r-cran-scales is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-ggally; however:
  Package r-cran-ggally is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-rcolorbrewer; however:
  Package r-cran-rcolorbrewer is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-cowplot; however:
  Package r-cran-cowplot is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-ggrepel; however:
  Package r-cran-ggrepel is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-biobase; however:
  Package r-bioc-biobase is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-doparallel; however:
  Package r-cran-doparallel is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-foreach; however:
  Package r-cran-foreach is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-reticulate; however:
  Package r-cran-reticulate is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-multiassayexperiment; however:
  Package r-bioc-multiassayexperiment is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all; however:
  Package python3-all is not installed.
 pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
  Package dh-sequence-python3 is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pandas; however:
  Package python3-pandas is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on python3-scipy; however:
  Package python3-scipy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sklearn; however:
  Package python3-sklearn is not installed.
 pbuilder-satisfydepends-dummy depends on python3-h5py; however:
  Package python3-h5py is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} comerr-dev{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-aarch64-linux-gnu{a} gfortran-aarch64-linux-gnu{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libblosc1{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libdynaloader-functions-perl{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libevent-2.1-7t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgfortran-14-dev{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libldap-dev{a} liblerc4{a} libllvm19{a} liblwp-mediatypes-perl{a} liblzf1{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libp11-kit-dev{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline-dev{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsnappy1v5{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunbound8{a} libunwind8{a} liburi-perl{a} libvariable-magic-perl{a} libvulkan1{a} libwayland-server0{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxft2{a} libxkbfile1{a} libxml2{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxss1{a} libxt6t64{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} littler{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} nettle-dev{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-autocommand{a} python3-dateutil{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-joblib{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-scipy{a} python3-setuptools{a} python3-sklearn{a} python3-sklearn-lib{a} python3-threadpoolctl{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} r-base-core{a} r-base-dev{a} r-bioc-biobase{a} r-bioc-biocbaseutils{a} r-bioc-biocgenerics{a} r-bioc-delayedarray{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-genomicranges{a} r-bioc-iranges{a} r-bioc-matrixgenerics{a} r-bioc-multiassayexperiment{a} r-bioc-rhdf5{a} r-bioc-rhdf5filters{a} r-bioc-rhdf5lib{a} r-bioc-s4arrays{a} r-bioc-s4vectors{a} r-bioc-sparsearray{a} r-bioc-summarizedexperiment{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-abind{a} r-cran-askpass{a} r-cran-beeswarm{a} r-cran-cli{a} r-cran-codetools{a} r-cran-colorspace{a} r-cran-corrplot{a} r-cran-cowplot{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-doparallel{a} r-cran-dplyr{a} r-cran-ellipsis{a} r-cran-fansi{a} r-cran-farver{a} r-cran-forcats{a} r-cran-foreach{a} r-cran-generics{a} r-cran-ggally{a} r-cran-ggbeeswarm{a} r-cran-ggplot2{a} r-cran-ggrepel{a} r-cran-ggstats{a} r-cran-glue{a} r-cran-gtable{a} r-cran-here{a} r-cran-hms{a} r-cran-httr{a} r-cran-isoband{a} r-cran-iterators{a} r-cran-jsonlite{a} r-cran-labeling{a} r-cran-lattice{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-mgcv{a} r-cran-mime{a} r-cran-munsell{a} r-cran-nlme{a} r-cran-openssl{a} r-cran-patchwork{a} r-cran-pheatmap{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plyr{a} r-cran-png{a} r-cran-prettyunits{a} r-cran-progress{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcpptoml{a} r-cran-reshape2{a} r-cran-reticulate{a} r-cran-rlang{a} r-cran-rprojroot{a} r-cran-scales{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-vipor{a} r-cran-viridislite{a} r-cran-withr{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} x11-xkb-utils{a} xauth{a} xdg-utils{a} xkb-data{a} xserver-common{a} xvfb{a} zip{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libtasn1-doc libx11-protocol-perl linux-sysctl-defaults lynx mesa-vulkan-drivers psmisc publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-psutil python3-pytest python3-simplejson python3-tables r-cran-base64enc r-cran-bench r-cran-bit64 r-cran-brio r-cran-broom r-cran-broom.helpers r-cran-cairo r-cran-callr r-cran-caret r-cran-covr r-cran-crosstalk r-cran-data.table r-cran-dbi r-cran-dbplyr r-cran-decor r-cran-desc r-cran-devtools r-cran-dichromat r-cran-digest r-cran-emmeans r-cran-formattable r-cran-fs r-cran-geosphere r-cran-ggforce r-cran-gridextra r-cran-gridgraphics r-cran-hexbin r-cran-hmisc r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-igraph r-cran-intergraph r-cran-itertools r-cran-jpeg r-cran-kernlab r-cran-kernsmooth r-cran-knitr r-cran-labelled r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-magick r-cran-mapproj r-cran-maps r-cran-markdown r-cran-microbenchmark r-cran-mlbench r-cran-mockery r-cran-mockr r-cran-multcomp r-cran-mvtnorm r-cran-network r-cran-nnet r-cran-parameters r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-profvis r-cran-ps r-cran-pscl r-cran-quantreg r-cran-r.devices r-cran-r.rsp r-cran-ragg r-cran-readr r-cran-reshape r-cran-rmarkdown r-cran-rmysql r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rsqlite r-cran-rstudioapi r-cran-runit r-cran-seriation r-cran-sf r-cran-shiny r-cran-shinyjs r-cran-sna r-cran-sodium r-cran-spelling r-cran-survey r-cran-survival r-cran-svglite r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-vcd r-cran-vdiffr r-cran-venndiagram r-cran-vioplot r-cran-viridis r-cran-waldo r-cran-webutils r-cran-whoami r-cran-xml2 r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs xfonts-base 
0 packages upgraded, 408 newly installed, 0 to remove and 0 not upgraded.
Need to get 296 MB of archives. After unpacking 964 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB]
Get: 2 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB]
Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB]
Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB]
Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB]
Get: 8 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB]
Get: 9 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB]
Get: 10 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB]
Get: 11 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B]
Get: 12 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB]
Get: 13 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB]
Get: 14 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 15 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB]
Get: 16 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB]
Get: 17 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB]
Get: 18 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB]
Get: 19 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB]
Get: 20 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB]
Get: 21 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B]
Get: 22 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.0-2 [850 kB]
Get: 24 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.0-2 [1838 kB]
Get: 25 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB]
Get: 26 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB]
Get: 27 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB]
Get: 28 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.3.2-2 [1347 kB]
Get: 29 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB]
Get: 30 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB]
Get: 31 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB]
Get: 32 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB]
Get: 33 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB]
Get: 34 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB]
Get: 35 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB]
Get: 36 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get: 37 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB]
Get: 38 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB]
Get: 39 http://deb.debian.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB]
Get: 40 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get: 41 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB]
Get: 42 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get: 43 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get: 44 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB]
Get: 45 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.1-1+b1 [55.1 kB]
Get: 46 http://deb.debian.org/debian unstable/main arm64 dctrl-tools arm64 2.24-3+b1 [125 kB]
Get: 47 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get: 48 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB]
Get: 49 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 50 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 51 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 52 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 53 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get: 54 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get: 55 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB]
Get: 56 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
Get: 57 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB]
Get: 58 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 59 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 60 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB]
Get: 61 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 62 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get: 63 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 64 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 65 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 66 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 67 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 68 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get: 69 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 70 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 71 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get: 72 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20241024 [109 kB]
Get: 73 http://deb.debian.org/debian unstable/main arm64 zip arm64 3.0-14+b1 [227 kB]
Get: 74 http://deb.debian.org/debian unstable/main arm64 unzip arm64 6.0-28+b1 [158 kB]
Get: 75 http://deb.debian.org/debian unstable/main arm64 libpaper1 arm64 1.1.29+b2 [13.0 kB]
Get: 76 http://deb.debian.org/debian unstable/main arm64 libpaper-utils arm64 1.1.29+b2 [9128 B]
Get: 77 http://deb.debian.org/debian unstable/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB]
Get: 78 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB]
Get: 79 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get: 80 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB]
Get: 81 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB]
Get: 82 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 83 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 84 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB]
Get: 85 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB]
Get: 86 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB]
Get: 87 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB]
Get: 88 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3+b2 [24.4 kB]
Get: 89 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB]
Get: 90 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 91 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB]
Get: 92 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB]
Get: 93 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB]
Get: 94 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB]
Get: 95 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB]
Get: 96 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.2-2 [483 kB]
Get: 97 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB]
Get: 98 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB]
Get: 99 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB]
Get: 100 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB]
Get: 101 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB]
Get: 102 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB]
Get: 103 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB]
Get: 104 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB]
Get: 105 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get: 106 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get: 107 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB]
Get: 108 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB]
Get: 109 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB]
Get: 110 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB]
Get: 111 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB]
Get: 112 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB]
Get: 113 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB]
Get: 114 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB]
Get: 115 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB]
Get: 116 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB]
Get: 117 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB]
Get: 118 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB]
Get: 119 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB]
Get: 120 http://deb.debian.org/debian unstable/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [982 kB]
Get: 121 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB]
Get: 122 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB]
Get: 123 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB]
Get: 124 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB]
Get: 125 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB]
Get: 126 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB]
Get: 127 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23.1 [216 kB]
Get: 128 http://deb.debian.org/debian unstable/main arm64 libxss1 arm64 1:1.2.3-1+b2 [17.1 kB]
Get: 129 http://deb.debian.org/debian unstable/main arm64 libtk8.6 arm64 8.6.15-1 [738 kB]
Get: 130 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB]
Get: 131 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB]
Get: 132 http://deb.debian.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.2+b1 [173 kB]
Get: 133 http://deb.debian.org/debian unstable/main arm64 r-base-core arm64 4.4.2-1 [28.0 MB]
Get: 134 http://deb.debian.org/debian unstable/main arm64 libgfortran-14-dev arm64 14.2.0-8 [418 kB]
Get: 135 http://deb.debian.org/debian unstable/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-8 [9791 kB]
Get: 136 http://deb.debian.org/debian unstable/main arm64 gfortran-14 arm64 14.2.0-8 [12.2 kB]
Get: 137 http://deb.debian.org/debian unstable/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1 [1284 B]
Get: 138 http://deb.debian.org/debian unstable/main arm64 gfortran arm64 4:14.2.0-1 [1424 B]
Get: 139 http://deb.debian.org/debian unstable/main arm64 libblas-dev arm64 3.12.0-3+b1 [106 kB]
Get: 140 http://deb.debian.org/debian unstable/main arm64 liblapack-dev arm64 3.12.0-3+b1 [3709 kB]
Get: 141 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5-2+b1 [96.1 kB]
Get: 142 http://deb.debian.org/debian unstable/main arm64 libncurses-dev arm64 6.5-2+b1 [338 kB]
Get: 143 http://deb.debian.org/debian unstable/main arm64 libreadline-dev arm64 8.2-5 [155 kB]
Get: 144 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB]
Get: 145 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB]
Get: 146 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.42-4+b2 [220 kB]
Get: 147 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.42-4+b2 [211 kB]
Get: 148 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.42-4+b2 [55.9 kB]
Get: 149 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.42-4+b2 [683 kB]
Get: 150 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB]
Get: 151 http://deb.debian.org/debian unstable/main arm64 libpng-dev arm64 1.6.44-2 [360 kB]
Get: 152 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB]
Get: 153 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB]
Get: 154 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB]
Get: 155 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB]
Get: 156 http://deb.debian.org/debian unstable/main arm64 libxmuu1 arm64 2:1.1.3-3+b3 [22.0 kB]
Get: 157 http://deb.debian.org/debian unstable/main arm64 xauth arm64 1:1.1.2-1+b1 [35.9 kB]
Get: 158 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get: 159 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get: 160 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get: 161 http://deb.debian.org/debian unstable/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3+b1 [192 kB]
Get: 162 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB]
Get: 163 http://deb.debian.org/debian unstable/main arm64 r-base-dev all 4.4.2-1 [4516 B]
Get: 164 http://deb.debian.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 165 http://deb.debian.org/debian unstable/main arm64 libswitch-perl all 2.17-3 [20.3 kB]
Get: 166 http://deb.debian.org/debian unstable/main arm64 libclone-perl arm64 0.47-1+b1 [13.7 kB]
Get: 167 http://deb.debian.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 168 http://deb.debian.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 169 http://deb.debian.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 170 http://deb.debian.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB]
Get: 171 http://deb.debian.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 172 http://deb.debian.org/debian unstable/main arm64 liburi-perl all 5.30-1 [105 kB]
Get: 173 http://deb.debian.org/debian unstable/main arm64 libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 174 http://deb.debian.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3+b1 [23.7 kB]
Get: 175 http://deb.debian.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB]
Get: 176 http://deb.debian.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB]
Get: 177 http://deb.debian.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b2 [10.6 kB]
Get: 178 http://deb.debian.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get: 179 http://deb.debian.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-1+b1 [16.3 kB]
Get: 180 http://deb.debian.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b4 [22.3 kB]
Get: 181 http://deb.debian.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 182 http://deb.debian.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 183 http://deb.debian.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get: 184 http://deb.debian.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB]
Get: 185 http://deb.debian.org/debian unstable/main arm64 libclass-load-perl all 0.25-2 [15.3 kB]
Get: 186 http://deb.debian.org/debian unstable/main arm64 libclass-load-xs-perl arm64 0.10-2+b4 [14.3 kB]
Get: 187 http://deb.debian.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get: 188 http://deb.debian.org/debian unstable/main arm64 libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get: 189 http://deb.debian.org/debian unstable/main arm64 libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get: 190 http://deb.debian.org/debian unstable/main arm64 libclass-c3-perl all 0.35-2 [21.0 kB]
Get: 191 http://deb.debian.org/debian unstable/main arm64 libmro-compat-perl all 0.15-2 [11.8 kB]
Get: 192 http://deb.debian.org/debian unstable/main arm64 libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get: 193 http://deb.debian.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB]
Get: 194 http://deb.debian.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB]
Get: 195 http://deb.debian.org/debian unstable/main arm64 libeval-closure-perl all 0.14-3 [11.2 kB]
Get: 196 http://deb.debian.org/debian unstable/main arm64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get: 197 http://deb.debian.org/debian unstable/main arm64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get: 198 http://deb.debian.org/debian unstable/main arm64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB]
Get: 199 http://deb.debian.org/debian unstable/main arm64 libpackage-stash-xs-perl arm64 0.30-1+b4 [19.0 kB]
Get: 200 http://deb.debian.org/debian unstable/main arm64 libmoose-perl arm64 2.2207-1+b2 [766 kB]
Get: 201 http://deb.debian.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1+b1 [43.9 kB]
Get: 202 http://deb.debian.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB]
Get: 203 http://deb.debian.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3+b3 [11.2 kB]
Get: 204 http://deb.debian.org/debian unstable/main arm64 libsub-name-perl arm64 0.27-1+b3 [12.4 kB]
Get: 205 http://deb.debian.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get: 206 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.4.0-1+b1 [59.6 kB]
Get: 207 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.6.0-1 [112 kB]
Get: 208 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.6.0-1 [18.5 kB]
Get: 209 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.11.0-1 [331 kB]
Get: 210 http://deb.debian.org/debian unstable/main arm64 libwww-curl-perl arm64 4.17-11 [57.3 kB]
Get: 211 http://deb.debian.org/debian unstable/main arm64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB]
Get: 212 http://deb.debian.org/debian unstable/main arm64 dh-r all 20231212 [42.2 kB]
Get: 213 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB]
Get: 214 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB]
Get: 215 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB]
Get: 216 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB]
Get: 217 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB]
Get: 218 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB]
Get: 219 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB]
Get: 220 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B]
Get: 221 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB]
Get: 222 http://deb.debian.org/debian unstable/main arm64 libsnappy1v5 arm64 1.2.1-1+b1 [28.7 kB]
Get: 223 http://deb.debian.org/debian unstable/main arm64 libblosc1 arm64 1.21.5+ds-1+b2 [39.2 kB]
Get: 224 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB]
Get: 225 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB]
Get: 226 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB]
Get: 227 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.18+dfsg-3+b1 [300 kB]
Get: 228 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB]
Get: 229 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB]
Get: 230 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB]
Get: 231 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB]
Get: 232 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB]
Get: 233 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1 [553 kB]
Get: 234 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB]
Get: 235 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB]
Get: 236 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB]
Get: 237 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB]
Get: 238 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB]
Get: 239 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB]
Get: 240 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB]
Get: 241 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB]
Get: 242 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get: 243 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB]
Get: 244 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.0-1 [447 kB]
Get: 245 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B]
Get: 246 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB]
Get: 247 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB]
Get: 248 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB]
Get: 249 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB]
Get: 250 http://deb.debian.org/debian unstable/main arm64 libfontenc1 arm64 1:1.1.8-1+b1 [22.5 kB]
Get: 251 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB]
Get: 252 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB]
Get: 253 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.2.6-1 [47.8 kB]
Get: 254 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB]
Get: 255 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.3-2 [23.3 MB]
Get: 256 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 257 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB]
Get: 258 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [241 kB]
Get: 259 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-2+b1 [107 kB]
Get: 260 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB]
Get: 261 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB]
Get: 262 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB]
Get: 263 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB]
Get: 264 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b2 [9076 B]
Get: 265 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 24.2.6-1 [7688 kB]
Get: 266 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 24.2.6-1 [42.0 kB]
Get: 267 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB]
Get: 268 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB]
Get: 269 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b2 [20.5 kB]
Get: 270 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b3 [19.2 kB]
Get: 271 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB]
Get: 272 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.2.6-1 [43.6 kB]
Get: 273 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.2.6-1 [152 kB]
Get: 274 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB]
Get: 275 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB]
Get: 276 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB]
Get: 277 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB]
Get: 278 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB]
Get: 279 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB]
Get: 280 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB]
Get: 281 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB]
Get: 282 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB]
Get: 283 http://deb.debian.org/debian unstable/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b2 [25.6 kB]
Get: 284 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b2 [10.0 kB]
Get: 285 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [1922 kB]
Get: 286 http://deb.debian.org/debian unstable/main arm64 libunwind8 arm64 1.6.2-3.1 [47.7 kB]
Get: 287 http://deb.debian.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-3+b3 [55.6 kB]
Get: 288 http://deb.debian.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b2 [53.2 kB]
Get: 289 http://deb.debian.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.16-1 [195 kB]
Get: 290 http://deb.debian.org/debian unstable/main arm64 libxfont2 arm64 1:2.0.6-1+b2 [124 kB]
Get: 291 http://deb.debian.org/debian unstable/main arm64 libxkbfile1 arm64 1:1.1.0-1+b2 [72.5 kB]
Get: 292 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b1 [36.0 kB]
Get: 293 http://deb.debian.org/debian unstable/main arm64 r-cran-littler arm64 0.3.20-1+b1 [103 kB]
Get: 294 http://deb.debian.org/debian unstable/main arm64 littler all 0.3.20-1 [16.0 kB]
Get: 295 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.0-2 [730 kB]
Get: 296 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.12.7-1 [1052 B]
Get: 297 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 298 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 299 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB]
Get: 300 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.11.0-8 [908 kB]
Get: 301 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.11.0-8 [14.9 kB]
Get: 302 http://deb.debian.org/debian unstable/main arm64 python3-joblib all 1.3.2-5 [216 kB]
Get: 303 http://deb.debian.org/debian unstable/main arm64 python3-tz all 2024.1-2 [30.9 kB]
Get: 304 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-5 [3746 kB]
Get: 305 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.2.3+dfsg-5 [3096 kB]
Get: 306 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.13.1-5 [15.4 MB]
Get: 307 http://deb.debian.org/debian unstable/main arm64 python3-threadpoolctl all 3.1.0-1 [21.2 kB]
Get: 308 http://deb.debian.org/debian unstable/main arm64 python3-sklearn-lib arm64 1.4.2+dfsg-6 [3213 kB]
Get: 309 http://deb.debian.org/debian unstable/main arm64 python3-sklearn all 1.4.2+dfsg-6 [2248 kB]
Get: 310 http://deb.debian.org/debian unstable/main arm64 r-bioc-biocgenerics all 0.50.0-2 [607 kB]
Get: 311 http://deb.debian.org/debian unstable/main arm64 r-bioc-biobase arm64 2.64.0-4 [2132 kB]
Get: 312 http://deb.debian.org/debian unstable/main arm64 r-bioc-biocbaseutils all 1.6.0+dfsg-1 [38.5 kB]
Get: 313 http://deb.debian.org/debian unstable/main arm64 r-cran-lattice arm64 0.22-6-1+b1 [1417 kB]
Get: 314 http://deb.debian.org/debian unstable/main arm64 r-cran-matrix arm64 1.7-1-1 [4023 kB]
Get: 315 http://deb.debian.org/debian unstable/main arm64 r-cran-matrixstats arm64 1.4.1-1 [493 kB]
Get: 316 http://deb.debian.org/debian unstable/main arm64 r-bioc-matrixgenerics all 1.16.0-2 [423 kB]
Get: 317 http://deb.debian.org/debian unstable/main arm64 r-bioc-s4vectors arm64 0.42.1+dfsg-2 [1889 kB]
Get: 318 http://deb.debian.org/debian unstable/main arm64 r-bioc-iranges arm64 2.38.1-1 [2302 kB]
Get: 319 http://deb.debian.org/debian unstable/main arm64 r-cran-abind all 1.4-8-1 [68.1 kB]
Get: 320 http://deb.debian.org/debian unstable/main arm64 r-cran-crayon all 1.5.2-1 [165 kB]
Get: 321 http://deb.debian.org/debian unstable/main arm64 r-bioc-s4arrays arm64 1.4.1+dfsg-1 [523 kB]
Get: 322 http://deb.debian.org/debian unstable/main arm64 r-bioc-zlibbioc all 1.50.0+dfsg-2 [9876 B]
Get: 323 http://deb.debian.org/debian unstable/main arm64 r-bioc-xvector arm64 0.44.0-1 [620 kB]
Get: 324 http://deb.debian.org/debian unstable/main arm64 r-bioc-sparsearray arm64 1.4.8+dfsg-1 [1247 kB]
Get: 325 http://deb.debian.org/debian unstable/main arm64 r-bioc-delayedarray arm64 0.30.1+dfsg-1 [1847 kB]
Get: 326 http://deb.debian.org/debian unstable/main arm64 r-cran-curl arm64 5.2.3+dfsg-1 [177 kB]
Get: 327 http://deb.debian.org/debian unstable/main arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [443 kB]
Get: 328 http://deb.debian.org/debian unstable/main arm64 r-cran-mime arm64 0.12-2+b1 [36.1 kB]
Get: 329 http://deb.debian.org/debian unstable/main arm64 r-cran-sys arm64 3.4.3-1 [44.2 kB]
Get: 330 http://deb.debian.org/debian unstable/main arm64 r-cran-askpass arm64 1.2.1-1 [24.4 kB]
Get: 331 http://deb.debian.org/debian unstable/main arm64 r-cran-openssl arm64 2.2.0+dfsg-1+b1 [399 kB]
Get: 332 http://deb.debian.org/debian unstable/main arm64 r-cran-r6 all 2.5.1-1 [105 kB]
Get: 333 http://deb.debian.org/debian unstable/main arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
Get: 334 http://deb.debian.org/debian unstable/main arm64 r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB]
Get: 335 http://deb.debian.org/debian unstable/main arm64 r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB]
Get: 336 http://deb.debian.org/debian unstable/main arm64 r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3843 kB]
Get: 337 http://deb.debian.org/debian unstable/main arm64 r-bioc-genomicranges arm64 1.56.2+dfsg-1 [1843 kB]
Get: 338 http://deb.debian.org/debian unstable/main arm64 r-bioc-summarizedexperiment all 1.34.0+dfsg-1 [1102 kB]
Get: 339 http://deb.debian.org/debian unstable/main arm64 r-cran-cli arm64 3.6.3-1 [1340 kB]
Get: 340 http://deb.debian.org/debian unstable/main arm64 r-cran-generics all 0.1.3-1 [81.4 kB]
Get: 341 http://deb.debian.org/debian unstable/main arm64 r-cran-glue arm64 1.7.0-1+b1 [159 kB]
Get: 342 http://deb.debian.org/debian unstable/main arm64 r-cran-rlang arm64 1.1.4-1+b1 [1708 kB]
Get: 343 http://deb.debian.org/debian unstable/main arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
Get: 344 http://deb.debian.org/debian unstable/main arm64 r-cran-magrittr arm64 2.0.3-1+b1 [203 kB]
Get: 345 http://deb.debian.org/debian unstable/main arm64 r-cran-fansi arm64 1.0.5-1+b1 [626 kB]
Get: 346 http://deb.debian.org/debian unstable/main arm64 r-cran-utf8 arm64 1.2.4-1+b1 [133 kB]
Get: 347 http://deb.debian.org/debian unstable/main arm64 r-cran-vctrs arm64 0.6.5-1+b1 [1378 kB]
Get: 348 http://deb.debian.org/debian unstable/main arm64 r-cran-pillar all 1.9.0+dfsg-1 [463 kB]
Get: 349 http://deb.debian.org/debian unstable/main arm64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get: 350 http://deb.debian.org/debian unstable/main arm64 r-cran-tibble arm64 3.2.1+dfsg-2+b1 [425 kB]
Get: 351 http://deb.debian.org/debian unstable/main arm64 r-cran-withr all 3.0.2+dfsg-1 [226 kB]
Get: 352 http://deb.debian.org/debian unstable/main arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [223 kB]
Get: 353 http://deb.debian.org/debian unstable/main arm64 r-cran-dplyr arm64 1.1.4-2 [1542 kB]
Get: 354 http://deb.debian.org/debian unstable/main arm64 r-cran-purrr arm64 1.0.2-1+b1 [518 kB]
Get: 355 http://deb.debian.org/debian unstable/main arm64 r-cran-stringi arm64 1.8.4-1 [872 kB]
Get: 356 http://deb.debian.org/debian unstable/main arm64 r-cran-stringr all 1.5.1-1 [296 kB]
Get: 357 http://deb.debian.org/debian unstable/main arm64 r-cran-cpp11 all 0.5.0-1 [213 kB]
Get: 358 http://deb.debian.org/debian unstable/main arm64 r-cran-tidyr arm64 1.3.1-1+b1 [1158 kB]
Get: 359 http://deb.debian.org/debian unstable/main arm64 r-bioc-multiassayexperiment all 1.30.3+dfsg-2 [1089 kB]
Get: 360 http://deb.debian.org/debian unstable/main arm64 r-bioc-rhdf5lib arm64 1.26.0+dfsg-1 [104 kB]
Get: 361 http://deb.debian.org/debian unstable/main arm64 r-bioc-rhdf5filters arm64 1.16.0+dfsg-1 [137 kB]
Get: 362 http://deb.debian.org/debian unstable/main arm64 r-bioc-rhdf5 arm64 2.48.0+dfsg-3 [852 kB]
Get: 363 http://deb.debian.org/debian unstable/main arm64 r-cran-beeswarm arm64 0.4.0-1+b2 [82.7 kB]
Get: 364 http://deb.debian.org/debian unstable/main arm64 r-cran-codetools all 0.2-20-1 [91.1 kB]
Get: 365 http://deb.debian.org/debian unstable/main arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1713 kB]
Get: 366 http://deb.debian.org/debian unstable/main arm64 r-cran-corrplot all 0.94-1 [134 kB]
Get: 367 http://deb.debian.org/debian unstable/main arm64 r-cran-gtable all 0.3.6+dfsg-1 [228 kB]
Get: 368 http://deb.debian.org/debian unstable/main arm64 r-cran-isoband arm64 0.2.7-1+b1 [1614 kB]
Get: 369 http://deb.debian.org/debian unstable/main arm64 r-cran-mass arm64 7.3-61-1+b1 [1112 kB]
Get: 370 http://deb.debian.org/debian unstable/main arm64 r-cran-nlme arm64 3.1.166-1 [2326 kB]
Get: 371 http://deb.debian.org/debian unstable/main arm64 r-cran-mgcv arm64 1.9-1-1+b1 [3218 kB]
Get: 372 http://deb.debian.org/debian unstable/main arm64 r-cran-farver arm64 2.1.2-1+b1 [1397 kB]
Get: 373 http://deb.debian.org/debian unstable/main arm64 r-cran-labeling all 0.4.3-1 [62.4 kB]
Get: 374 http://deb.debian.org/debian unstable/main arm64 r-cran-munsell all 0.5.1-1 [237 kB]
Get: 375 http://deb.debian.org/debian unstable/main arm64 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB]
Get: 376 http://deb.debian.org/debian unstable/main arm64 r-cran-viridislite all 0.4.2-2 [1299 kB]
Get: 377 http://deb.debian.org/debian unstable/main arm64 r-cran-scales all 1.3.0-1 [677 kB]
Get: 378 http://deb.debian.org/debian unstable/main arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3933 kB]
Get: 379 http://deb.debian.org/debian unstable/main arm64 r-cran-cowplot all 1.1.3+dfsg-1 [638 kB]
Get: 380 http://deb.debian.org/debian unstable/main arm64 r-cran-iterators all 1.0.14-1 [337 kB]
Get: 381 http://deb.debian.org/debian unstable/main arm64 r-cran-foreach all 1.5.2-1 [122 kB]
Get: 382 http://deb.debian.org/debian unstable/main arm64 r-cran-doparallel all 1.0.17-1 [188 kB]
Get: 383 http://deb.debian.org/debian unstable/main arm64 r-cran-ellipsis arm64 0.3.2-2+b1 [36.1 kB]
Get: 384 http://deb.debian.org/debian unstable/main arm64 r-cran-forcats all 1.0.0-1 [413 kB]
Get: 385 http://deb.debian.org/debian unstable/main arm64 r-cran-patchwork all 1.3.0-1 [3407 kB]
Get: 386 http://deb.debian.org/debian unstable/main arm64 r-cran-ggstats all 0.7.0-1 [1107 kB]
Get: 387 http://deb.debian.org/debian unstable/main arm64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB]
Get: 388 http://deb.debian.org/debian unstable/main arm64 r-cran-rcpp arm64 1.0.13-1-1 [2057 kB]
Get: 389 http://deb.debian.org/debian unstable/main arm64 r-cran-plyr arm64 1.8.9-1+b1 [791 kB]
Get: 390 http://deb.debian.org/debian unstable/main arm64 r-cran-hms all 1.1.3-1 [104 kB]
Get: 391 http://deb.debian.org/debian unstable/main arm64 r-cran-prettyunits all 1.2.0-1 [162 kB]
Get: 392 http://deb.debian.org/debian unstable/main arm64 r-cran-progress all 1.2.3-1 [93.0 kB]
Get: 393 http://deb.debian.org/debian unstable/main arm64 r-cran-ggally all 2.2.1-1 [2022 kB]
Get: 394 http://deb.debian.org/debian unstable/main arm64 r-cran-vipor all 0.4.7-1 [4509 kB]
Get: 395 http://deb.debian.org/debian unstable/main arm64 r-cran-ggbeeswarm all 0.7.2-1 [1738 kB]
Get: 396 http://deb.debian.org/debian unstable/main arm64 r-cran-ggrepel arm64 0.9.5-2+b1 [259 kB]
Get: 397 http://deb.debian.org/debian unstable/main arm64 r-cran-rprojroot all 2.0.4-1 [124 kB]
Get: 398 http://deb.debian.org/debian unstable/main arm64 r-cran-here all 1.0.1-2 [48.7 kB]
Get: 399 http://deb.debian.org/debian unstable/main arm64 r-cran-pheatmap all 1.0.12-2 [77.9 kB]
Get: 400 http://deb.debian.org/debian unstable/main arm64 r-cran-png arm64 0.1-8-1+b2 [41.3 kB]
Get: 401 http://deb.debian.org/debian unstable/main arm64 r-cran-rappdirs arm64 0.3.3-1+b1 [49.3 kB]
Get: 402 http://deb.debian.org/debian unstable/main arm64 r-cran-rcpptoml arm64 0.2.2+dfsg-1+b1 [105 kB]
Get: 403 http://deb.debian.org/debian unstable/main arm64 r-cran-reshape2 arm64 1.4.4-2+b1 [115 kB]
Get: 404 http://deb.debian.org/debian unstable/main arm64 r-cran-reticulate arm64 1.39.0+dfsg-1 [1489 kB]
Get: 405 http://deb.debian.org/debian unstable/main arm64 x11-xkb-utils arm64 7.7+9 [149 kB]
Get: 406 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB]
Get: 407 http://deb.debian.org/debian unstable/main arm64 xserver-common all 2:21.1.14-2 [2397 kB]
Get: 408 http://deb.debian.org/debian unstable/main arm64 xvfb arm64 2:21.1.14-2 [3110 kB]
Fetched 296 MB in 5s (62.3 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up python3-minimal (3.12.7-1) ...
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Setting up libxdmcp6:arm64 (1:1.1.2-3+b2) ...
Setting up libkeyutils1:arm64 (1.6.3-4) ...
Setting up libxcb1:arm64 (1.17.0-2+b1) ...
Setting up libicu72:arm64 (72.1-5+b1) ...
Setting up libxcb-xfixes0:arm64 (1.17.0-2+b1) ...
Setting up libzstd-dev:arm64 (1.5.6+dfsg-1+b1) ...
Setting up liblerc4:arm64 (4.0.0+ds-5) ...
Setting up bsdextrautils (2.40.2-11) ...
Setting up hdf5-helpers (1.10.10+repack-4) ...
Setting up libdynaloader-functions-perl (0.004-1) ...
Setting up libdatrie1:arm64 (0.2.13-3+b1) ...
Setting up libmagic-mgc (1:5.45-3+b1) ...
Setting up libxcb-render0:arm64 (1.17.0-2+b1) ...
Setting up libclone-perl:arm64 (0.47-1+b1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libsub-identify-perl (0.14-3+b3) ...
Setting up libglvnd0:arm64 (1.7.0-1+b2) ...
Setting up libtirpc-common (1.3.4+ds-1.3) ...
Setting up libxcb-glx0:arm64 (1.17.0-2+b1) ...
Setting up unzip (6.0-28+b1) ...
Setting up libdebhelper-perl (13.20) ...
Setting up libbrotli1:arm64 (1.1.0-2+b6) ...
Setting up libedit2:arm64 (3.1-20240808-1) ...
Setting up liblwp-mediatypes-perl (6.04-2) ...
Setting up libmagic1t64:arm64 (1:5.45-3+b1) ...
Setting up x11-common (1:7.7+23.1) ...
invoke-rc.d: could not determine current runlevel
Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
Setting up libtry-tiny-perl (0.32-1) ...
Setting up libsensors-config (1:3.6.0-10) ...
Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ...
Setting up libnghttp2-14:arm64 (1.64.0-1) ...
Setting up libdeflate0:arm64 (1.22-1) ...
Setting up gettext-base (0.22.5-2) ...
Setting up m4 (1.4.19-4) ...
Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up xkb-data (2.42-1) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up libxcb-shm0:arm64 (1.17.0-2+b1) ...
Setting up libcom-err2:arm64 (1.47.1-1+b1) ...
Setting up file (1:5.45-3+b1) ...
Setting up libunwind8:arm64 (1.6.2-3.1) ...
Setting up libjbig0:arm64 (2.1-6.1+b2) ...
Setting up libpcre2-16-0:arm64 (10.42-4+b2) ...
Setting up libaec0:arm64 (1.1.3-1+b1) ...
Setting up libsub-install-perl (0.929-1) ...
Setting up libelf1t64:arm64 (0.192-4) ...
Setting up libpsl-dev:arm64 (0.21.2-1.1+b1) ...
Setting up libsnappy1v5:arm64 (1.2.1-1+b1) ...
Setting up libkrb5support0:arm64 (1.21.3-3) ...
Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ...
Setting up tzdata (2024b-3) ...

Current default time zone: 'Etc/UTC'
Local time is now:      Wed Dec 17 23:55:55 UTC 2025.
Universal Time is now:  Wed Dec 17 23:55:55 UTC 2025.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up libxcb-present0:arm64 (1.17.0-2+b1) ...
Setting up libpython3.13-minimal:arm64 (3.13.0-2) ...
Setting up zip (3.0-14+b1) ...
Setting up libfontenc1:arm64 (1:1.1.8-1+b1) ...
Setting up libpackage-stash-xs-perl:arm64 (0.30-1+b4) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:arm64 (4.13.3-1) ...
Setting up libpcre2-32-0:arm64 (10.42-4+b2) ...
Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
No schema files found: doing nothing.
Setting up libblas3:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
Setting up libunbound8:arm64 (1.22.0-1) ...
Setting up libpkgconf3:arm64 (1.8.1-4) ...
Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-2+b2) ...
Setting up libalgorithm-c3-perl (0.11-2) ...
Setting up libjpeg62-turbo:arm64 (1:2.1.5-3+b1) ...
Setting up libswitch-perl (2.17-3) ...
Setting up libgnutls-dane0t64:arm64 (3.8.8-2) ...
Setting up libx11-data (2:1.8.10-2) ...
Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libxcb-sync1:arm64 (1.17.0-2+b1) ...
Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libncurses6:arm64 (6.5-2+b1) ...
Setting up liblzf1:arm64 (3.6-4+b2) ...
Setting up libfribidi0:arm64 (1.0.15-1) ...
Setting up libproc2-0:arm64 (2:4.0.4-6) ...
Setting up comerr-dev:arm64 (2.1-1.47.1-1+b1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libssl-dev:arm64 (3.3.2-2) ...
Setting up libpng16-16t64:arm64 (1.6.44-2) ...
Setting up libvariable-magic-perl (0.64-1+b1) ...
Setting up libio-html-perl (1.004-3) ...
Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ...
Setting up autopoint (0.22.5-2) ...
Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b2) ...
Setting up icu-devtools (72.1-5+b1) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up pkgconf-bin (1.8.1-4) ...
Setting up libsensors5:arm64 (1:3.6.0-10+b1) ...
Setting up libk5crypto3:arm64 (1.21.3-3) ...
Setting up libidn2-dev:arm64 (2.3.7-2+b1) ...
Setting up libglapi-mesa:arm64 (24.2.6-1) ...
Setting up libparams-util-perl (1.102-3+b1) ...
Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ...
Setting up libgfortran5:arm64 (14.2.0-8) ...
Setting up libvulkan1:arm64 (1.3.296.0-1) ...
Setting up autoconf (2.72-3) ...
Setting up libnghttp3-9:arm64 (1.4.0-1+b1) ...
Setting up libsub-exporter-progressive-perl (0.001013-3) ...
Setting up libwebp7:arm64 (1.4.0-0.1+b1) ...
Setting up libtimedate-perl (2.3300-2) ...
Setting up liblzma-dev:arm64 (5.6.3-1+b1) ...
Setting up libxcb-dri2-0:arm64 (1.17.0-2+b1) ...
Setting up libsub-name-perl:arm64 (0.27-1+b3) ...
Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up libpcre2-posix3:arm64 (10.42-4+b2) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up libxshmfence1:arm64 (1.3-1+b2) ...
Setting up libtiff6:arm64 (4.5.1+git230720-5) ...
Setting up libxcb-randr0:arm64 (1.17.0-2+b1) ...
Setting up libuchardet0:arm64 (0.0.8-1+b2) ...
Setting up procps (2:4.0.4-6) ...
Setting up libblosc1:arm64 (1.21.5+ds-1+b2) ...
Setting up python3.13-minimal (3.13.0-2) ...
Setting up libx11-6:arm64 (2:1.8.10-2) ...
Setting up libthai-data (0.1.29-2) ...
Setting up libdevel-globaldestruction-perl (0.14-4) ...
Setting up netbase (6.4) ...
Setting up libngtcp2-16:arm64 (1.6.0-1) ...
Setting up libdevel-stacktrace-perl (2.0500-1) ...
Setting up libkrb5-3:arm64 (1.21.3-3) ...
Setting up libxkbfile1:arm64 (1:1.1.0-1+b2) ...
Setting up libssh2-1t64:arm64 (1.11.1-1) ...
Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ...
Setting up openssl (3.3.2-2) ...
Setting up libdeflate-dev:arm64 (1.22-1) ...
Setting up libdrm-common (2.4.123-1) ...
Setting up readline-common (8.2-5) ...
Setting up libicu-dev:arm64 (72.1-5+b1) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up liburi-perl (5.30-1) ...
Setting up libxmuu1:arm64 (2:1.1.3-3+b3) ...
Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ...
Setting up libngtcp2-crypto-gnutls8:arm64 (1.6.0-1) ...
Setting up libp11-kit-dev:arm64 (0.25.5-2+b1) ...
Setting up libblas-dev:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
Setting up libsz2:arm64 (1.1.3-1+b1) ...
Setting up dctrl-tools (2.24-3+b1) ...
Setting up libbz2-dev:arm64 (1.0.8-6) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libgfortran-14-dev:arm64 (14.2.0-8) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libxcb-dri3-0:arm64 (1.17.0-2+b1) ...
Setting up libllvm19:arm64 (1:19.1.3-2) ...
Setting up libx11-xcb1:arm64 (2:1.8.10-2) ...
Setting up libice6:arm64 (2:1.1.1-1) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up liblapack3:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
Setting up libncurses-dev:arm64 (6.5-2+b1) ...
Setting up gettext (0.22.5-2) ...
Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-2+b2) ...
Setting up libxpm4:arm64 (1:3.5.17-1+b2) ...
Setting up libpcre2-dev:arm64 (10.42-4+b2) ...
Setting up nettle-dev:arm64 (3.10-1+b1) ...
Setting up libxrender1:arm64 (1:0.9.10-1.1+b2) ...
Setting up libtool (2.4.7-8) ...
Setting up fontconfig-config (2.15.0-1.1+b1) ...
Setting up libpng-dev:arm64 (1.6.44-2) ...
Setting up libaec-dev:arm64 (1.1.3-1+b1) ...
Setting up libjpeg-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b2) ...
Setting up libclass-c3-perl (0.35-2) ...
Setting up libdevel-callchecker-perl:arm64 (0.009-1+b1) ...
Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ...
Setting up pkgconf:arm64 (1.8.1-4) ...
Setting up libxxf86vm1:arm64 (1:1.1.4-1+b3) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up libthai0:arm64 (0.1.29-2+b1) ...
Setting up ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ...
Setting up libxfixes3:arm64 (1:6.0.0-2+b2) ...
Setting up libldap-dev:arm64 (2.5.18+dfsg-3+b1) ...
Setting up liblapack-dev:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ...
Setting up libxrandr2:arm64 (2:1.5.4-1+b1) ...
Setting up libdata-optlist-perl (0.114-1) ...
Setting up ucf (3.0043+nmu1) ...
Setting up libssh2-1-dev:arm64 (1.11.1-1) ...
Setting up libreadline8t64:arm64 (8.2-5) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libdrm2:arm64 (2.4.123-1) ...
Setting up xauth (1:1.1.2-1+b1) ...
Setting up groff-base (1.23.0-5) ...
Setting up gfortran-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libharfbuzz0b:arm64 (10.0.1-1) ...
Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libxss1:arm64 (1:1.2.3-1+b2) ...
Setting up libfontconfig1:arm64 (2.15.0-1.1+b1) ...
Setting up libmro-compat-perl (0.15-2) ...
Setting up gfortran-14 (14.2.0-8) ...
Setting up libsm6:arm64 (2:1.2.4-1) ...
Setting up libxfont2:arm64 (1:2.0.6-1+b2) ...
Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ...
Setting up libsub-exporter-perl (0.990-1) ...
Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b2) ...
Setting up libhttp-message-perl (7.00-2) ...
Setting up libeval-closure-perl (0.14-3) ...
Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ...
Setting up libgnutls28-dev:arm64 (3.8.8-2) ...
Setting up libpaper1:arm64 (1.1.29+b2) ...

Creating config file /etc/papersize with new version
Setting up libnghttp2-dev:arm64 (1.64.0-1) ...
Setting up fontconfig (2.15.0-1.1+b1) ...
Regenerating fonts cache... done.
Setting up libxft2:arm64 (2.3.6-1+b2) ...
Setting up libcurl4t64:arm64 (8.11.0-1) ...
Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ...
Setting up python3.13 (3.13.0-2) ...
Setting up libdrm-radeon1:arm64 (2.4.123-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libtk8.6:arm64 (8.6.15-1) ...
Setting up libparams-classify-perl:arm64 (0.015-2+b4) ...
Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libcurl3t64-gnutls:arm64 (8.11.0-1) ...
Setting up libwww-curl-perl:arm64 (4.17-11) ...
Setting up libpaper-utils (1.1.29+b2) ...
Setting up libreadline-dev:arm64 (8.2-5) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:14.2.0-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libcairo2:arm64 (1.18.2-2) ...
Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3+b1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libgssrpc4t64:arm64 (1.21.3-3) ...
Setting up libxt6t64:arm64 (1:1.2.1-1.2+b1) ...
Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libdist-checkconflicts-perl (0.11-2) ...
Setting up libnsl2:arm64 (1.3.0-3+b3) ...
Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4) ...
Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libkadm5clnt-mit12:arm64 (1.21.3-3) ...
Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ...
Setting up mesa-libgallium:arm64 (24.2.6-1) ...
Setting up libxmu6:arm64 (2:1.1.3-3+b3) ...
Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ...
Setting up libkdb5-10t64:arm64 (1.21.3-3) ...
Setting up libgbm1:arm64 (24.2.6-1) ...
Setting up libmodule-implementation-perl (0.09-2) ...
Setting up libpackage-stash-perl (0.40-1) ...
Setting up python3.12 (3.12.7-3) ...
Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ...
Setting up libgl1-mesa-dri:arm64 (24.2.6-1) ...
Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ...
Setting up debhelper (13.20) ...
Setting up libmodule-runtime-conflicts-perl (0.003-2) ...
Setting up libxaw7:arm64 (2:1.0.16-1) ...
Setting up libclass-load-perl (0.25-2) ...
Setting up r-base-core (4.4.2-1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.5.2-1) ...
Setting up r-cran-labeling (0.4.3-1) ...
Setting up r-cran-lattice (0.22-6-1+b1) ...
Setting up r-cran-nlme (3.1.166-1) ...
Setting up r-cran-farver (2.1.2-1+b1) ...
Setting up libpackage-deprecationmanager-perl (0.18-1) ...
Setting up r-cran-viridislite (0.4.2-2) ...
Setting up libkadm5srv-mit12:arm64 (1.21.3-3) ...
Setting up libdevel-overloadinfo-perl (0.007-1) ...
Setting up libclass-load-xs-perl (0.10-2+b4) ...
Setting up r-cran-r6 (2.5.1-1) ...
Setting up r-cran-pkgkitten (0.2.4-1) ...
Setting up libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-4) ...
Setting up libb-hooks-endofscope-perl (0.28-1) ...
Setting up r-cran-magrittr (2.0.3-1+b1) ...
Setting up r-cran-rappdirs (0.3.3-1+b1) ...
Setting up r-bioc-genomeinfodbdata (1.2.12-1) ...
Setting up libpython3-stdlib:arm64 (3.12.7-1) ...
Setting up krb5-multidev:arm64 (1.21.3-3) ...
Setting up r-cran-littler (0.3.20-1+b1) ...
Setting up r-cran-rcpp (1.0.13-1-1) ...
Setting up r-cran-curl (5.2.3+dfsg-1) ...
Setting up r-cran-codetools (0.2-20-1) ...
Setting up r-bioc-biocgenerics (0.50.0-2) ...
Setting up r-cran-rlang (1.1.4-1+b1) ...
Setting up libglx-mesa0:arm64 (24.2.6-1) ...
Setting up r-cran-matrixstats (1.4.1-1) ...
Setting up r-base-dev (4.4.2-1) ...
Setting up littler (0.3.20-1) ...
Setting up libglx0:arm64 (1.7.0-1+b2) ...
Setting up r-bioc-matrixgenerics (1.16.0-2) ...
Setting up r-cran-sys (3.4.3-1) ...
Setting up r-cran-withr (3.0.2+dfsg-1) ...
Setting up r-cran-mime (0.12-2+b1) ...
Setting up libmoose-perl:arm64 (2.2207-1+b2) ...
Setting up r-cran-vipor (0.4.7-1) ...
Setting up r-cran-generics (0.1.3-1) ...
Setting up x11-xkb-utils (7.7+9) ...
Setting up r-cran-beeswarm (0.4.0-1+b2) ...
Setting up r-cran-iterators (1.0.14-1) ...
Setting up r-cran-abind (1.4-8-1) ...
Setting up r-cran-foreach (1.5.2-1) ...
Setting up r-cran-prettyunits (1.2.0-1) ...
Setting up r-cran-fansi (1.0.5-1+b1) ...
Setting up r-cran-mass (7.3-61-1+b1) ...
Setting up libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-4) ...
Setting up python3 (3.12.7-1) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up r-cran-glue (1.7.0-1+b1) ...
Setting up r-cran-cli (3.6.3-1) ...
Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
Setting up r-cran-rprojroot (2.0.4-1) ...
Setting up python3-tz (2024.1-2) ...
Setting up r-bioc-zlibbioc (1.50.0+dfsg-2) ...
Setting up r-cran-askpass (1.2.1-1) ...
Setting up r-cran-png (0.1-8-1+b2) ...
Setting up r-bioc-biobase (2.64.0-4) ...
Setting up libkrb5-dev:arm64 (1.21.3-3) ...
Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
Setting up r-cran-corrplot (0.94-1) ...
Setting up r-cran-pkgconfig (2.0.3-2) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up r-cran-utf8 (1.2.4-1+b1) ...
Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
Setting up libgl1:arm64 (1.7.0-1+b2) ...
Setting up r-cran-stringi (1.8.4-1) ...
Setting up libcurl4-openssl-dev:arm64 (8.11.0-1) ...
Setting up r-cran-cpp11 (0.5.0-1) ...
Setting up r-cran-plyr (1.8.9-1+b1) ...
Setting up r-cran-rcolorbrewer (1.1-3-1) ...
Setting up r-bioc-s4vectors (0.42.1+dfsg-2) ...
Setting up r-cran-isoband (0.2.7-1+b1) ...
Setting up libhdf5-dev (1.10.10+repack-4) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up r-cran-gtable (0.3.6+dfsg-1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up r-cran-matrix (1.7-1-1) ...
Setting up r-cran-here (1.0.1-2) ...
Setting up r-cran-doparallel (1.0.17-1) ...
Setting up r-cran-rcpptoml (0.2.2+dfsg-1+b1) ...
Setting up r-cran-mgcv (1.9-1-1+b1) ...
Setting up r-bioc-biocbaseutils (1.6.0+dfsg-1) ...
Setting up python3-dateutil (2.9.0-3) ...
Setting up r-bioc-iranges (2.38.1-1) ...
Setting up xserver-common (2:21.1.14-2) ...
Setting up r-cran-reticulate (1.39.0+dfsg-1) ...
Setting up r-cran-vctrs (0.6.5-1+b1) ...
Setting up r-cran-pillar (1.9.0+dfsg-1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up r-cran-ellipsis (0.3.2-2+b1) ...
Setting up r-cran-openssl (2.2.0+dfsg-1+b1) ...
Setting up r-bioc-s4arrays (1.4.1+dfsg-1) ...
Setting up r-cran-stringr (1.5.1-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libwww-curl-simple-perl (0.100191-3) ...
Setting up xvfb (2:21.1.14-2) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up python3-threadpoolctl (3.1.0-1) ...
Setting up r-cran-munsell (0.5.1-1) ...
Setting up r-cran-tibble (3.2.1+dfsg-2+b1) ...
Setting up r-bioc-rhdf5lib (1.26.0+dfsg-1) ...
Setting up python3-all (3.12.7-1) ...
Setting up r-bioc-rhdf5filters (1.16.0+dfsg-1) ...
Setting up r-cran-forcats (1.0.0-1) ...
Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
Setting up r-cran-reshape2 (1.4.4-2+b1) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up r-cran-httr (1.4.7+dfsg-1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up r-cran-hms (1.1.3-1) ...
Setting up r-cran-scales (1.3.0-1) ...
Setting up r-cran-purrr (1.0.2-1+b1) ...
Setting up r-bioc-xvector (0.44.0-1) ...
Setting up r-cran-dplyr (1.1.4-2) ...
Setting up dh-r (20231212) ...
Setting up r-cran-progress (1.2.3-1) ...
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up r-cran-pheatmap (1.0.12-2) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up python3-joblib (1.3.2-5) ...
Setting up r-bioc-ucsc.utils (1.0.0+ds-2) ...
Setting up r-bioc-sparsearray (1.4.8+dfsg-1) ...
Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
Setting up r-bioc-rhdf5 (2.48.0+dfsg-3) ...
Setting up r-bioc-genomeinfodb (1.40.1+dfsg-1) ...
Setting up r-cran-ggrepel (0.9.5-2+b1) ...
Setting up r-cran-tidyr (1.3.1-1+b1) ...
Setting up python3-numpy (1:1.26.4+ds-11) ...
Setting up r-cran-ggbeeswarm (0.7.2-1) ...
Setting up r-bioc-delayedarray (0.30.1+dfsg-1) ...
Setting up dh-python (6.20241024) ...
Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
Setting up r-cran-patchwork (1.3.0-1) ...
Setting up r-cran-ggstats (0.7.0-1) ...
Setting up python3-scipy (1.13.1-5) ...
Setting up r-bioc-genomicranges (1.56.2+dfsg-1) ...
Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-5) ...
Setting up r-cran-ggally (2.2.1-1) ...
Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-6) ...
Setting up python3-h5py-serial (3.11.0-8) ...
Setting up python3-pandas (2.2.3+dfsg-5) ...
Setting up python3-h5py (3.11.0-8) ...
Setting up python3-sklearn (1.4.2+dfsg-6) ...
Setting up r-bioc-summarizedexperiment (1.34.0+dfsg-1) ...
Setting up r-bioc-multiassayexperiment (1.30.3+dfsg-2) ...
Processing triggers for libc-bin (2.40-3) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/A99_set_merged_usr starting
Not re-configuring usrmerge for unstable
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../r-bioc-mofa_1.6.1+dfsg-13_source.changes
dpkg-buildpackage: info: source package r-bioc-mofa
dpkg-buildpackage: info: source version 1.6.1+dfsg-13
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg'
dh_auto_clean
I: pybuild base:311: python3.13 setup.py clean 
running clean
removing '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
I: pybuild base:311: python3.12 setup.py clean 
running clean
removing '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
rm -rf debian/python3-mofa.substvars mofapy.egg-info/
make[1]: Leaving directory '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --buildsystem pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config 
running config
I: pybuild base:311: python3.12 setup.py config 
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py build 
running build
running build_py
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy
copying mofapy/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run
copying mofapy/run/python_template.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run
copying mofapy/run/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/variational_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/utils.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/updates.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/simulate.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/nongaussian_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/multiview_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/mixed_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/init_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/entry_point.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/distributions.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/build_model.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
copying mofapy/core/BayesNet.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core
I: pybuild base:311: /usr/bin/python3 setup.py build 
running build
running build_py
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy
copying mofapy/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run
copying mofapy/run/python_template.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run
copying mofapy/run/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/variational_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/utils.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/updates.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/simulate.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/nongaussian_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/multiview_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/mixed_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/init_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/entry_point.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/distributions.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/build_model.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
copying mofapy/core/BayesNet.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core
   dh_auto_test -O--buildsystem=pybuild
I: pybuild base:311: cd /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build; python3.13 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

NO TESTS RAN
I: pybuild base:311: cd /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build; python3.12 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

NO TESTS RAN
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=pybuild
   dh_prep -O--buildsystem=pybuild
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg'
dh_auto_install -O--buildsystem=R --sourcedirectory=/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg
I: R Package: MOFA Version: 1.6.1
I: Building using R version 4.4.2-1
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Sun, 18 Aug 2024 11:42:09 +0200
	mkdir -p /build/reproducible-path/r-bioc-mofa-1.6.1\+dfsg/debian/tmp/usr/lib/R/site-library
	xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac +extension GLX +render -noreset" R CMD INSTALL -l /build/reproducible-path/r-bioc-mofa-1.6.1\+dfsg/debian/tmp/usr/lib/R/site-library --clean . "--built-timestamp='Sun, 18 Aug 2024 11:42:09 +0200'"
* installing *source* package 'MOFA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in fun(libname, pkgname) :
  Please use MOFA2 instead of MOFA.  Package 'MOFA' is deprecated and
  will be removed from Bioconductor version 3.13.
** testing if installed package can be loaded from final location
Warning in fun(libname, pkgname) :
  Please use MOFA2 instead of MOFA.  Package 'MOFA' is deprecated and
  will be removed from Bioconductor version 3.13.
** testing if installed package keeps a record of temporary installation path
* DONE (MOFA)
	rm -f /build/reproducible-path/r-bioc-mofa-1.6.1\+dfsg/debian/tmp/usr/lib/R/site-library/MOFA/LICENSE
W: Ignoring specified R dependency: R (>= 3.5)
I: Using r-cran-knitr for Suggests:knitr
W: Cannot find a debian package for Suggests:MOFAdata
I: Using r-bioc-rhdf5 for Imports:rhdf5
I: Using r-cran-dplyr for Imports:dplyr
I: Using r-cran-reshape2 for Imports:reshape2
I: Using r-cran-pheatmap for Imports:pheatmap
I: Using r-cran-corrplot for Imports:corrplot
I: Using r-cran-ggplot2 for Imports:ggplot2
I: Using r-cran-ggbeeswarm for Imports:ggbeeswarm
I: Using r-cran-scales for Imports:scales
I: Using r-cran-ggally for Imports:GGally
I: Using r-cran-rcolorbrewer by changing version to  for Imports:RColorBrewer
I: Using r-cran-cowplot for Imports:cowplot
I: Using r-cran-ggrepel for Imports:ggrepel
I: Using r-bioc-multiassayexperiment for Imports:MultiAssayExperiment
I: Using r-bioc-biobase for Imports:Biobase
I: Using r-cran-doparallel for Imports:doParallel
I: Using r-cran-foreach for Imports:foreach
I: Using r-cran-reticulate for Imports:reticulate
I: BioConductor API version: r-api-bioc-3.19
I: Use r-bioc-mofa as Debian binary package for variables substitution
find /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian -name "*.Rmd" | xargs -r chmod -x
mv debian/tmp tmp-install
dh_auto_install
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running install_lib
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/__pycache__
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/BayesNet.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/build_model.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/distributions.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/entry_point.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/init_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/mixed_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/multiview_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/nongaussian_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/simulate.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/updates.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/utils.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/core/variational_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/run/python_template.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.13_mofapy/build/mofapy/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/BayesNet.py to BayesNet.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/build_model.py to build_model.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/distributions.py to distributions.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/entry_point.py to entry_point.cpython-313.pyc
/usr/lib/python3.13/dist-packages/mofapy/core/entry_point.py:41: SyntaxWarning: invalid escape sequence '\/'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/init_nodes.py to init_nodes.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/mixed_nodes.py to mixed_nodes.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/multiview_nodes.py to multiview_nodes.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/nodes.py to nodes.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/nongaussian_nodes.py to nongaussian_nodes.cpython-313.pyc
/usr/lib/python3.13/dist-packages/mofapy/core/nongaussian_nodes.py:144: SyntaxWarning: invalid escape sequence '\p'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/simulate.py to simulate.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/updates.py to updates.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/utils.py to utils.cpython-313.pyc
/usr/lib/python3.13/dist-packages/mofapy/core/utils.py:178: SyntaxWarning: invalid escape sequence '\m'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/core/variational_nodes.py to variational_nodes.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/run/python_template.py to python_template.cpython-313.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy/__init__.py to __init__.cpython-313.pyc
running install_egg_info
running egg_info
creating mofapy.egg-info
writing mofapy.egg-info/PKG-INFO
writing dependency_links to mofapy.egg-info/dependency_links.txt
writing requirements to mofapy.egg-info/requires.txt
writing top-level names to mofapy.egg-info/top_level.txt
writing manifest file 'mofapy.egg-info/SOURCES.txt'
reading manifest file 'mofapy.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'mofapy.egg-info/SOURCES.txt'
Copying mofapy.egg-info to /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.13/dist-packages/mofapy-1.2.egg-info
Skipping SOURCES.txt
running install_scripts
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running install_lib
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/__pycache__
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/BayesNet.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/build_model.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/distributions.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/entry_point.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/init_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/mixed_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/multiview_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/nongaussian_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/simulate.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/updates.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/utils.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/core/variational_nodes.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run
creating /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run/__pycache__
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/run/python_template.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run
copying /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/.pybuild/cpython3_3.12_mofapy/build/mofapy/__init__.py -> /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/BayesNet.py to BayesNet.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/build_model.py to build_model.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/distributions.py to distributions.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/entry_point.py to entry_point.cpython-312.pyc
/usr/lib/python3.12/dist-packages/mofapy/core/entry_point.py:41: SyntaxWarning: invalid escape sequence '\/'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/init_nodes.py to init_nodes.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/mixed_nodes.py to mixed_nodes.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/multiview_nodes.py to multiview_nodes.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/nodes.py to nodes.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/nongaussian_nodes.py to nongaussian_nodes.cpython-312.pyc
/usr/lib/python3.12/dist-packages/mofapy/core/nongaussian_nodes.py:144: SyntaxWarning: invalid escape sequence '\p'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/simulate.py to simulate.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/updates.py to updates.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/utils.py to utils.cpython-312.pyc
/usr/lib/python3.12/dist-packages/mofapy/core/utils.py:178: SyntaxWarning: invalid escape sequence '\m'
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/core/variational_nodes.py to variational_nodes.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/run/python_template.py to python_template.cpython-312.pyc
byte-compiling /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy/__init__.py to __init__.cpython-312.pyc
running install_egg_info
running egg_info
writing mofapy.egg-info/PKG-INFO
writing dependency_links to mofapy.egg-info/dependency_links.txt
writing requirements to mofapy.egg-info/requires.txt
writing top-level names to mofapy.egg-info/top_level.txt
reading manifest file 'mofapy.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'mofapy.egg-info/SOURCES.txt'
Copying mofapy.egg-info to /build/reproducible-path/r-bioc-mofa-1.6.1+dfsg/debian/python3-mofapy/usr/lib/python3.12/dist-packages/mofapy-1.2.egg-info
Skipping SOURCES.txt
running install_scripts
make[1]: Leaving directory '/build/reproducible-path/r-bioc-mofa-1.6.1+dfsg'
   dh_install -O--buildsystem=pybuild
   dh_installdocs -O--buildsystem=pybuild
   dh_installchangelogs -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
I: dh_python3 pydist:316: Cannot find package that provides sklearn. Please add package that provides it to Build-Depends or add "sklearn python3-sklearn" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info.
   dh_installsystemduser -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   dh_compress -O--buildsystem=pybuild
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
dpkg-gencontrol: warning: Depends field of package r-bioc-mofa: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'r-bioc-mofa' in '../r-bioc-mofa_1.6.1+dfsg-13_all.deb'.
dpkg-deb: building package 'python3-mofapy' in '../python3-mofapy_1.6.1+dfsg-13_all.deb'.
 dpkg-genbuildinfo --build=binary -O../r-bioc-mofa_1.6.1+dfsg-13_arm64.buildinfo
 dpkg-genchanges --build=binary -O../r-bioc-mofa_1.6.1+dfsg-13_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/1602220/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/1602220 and its subdirectories
I: Current time: Thu Dec 18 13:57:29 +14 2025
I: pbuilder-time-stamp: 1766015849