I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 15 07:53:21 +14 2025 I: pbuilder-time-stamp: 1765734801 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ffindex_0.9.9.9-7.dsc] I: copying [./ffindex_0.9.9.9.orig.tar.gz] I: copying [./ffindex_0.9.9.9-7.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Nov 9 10:47:08 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./ffindex_0.9.9.9-7.dsc: no acceptable signature found dpkg-source: info: extracting ffindex in ffindex-0.9.9.9 dpkg-source: info: unpacking ffindex_0.9.9.9.orig.tar.gz dpkg-source: info: unpacking ffindex_0.9.9.9-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch dpkg-source: info: applying basename.patch dpkg-source: info: applying cross.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 14 17:53 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=c2a4141f8c004224a96b46452d8fe659 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1266315 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.z9WHS8oW/pbuilderrc_2WFy --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.z9WHS8oW/b2 --logfile b2/build.log ffindex_0.9.9.9-7.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), help2man, mpi-default-dev, mpi-default-bin, cmake, chrpath, pkgconf dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20088 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-bin; however: Package mpi-default-bin is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-aarch64-linux-gnu{a} groff-base{a} help2man{a} ibverbs-providers{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcbor0.10{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libjs-jquery{a} libjs-jquery-ui{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libllvm17t64{a} liblocale-gettext-perl{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess0{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libproc2-0{a} libpsl5t64{a} librdmacm1t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libucx0{a} libuv1t64{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} mpi-default-bin{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libldap-common libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget xauth 0 packages upgraded, 122 newly installed, 0 to remove and 0 not upgraded. Need to get 112 MB of archives. After unpacking 476 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-10 [96.5 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libfido2-1 arm64 1.15.0-1+b1 [74.3 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 21 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 openssh-client arm64 1:9.9p1-3 [928 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 chrpath arm64 0.18-1 [13.2 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.30.5-1 [2223 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.1 [630 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b5 [296 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-2 [73.1 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.30.5-1 [9403 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libgfortran-14-dev arm64 14.2.0-8 [418 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-8 [9791 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 gfortran-14 arm64 14.2.0-8 [12.2 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 help2man arm64 1.49.3+b1 [198 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libnl-3-200 arm64 3.7.0-0.3+b1 [57.0 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-200 arm64 3.7.0-0.3+b1 [167 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libibverbs1 arm64 52.0-2+b1 [58.8 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 ibverbs-providers arm64 52.0-2+b1 [321 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libllvm17t64 arm64 1:17.0.6-18 [21.3 MB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B] Get: 73 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.18-1+b1 [21.8 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libhsakmt1 arm64 6.1.2+ds-1 [56.9 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 libhsa-runtime64-1 arm64 6.1.2-2 [300 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 libamdhip64-5 arm64 5.7.1-5 [8823 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 librdmacm1t64 arm64 52.0-2+b1 [67.4 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 libfabric1 arm64 1.17.0-3.1 [480 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 libhwloc15 arm64 2.11.2-1 [141 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libnuma-dev arm64 2.0.18-1+b1 [37.8 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libltdl7 arm64 2.4.7-8 [392 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 libltdl-dev arm64 2.4.7-8 [165 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 libhwloc-dev arm64 2.11.2-1 [237 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 libpciaccess0 arm64 0.17-3+b2 [51.2 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3+b2 [24.4 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libxnvctrl0 arm64 535.171.04-1+b1 [14.1 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.3.2-1+b2 [39.3 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libhwloc-plugins arm64 2.11.2-1 [17.9 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libibumad3 arm64 52.0-2+b1 [27.1 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libibmad5 arm64 52.0-2+b1 [41.5 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libnl-3-dev arm64 3.7.0-0.3+b1 [101 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-dev arm64 3.7.0-0.3+b1 [198 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libibverbs-dev arm64 52.0-2+b1 [625 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libmunge2 arm64 0.5.15-4+b1 [19.4 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 libpmix2t64 arm64 5.0.3-2+b1 [588 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libucx0 arm64 1.17.0+ds-3 [959 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libopenmpi3t64 arm64 5.0.5-3 [1806 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 openmpi-common all 5.0.5-3 [95.0 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 libpmix-dev arm64 5.0.3-2+b1 [3930 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 openmpi-bin arm64 5.0.5-3 [159 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 libopenmpi-dev arm64 5.0.5-3 [1088 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 mpi-default-bin arm64 1.17 [2372 B] Get: 120 http://deb.debian.org/debian unstable/main arm64 mpi-default-dev arm64 1.17 [3148 B] Get: 121 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Fetched 112 MB in 2s (73.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20088 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-7+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. 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Unpacking libnghttp2-14:arm64 (1.64.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../038-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../039-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../040-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../041-libcurl4t64_8.11.0-1_arm64.deb ... Unpacking libcurl4t64:arm64 (8.11.0-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../042-libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... Selecting previously unselected package libjsoncpp26:arm64. 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Unpacking libnuma-dev:arm64 (2.0.18-1+b1) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../088-libltdl7_2.4.7-8_arm64.deb ... Unpacking libltdl7:arm64 (2.4.7-8) ... Selecting previously unselected package libltdl-dev:arm64. Preparing to unpack .../089-libltdl-dev_2.4.7-8_arm64.deb ... Unpacking libltdl-dev:arm64 (2.4.7-8) ... Selecting previously unselected package libhwloc-dev:arm64. Preparing to unpack .../090-libhwloc-dev_2.11.2-1_arm64.deb ... Unpacking libhwloc-dev:arm64 (2.11.2-1) ... Selecting previously unselected package libpciaccess0:arm64. Preparing to unpack .../091-libpciaccess0_0.17-3+b2_arm64.deb ... Unpacking libpciaccess0:arm64 (0.17-3+b2) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../092-libxau6_1%3a1.0.11-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../093-libxdmcp6_1%3a1.1.2-3+b2_arm64.deb ... 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Unpacking libucx0:arm64 (1.17.0+ds-3) ... Selecting previously unselected package libopenmpi3t64:arm64. Preparing to unpack .../111-libopenmpi3t64_5.0.5-3_arm64.deb ... Unpacking libopenmpi3t64:arm64 (5.0.5-3) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../112-openmpi-common_5.0.5-3_all.deb ... Unpacking openmpi-common (5.0.5-3) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libpmix-dev:arm64. Preparing to unpack .../114-libpmix-dev_5.0.3-2+b1_arm64.deb ... Unpacking libpmix-dev:arm64 (5.0.3-2+b1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../115-openmpi-bin_5.0.5-3_arm64.deb ... Unpacking openmpi-bin (5.0.5-3) ... Selecting previously unselected package libopenmpi-dev:arm64. 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Setting up libpciaccess0:arm64 (0.17-3+b2) ... Setting up libxau6:arm64 (1:1.0.11-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3+b2) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libxcb1:arm64 (1.17.0-2+b1) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-10) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libcbor0.10:arm64 (0.10.2-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b5) ... Setting up libedit2:arm64 (3.1-20240808-1) ... Setting up libuv1t64:arm64 (1.48.0-7) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up libibumad3:arm64 (52.0-2+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libibmad5:arm64 (52.0-2+b1) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:arm64 (4.13.3-1) ... Setting up libpkgconf3:arm64 (1.8.1-4) ... Setting up libmunge2:arm64 (0.5.15-4+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libjsoncpp26:arm64 (1.9.6-2) ... Setting up libproc2-0:arm64 (2:4.0.4-6) ... Setting up libhwloc15:arm64 (2.11.2-1) ... Setting up autopoint (0.22.5-2) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libltdl7:arm64 (2.4.7-8) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:arm64 (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libnuma1:arm64 (2.0.18-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up ocl-icd-libopencl1:arm64 (2.3.2-1+b2) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libnl-3-200:arm64 (3.7.0-0.3+b1) ... Setting up openmpi-common (5.0.5-3) ... Setting up libx11-6:arm64 (2:1.8.10-2) ... Setting up cmake-data (3.30.5-1) ... Setting up librhash1:arm64 (1.4.5-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libevent-core-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:arm64 (1.15.0-1+b1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up chrpath (0.18-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:arm64 (14.2.0-8) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libevent-openssl-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libxext6:arm64 (2:1.3.4-1+b2) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:arm64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:arm64 (2.0.18-1+b1) ... Setting up libnl-route-3-200:arm64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:arm64 (535.171.04-1+b1) ... Setting up help2man (1.49.3+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:arm64 (2.4.7-8) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:arm64 (1:17.0.6-18) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libevent-extra-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:arm64 (2.4.123-1) ... Setting up libnl-3-dev:arm64 (3.7.0-0.3+b1) ... Setting up groff-base (1.23.0-5) ... Setting up gfortran-14-aarch64-linux-gnu (14.2.0-8) ... Setting up libhwloc-dev:arm64 (2.11.2-1) ... Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libarchive13t64:arm64 (3.7.4-1.1) ... Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... Setting up libibverbs1:arm64 (52.0-2+b1) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up ibverbs-providers:arm64 (52.0-2+b1) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhwloc-plugins:arm64 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnl-route-3-dev:arm64 (3.7.0-0.3+b1) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:arm64 (5.0.3-2+b1) ... Setting up cmake (3.30.5-1) ... Setting up librdmacm1t64:arm64 (52.0-2+b1) ... Setting up libpmix-dev:arm64 (5.0.3-2+b1) ... Setting up libhsakmt1:arm64 (6.1.2+ds-1) ... Setting up libfabric1:arm64 (1.17.0-3.1) ... Setting up debhelper (13.20) ... Setting up libibverbs-dev:arm64 (52.0-2+b1) ... Setting up libhsa-runtime64-1:arm64 (6.1.2-2) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up libucx0:arm64 (1.17.0+ds-3) ... Setting up libopenmpi3t64:arm64 (5.0.5-3) ... Setting up openmpi-bin (5.0.5-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up mpi-default-bin (1.17) ... Setting up libopenmpi-dev:arm64 (5.0.5-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev (1.17) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/ffindex-0.9.9.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ffindex_0.9.9.9-7_source.changes dpkg-buildpackage: info: source package ffindex dpkg-buildpackage: info: source version 0.9.9.9-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' make -C src clean make[2]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9/src' rm -f ffindex_apply ffindex_from_fasta ffindex_get ffindex_build ffindex_modify ffindex_unpack ffindex_from_tsv ffindex_apply_mpi ffindex.o ffindex_posix_search.o ffutil.o libffindex.so libffindex.so.2.0.2 libffindex.a \ libffindex.so libffindex.so.2.0.2 libffindex.a \ ffindex_build.o ffindex_get.o ffindex_modify.o ffindex_from_fasta.o ffindex_apply_mpi.o \ ffindex_apply.o ffindex_from_tsv.o ffindex_unpack.o ffindex_posix_search.o ffindex_apply_mpi_spawn.o \ make[2]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9/src' make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule rm -f ffindex_apply.1 ffindex_build.1 ffindex_from_fasta.1 ffindex_get.1 ffindex_modify.1 ffindex_unpack.1 ffindex_apply_mpi.1 ffindex_from_tsv.1 ffindex_apply_mpi.1 dh_clean make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules binary debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j12 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' make -C src all make[2]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9/src' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex.o ffindex.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_posix_search.o ffindex_posix_search.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffutil.o ffutil.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_from_fasta.o ffindex_from_fasta.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_get.o ffindex_get.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_build.o ffindex_build.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_modify.o ffindex_modify.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_unpack.o ffindex_unpack.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ffindex_from_tsv.o ffindex_from_tsv.c cc -I/usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_MPI -c ffindex_apply_mpi.c -o ffindex_apply_mpi.o ffindex.c: In function 'ffindex_write': ffindex.c:577:3: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result] 577 | ftruncate(fileno(index_file), ftell(index_file)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ffindex.c: In function 'ffindex_insert_dir': ffindex.c:234:5: warning: '__builtin_strncpy' output may be truncated copying 255 bytes from a string of length 255 [-Wstringop-truncation] 234 | strncpy(path + input_dir_name_len, entry->d_name, NAME_MAX); | ^ cc -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,-soname,libffindex.so.2.0.2 -shared -o libffindex.so.2.0.2 ffindex.o ffindex_posix_search.o ffutil.o ar rcs libffindex.a ffindex.o ffindex_posix_search.o ffutil.o ln -sf libffindex.so.2.0.2 libffindex.so cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c ffindex_apply_mpi.c -o ffindex_apply.o cc -o ffindex_from_fasta ffindex_from_fasta.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -o ffindex_get ffindex_get.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -o ffindex_build ffindex_build.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -o ffindex_modify ffindex_modify.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -o ffindex_unpack ffindex_unpack.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -o ffindex_from_tsv ffindex_from_tsv.o -Wl,-z,relro -Wl,-z,now -L. -lffindex cc -I/usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_MPI -o ffindex_apply_mpi ffindex_apply_mpi.o -Wl,-z,relro -Wl,-z,now -L. -lffindex -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ffindex-0.9.9.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -std=c99 -O2 -g -fPIC -Wall -pedantic -D_GNU_SOURCE=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -o ffindex_apply ffindex_apply.o -Wl,-z,relro -Wl,-z,now -L. -lffindex make[2]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9/src' make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule dh_auto_test -- FFINDEX_MAX_INDEX_ENTRIES=20000 check make -j12 test FFINDEX_MAX_INDEX_ENTRIES=20000 check make[2]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' make[2]: 'test' is up to date. make -C src check make[3]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9/src' rm -f /tmp/test.data /tmp/test.ffindex LD_LIBRARY_PATH=".:" ./ffindex_build -s /tmp/test.data /tmp/test.ffindex ../test/data ../test/data2 LD_LIBRARY_PATH=".:" ./ffindex_get /tmp/test.data /tmp/test.ffindex a b foo | tee /tmp/test.out a bb fooo fooo LD_LIBRARY_PATH=".:" ./ffindex_modify -u /tmp/test.ffindex b LD_LIBRARY_PATH=".:" ./ffindex_get /tmp/test.data /tmp/test.ffindex a b foo | tee /tmp/test-unlink.out ffindex_get.c:152 ffindex_get key not found in index: b: No such file or directory a fooo fooo LD_LIBRARY_PATH=".:" ./ffindex_build -a -s /tmp/test.data /tmp/test.ffindex ../test/testfile ======== compare results ========= diff /tmp/test.out test.should diff /tmp/test-unlink.out test-unlink.should ======== error handling ========== LD_LIBRARY_PATH=".:" ./ffindex_get /tmp/test.data /tmp/test.ffindex nonexistquery b foo || echo ffindex_get.c:152 ffindex_get key not found in index: nonexistquery: No such file or directory ffindex_get.c:152 ffindex_get key not found in index: b: No such file or directory fooo fooo LD_LIBRARY_PATH=".:" ./ffindex_get /nonexist/data /tmp/test.ffindex a foo || echo /nonexist/data: No such file or directory ffindex_get.c:80 ffindex_index_db_open failed: ./ffindex_get: Invalid argument LD_LIBRARY_PATH=".:" ./ffindex_get /tmp/test.data /nonexist/index a foo || echo /nonexist/index: No such file or directory ffindex_get.c:80 ffindex_index_db_open failed: ./ffindex_get: Invalid argument make[3]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9/src' make[2]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/ffindex-0.9.9.9/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' make -C src install make[2]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9/src' mkdir -p /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin mkdir -p /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/lib mkdir -p /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/include install ffindex_get /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_get install ffindex_build /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_build install ffindex_modify /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_modify install ffindex_from_fasta /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_from_fasta install ffindex_from_tsv /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_from_tsv install ffindex_apply /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_apply install ffindex_unpack /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_unpack install libffindex.so.2.0.2 /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/lib/libffindex.so.2.0.2 install libffindex.a /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/lib/libffindex.a ln -sf libffindex.so.2.0.2 /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/lib/libffindex.so.0 ln -sf libffindex.so.2.0.2 /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/lib/libffindex.so install ffindex.h /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/include/ffindex.h install ffutil.h /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/include/ffutil.h install ffindex_posix_search.h /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/include/ffindex_posix_search.h install ffindex_apply_mpi /build/reproducible-path/ffindex-0.9.9.9/debian/tmp/usr/bin/ffindex_apply_mpi make[2]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9/src' make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule dh_install find debian -name ffindex_apply_mpi -exec chrpath --delete \{\} \; make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule dh_installexamples cp -aR test /build/reproducible-path/ffindex-0.9.9.9/debian/ffindex/usr/share/doc/ffindex/examples/; cp ./src/test.should /build/reproducible-path/ffindex-0.9.9.9/debian/ffindex/usr/share/doc/ffindex/examples/; cp ./src/test-unlink.should /build/reproducible-path/ffindex-0.9.9.9/debian/ffindex/usr/share/doc/ffindex/examples/; make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/ffindex-0.9.9.9' debian/rules:39: target 'ffindex_apply_mpi.1' given more than once in the same rule unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_apply" --version-option="-v" 'debian/tmp/usr/bin/ffindex_apply' -o 'ffindex_apply.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_build" --version-option="-v" 'debian/tmp/usr/bin/ffindex_build' -o 'ffindex_build.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_from_fasta" --version-option="-v" 'debian/tmp/usr/bin/ffindex_from_fasta' -o 'ffindex_from_fasta.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_get" --version-option="-v" 'debian/tmp/usr/bin/ffindex_get' -o 'ffindex_get.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_modify" --version-option="-v" 'debian/tmp/usr/bin/ffindex_modify' -o 'ffindex_modify.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_unpack" --version-option="-v" 'debian/tmp/usr/bin/ffindex_unpack' -o 'ffindex_unpack.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_apply_mpi" --version-option="-v" 'debian/tmp/usr/bin/ffindex_apply_mpi' -o 'ffindex_apply_mpi.1' --include debian/man_notes.nroff unset LD_PRELOAD && export LD_LIBRARY_PATH=debian/tmp/usr/lib && eval 'ffindex_apply="apply a program to each FFindex entry"; ffindex_build="build file index from files in directories"; ffindex_from_fasta="populate index from FASTA file"; ffindex_get="retrieve entries from file index"; ffindex_modify="modify file index entries"; ffindex_unpack="unpack file index entries"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)"; ffindex_from_tsv="populate index from TSV file"; ffindex_apply_mpi="apply a program to each FFindex entry (mpi enhanced)";' && help2man --no-info --no-discard-stderr '--help-option= ' -n "$ffindex_from_tsv" --version-option="-v" 'debian/tmp/usr/bin/ffindex_from_tsv' -o 'ffindex_from_tsv.1' --include debian/man_notes.nroff dh_installman make[1]: Leaving directory '/build/reproducible-path/ffindex-0.9.9.9' dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'ffindex' in '../ffindex_0.9.9.9-7_arm64.deb'. dpkg-deb: building package 'libffindex0t64' in '../libffindex0t64_0.9.9.9-7_arm64.deb'. dpkg-deb: building package 'libffindex0t64-dbgsym' in '../libffindex0t64-dbgsym_0.9.9.9-7_arm64.deb'. dpkg-deb: building package 'ffindex-dbgsym' in '../ffindex-dbgsym_0.9.9.9-7_arm64.deb'. dpkg-deb: building package 'libffindex0-dev' in '../libffindex0-dev_0.9.9.9-7_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ffindex_0.9.9.9-7_arm64.buildinfo dpkg-genchanges --build=binary -O../ffindex_0.9.9.9-7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1266315/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1266315 and its subdirectories I: Current time: Mon Dec 15 07:54:46 +14 2025 I: pbuilder-time-stamp: 1765734886