I: pbuilder: network access will be disabled during build
I: Current time: Tue Nov 19 02:33:50 +14 2024
I: pbuilder-time-stamp: 1731933230
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [fenicsx-performance-tests_0.9.0-2.dsc]
I: copying [./fenicsx-performance-tests_0.9.0.orig.tar.gz]
I: copying [./fenicsx-performance-tests_0.9.0-2.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sun Nov 10 14:49:36 2024 
gpgv:                using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.9.0-2.dsc: no acceptable signature found
dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.9.0
dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0.orig.tar.gz
dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_complex_build.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1392993/tmp/hooks/D01_modify_environment starting
debug: Running on codethink04-arm64.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Nov 18 12:33 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/1392993/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/1392993/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu")
  BASH_VERSION='5.2.32(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=arm64
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DIRSTACK=()
  DISTRIBUTION=unstable
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=aarch64
  HOST_ARCH=arm64
  IFS=' 	
  '
  INVOCATION_ID=d1f859dd1020456db4d7de6bb92d084e
  LANG=C
  LANGUAGE=nl_BE:nl
  LC_ALL=C
  MACHTYPE=aarch64-unknown-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=1392993
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lSMKxZVa/pbuilderrc_BGd0 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lSMKxZVa/b2 --logfile b2/build.log fenicsx-performance-tests_0.9.0-2.dsc'
  SUDO_GID=109
  SUDO_UID=104
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://192.168.101.4:3128
I: uname -a
  Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Aug  4 21:30 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/1392993/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.9~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 20084 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on cmake (>= 3.16~); however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-dev (>= 1.70~); however:
  Package libboost-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 1:0.9~); however:
  Package libdolfinx-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libdolfinx-real-dev; however:
  Package libdolfinx-real-dev is not installed.
 pbuilder-satisfydepends-dummy depends on mpi-default-dev; however:
  Package mpi-default-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-ffcx; however:
  Package python3-ffcx is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} catch2{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-aarch64-linux-gnu{a} gfortran-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libadios2-common-c++11-dev{a} libadios2-common-core-dev{a} libadios2-mpi-auxiliary-2.10{a} libadios2-mpi-auxiliary-dev{a} libadios2-mpi-c++11-2.10{a} libadios2-mpi-c++11-dev{a} libadios2-mpi-core-2.10{a} libadios2-mpi-core-dev{a} libadios2-mpi-plugins{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcamd3{a} libcatch2-dev{a} libcbor0.10{a} libccolamd3{a} libcholmod5{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real0.9{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libgfortran-14-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.31.0{a} libhypre-dev{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libp11-kit-dev{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpciaccess0{a} libpetsc-real3.21{a} libpetsc-real3.21-dev{a} libpetsc3.21-dev-common{a} libpgm-5.3-0t64{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libslepc-real3.21{a} libslepc-real3.21-dev{a} libsodium23{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsz2{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} libyaml-0-2{a} libyaml-cpp0.8{a} libyaml-dev{a} libz3-4{a} libzmq5{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-autocommand{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-dev{a} python3-ffcx{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufl{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} valgrind{a} valgrind-mpi{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  ca-certificates curl gdb javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libgraphblas-dev libldap-common libmail-sendmail-perl libpetsc3.21-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix wget xauth zsh 
0 packages upgraded, 343 newly installed, 0 to remove and 0 not upgraded.
Need to get 253 MB of archives. After unpacking 1251 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB]
Get: 2 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB]
Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB]
Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB]
Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB]
Get: 8 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB]
Get: 9 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB]
Get: 10 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB]
Get: 11 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B]
Get: 12 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB]
Get: 13 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB]
Get: 14 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 15 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB]
Get: 16 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB]
Get: 17 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB]
Get: 18 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB]
Get: 19 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB]
Get: 20 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB]
Get: 21 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B]
Get: 22 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB]
Get: 24 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB]
Get: 25 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB]
Get: 26 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB]
Get: 27 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB]
Get: 28 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB]
Get: 29 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB]
Get: 30 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB]
Get: 31 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB]
Get: 32 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get: 33 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB]
Get: 34 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB]
Get: 35 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB]
Get: 36 http://deb.debian.org/debian unstable/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB]
Get: 37 http://deb.debian.org/debian unstable/main arm64 libfido2-1 arm64 1.15.0-1+b1 [74.3 kB]
Get: 38 http://deb.debian.org/debian unstable/main arm64 openssh-client arm64 1:9.9p1-3 [928 kB]
Get: 39 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get: 40 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB]
Get: 41 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get: 42 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get: 43 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB]
Get: 44 http://deb.debian.org/debian unstable/main arm64 libcatch2-dev arm64 3.7.1-0.4 [588 kB]
Get: 45 http://deb.debian.org/debian unstable/main arm64 catch2 all 3.7.1-0.4 [5052 B]
Get: 46 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.0-1 [2265 kB]
Get: 47 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB]
Get: 48 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
Get: 49 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB]
Get: 50 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get: 51 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB]
Get: 52 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB]
Get: 53 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB]
Get: 54 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB]
Get: 55 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB]
Get: 56 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB]
Get: 57 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB]
Get: 58 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB]
Get: 59 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-2 [73.1 kB]
Get: 60 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB]
Get: 61 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB]
Get: 62 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.0-1 [9874 kB]
Get: 63 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.1-1+b1 [55.1 kB]
Get: 64 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get: 65 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB]
Get: 66 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 67 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 68 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 69 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 70 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get: 71 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get: 72 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB]
Get: 73 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 74 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 75 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB]
Get: 76 http://deb.debian.org/debian unstable/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 77 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB]
Get: 78 http://deb.debian.org/debian unstable/main arm64 libgfortran-14-dev arm64 14.2.0-8 [418 kB]
Get: 79 http://deb.debian.org/debian unstable/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-8 [9791 kB]
Get: 80 http://deb.debian.org/debian unstable/main arm64 gfortran-14 arm64 14.2.0-8 [12.2 kB]
Get: 81 http://deb.debian.org/debian unstable/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1 [1284 B]
Get: 82 http://deb.debian.org/debian unstable/main arm64 gfortran arm64 4:14.2.0-1 [1424 B]
Get: 83 http://deb.debian.org/debian unstable/main arm64 libnl-3-200 arm64 3.7.0-0.3+b1 [57.0 kB]
Get: 84 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-200 arm64 3.7.0-0.3+b1 [167 kB]
Get: 85 http://deb.debian.org/debian unstable/main arm64 libibverbs1 arm64 52.0-2+b1 [58.8 kB]
Get: 86 http://deb.debian.org/debian unstable/main arm64 ibverbs-providers arm64 52.0-2+b1 [321 kB]
Get: 87 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB]
Get: 88 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB]
Get: 89 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB]
Get: 90 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB]
Get: 91 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB]
Get: 92 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB]
Get: 93 http://deb.debian.org/debian unstable/main arm64 libadios2-common-c++11-dev all 2.10.1+dfsg1-12 [25.3 kB]
Get: 94 http://deb.debian.org/debian unstable/main arm64 libadios2-common-core-dev arm64 2.10.1+dfsg1-12 [123 kB]
Get: 95 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-auxiliary-2.10 arm64 2.10.1+dfsg1-12 [360 kB]
Get: 96 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-auxiliary-dev arm64 2.10.1+dfsg1-12 [22.8 kB]
Get: 97 http://deb.debian.org/debian unstable/main arm64 librdmacm1t64 arm64 52.0-2+b1 [67.4 kB]
Get: 98 http://deb.debian.org/debian unstable/main arm64 libfabric1 arm64 1.17.0-3.1 [480 kB]
Get: 99 http://deb.debian.org/debian unstable/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB]
Get: 100 http://deb.debian.org/debian unstable/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB]
Get: 101 http://deb.debian.org/debian unstable/main arm64 libhwloc15 arm64 2.11.2-1 [141 kB]
Get: 102 http://deb.debian.org/debian unstable/main arm64 libmunge2 arm64 0.5.15-4+b1 [19.4 kB]
Get: 103 http://deb.debian.org/debian unstable/main arm64 libpciaccess0 arm64 0.17-3+b2 [51.2 kB]
Get: 104 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB]
Get: 105 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3+b2 [24.4 kB]
Get: 106 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB]
Get: 107 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 108 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB]
Get: 109 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB]
Get: 110 http://deb.debian.org/debian unstable/main arm64 libxnvctrl0 arm64 535.171.04-1+b1 [14.1 kB]
Get: 111 http://deb.debian.org/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.3.2-1+b2 [39.3 kB]
Get: 112 http://deb.debian.org/debian unstable/main arm64 libhwloc-plugins arm64 2.11.2-1 [17.9 kB]
Get: 113 http://deb.debian.org/debian unstable/main arm64 libpmix2t64 arm64 5.0.3-2+b1 [588 kB]
Get: 114 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB]
Get: 115 http://deb.debian.org/debian unstable/main arm64 libllvm17t64 arm64 1:17.0.6-18 [21.3 MB]
Get: 116 http://deb.debian.org/debian unstable/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB]
Get: 117 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B]
Get: 118 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB]
Get: 119 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB]
Get: 120 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.18-1+b1 [21.8 kB]
Get: 121 http://deb.debian.org/debian unstable/main arm64 libhsakmt1 arm64 6.1.2+ds-1 [56.9 kB]
Get: 122 http://deb.debian.org/debian unstable/main arm64 libhsa-runtime64-1 arm64 6.1.2-2 [300 kB]
Get: 123 http://deb.debian.org/debian unstable/main arm64 libamdhip64-5 arm64 5.7.1-5 [8823 kB]
Get: 124 http://deb.debian.org/debian unstable/main arm64 libibumad3 arm64 52.0-2+b1 [27.1 kB]
Get: 125 http://deb.debian.org/debian unstable/main arm64 libibmad5 arm64 52.0-2+b1 [41.5 kB]
Get: 126 http://deb.debian.org/debian unstable/main arm64 libucx0 arm64 1.17.0+ds-3 [959 kB]
Get: 127 http://deb.debian.org/debian unstable/main arm64 libopenmpi3t64 arm64 5.0.5-6 [1806 kB]
Get: 128 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB]
Get: 129 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B]
Get: 130 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-103-1t64 arm64 1.10.10+repack-4 [1095 kB]
Get: 131 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB]
Get: 132 http://deb.debian.org/debian unstable/main arm64 libpugixml1v5 arm64 1.14-2 [80.1 kB]
Get: 133 http://deb.debian.org/debian unstable/main arm64 libyaml-cpp0.8 arm64 0.8.0+dfsg-6+b2 [119 kB]
Get: 134 http://deb.debian.org/debian unstable/main arm64 libnorm1t64 arm64 1.5.9+dfsg-3.1+b1 [205 kB]
Get: 135 http://deb.debian.org/debian unstable/main arm64 libpgm-5.3-0t64 arm64 5.3.128~dfsg-2.1+b1 [152 kB]
Get: 136 http://deb.debian.org/debian unstable/main arm64 libsodium23 arm64 1.0.18-1+b2 [121 kB]
Get: 137 http://deb.debian.org/debian unstable/main arm64 libzmq5 arm64 4.3.5-1+b3 [253 kB]
Get: 138 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-plugins arm64 2.10.1+dfsg1-12 [14.6 kB]
Get: 139 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-core-2.10 arm64 2.10.1+dfsg1-12 [1515 kB]
Get: 140 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-c++11-2.10 arm64 2.10.1+dfsg1-12 [184 kB]
Get: 141 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-core-dev arm64 2.10.1+dfsg1-12 [79.3 kB]
Get: 142 http://deb.debian.org/debian unstable/main arm64 libadios2-mpi-c++11-dev arm64 2.10.1+dfsg1-12 [10.8 kB]
Get: 143 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB]
Get: 144 http://deb.debian.org/debian unstable/main arm64 libsuitesparseconfig7 arm64 1:7.8.3+dfsg-2 [23.7 kB]
Get: 145 http://deb.debian.org/debian unstable/main arm64 libamd3 arm64 1:7.8.3+dfsg-2 [38.1 kB]
Get: 146 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB]
Get: 147 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB]
Get: 148 http://deb.debian.org/debian unstable/main arm64 libarpack2t64 arm64 3.9.1-1.1+b2 [81.3 kB]
Get: 149 http://deb.debian.org/debian unstable/main arm64 libblas-dev arm64 3.12.0-3+b1 [106 kB]
Get: 150 http://deb.debian.org/debian unstable/main arm64 liblapack-dev arm64 3.12.0-3+b1 [3709 kB]
Get: 151 http://deb.debian.org/debian unstable/main arm64 libarpack2-dev arm64 3.9.1-1.1+b2 [98.3 kB]
Get: 152 http://deb.debian.org/debian unstable/main arm64 libbasix0.9 arm64 0.9.0-2+b1 [356 kB]
Get: 153 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get: 154 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get: 155 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get: 156 http://deb.debian.org/debian unstable/main arm64 libeigen3-dev all 3.4.0-4 [1041 kB]
Get: 157 http://deb.debian.org/debian unstable/main arm64 libbasix-dev arm64 0.9.0-2+b1 [67.2 kB]
Get: 158 http://deb.debian.org/debian unstable/main arm64 libboost1.83-dev arm64 1.83.0-3.2+b1 [10.6 MB]
Get: 159 http://deb.debian.org/debian unstable/main arm64 libboost-atomic1.83.0 arm64 1.83.0-3.2+b1 [234 kB]
Get: 160 http://deb.debian.org/debian unstable/main arm64 libboost-atomic1.83-dev arm64 1.83.0-3.2+b1 [234 kB]
Get: 161 http://deb.debian.org/debian unstable/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-3.2+b1 [239 kB]
Get: 162 http://deb.debian.org/debian unstable/main arm64 libboost-chrono1.83-dev arm64 1.83.0-3.2+b1 [245 kB]
Get: 163 http://deb.debian.org/debian unstable/main arm64 libboost-chrono-dev arm64 1.83.0.2+b2 [4212 B]
Get: 164 http://deb.debian.org/debian unstable/main arm64 libboost-date-time1.83.0 arm64 1.83.0-3.2+b1 [230 kB]
Get: 165 http://deb.debian.org/debian unstable/main arm64 libboost-serialization1.83.0 arm64 1.83.0-3.2+b1 [325 kB]
Get: 166 http://deb.debian.org/debian unstable/main arm64 libboost-serialization1.83-dev arm64 1.83.0-3.2+b1 [374 kB]
Get: 167 http://deb.debian.org/debian unstable/main arm64 libboost-date-time1.83-dev arm64 1.83.0-3.2+b1 [239 kB]
Get: 168 http://deb.debian.org/debian unstable/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B]
Get: 169 http://deb.debian.org/debian unstable/main arm64 libboost-filesystem1.83.0 arm64 1.83.0-3.2+b1 [273 kB]
Get: 170 http://deb.debian.org/debian unstable/main arm64 libboost-system1.83.0 arm64 1.83.0-3.2+b1 [231 kB]
Get: 171 http://deb.debian.org/debian unstable/main arm64 libboost-system1.83-dev arm64 1.83.0-3.2+b1 [232 kB]
Get: 172 http://deb.debian.org/debian unstable/main arm64 libboost-filesystem1.83-dev arm64 1.83.0-3.2+b1 [293 kB]
Get: 173 http://deb.debian.org/debian unstable/main arm64 libboost-filesystem-dev arm64 1.83.0.2+b2 [3616 B]
Get: 174 http://deb.debian.org/debian unstable/main arm64 libboost-regex1.83.0 arm64 1.83.0-3.2+b1 [314 kB]
Get: 175 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB]
Get: 176 http://deb.debian.org/debian unstable/main arm64 libboost-regex1.83-dev arm64 1.83.0-3.2+b1 [335 kB]
Get: 177 http://deb.debian.org/debian unstable/main arm64 libboost-iostreams1.83-dev arm64 1.83.0-3.2+b1 [261 kB]
Get: 178 http://deb.debian.org/debian unstable/main arm64 libboost-iostreams-dev arm64 1.83.0.2+b2 [3568 B]
Get: 179 http://deb.debian.org/debian unstable/main arm64 libboost-math1.83.0 arm64 1.83.0-3.2+b1 [471 kB]
Get: 180 http://deb.debian.org/debian unstable/main arm64 libboost-math1.83-dev arm64 1.83.0-3.2+b1 [535 kB]
Get: 181 http://deb.debian.org/debian unstable/main arm64 libboost-math-dev arm64 1.83.0.2+b2 [3784 B]
Get: 182 http://deb.debian.org/debian unstable/main arm64 libboost-mpi1.83.0 arm64 1.83.0-3.2+b1 [268 kB]
Get: 183 http://deb.debian.org/debian unstable/main arm64 openmpi-common all 5.0.5-6 [95.0 kB]
Get: 184 http://deb.debian.org/debian unstable/main arm64 libnl-3-dev arm64 3.7.0-0.3+b1 [101 kB]
Get: 185 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-dev arm64 3.7.0-0.3+b1 [198 kB]
Get: 186 http://deb.debian.org/debian unstable/main arm64 libibverbs-dev arm64 52.0-2+b1 [625 kB]
Get: 187 http://deb.debian.org/debian unstable/main arm64 libnuma-dev arm64 2.0.18-1+b1 [37.8 kB]
Get: 188 http://deb.debian.org/debian unstable/main arm64 libltdl7 arm64 2.4.7-8 [392 kB]
Get: 189 http://deb.debian.org/debian unstable/main arm64 libltdl-dev arm64 2.4.7-8 [165 kB]
Get: 190 http://deb.debian.org/debian unstable/main arm64 libhwloc-dev arm64 2.11.2-1 [237 kB]
Get: 191 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB]
Get: 192 http://deb.debian.org/debian unstable/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB]
Get: 193 http://deb.debian.org/debian unstable/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB]
Get: 194 http://deb.debian.org/debian unstable/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB]
Get: 195 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB]
Get: 196 http://deb.debian.org/debian unstable/main arm64 libpmix-dev arm64 5.0.3-2+b1 [3930 kB]
Get: 197 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 198 http://deb.debian.org/debian unstable/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 199 http://deb.debian.org/debian unstable/main arm64 openmpi-bin arm64 5.0.5-6 [180 kB]
Get: 200 http://deb.debian.org/debian unstable/main arm64 libopenmpi-dev arm64 5.0.5-6 [1087 kB]
Get: 201 http://deb.debian.org/debian unstable/main arm64 mpi-default-dev arm64 1.17 [3148 B]
Get: 202 http://deb.debian.org/debian unstable/main arm64 libboost-mpi1.83-dev arm64 1.83.0-3.2+b1 [291 kB]
Get: 203 http://deb.debian.org/debian unstable/main arm64 libboost-mpi-dev arm64 1.83.0.2+b2 [3668 B]
Get: 204 http://deb.debian.org/debian unstable/main arm64 libboost-program-options1.83.0 arm64 1.83.0-3.2+b1 [331 kB]
Get: 205 http://deb.debian.org/debian unstable/main arm64 libboost-program-options1.83-dev arm64 1.83.0-3.2+b1 [369 kB]
Get: 206 http://deb.debian.org/debian unstable/main arm64 libboost-program-options-dev arm64 1.83.0.2+b2 [3600 B]
Get: 207 http://deb.debian.org/debian unstable/main arm64 libboost-serialization-dev arm64 1.83.0.2+b2 [3816 B]
Get: 208 http://deb.debian.org/debian unstable/main arm64 libboost-thread1.83.0 arm64 1.83.0-3.2+b1 [266 kB]
Get: 209 http://deb.debian.org/debian unstable/main arm64 libboost-thread1.83-dev arm64 1.83.0-3.2+b1 [276 kB]
Get: 210 http://deb.debian.org/debian unstable/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B]
Get: 211 http://deb.debian.org/debian unstable/main arm64 libboost-timer1.83.0 arm64 1.83.0-3.2+b1 [235 kB]
Get: 212 http://deb.debian.org/debian unstable/main arm64 libboost-timer1.83-dev arm64 1.83.0-3.2+b1 [236 kB]
Get: 213 http://deb.debian.org/debian unstable/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B]
Get: 214 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB]
Get: 215 http://deb.debian.org/debian unstable/main arm64 libbtf2 arm64 1:7.8.3+dfsg-2 [24.3 kB]
Get: 216 http://deb.debian.org/debian unstable/main arm64 libc6-dbg arm64 2.40-3 [6477 kB]
Get: 217 http://deb.debian.org/debian unstable/main arm64 libcamd3 arm64 1:7.8.3+dfsg-2 [35.2 kB]
Get: 218 http://deb.debian.org/debian unstable/main arm64 libccolamd3 arm64 1:7.8.3+dfsg-2 [37.7 kB]
Get: 219 http://deb.debian.org/debian unstable/main arm64 libcolamd3 arm64 1:7.8.3+dfsg-2 [31.5 kB]
Get: 220 http://deb.debian.org/debian unstable/main arm64 libcholmod5 arm64 1:7.8.3+dfsg-2 [536 kB]
Get: 221 http://deb.debian.org/debian unstable/main arm64 libcombblas2.0.0t64 arm64 2.0.0-6 [258 kB]
Get: 222 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB]
Get: 223 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB]
Get: 224 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.18+dfsg-3+b1 [300 kB]
Get: 225 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB]
Get: 226 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB]
Get: 227 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB]
Get: 228 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB]
Get: 229 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1 [553 kB]
Get: 230 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB]
Get: 231 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB]
Get: 232 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB]
Get: 233 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB]
Get: 234 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB]
Get: 235 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB]
Get: 236 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB]
Get: 237 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB]
Get: 238 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get: 239 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB]
Get: 240 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.0-1 [447 kB]
Get: 241 http://deb.debian.org/debian unstable/main arm64 libcxsparse4 arm64 1:7.8.3+dfsg-2 [75.9 kB]
Get: 242 http://deb.debian.org/debian unstable/main arm64 libfmt10 arm64 10.1.1+ds1-4 [121 kB]
Get: 243 http://deb.debian.org/debian unstable/main arm64 libfftw3-double3 arm64 3.3.10-2 [337 kB]
Get: 244 http://deb.debian.org/debian unstable/main arm64 libfftw3-long3 arm64 3.3.10-2 [546 kB]
Get: 245 http://deb.debian.org/debian unstable/main arm64 libfftw3-single3 arm64 3.3.10-2 [516 kB]
Get: 246 http://deb.debian.org/debian unstable/main arm64 libfftw3-mpi3 arm64 3.3.10-2 [53.8 kB]
Get: 247 http://deb.debian.org/debian unstable/main arm64 libmetis5 arm64 5.1.0.dfsg-7+b2 [161 kB]
Get: 248 http://deb.debian.org/debian unstable/main arm64 libptscotch-7.0 arm64 7.0.5-1 [609 kB]
Get: 249 http://deb.debian.org/debian unstable/main arm64 libsuperlu-dist8 arm64 8.2.1+dfsg1-5 [526 kB]
Get: 250 http://deb.debian.org/debian unstable/main arm64 libhypre-2.31.0 arm64 2.31.0-3 [1498 kB]
Get: 251 http://deb.debian.org/debian unstable/main arm64 libklu2 arm64 1:7.8.3+dfsg-2 [82.1 kB]
Get: 252 http://deb.debian.org/debian unstable/main arm64 mpi-default-bin arm64 1.17 [2372 B]
Get: 253 http://deb.debian.org/debian unstable/main arm64 libscalapack-openmpi2.2 arm64 2.2.1-5 [1236 kB]
Get: 254 http://deb.debian.org/debian unstable/main arm64 libmumps-5.7 arm64 5.7.3-3 [1706 kB]
Get: 255 http://deb.debian.org/debian unstable/main arm64 libspqr4 arm64 1:7.8.3+dfsg-2 [127 kB]
Get: 256 http://deb.debian.org/debian unstable/main arm64 libsuperlu7 arm64 7.0.0+dfsg1-2 [144 kB]
Get: 257 http://deb.debian.org/debian unstable/main arm64 libumfpack6 arm64 1:7.8.3+dfsg-2 [228 kB]
Get: 258 http://deb.debian.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1+b2 [49.3 kB]
Get: 259 http://deb.debian.org/debian unstable/main arm64 libpetsc-real3.21 arm64 3.21.6+dfsg1-2 [5146 kB]
Get: 260 http://deb.debian.org/debian unstable/main arm64 libparpack2t64 arm64 3.9.1-1.1+b2 [75.5 kB]
Get: 261 http://deb.debian.org/debian unstable/main arm64 libslepc-real3.21 arm64 3.21.2+dfsg1-2 [877 kB]
Get: 262 http://deb.debian.org/debian unstable/main arm64 libspdlog1.12 arm64 1:1.12.0+ds-2+b3 [95.3 kB]
Get: 263 http://deb.debian.org/debian unstable/main arm64 libdolfinx-real0.9 arm64 1:0.9.0-3 [476 kB]
Get: 264 http://deb.debian.org/debian unstable/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 265 http://deb.debian.org/debian unstable/main arm64 libldl3 arm64 1:7.8.3+dfsg-2 [24.2 kB]
Get: 266 http://deb.debian.org/debian unstable/main arm64 libsuitesparse-mongoose3 arm64 1:7.8.3+dfsg-2 [44.1 kB]
Get: 267 http://deb.debian.org/debian unstable/main arm64 librbio4 arm64 1:7.8.3+dfsg-2 [38.2 kB]
Get: 268 http://deb.debian.org/debian unstable/main arm64 libspex3 arm64 1:7.8.3+dfsg-2 [55.4 kB]
Get: 269 http://deb.debian.org/debian unstable/main arm64 libparu1 arm64 1:7.8.3+dfsg-2 [60.9 kB]
Get: 270 http://deb.debian.org/debian unstable/main arm64 libsuitesparse-dev arm64 1:7.8.3+dfsg-2 [1306 kB]
Get: 271 http://deb.debian.org/debian unstable/main arm64 libscotch-7.0 arm64 7.0.5-1 [365 kB]
Get: 272 http://deb.debian.org/debian unstable/main arm64 libscotch-dev arm64 7.0.5-1 [1533 kB]
Get: 273 http://deb.debian.org/debian unstable/main arm64 libptscotch-dev arm64 7.0.5-1 [1296 kB]
Get: 274 http://deb.debian.org/debian unstable/main arm64 libscalapack-openmpi-dev arm64 2.2.1-5 [10.7 kB]
Get: 275 http://deb.debian.org/debian unstable/main arm64 libscalapack-mpi-dev arm64 2.2.1-5 [5888 B]
Get: 276 http://deb.debian.org/debian unstable/main arm64 libfftw3-bin arm64 3.3.10-2 [43.5 kB]
Get: 277 http://deb.debian.org/debian unstable/main arm64 libfftw3-dev arm64 3.3.10-2 [1275 kB]
Get: 278 http://deb.debian.org/debian unstable/main arm64 libfftw3-mpi-dev arm64 3.3.10-2 [59.2 kB]
Get: 279 http://deb.debian.org/debian unstable/main arm64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB]
Get: 280 http://deb.debian.org/debian unstable/main arm64 opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB]
Get: 281 http://deb.debian.org/debian unstable/main arm64 ocl-icd-opencl-dev arm64 2.3.2-1+b2 [8660 B]
Get: 282 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-fortran-102t64 arm64 1.10.10+repack-4 [88.6 kB]
Get: 283 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB]
Get: 284 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.1 kB]
Get: 285 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB]
Get: 286 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB]
Get: 287 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB]
Get: 288 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB]
Get: 289 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB]
Get: 290 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-dev arm64 1.10.10+repack-4 [2782 kB]
Get: 291 http://deb.debian.org/debian unstable/main arm64 libhdf5-mpi-dev arm64 1.10.10+repack-4 [15.6 kB]
Get: 292 http://deb.debian.org/debian unstable/main arm64 libsuperlu-dev arm64 7.0.0+dfsg1-2 [21.9 kB]
Get: 293 http://deb.debian.org/debian unstable/main arm64 libsuperlu-dist-dev arm64 8.2.1+dfsg1-5 [843 kB]
Get: 294 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 295 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB]
Get: 296 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB]
Get: 297 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.2-3+b2 [40.6 kB]
Get: 298 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 299 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB]
Get: 300 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.10-2 [877 kB]
Get: 301 http://deb.debian.org/debian unstable/main arm64 libyaml-dev arm64 0.2.5-1+b2 [61.2 kB]
Get: 302 http://deb.debian.org/debian unstable/main arm64 libpetsc3.21-dev-common all 3.21.6+dfsg1-2 [309 kB]
Get: 303 http://deb.debian.org/debian unstable/main arm64 libhypre-dev arm64 2.31.0-3 [1830 kB]
Get: 304 http://deb.debian.org/debian unstable/main arm64 libmumps-headers-dev all 5.7.3-3 [36.3 kB]
Get: 305 http://deb.debian.org/debian unstable/main arm64 libmumps-dev arm64 5.7.3-3 [1738 kB]
Get: 306 http://deb.debian.org/debian unstable/main arm64 valgrind arm64 1:3.20.0-2.1 [7947 kB]
Get: 307 http://deb.debian.org/debian unstable/main arm64 valgrind-mpi arm64 1:3.20.0-2.1 [121 kB]
Get: 308 http://deb.debian.org/debian unstable/main arm64 libpetsc-real3.21-dev arm64 3.21.6+dfsg1-2 [7054 kB]
Get: 309 http://deb.debian.org/debian unstable/main arm64 libparpack2-dev arm64 3.9.1-1.1+b2 [90.3 kB]
Get: 310 http://deb.debian.org/debian unstable/main arm64 libslepc-real3.21-dev arm64 3.21.2+dfsg1-2 [5701 kB]
Get: 311 http://deb.debian.org/debian unstable/main arm64 libdolfinx-real-dev arm64 1:0.9.0-3 [48.3 kB]
Get: 312 http://deb.debian.org/debian unstable/main arm64 libpugixml-dev arm64 1.14-2 [103 kB]
Get: 313 http://deb.debian.org/debian unstable/main arm64 libfmt-dev arm64 10.1.1+ds1-4 [177 kB]
Get: 314 http://deb.debian.org/debian unstable/main arm64 libspdlog-dev arm64 1:1.12.0+ds-2+b3 [85.5 kB]
Get: 315 http://deb.debian.org/debian unstable/main arm64 libxml2-dev arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [751 kB]
Get: 316 http://deb.debian.org/debian unstable/main arm64 python3-cffi-backend arm64 1.17.1-2+b1 [94.8 kB]
Get: 317 http://deb.debian.org/debian unstable/main arm64 python3-ply all 3.11-7 [62.6 kB]
Get: 318 http://deb.debian.org/debian unstable/main arm64 python3-pycparser all 2.22-2 [78.0 kB]
Get: 319 http://deb.debian.org/debian unstable/main arm64 python3-cffi all 1.17.1-2 [89.4 kB]
Get: 320 http://deb.debian.org/debian unstable/main arm64 libpython3.12t64 arm64 3.12.7-3 [1982 kB]
Get: 321 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.4-1 [143 kB]
Get: 322 http://deb.debian.org/debian unstable/main arm64 libpython3.12-dev arm64 3.12.7-3 [4792 kB]
Get: 323 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.12.7-1 [9980 B]
Get: 324 http://deb.debian.org/debian unstable/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB]
Get: 325 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 326 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
Get: 327 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.12.7-1 [26.1 kB]
Get: 328 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 329 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get: 330 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 331 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 332 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 333 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 334 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 335 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get: 336 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:1.26.4+ds-12 [3816 kB]
Get: 337 http://deb.debian.org/debian unstable/main arm64 python3-ufl all 2024.2.0-2 [150 kB]
Get: 338 http://deb.debian.org/debian unstable/main arm64 python3-basix arm64 0.9.0-2+b1 [122 kB]
Get: 339 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 340 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 341 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get: 342 http://deb.debian.org/debian unstable/main arm64 python3-ffcx all 1:0.9.0-2 [94.9 kB]
Get: 343 http://deb.debian.org/debian unstable/main arm64 libdolfinx-dev arm64 1:0.9.0-3 [201 kB]
Fetched 253 MB in 2s (156 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpython3.12-minimal:arm64.
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Preparing to unpack .../libpython3.12-minimal_3.12.7-3_arm64.deb ...
Unpacking libpython3.12-minimal:arm64 (3.12.7-3) ...
Selecting previously unselected package libexpat1:arm64.
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Unpacking libexpat1:arm64 (2.6.4-1) ...
Selecting previously unselected package python3.12-minimal.
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Unpacking python3.12-minimal (3.12.7-3) ...
Setting up libpython3.12-minimal:arm64 (3.12.7-3) ...
Setting up libexpat1:arm64 (2.6.4-1) ...
Setting up python3.12-minimal (3.12.7-3) ...
Selecting previously unselected package python3-minimal.
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Preparing to unpack .../00-python3-minimal_3.12.7-1_arm64.deb ...
Unpacking python3-minimal (3.12.7-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../02-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
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Preparing to unpack .../03-tzdata_2024b-3_all.deb ...
Unpacking tzdata (2024b-3) ...
Selecting previously unselected package libkrb5support0:arm64.
Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ...
Unpacking libkrb5support0:arm64 (1.21.3-3) ...
Selecting previously unselected package libcom-err2:arm64.
Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_arm64.deb ...
Unpacking libcom-err2:arm64 (1.47.1-1+b1) ...
Selecting previously unselected package libk5crypto3:arm64.
Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ...
Unpacking libk5crypto3:arm64 (1.21.3-3) ...
Selecting previously unselected package libkeyutils1:arm64.
Preparing to unpack .../07-libkeyutils1_1.6.3-4_arm64.deb ...
Unpacking libkeyutils1:arm64 (1.6.3-4) ...
Selecting previously unselected package libkrb5-3:arm64.
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Unpacking libkrb5-3:arm64 (1.21.3-3) ...
Selecting previously unselected package libgssapi-krb5-2:arm64.
Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_arm64.deb ...
Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ...
Selecting previously unselected package libtirpc-common.
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Unpacking libtirpc-common (1.3.4+ds-1.3) ...
Selecting previously unselected package libtirpc3t64:arm64.
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ...
Selecting previously unselected package libnsl2:arm64.
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Unpacking libnsl2:arm64 (1.3.0-3+b3) ...
Selecting previously unselected package readline-common.
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Unpacking readline-common (8.2-5) ...
Selecting previously unselected package libreadline8t64:arm64.
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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:arm64 (8.2-5) ...
Selecting previously unselected package libpython3.12-stdlib:arm64.
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Unpacking libpython3.12-stdlib:arm64 (3.12.7-3) ...
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Setting up python3-minimal (3.12.7-1) ...
Selecting previously unselected package python3.
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Unpacking python3 (3.12.7-1) ...
Selecting previously unselected package libproc2-0:arm64.
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Unpacking libproc2-0:arm64 (2:4.0.4-6) ...
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Unpacking libmagic-mgc (1:5.45-3+b1) ...
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Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ...
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Unpacking file (1:5.45-3+b1) ...
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Unpacking gettext-base (0.22.5-2) ...
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Unpacking libuchardet0:arm64 (0.0.8-1+b2) ...
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Unpacking groff-base (1.23.0-5) ...
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Unpacking bsdextrautils (2.40.2-11) ...
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Unpacking libpipeline1:arm64 (1.5.8-1) ...
Selecting previously unselected package man-db.
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Unpacking man-db (2.13.0-1) ...
Selecting previously unselected package libedit2:arm64.
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Unpacking libedit2:arm64 (3.1-20240808-1) ...
Selecting previously unselected package libcbor0.10:arm64.
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Unpacking libcbor0.10:arm64 (0.10.2-2) ...
Selecting previously unselected package libfido2-1:arm64.
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Unpacking libfido2-1:arm64 (1.15.0-1+b1) ...
Selecting previously unselected package openssh-client.
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Unpacking openssh-client (1:9.9p1-3) ...
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Unpacking m4 (1.4.19-4) ...
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Setting up libboost-regex1.83.0:arm64 (1.83.0-3.2+b1) ...
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Setting up libbrotli1:arm64 (1.1.0-2+b6) ...
Setting up libedit2:arm64 (3.1-20240808-1) ...
Setting up libboost-system1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libuv1t64:arm64 (1.48.0-7) ...
Setting up libmagic1t64:arm64 (1:5.45-3+b1) ...
Setting up libboost-program-options1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libadios2-common-core-dev:arm64 (2.10.1+dfsg1-12) ...
Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ...
Setting up libnghttp2-14:arm64 (1.64.0-1) ...
Setting up libibumad3:arm64 (52.0-2+b1) ...
Setting up libboost-thread1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libfftw3-long3:arm64 (3.3.10-2) ...
Setting up gettext-base (0.22.5-2) ...
Setting up m4 (1.4.19-4) ...
Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libmetis5:arm64 (5.1.0.dfsg-7+b2) ...
Setting up libibmad5:arm64 (52.0-2+b1) ...
Setting up libcom-err2:arm64 (1.47.1-1+b1) ...
Setting up libldl3:arm64 (1:7.8.3+dfsg-2) ...
Setting up file (1:5.45-3+b1) ...
Setting up libboost-filesystem1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libaec0:arm64 (1.1.3-1+b1) ...
Setting up libpugixml1v5:arm64 (1.14-2) ...
Setting up libelf1t64:arm64 (0.192-4) ...
Setting up libpsl-dev:arm64 (0.21.2-1.1+b1) ...
Setting up libc6-dbg:arm64 (2.40-3) ...
Setting up libkrb5support0:arm64 (1.21.3-3) ...
Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ...
Setting up tzdata (2024b-3) ...

Current default time zone: 'Etc/UTC'
Local time is now:      Mon Nov 18 12:35:17 UTC 2024.
Universal Time is now:  Mon Nov 18 12:35:17 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up libboost-atomic1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libboost-serialization1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libbtf2:arm64 (1:7.8.3+dfsg-2) ...
Setting up libpgm-5.3-0t64:arm64 (5.3.128~dfsg-2.1+b1) ...
Setting up xtrans-dev (1.4.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:arm64 (4.13.3-1) ...
Setting up libblas3:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
Setting up libunbound8:arm64 (1.22.0-1) ...
Setting up libpkgconf3:arm64 (1.8.1-4) ...
Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-2+b2) ...
Setting up libmunge2:arm64 (0.5.15-4+b1) ...
Setting up libexpat1-dev:arm64 (2.6.4-1) ...
Setting up libjpeg62-turbo:arm64 (1:2.1.5-3+b1) ...
Setting up libgnutls-dane0t64:arm64 (3.8.8-2) ...
Setting up libboost-program-options-dev:arm64 (1.83.0.2+b2) ...
Setting up libadios2-mpi-auxiliary-dev:arm64 (2.10.1+dfsg1-12) ...
Setting up libx11-data (2:1.8.10-2) ...
Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libboost-chrono1.83.0t64:arm64 (1.83.0-3.2+b1) ...
Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libjsoncpp26:arm64 (1.9.6-2) ...
Setting up libproc2-0:arm64 (2:4.0.4-6) ...
Setting up comerr-dev:arm64 (2.1-1.47.1-1+b1) ...
Setting up libssl-dev:arm64 (3.3.2-2) ...
Setting up libpng16-16t64:arm64 (1.6.44-2) ...
Setting up libhwloc15:arm64 (2.11.2-1) ...
Setting up autopoint (0.22.5-2) ...
Setting up icu-devtools (72.1-5+b1) ...
Setting up pkgconf-bin (1.8.1-4) ...
Setting up libk5crypto3:arm64 (1.21.3-3) ...
Setting up libltdl7:arm64 (2.4.7-8) ...
Setting up opencl-c-headers (3.0~2024.05.08-1) ...
Setting up libidn2-dev:arm64 (2.3.7-2+b1) ...
Setting up libfftw3-double3:arm64 (3.3.10-2) ...
Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ...
Setting up libgfortran5:arm64 (14.2.0-8) ...
Setting up libboost-atomic1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up autoconf (2.72-3) ...
Setting up libmumps-headers-dev (5.7.3-3) ...
Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up libnuma1:arm64 (2.0.18-1+b1) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up ocl-icd-libopencl1:arm64 (2.3.2-1+b2) ...
Setting up libuchardet0:arm64 (0.0.8-1+b2) ...
Setting up procps (2:4.0.4-6) ...
Setting up libnl-3-200:arm64 (3.7.0-0.3+b1) ...
Setting up openmpi-common (5.0.5-6) ...
Setting up libsuitesparseconfig7:arm64 (1:7.8.3+dfsg-2) ...
Setting up libx11-6:arm64 (2:1.8.10-2) ...
Setting up xorg-sgml-doctools (1:1.11-1.1) ...
Setting up netbase (6.4) ...
Setting up cmake-data (3.31.0-1) ...
Setting up librhash1:arm64 (1.4.5-1) ...
Setting up libkrb5-3:arm64 (1.21.3-3) ...
Setting up libboost-dev:arm64 (1.83.0.2+b2) ...
Setting up libevent-core-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libboost-system1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libssh2-1t64:arm64 (1.11.1-1) ...
Setting up libboost-math1.83.0:arm64 (1.83.0-3.2+b1) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libfido2-1:arm64 (1.15.0-1+b1) ...
Setting up valgrind (1:3.20.0-2.1) ...
Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ...
Setting up libcatch2-dev (3.7.1-0.4) ...
Setting up libdrm-common (2.4.123-1) ...
Setting up valgrind-mpi (1:3.20.0-2.1) ...
Setting up readline-common (8.2-5) ...
Setting up libicu-dev:arm64 (72.1-5+b1) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ...
Setting up libfmt10:arm64 (10.1.1+ds1-4) ...
Setting up libp11-kit-dev:arm64 (0.25.5-2+b1) ...
Setting up libblas-dev:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
Setting up libsz2:arm64 (1.1.3-1+b1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libgfortran-14-dev:arm64 (14.2.0-8) ...
Setting up x11proto-dev (2024.1-1) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up catch2 (3.7.1-0.4) ...
Setting up liblapack3:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
Setting up gettext (0.22.5-2) ...
Setting up libarpack2t64:arm64 (3.9.1-1.1+b2) ...
Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-2+b2) ...
Setting up libamd3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libxau-dev:arm64 (1:1.0.11-1) ...
Setting up libboost-chrono1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libspdlog1.12:arm64 (1:1.12.0+ds-2+b3) ...
Setting up nettle-dev:arm64 (3.10-1+b1) ...
Setting up libyaml-dev:arm64 (0.2.5-1+b2) ...
Setting up libboost-math1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libtool (2.4.7-8) ...
Setting up libcolamd3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libspex3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libboost-chrono-dev:arm64 (1.83.0.2+b2) ...
Setting up libfftw3-bin (3.3.10-2) ...
Setting up libsuitesparse-mongoose3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libboost-math-dev:arm64 (1.83.0.2+b2) ...
Setting up libevent-openssl-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libpugixml-dev:arm64 (1.14-2) ...
Setting up libaec-dev:arm64 (1.1.3-1+b1) ...
Setting up libcxsparse4:arm64 (1:7.8.3+dfsg-2) ...
Setting up libboost-serialization1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libjpeg-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b2) ...
Setting up libboost-filesystem1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ...
Setting up libcamd3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libsuperlu7:arm64 (7.0.0+dfsg1-2) ...
Setting up pkgconf:arm64 (1.8.1-4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libnuma-dev:arm64 (2.0.18-1+b1) ...
Setting up libnl-route-3-200:arm64 (3.7.0-0.3+b1) ...
Setting up libxnvctrl0:arm64 (535.171.04-1+b1) ...
Setting up dh-autoreconf (20) ...
Setting up libltdl-dev:arm64 (2.4.7-8) ...
Setting up libxdmcp-dev:arm64 (1:1.1.2-3+b2) ...
Setting up libxml2-dev:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libboost-timer1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libllvm17t64:arm64 (1:17.0.6-18) ...
Setting up librbio4:arm64 (1:7.8.3+dfsg-2) ...
Setting up libboost-date-time1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libldap-dev:arm64 (2.5.18+dfsg-3+b1) ...
Setting up opencl-clhpp-headers (3.0~2024.05.08-1) ...
Setting up liblapack-dev:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
Setting up libeigen3-dev (3.4.0-4) ...
Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ...
Setting up libfmt-dev:arm64 (10.1.1+ds1-4) ...
Setting up libboost-regex1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libboost-serialization-dev:arm64 (1.83.0.2+b2) ...
Setting up libssh2-1-dev:arm64 (1.11.1-1) ...
Setting up libjs-sphinxdoc (7.4.7-4) ...
Setting up ocl-icd-opencl-dev:arm64 (2.3.2-1+b2) ...
Setting up libevent-extra-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libccolamd3:arm64 (1:7.8.3+dfsg-2) ...
Setting up libreadline8t64:arm64 (8.2-5) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libdrm2:arm64 (2.4.123-1) ...
Setting up libnl-3-dev:arm64 (3.7.0-0.3+b1) ...
Setting up libbasix0.9:arm64 (0.9.0-2+b1) ...
Setting up groff-base (1.23.0-5) ...
Setting up gfortran-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libhwloc-dev:arm64 (2.11.2-1) ...
Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b2) ...
Setting up gfortran-14 (14.2.0-8) ...
Setting up libsuperlu-dev:arm64 (7.0.0+dfsg1-2) ...
Setting up libbasix-dev:arm64 (0.9.0-2+b1) ...
Setting up libarchive13t64:arm64 (3.7.4-1.1) ...
Setting up libfftw3-dev:arm64 (3.3.10-2) ...
Setting up libboost-timer-dev:arm64 (1.83.0.2+b2) ...
Setting up libboost-filesystem-dev:arm64 (1.83.0.2+b2) ...
Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ...
Setting up libboost-thread1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up libgnutls28-dev:arm64 (3.8.8-2) ...
Setting up libnghttp2-dev:arm64 (1.64.0-1) ...
Setting up libibverbs1:arm64 (52.0-2+b1) ...
Setting up libcholmod5:arm64 (1:7.8.3+dfsg-2) ...
Setting up libarpack2-dev:arm64 (3.9.1-1.1+b2) ...
Setting up libxcb1-dev:arm64 (1.17.0-2+b1) ...
Setting up libzmq5:arm64 (4.3.5-1+b3) ...
Setting up libcurl4t64:arm64 (8.11.0-1) ...
Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ...
Setting up ibverbs-providers:arm64 (52.0-2+b1) ...
Setting up libspqr4:arm64 (1:7.8.3+dfsg-2) ...
Setting up libboost-iostreams1.83-dev:arm64 (1.83.0-3.2+b1) ...
Setting up openssh-client (1:9.9p1-3) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libx11-dev:arm64 (2:1.8.10-2) ...
Setting up libboost-iostreams-dev:arm64 (1.83.0.2+b2) ...
Setting up libhwloc-plugins:arm64 (2.11.2-1) ...
Setting up libspdlog-dev:arm64 (1:1.12.0+ds-2+b3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:14.2.0-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libnl-route-3-dev:arm64 (3.7.0-0.3+b1) ...
Setting up libklu2:arm64 (1:7.8.3+dfsg-2) ...
Setting up libgssrpc4t64:arm64 (1.21.3-3) ...
Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libevent-dev (2.1.12-stable-10+b1) ...
Setting up libpmix2t64:arm64 (5.0.3-2+b1) ...
Setting up libumfpack6:arm64 (1:7.8.3+dfsg-2) ...
Setting up libnsl2:arm64 (1.3.0-3+b3) ...
Setting up cmake (3.31.0-1) ...
Setting up librdmacm1t64:arm64 (52.0-2+b1) ...
Setting up libpmix-dev:arm64 (5.0.3-2+b1) ...
Setting up libhsakmt1:arm64 (6.1.2+ds-1) ...
Setting up libboost-thread-dev:arm64 (1.83.0.2+b2) ...
Setting up libkadm5clnt-mit12:arm64 (1.21.3-3) ...
Setting up libfabric1:arm64 (1.17.0-3.1) ...
Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ...
Setting up libkdb5-10t64:arm64 (1.21.3-3) ...
Setting up python3.12 (3.12.7-3) ...
Setting up debhelper (13.20) ...
Setting up libibverbs-dev:arm64 (52.0-2+b1) ...
Setting up libparu1:arm64 (1:7.8.3+dfsg-2) ...
Setting up libpython3.12t64:arm64 (3.12.7-3) ...
Setting up libhsa-runtime64-1:arm64 (6.1.2-2) ...
Setting up libkadm5srv-mit12:arm64 (1.21.3-3) ...
Setting up libpython3-stdlib:arm64 (3.12.7-1) ...
Setting up krb5-multidev:arm64 (1.21.3-3) ...
Setting up libsuitesparse-dev:arm64 (1:7.8.3+dfsg-2) ...
Setting up python3 (3.12.7-1) ...
/usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l'
  axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence')
/usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l'
  axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence')
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d'
  print("\documentclass{article}")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c'
  print("\centering")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m'
  print(" &  & \multicolumn{4}{c}{--------------- Percent of -------------} &  \\\\")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h'
  print("\hline")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e'
  print("\end{tabular}")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e'
  print("\end{table}")
/usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e'
  print("\end{document}")
Setting up libpython3.12-dev:arm64 (3.12.7-3) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up libkrb5-dev:arm64 (1.21.3-3) ...
Setting up libamdhip64-5 (5.7.1-5) ...
Setting up libcurl4-openssl-dev:arm64 (8.11.0-1) ...
Setting up python3.12-dev (3.12.7-3) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up python3-cffi-backend:arm64 (1.17.1-2+b1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up libucx0:arm64 (1.17.0+ds-3) ...
Setting up libpython3-dev:arm64 (3.12.7-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up python3-ply (3.11-7) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up python3-pycparser (2.22-2) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.12.7-1) ...
Setting up libopenmpi3t64:arm64 (5.0.5-6) ...
Setting up libparpack2t64:arm64 (3.9.1-1.1+b2) ...
Setting up libboost-mpi1.83.0 (1.83.0-3.2+b1) ...
Setting up openmpi-bin (5.0.5-6) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up libptscotch-7.0:arm64 (7.0.5-1) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up python3-cffi (1.17.1-2) ...
Setting up mpi-default-bin (1.17) ...
Setting up libcombblas2.0.0t64:arm64 (2.0.0-6) ...
Setting up libfftw3-mpi3:arm64 (3.3.10-2) ...
Setting up libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4) ...
Setting up python3-numpy (1:1.26.4+ds-12) ...
Setting up libhdf5-openmpi-fortran-102t64:arm64 (1.10.10+repack-4) ...
Setting up libhdf5-openmpi-cpp-103-1t64:arm64 (1.10.10+repack-4) ...
Setting up libopenmpi-dev:arm64 (5.0.5-6) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode
update-alternatives: warning: skip creation of /usr/lib/aarch64-linux-gnu/libmpi.so because associated file /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so (of link group mpi-aarch64-linux-gnu) doesn't exist
Setting up libscalapack-openmpi2.2:arm64 (2.2.1-5) ...
Setting up python3-ufl (2024.2.0-2) ...
Setting up libsuperlu-dist8:arm64 (8.2.1+dfsg1-5) ...
Setting up libfftw3-mpi-dev:arm64 (3.3.10-2) ...
Setting up libhdf5-openmpi-hl-100t64:arm64 (1.10.10+repack-4) ...
Setting up libsuperlu-dist-dev:arm64 (8.2.1+dfsg1-5) ...
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update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
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I: Building the package
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I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../fenicsx-performance-tests_0.9.0-2_source.changes
dpkg-buildpackage: info: source package fenicsx-performance-tests
dpkg-buildpackage: info: source version 0.9.0-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Francesco Ballarin <francesco.ballarin@unicatt.it>
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make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0'
dh_auto_configure -- -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF
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This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost 1.83.0 at /usr/lib/aarch64-linux-gnu/cmake/Boost-1.83.0
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[100%] Linking CXX executable dolfinx-scaling-test
/usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1
/usr/bin/c++ -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/aarch64-linux-gnu/openmpi/lib -Wl,--dependency-file,CMakeFiles/dolfinx-scaling-test.dir/link.d "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test  /usr/lib/aarch64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/aarch64-linux-gnu/libboost_program_options.so.1.83.0 -lpthread /usr/lib/aarch64-linux-gnu/libpugixml.so.1.14 /usr/lib/aarch64-linux-gnu/libbasix.so.0.9.0 /usr/lib/aarch64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/aarch64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/aarch64-linux-gnu/libfmt.so.10.1.0 /usr/lib/aarch64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/aarch64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib/libpetsc_real.so
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==== elasticity weak scaling (3 processes with ndofs=10000) ====
[2024-11-19 02:36:48.307] [RANK: 0] [info] Using partitioner with 69312 cell data
[2024-11-19 02:36:48.307] [RANK: 0] [info] Compute partition of cells across ranks
[2024-11-19 02:36:48.307] [RANK: 0] [info] Building mesh dual graph
[2024-11-19 02:36:48.307] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:36:48.343] [RANK: 0] [info] Build nonlocal part of mesh dual graph
[2024-11-19 02:36:48.343] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:36:48.343] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:36:48.343] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666
[2024-11-19 02:36:48.421] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962)
[2024-11-19 02:36:48.421] [RANK: 0] [info] Compute graph partition using PT-SCOTCH
[2024-11-19 02:37:00.510] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:00.548] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:00.609] [RANK: 0] [info] Extract basic topology: 68572->68572
[2024-11-19 02:37:00.609] [RANK: 0] [info] Build local dual graph
[2024-11-19 02:37:00.609] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:00.645] [RANK: 0] [info] GPS pseudo-diameter:(122) 16500-1191
[2024-11-19 02:37:00.647] [RANK: 0] [info] Create topology (single cell type)
[2024-11-19 02:37:00.656] [RANK: 0] [info] Create topology (generalised)
[2024-11-19 02:37:00.676] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:00.700] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:00.811] [RANK: 0] [info] Compute ghost indices
[2024-11-19 02:37:00.816] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0
[2024-11-19 02:37:00.828] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0
[2024-11-19 02:37:00.901] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:00.916] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:01.099] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.132] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:01.168] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.192] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:01.252] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:01.276] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:01.276] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0
[2024-11-19 02:37:01.313] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.336] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:01.336] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666
[2024-11-19 02:37:01.445] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:01.445] [RANK: 0] [info] Cell type: 0 dofmap: 17143x4
[2024-11-19 02:37:01.446] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:01.446] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:01.446] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:01.576] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.600] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
UnitCube (24x19x19) to be refined 0 times
[2024-11-19 02:37:01.685] [RANK: 0] [info] Computing mesh entities of dimension 2
[2024-11-19 02:37:01.712] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.732] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:01.913] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:01.944] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:01.977] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:37:01.977] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose.
[2024-11-19 02:37:01.978] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:01.978] [RANK: 0] [info] Cell type: 0 dofmap: 17143x4
[2024-11-19 02:37:01.980] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:01.980] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:01.985] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:02.053] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:02.053] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:02.113] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:02.113] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:02.113] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0)
[2024-11-19 02:37:02.134] [RANK: 0] [info] Column ghost size increased from 224 to 573
----------------------------------------------------------------
Test problem summary
  dolfinx version: 0.9.0
  dolfinx hash:    debian_1:0.9.0-3
  ufl hash:        475c28073ccb3c02130118a9af65e8309bf276c3
  petsc version:   Petsc Release Version 3.21.6, Sep 28, 2024 
  Problem type:    elasticity
  Scaling type:    weak
  Num processes:   3
  Num cells:       51984 (52 thousand)
  Total degrees of freedom:               30000 (30 thousand)
  Average degrees of freedom per process: 10000
----------------------------------------------------------------
[2024-11-19 02:37:02.413] [RANK: 0] [info] PETSc Krylov solver starting to solve system.
KSP Object: 3 MPI processes
  type: cg
  maximum iterations=10000, initial guess is zero
  tolerances: relative=1e-08, absolute=1e-50, divergence=10000.
  left preconditioning
  using PRECONDITIONED norm type for convergence test
PC Object: 3 MPI processes
  type: gamg
    type is MULTIPLICATIVE, levels=3 cycles=v
      Cycles per PCApply=1
      Using externally compute Galerkin coarse grid matrices
      GAMG specific options
        Threshold for dropping small values in graph on each level =   -1.   -1.   -1.  
        Threshold scaling factor for each level not specified = 1.
        AGG specific options
          Number of levels of aggressive coarsening 1
          Square graph aggressive coarsening
          Number smoothing steps 1
        Complexity:    grid = 1.0956    operator = 1.39212
  Coarse grid solver -- level 0 -------------------------------
    KSP Object: (mg_coarse_) 3 MPI processes
      type: preonly
      maximum iterations=10000, initial guess is zero
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_coarse_) 3 MPI processes
      type: bjacobi
        number of blocks = 3
        Local solver information for first block is in the following KSP and PC objects on rank 0:
        Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks
        KSP Object: (mg_coarse_sub_) 1 MPI process
          type: preonly
          maximum iterations=1, initial guess is zero
          tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
          left preconditioning
          using NONE norm type for convergence test
        PC Object: (mg_coarse_sub_) 1 MPI process
          type: lu
            out-of-place factorization
            tolerance for zero pivot 2.22045e-14
            using diagonal shift on blocks to prevent zero pivot [INBLOCKS]
            matrix ordering: nd
            factor fill ratio given 5., needed 1.10345
              Factored matrix follows:
                Mat Object: (mg_coarse_sub_) 1 MPI process
                  type: seqaij
                  rows=252, cols=252, bs=6
                  package used to perform factorization: petsc
                  total: nonzeros=55296, allocated nonzeros=55296
                    using I-node routines: found 75 nodes, limit used is 5
          linear system matrix = precond matrix:
          Mat Object: (mg_coarse_sub_) 1 MPI process
            type: seqaij
            rows=252, cols=252, bs=6
            total: nonzeros=50112, allocated nonzeros=50112
            total number of mallocs used during MatSetValues calls=0
              using I-node routines: found 83 nodes, limit used is 5
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=252, cols=252, bs=6
        total: nonzeros=50112, allocated nonzeros=50112
        total number of mallocs used during MatSetValues calls=0
          using I-node (on process 0) routines: found 83 nodes, limit used is 5
  Down solver (pre-smoother) on level 1 -------------------------------
    KSP Object: (mg_levels_1_) 3 MPI processes
      type: chebyshev
        Chebyshev polynomial of first kind
        eigenvalue targets used: min 0.277377, max 3.05115
        eigenvalues provided (min 0.0775924, max 2.77377) with transform: [0. 0.1; 0. 1.1]
      maximum iterations=2, nonzero initial guess
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_levels_1_) 3 MPI processes
      type: jacobi
        type DIAGONAL
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=2616, cols=2616, bs=6
        total: nonzeros=440640, allocated nonzeros=440640
        total number of mallocs used during MatSetValues calls=0
          using scalable MatPtAP() implementation
          using I-node (on process 0) routines: found 276 nodes, limit used is 5
  Up solver (post-smoother) same as down solver (pre-smoother)
  Down solver (pre-smoother) on level 2 -------------------------------
    KSP Object: (mg_levels_2_) 3 MPI processes
      type: chebyshev
        Chebyshev polynomial of first kind
        eigenvalue targets used: min 0.258404, max 2.84244
        eigenvalues provided (min 0.0735695, max 2.58404) with transform: [0. 0.1; 0. 1.1]
      maximum iterations=2, nonzero initial guess
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_levels_2_) 3 MPI processes
      type: jacobi
        type DIAGONAL
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=30000, cols=30000, bs=3
        total: nonzeros=1251522, allocated nonzeros=1251522
        total number of mallocs used during MatSetValues calls=0
          has attached near null space
          using I-node (on process 0) routines: found 3351 nodes, limit used is 5
  Up solver (post-smoother) same as down solver (pre-smoother)
  linear system matrix = precond matrix:
  Mat Object: 3 MPI processes
    type: mpiaij
    rows=30000, cols=30000, bs=3
    total: nonzeros=1251522, allocated nonzeros=1251522
    total number of mallocs used during MatSetValues calls=0
      has attached near null space
      using I-node (on process 0) routines: found 3351 nodes, limit used is 5

[MPI_MAX] Summary of timings                                                |  reps   wall avg   wall tot
---------------------------------------------------------------------------------------------------------
Build BoxMesh (tetrahedra)                                                  |     1  13.390000  13.390000
Build dofmap data                                                           |     2   0.145000   0.290000
Build sparsity                                                              |     1   0.020000   0.020000
Compute connectivity 2-0                                                    |     1   0.000000   0.000000
Compute dof reordering map                                                  |     2   0.000000   0.000000
Compute entities of dim = 2                                                 |     1   0.290000   0.290000
Compute graph partition (SCOTCH)                                            |     1  12.090000  12.090000
Compute local part of mesh dual graph (mixed)                               |     2   0.030000   0.060000
Compute local-to-local map                                                  |     1   0.000000   0.000000
Compute non-local part of mesh dual graph                                   |     1   0.090000   0.090000
Compute-local-to-global links for global/local adjacency list               |     1   0.000000   0.000000
Distribute fixed-degree adjacency list to destination ranks                 |     1   0.110000   0.110000
Distribute row-wise data (scalable)                                         |     1   0.190000   0.190000
GPS: create_level_structure                                                 |     4   0.002500   0.010000
Gibbs-Poole-Stockmeyer ordering                                             |     1   0.010000   0.010000
Init MPI                                                                    |     1   0.520000   0.520000
Init PETSc                                                                  |     1   0.040000   0.040000
Init dofmap from element dofmap                                             |     2   0.000000   0.000000
Init logging                                                                |     1   0.000000   0.000000
PETSc Krylov solver                                                         |     1   3.000000   3.000000
SCOTCH: call SCOTCH_dgraphBuild                                             |     1   0.010000   0.010000
SCOTCH: call SCOTCH_dgraphPart                                              |     1  12.080000  12.080000
SparsityPattern::finalize                                                   |     1   0.010000   0.010000
Topology: create                                                            |     1   0.600000   0.600000
Topology: determine shared index ownership                                  |     1   0.160000   0.160000
Topology: determine vertex ownership groups (owned, undetermined, unowned)  |     1   0.000000   0.000000
ZZZ Assemble matrix                                                         |     1   0.210000   0.210000
ZZZ Assemble vector                                                         |     1   0.010000   0.010000
ZZZ Create Mesh                                                             |     1  13.390000  13.390000
ZZZ Create RHS function                                                     |     1   0.010000   0.010000
ZZZ Create boundary conditions                                              |     1   0.060000   0.060000
ZZZ Create facets and facet->cell connectivity                              |     1   0.290000   0.290000
ZZZ Create forms                                                            |     1   0.000000   0.000000
ZZZ Create near-nullspace                                                   |     1   0.040000   0.040000
ZZZ FunctionSpace                                                           |     1   0.080000   0.080000
ZZZ Solve                                                                   |     1   3.000000   3.000000
*** Number of Krylov iterations: 18
*** Solution norm:  3.6795e-05
****************************************************************************************************************************************************************
***                                WIDEN YOUR WINDOW TO 160 CHARACTERS.  Use 'enscript -r -fCourier9' to print this document                                 ***
****************************************************************************************************************************************************************

------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------

/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-aarch64-linux-gnu/dolfinx-scaling-test on a  named i-capture-the-hostname with 3 processes, by pbuilder2 on Tue Nov 19 02:37:05 2024
Using Petsc Release Version 3.21.6, Sep 28, 2024 

                         Max       Max/Min     Avg       Total
Time (sec):           1.712e+01     1.000   1.712e+01
Objects:              0.000e+00     0.000   0.000e+00
Flops:                2.193e+08     1.062   2.109e+08  6.327e+08
Flops/sec:            1.281e+07     1.062   1.232e+07  3.696e+07
MPI Msg Count:        7.960e+02     1.040   7.757e+02  2.327e+03
MPI Msg Len (bytes):  7.831e+06     1.506   8.154e+03  1.897e+07
MPI Reductions:       4.760e+02     1.000

Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract)
                            e.g., VecAXPY() for real vectors of length N --> 2N flops
                            and VecAXPY() for complex vectors of length N --> 8N flops

Summary of Stages:   ----- Time ------  ----- Flop ------  --- Messages ---  -- Message Lengths --  -- Reductions --
                        Avg     %Total     Avg     %Total    Count   %Total     Avg         %Total    Count   %Total
 0:      Main Stage: 1.7121e+01 100.0%  6.3274e+08 100.0%  2.327e+03 100.0%  8.154e+03      100.0%  4.580e+02  96.2%

------------------------------------------------------------------------------------------------------------------------
See the 'Profiling' chapter of the users' manual for details on interpreting output.
Phase summary info:
   Count: number of times phase was executed
   Time and Flop: Max - maximum over all processors
                  Ratio - ratio of maximum to minimum over all processors
   Mess: number of messages sent
   AvgLen: average message length (bytes)
   Reduct: number of global reductions
   Global: entire computation
   Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop().
      %T - percent time in this phase         %F - percent flop in this phase
      %M - percent messages in this phase     %L - percent message lengths in this phase
      %R - percent reductions in this phase
   Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors)
------------------------------------------------------------------------------------------------------------------------
Event                Count      Time (sec)     Flop                              --- Global ---  --- Stage ----  Total
                   Max Ratio  Max     Ratio   Max  Ratio  Mess   AvgLen  Reduct  %T %F %M %L %R  %T %F %M %L %R Mflop/s
------------------------------------------------------------------------------------------------------------------------

--- Event Stage 0: Main Stage

BuildTwoSided        111 1.0 4.0656e-01 1.4 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02  2  0  8  0 23   2  0  8  0 24     0
BuildTwoSidedF        84 1.0 2.5067e-01 1.6 0.00e+00 0.0 1.1e+02 4.9e+04 8.4e+01  1  0  5 29 18   1  0  5 29 18     0
MatMult              190 1.0 6.6979e-01 1.2 1.17e+08 1.1 1.1e+03 5.8e+03 0.0e+00  4 53 49 35  0   4 53 49 35  0   497
MatMultAdd            38 1.0 4.4796e-02 1.4 9.58e+06 1.1 1.5e+02 1.6e+03 0.0e+00  0  4  7  1  0   0  4  7  1  0   622
MatMultTranspose      38 1.0 1.2444e-01 1.3 9.59e+06 1.1 1.5e+02 1.6e+03 0.0e+00  1  4  7  1  0   1  4  7  1  0   224
MatSolve              19 0.0 2.1622e-03 0.0 2.10e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0   970
MatLUFactorSym         1 1.0 1.9691e-03 213.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatLUFactorNum         1 1.0 1.1127e-02 5248.4 7.70e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0   692
MatScale               6 1.0 1.2415e-02 1.0 6.07e+05 1.1 1.2e+01 1.6e+03 0.0e+00  0  0  1  0  0   0  0  1  0  0   142
MatResidual           38 1.0 1.4824e-01 1.2 2.27e+07 1.1 2.3e+02 5.5e+03 0.0e+00  1 10 10  7  0   1 10 10  7  0   434
MatAssemblyBegin      47 1.0 2.8372e-01 1.6 0.00e+00 0.0 1.1e+02 4.9e+04 2.4e+01  1  0  5 29  5   1  0  5 29  5     0
MatAssemblyEnd        47 1.0 6.0478e-01 1.0 8.40e+04 1.6 1.8e+02 4.9e+02 9.5e+01  3  0  8  0 20   3  0  8  0 21     0
MatGetRowIJ            1 0.0 5.0080e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatCreateSubMat        2 1.0 2.3733e-02 1.0 0.00e+00 0.0 1.4e+01 3.2e+04 3.0e+01  0  0  1  2  6   0  0  1  2  7     0
MatGetOrdering         1 0.0 1.1588e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatCoarsen             2 1.0 1.3274e-01 1.0 0.00e+00 0.0 1.2e+02 8.4e+02 3.7e+01  1  0  5  1  8   1  0  5  1  8     0
MatZeroEntries         2 1.0 5.8961e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatView                6 1.5 3.4385e-02 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00  0  0  0  0  1   0  0  0  0  1     0
MatAXPY                4 1.0 1.2108e-01 1.3 1.18e+05 1.0 2.4e+01 4.1e+02 1.4e+01  1  0  1  0  3   1  0  1  0  3     3
MatTranspose           9 1.0 1.5777e-01 1.1 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01  1  0  5  1  6   1  0  5  1  6     0
MatMatMultSym          6 1.0 2.9696e-01 1.1 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01  2  0  3  3  4   2  0  3  3  4     0
MatMatMultNum          2 1.0 5.6866e-02 1.1 7.16e+06 1.1 1.2e+01 3.3e+04 2.0e+00  0  3  1  2  0   0  3  1  2  0   357
MatPtAPSymbolic        2 1.0 3.9370e-01 1.0 0.00e+00 0.0 7.2e+01 5.0e+04 1.4e+01  2  0  3 19  3   2  0  3 19  3     0
MatPtAPNumeric         2 1.0 4.8287e-01 1.0 6.37e+07 1.2 4.8e+01 6.3e+04 1.2e+01  3 28  2 16  3   3 28  2 16  3   365
MatTrnMatMultSym       1 1.0 9.4771e-02 1.1 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01  1  0  2  7  3   1  0  2  7  3     0
MatGetLocalMat         7 1.0 1.4627e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatGetBrAoCol          6 1.0 7.8075e-02 1.2 0.00e+00 0.0 8.4e+01 4.6e+04 0.0e+00  0  0  4 20  0   0  0  4 20  0     0
VecMDot               20 1.0 1.2413e-02 13.3 1.22e+06 1.0 0.0e+00 0.0e+00 2.0e+01  0  1  0  0  4   0  1  0  0  4   289
VecTDot               38 1.0 2.1094e-01 1.9 7.65e+05 1.0 0.0e+00 0.0e+00 3.8e+01  1  0  0  0  8   1  0  0  0  8    11
VecNorm               41 1.0 3.9968e-02 2.7 6.26e+05 1.0 0.0e+00 0.0e+00 4.1e+01  0  0  0  0  9   0  0  0  0  9    46
VecScale              22 1.0 5.7401e-05 1.1 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  6250
VecCopy              118 1.0 3.0889e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecSet               134 1.0 1.5248e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecAXPY               38 1.0 4.6232e-04 1.2 7.47e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  4813
VecAYPX              245 1.0 1.4877e-03 1.0 2.03e+06 1.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  4018
VecAXPBYCZ            76 1.0 6.0000e-04 1.1 2.10e+06 1.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0 10328
VecMAXPY              22 1.0 3.2744e-04 1.1 1.44e+06 1.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0 12949
VecAssemblyBegin      61 1.0 3.1716e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01  0  0  0  0 13   0  0  0  0 13     0
VecAssemblyEnd        61 1.0 3.0200e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecPointwiseMult     174 1.0 1.1676e-03 1.0 9.64e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  2430
VecScatterBegin      330 1.0 3.1518e-03 1.3 0.00e+00 0.0 1.7e+03 4.6e+03 0.0e+00  0  0 74 41  0   0  0 74 41  0     0
VecScatterEnd        330 1.0 6.8209e-01 1.3 1.29e+04 1.6 0.0e+00 0.0e+00 0.0e+00  4  0  0  0  0   4  0  0  0  0     0
VecNormalize          22 1.0 1.6067e-02 55.0 3.65e+05 1.0 0.0e+00 0.0e+00 2.2e+01  0  0  0  0  5   0  0  0  0  5    67
SFSetGraph            27 1.0 1.4572e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetUp               27 1.0 2.4518e-01 1.2 0.00e+00 0.0 2.7e+02 4.8e+02 2.7e+01  1  0 11  1  6   1  0 11  1  6     0
SFBcastBegin           9 1.0 8.9241e-05 1.2 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00  0  0  2  0  0   0  0  2  0  0     0
SFBcastEnd             9 1.0 4.7914e-02 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFReduceBegin          3 1.0 6.1601e-05 1.1 0.00e+00 0.0 1.5e+01 6.6e+02 0.0e+00  0  0  1  0  0   0  0  1  0  0     0
SFReduceEnd            3 1.0 1.1995e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFPack               342 1.0 6.3368e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFUnpack             342 1.0 2.4144e-04 1.6 1.29e+04 1.6 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0   123
KSPSetUp               7 1.0 1.2188e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSolve               1 1.0 9.5325e-01 1.0 1.31e+08 1.1 1.3e+03 4.9e+03 7.6e+01  6 61 57 34 16   6 61 57 34 17   404
KSPGMRESOrthog        20 1.0 1.2736e-02 10.3 2.44e+06 1.0 0.0e+00 0.0e+00 2.0e+01  0  1  0  0  4   0  1  0  0  4   563
PCSetUp_GAMG+          1 1.0 1.9912e+00 1.0 8.65e+07 1.2 9.4e+02 1.2e+04 3.3e+02 12 38 40 60 69  12 38 40 60 72   121
 PCGAMGCreateG         2 1.0 3.8866e-01 1.1 1.55e+05 1.0 1.4e+02 1.6e+03 5.0e+01  2  0  6  1 11   2  0  6  1 11     1
 GAMG Coarsen          4 1.0 2.2928e-01 1.0 0.00e+00 0.0 1.9e+02 8.1e+03 5.4e+01  1  0  8  8 11   1  0  8  8 12     0
  GAMG MIS/Agg         2 1.0 2.2793e-01 1.0 0.00e+00 0.0 1.6e+02 8.8e+03 5.0e+01  1  0  7  7 11   1  0  7  7 11     0
 PCGAMGProl            2 1.0 4.7679e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01  0  0 11  4 16   0  0 11  4 17     0
  GAMG Prol-col        2 1.0 2.5460e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01  0  0 10  3 12   0  0 10  3 12     0
  GAMG Prol-lift       2 1.0 4.4926e-02 1.0 0.00e+00 0.0 3.6e+01 6.5e+03 1.2e+01  0  0  2  1  3   0  0  2  1  3     0
 PCGAMGOptProl         2 1.0 3.9452e-01 1.0 2.27e+07 1.1 1.9e+02 8.8e+03 6.6e+01  2 10  8  9 14   2 10  8  9 14   164
  GAMG smooth          2 1.0 3.4281e-01 1.1 7.73e+06 1.1 7.2e+01 1.4e+04 2.4e+01  2  3  3  5  5   2  3  3  5  5    64
 PCGAMGCreateL         2 1.0 9.1743e-01 1.0 6.37e+07 1.2 1.5e+02 4.7e+04 8.1e+01  5 28  6 37 17   5 28  6 37 18   192
  GAMG PtAP            2 1.0 8.6815e-01 1.0 6.37e+07 1.2 1.2e+02 5.5e+04 2.6e+01  5 28  5 35  5   5 28  5 35  6   203
  GAMG Reduce          1 1.0 5.2075e-02 1.1 0.00e+00 0.0 2.9e+01 1.6e+04 5.5e+01  0  0  1  2 12   0  0  1  2 12     0
PCGAMG Squ l00         1 1.0 9.4775e-02 1.1 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01  1  0  2  7  3   1  0  2  7  3     0
PCGAMG Gal l00         1 1.0 6.0424e-01 1.0 3.98e+07 1.1 6.0e+01 7.5e+04 1.3e+01  3 18  3 24  3   3 18  3 24  3   193
PCGAMG Opt l00         1 1.0 1.5915e-01 1.1 5.04e+06 1.0 3.6e+01 2.2e+04 1.1e+01  1  2  2  4  2   1  2  2  4  2    94
PCGAMG Gal l01         1 1.0 2.6798e-01 1.0 2.39e+07 1.6 6.0e+01 3.5e+04 1.3e+01  2  9  3 11  3   2  9  3 11  3   223
PCGAMG Opt l01         1 1.0 1.5236e-01 1.0 2.12e+06 1.4 3.6e+01 6.6e+03 1.1e+01  1  1  2  1  2   1  1  2  1  2    35
PCSetUp                2 1.0 1.9945e+00 1.0 8.65e+07 1.1 9.4e+02 1.2e+04 3.3e+02 12 39 40 60 69  12 39 40 60 72   125
PCSetUpOnBlocks       19 1.0 1.3381e-02 78.7 7.70e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0   576
PCApply               19 1.0 6.6774e-01 1.1 1.14e+08 1.1 1.2e+03 4.5e+03 1.9e+01  4 53 52 29  4   4 53 52 29  4   500
------------------------------------------------------------------------------------------------------------------------

Object Type          Creations   Destructions. Reports information only for process 0.

--- Event Stage 0: Main Stage

           Container    11             11
              Matrix    86             86
      Matrix Coarsen     2              2
   Matrix Null Space     1              1
           Index Set    66             66
   IS L to G Mapping     5              5
              Vector   183            183
   Star Forest Graph    35             35
       Krylov Solver     7              7
      Preconditioner     7              7
              Viewer     2              2
         PetscRandom     2              2
    Distributed Mesh     4              4
     Discrete System     4              4
           Weak Form     4              4
========================================================================================================================
Average time to get PetscTime(): 3.2e-08
Average time for MPI_Barrier(): 1.456e-06
Average time for zero size MPI_Send(): 1e-06
#PETSc Option Table entries:
--ndofs 10000 # (source: command line)
--problem_type elasticity # (source: command line)
--scaling_type weak # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-matptap_via scalable # (source: command line)
-mg_levels_esteig_ksp_type cg # (source: command line)
-mg_levels_ksp_type chebyshev # (source: command line)
-mg_levels_pc_type jacobi # (source: command line)
-options_left # (source: command line)
-pc_gamg_coarse_eq_limit 1000 # (source: command line)
-pc_type gamg # (source: command line)
#End of PETSc Option Table entries
Compiled without FORTRAN kernels
Compiled with full precision matrices (default)
sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4
Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w
-----------------------------------------
Libraries compiled on 2024-10-20 10:17:39 on reproducible 
Machine characteristics: Linux-6.1.0-27-arm64-aarch64-with-glibc2.40
Using PETSc directory: /usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real
Using PETSc arch: 
-----------------------------------------

Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 
Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0    -Wdate-time -D_FORTIFY_SOURCE=2
-----------------------------------------

Using include paths: -I/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi
-----------------------------------------

Using C linker: mpicc
Using Fortran linker: mpif90
Using libraries: -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/gcc/aarch64-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++
-----------------------------------------

#PETSc Option Table entries:
--ndofs 10000 # (source: command line)
--problem_type elasticity # (source: command line)
--scaling_type weak # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-matptap_via scalable # (source: command line)
-mg_levels_esteig_ksp_type cg # (source: command line)
-mg_levels_ksp_type chebyshev # (source: command line)
-mg_levels_pc_type jacobi # (source: command line)
-options_left # (source: command line)
-pc_gamg_coarse_eq_limit 1000 # (source: command line)
-pc_type gamg # (source: command line)
#End of PETSc Option Table entries
WARNING! There are options you set that were not used!
WARNING! could be spelling mistake, etc!
There are 4 unused database options. They are:
Option left: name:--ndofs value: 10000 source: command line
Option left: name:--problem_type value: elasticity source: command line
Option left: name:--scaling_type value: weak source: command line
Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line
==== elasticity strong scaling (3 processes with ndofs=30000) ====
[2024-11-19 02:37:06.097] [RANK: 0] [info] Using partitioner with 69312 cell data
[2024-11-19 02:37:06.101] [RANK: 0] [info] Compute partition of cells across ranks
[2024-11-19 02:37:06.101] [RANK: 0] [info] Building mesh dual graph
[2024-11-19 02:37:06.101] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:06.125] [RANK: 0] [info] Build nonlocal part of mesh dual graph
[2024-11-19 02:37:06.141] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:06.156] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:06.157] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666
[2024-11-19 02:37:06.221] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962)
[2024-11-19 02:37:06.221] [RANK: 0] [info] Compute graph partition using PT-SCOTCH
[2024-11-19 02:37:18.273] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:18.320] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:18.381] [RANK: 0] [info] Extract basic topology: 69312->69312
[2024-11-19 02:37:18.381] [RANK: 0] [info] Build local dual graph
[2024-11-19 02:37:18.384] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:18.412] [RANK: 0] [info] GPS pseudo-diameter:(118) 16890-1272
[2024-11-19 02:37:18.422] [RANK: 0] [info] Create topology (single cell type)
[2024-11-19 02:37:18.422] [RANK: 0] [info] Create topology (generalised)
[2024-11-19 02:37:18.432] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:18.456] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:18.579] [RANK: 0] [info] Compute ghost indices
[2024-11-19 02:37:18.579] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0
[2024-11-19 02:37:18.596] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0
[2024-11-19 02:37:18.681] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:18.696] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:18.899] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:18.928] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:18.960] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:18.992] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:19.056] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:19.072] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:19.072] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0
[2024-11-19 02:37:19.121] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:19.152] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:19.152] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666
[2024-11-19 02:37:19.317] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:19.317] [RANK: 0] [info] Cell type: 0 dofmap: 17328x4
[2024-11-19 02:37:19.318] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:19.328] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:19.329] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:19.420] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:19.444] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
UnitCube (24x19x19) to be refined 0 times
[2024-11-19 02:37:19.517] [RANK: 0] [info] Computing mesh entities of dimension 2
[2024-11-19 02:37:19.544] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:19.564] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:19.744] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:19.768] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:19.805] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:37:19.805] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose.
[2024-11-19 02:37:19.806] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:19.806] [RANK: 0] [info] Cell type: 0 dofmap: 17328x4
[2024-11-19 02:37:19.807] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:19.816] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:19.817] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:20.008] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:20.056] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:20.109] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:20.109] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:20.109] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0)
[2024-11-19 02:37:20.180] [RANK: 0] [info] Column ghost size increased from 229 to 585
----------------------------------------------------------------
Test problem summary
  dolfinx version: 0.9.0
  dolfinx hash:    debian_1:0.9.0-3
  ufl hash:        475c28073ccb3c02130118a9af65e8309bf276c3
  petsc version:   Petsc Release Version 3.21.6, Sep 28, 2024 
  Problem type:    elasticity
  Scaling type:    strong
  Num processes:   3
  Num cells:       51984 (52 thousand)
  Total degrees of freedom:               30000 (30 thousand)
  Average degrees of freedom per process: 10000
----------------------------------------------------------------
[2024-11-19 02:37:20.499] [RANK: 0] [info] PETSc Krylov solver starting to solve system.
KSP Object: 3 MPI processes
  type: cg
  maximum iterations=10000, initial guess is zero
  tolerances: relative=1e-08, absolute=1e-50, divergence=10000.
  left preconditioning
  using PRECONDITIONED norm type for convergence test
PC Object: 3 MPI processes
  type: gamg
    type is MULTIPLICATIVE, levels=3 cycles=v
      Cycles per PCApply=1
      Using externally compute Galerkin coarse grid matrices
      GAMG specific options
        Threshold for dropping small values in graph on each level =   -1.   -1.   -1.  
        Threshold scaling factor for each level not specified = 1.
        AGG specific options
          Number of levels of aggressive coarsening 1
          Square graph aggressive coarsening
          Number smoothing steps 1
        Complexity:    grid = 1.0928    operator = 1.37924
  Coarse grid solver -- level 0 -------------------------------
    KSP Object: (mg_coarse_) 3 MPI processes
      type: preonly
      maximum iterations=10000, initial guess is zero
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_coarse_) 3 MPI processes
      type: bjacobi
        number of blocks = 3
        Local solver information for first block is in the following KSP and PC objects on rank 0:
        Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks
        KSP Object: (mg_coarse_sub_) 1 MPI process
          type: preonly
          maximum iterations=1, initial guess is zero
          tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
          left preconditioning
          using NONE norm type for convergence test
        PC Object: (mg_coarse_sub_) 1 MPI process
          type: lu
            out-of-place factorization
            tolerance for zero pivot 2.22045e-14
            using diagonal shift on blocks to prevent zero pivot [INBLOCKS]
            matrix ordering: nd
            factor fill ratio given 5., needed 1.09129
              Factored matrix follows:
                Mat Object: (mg_coarse_sub_) 1 MPI process
                  type: seqaij
                  rows=234, cols=234, bs=6
                  package used to perform factorization: petsc
                  total: nonzeros=46476, allocated nonzeros=46476
                    using I-node routines: found 63 nodes, limit used is 5
          linear system matrix = precond matrix:
          Mat Object: (mg_coarse_sub_) 1 MPI process
            type: seqaij
            rows=234, cols=234, bs=6
            total: nonzeros=42588, allocated nonzeros=42588
            total number of mallocs used during MatSetValues calls=0
              using I-node routines: found 76 nodes, limit used is 5
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=234, cols=234, bs=6
        total: nonzeros=42588, allocated nonzeros=42588
        total number of mallocs used during MatSetValues calls=0
          using I-node (on process 0) routines: found 76 nodes, limit used is 5
  Down solver (pre-smoother) on level 1 -------------------------------
    KSP Object: (mg_levels_1_) 3 MPI processes
      type: chebyshev
        Chebyshev polynomial of first kind
        eigenvalue targets used: min 0.250765, max 2.75842
        eigenvalues provided (min 0.0266864, max 2.50765) with transform: [0. 0.1; 0. 1.1]
      maximum iterations=2, nonzero initial guess
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_levels_1_) 3 MPI processes
      type: jacobi
        type DIAGONAL
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=2550, cols=2550, bs=6
        total: nonzeros=432036, allocated nonzeros=432036
        total number of mallocs used during MatSetValues calls=0
          using scalable MatPtAP() implementation
          using I-node (on process 0) routines: found 256 nodes, limit used is 5
  Up solver (post-smoother) same as down solver (pre-smoother)
  Down solver (pre-smoother) on level 2 -------------------------------
    KSP Object: (mg_levels_2_) 3 MPI processes
      type: chebyshev
        Chebyshev polynomial of first kind
        eigenvalue targets used: min 0.25877, max 2.84647
        eigenvalues provided (min 0.0729265, max 2.5877) with transform: [0. 0.1; 0. 1.1]
      maximum iterations=2, nonzero initial guess
      tolerances: relative=1e-05, absolute=1e-50, divergence=10000.
      left preconditioning
      using NONE norm type for convergence test
    PC Object: (mg_levels_2_) 3 MPI processes
      type: jacobi
        type DIAGONAL
      linear system matrix = precond matrix:
      Mat Object: 3 MPI processes
        type: mpiaij
        rows=30000, cols=30000, bs=3
        total: nonzeros=1251522, allocated nonzeros=1251522
        total number of mallocs used during MatSetValues calls=0
          has attached near null space
          using I-node (on process 0) routines: found 3368 nodes, limit used is 5
  Up solver (post-smoother) same as down solver (pre-smoother)
  linear system matrix = precond matrix:
  Mat Object: 3 MPI processes
    type: mpiaij
    rows=30000, cols=30000, bs=3
    total: nonzeros=1251522, allocated nonzeros=1251522
    total number of mallocs used during MatSetValues calls=0
      has attached near null space
      using I-node (on process 0) routines: found 3368 nodes, limit used is 5

[MPI_MAX] Summary of timings                                                |  reps   wall avg   wall tot
---------------------------------------------------------------------------------------------------------
Build BoxMesh (tetrahedra)                                                  |     1  13.430000  13.430000
Build dofmap data                                                           |     2   0.240000   0.480000
Build sparsity                                                              |     1   0.020000   0.020000
Compute connectivity 2-0                                                    |     1   0.000000   0.000000
Compute dof reordering map                                                  |     2   0.000000   0.000000
Compute entities of dim = 2                                                 |     1   0.290000   0.290000
Compute graph partition (SCOTCH)                                            |     1  12.080000  12.080000
Compute local part of mesh dual graph (mixed)                               |     2   0.035000   0.070000
Compute local-to-local map                                                  |     1   0.000000   0.000000
Compute non-local part of mesh dual graph                                   |     1   0.100000   0.100000
Compute-local-to-global links for global/local adjacency list               |     1   0.000000   0.000000
Distribute fixed-degree adjacency list to destination ranks                 |     1   0.110000   0.110000
Distribute row-wise data (scalable)                                         |     1   0.260000   0.260000
GPS: create_level_structure                                                 |     5   0.005000   0.010000
Gibbs-Poole-Stockmeyer ordering                                             |     1   0.010000   0.010000
Init MPI                                                                    |     1   0.120000   0.120000
Init PETSc                                                                  |     1   0.010000   0.010000
Init dofmap from element dofmap                                             |     2   0.015000   0.030000
Init logging                                                                |     1   0.000000   0.000000
PETSc Krylov solver                                                         |     1   2.700000   2.700000
SCOTCH: call SCOTCH_dgraphBuild                                             |     1   0.020000   0.020000
SCOTCH: call SCOTCH_dgraphPart                                              |     1  12.060000  12.060000
SparsityPattern::finalize                                                   |     1   0.060000   0.060000
Topology: create                                                            |     1   0.640000   0.640000
Topology: determine shared index ownership                                  |     1   0.160000   0.160000
Topology: determine vertex ownership groups (owned, undetermined, unowned)  |     1   0.000000   0.000000
ZZZ Assemble matrix                                                         |     1   0.220000   0.220000
ZZZ Assemble vector                                                         |     1   0.020000   0.020000
ZZZ Create Mesh                                                             |     1  13.440000  13.440000
ZZZ Create RHS function                                                     |     1   0.010000   0.010000
ZZZ Create boundary conditions                                              |     1   0.000000   0.000000
ZZZ Create facets and facet->cell connectivity                              |     1   0.290000   0.290000
ZZZ Create forms                                                            |     1   0.000000   0.000000
ZZZ Create near-nullspace                                                   |     1   0.030000   0.030000
ZZZ FunctionSpace                                                           |     1   0.310000   0.310000
ZZZ Solve                                                                   |     1   2.700000   2.700000
*** Number of Krylov iterations: 18
*** Solution norm:  3.6795e-05
****************************************************************************************************************************************************************
***                                WIDEN YOUR WINDOW TO 160 CHARACTERS.  Use 'enscript -r -fCourier9' to print this document                                 ***
****************************************************************************************************************************************************************

------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------

/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-aarch64-linux-gnu/dolfinx-scaling-test on a  named i-capture-the-hostname with 3 processes, by pbuilder2 on Tue Nov 19 02:37:23 2024
Using Petsc Release Version 3.21.6, Sep 28, 2024 

                         Max       Max/Min     Avg       Total
Time (sec):           1.714e+01     1.000   1.714e+01
Objects:              0.000e+00     0.000   0.000e+00
Flops:                2.101e+08     1.022   2.073e+08  6.220e+08
Flops/sec:            1.226e+07     1.023   1.210e+07  3.629e+07
MPI Msg Count:        7.950e+02     1.040   7.750e+02  2.325e+03
MPI Msg Len (bytes):  7.279e+06     1.378   8.167e+03  1.899e+07
MPI Reductions:       4.760e+02     1.000

Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract)
                            e.g., VecAXPY() for real vectors of length N --> 2N flops
                            and VecAXPY() for complex vectors of length N --> 8N flops

Summary of Stages:   ----- Time ------  ----- Flop ------  --- Messages ---  -- Message Lengths --  -- Reductions --
                        Avg     %Total     Avg     %Total    Count   %Total     Avg         %Total    Count   %Total
 0:      Main Stage: 1.7138e+01 100.0%  6.2201e+08 100.0%  2.325e+03 100.0%  8.167e+03      100.0%  4.580e+02  96.2%

------------------------------------------------------------------------------------------------------------------------
See the 'Profiling' chapter of the users' manual for details on interpreting output.
Phase summary info:
   Count: number of times phase was executed
   Time and Flop: Max - maximum over all processors
                  Ratio - ratio of maximum to minimum over all processors
   Mess: number of messages sent
   AvgLen: average message length (bytes)
   Reduct: number of global reductions
   Global: entire computation
   Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop().
      %T - percent time in this phase         %F - percent flop in this phase
      %M - percent messages in this phase     %L - percent message lengths in this phase
      %R - percent reductions in this phase
   Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors)
------------------------------------------------------------------------------------------------------------------------
Event                Count      Time (sec)     Flop                              --- Global ---  --- Stage ----  Total
                   Max Ratio  Max     Ratio   Max  Ratio  Mess   AvgLen  Reduct  %T %F %M %L %R  %T %F %M %L %R Mflop/s
------------------------------------------------------------------------------------------------------------------------

--- Event Stage 0: Main Stage

BuildTwoSided        111 1.0 3.4694e-01 2.7 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02  1  0  8  0 23   1  0  8  0 24     0
BuildTwoSidedF        84 1.0 3.2700e-01 3.4 0.00e+00 0.0 1.1e+02 5.0e+04 8.4e+01  1  0  5 29 18   1  0  5 29 18     0
MatMult              190 1.0 9.2789e-01 1.1 1.12e+08 1.0 1.1e+03 5.9e+03 0.0e+00  5 53 49 35  0   5 53 49 35  0   357
MatMultAdd            38 1.0 1.6079e-01 1.1 9.29e+06 1.0 1.5e+02 1.6e+03 0.0e+00  1  4  7  1  0   1  4  7  1  0   171
MatMultTranspose      38 1.0 1.3694e-01 2.2 9.30e+06 1.0 1.5e+02 1.6e+03 0.0e+00  1  4  7  1  0   1  4  7  1  0   201
MatSolve              19 0.0 1.8218e-03 0.0 1.76e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0   967
MatLUFactorSym         1 1.0 1.2172e-03 124.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatLUFactorNum         1 1.0 2.2505e-03 1197.1 5.71e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  2535
MatScale               6 1.0 5.7116e-04 1.0 5.92e+05 1.0 1.2e+01 1.6e+03 0.0e+00  0  0  1  0  0   0  0  1  0  0  3066
MatResidual           38 1.0 1.6034e-01 1.2 2.18e+07 1.1 2.3e+02 5.6e+03 0.0e+00  1 10 10  7  0   1 10 10  7  0   399
MatAssemblyBegin      47 1.0 3.4388e-01 2.5 0.00e+00 0.0 1.1e+02 5.0e+04 2.4e+01  1  0  5 29  5   1  0  5 29  5     0
MatAssemblyEnd        47 1.0 2.0792e-01 1.3 1.02e+05 2.4 1.8e+02 5.0e+02 9.5e+01  1  0  8  0 20   1  0  8  0 21     1
MatGetRowIJ            1 0.0 4.0800e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatCreateSubMat        2 1.0 1.6510e-01 1.1 0.00e+00 0.0 1.4e+01 2.9e+04 3.0e+01  1  0  1  2  6   1  0  1  2  7     0
MatGetOrdering         1 0.0 1.0844e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatCoarsen             2 1.0 7.5509e-04 1.0 0.00e+00 0.0 1.2e+02 8.7e+02 3.7e+01  0  0  5  1  8   0  0  5  1  8     0
MatZeroEntries         2 1.0 5.5441e-05 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatView                6 1.5 4.7989e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00  0  0  0  0  1   0  0  0  0  1     0
MatAXPY                4 1.0 5.7201e-02 1.0 1.18e+05 1.0 2.4e+01 4.1e+02 1.4e+01  0  0  1  0  3   0  0  1  0  3     6
MatTranspose           9 1.0 1.2033e-02 2.9 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01  0  0  5  1  6   0  0  5  1  6     0
MatMatMultSym          6 1.0 1.0848e-01 1.5 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01  1  0  3  3  4   1  0  3  3  4     0
MatMatMultNum          2 1.0 1.6057e-02 1.1 6.89e+06 1.1 1.2e+01 3.4e+04 2.0e+00  0  3  1  2  0   0  3  1  2  0  1258
MatPtAPSymbolic        2 1.0 2.9956e-01 1.0 0.00e+00 0.0 7.2e+01 4.9e+04 1.4e+01  2  0  3 19  3   2  0  3 19  3     0
MatPtAPNumeric         2 1.0 3.2221e-01 1.0 6.05e+07 1.1 4.8e+01 6.1e+04 1.2e+01  2 27  2 15  3   2 27  2 15  3   529
MatTrnMatMultSym       1 1.0 9.8314e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01  1  0  2  7  3   1  0  2  7  3     0
MatGetLocalMat         7 1.0 1.4473e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatGetBrAoCol          6 1.0 3.3982e-02 1.1 0.00e+00 0.0 8.4e+01 4.5e+04 0.0e+00  0  0  4 20  0   0  0  4 20  0     0
VecMDot               20 1.0 2.4067e-02 11.9 1.22e+06 1.1 0.0e+00 0.0e+00 2.0e+01  0  1  0  0  4   0  1  0  0  4   149
VecTDot               38 1.0 1.6007e-01 1.9 7.79e+05 1.1 0.0e+00 0.0e+00 3.8e+01  1  0  0  0  8   1  0  0  0  8    14
VecNorm               41 1.0 1.2474e-01 1.7 6.34e+05 1.1 0.0e+00 0.0e+00 4.1e+01  1  0  0  0  9   1  0  0  0  9    15
VecScale              22 1.0 5.8560e-05 1.3 1.22e+05 1.1 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  6114
VecCopy              118 1.0 3.0156e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecSet               134 1.0 1.4572e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecAXPY               38 1.0 3.7672e-04 1.1 7.61e+05 1.1 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  5906
VecAYPX              245 1.0 1.4641e-03 1.0 2.04e+06 1.1 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  4076
VecAXPBYCZ            76 1.0 7.1852e-04 1.2 2.11e+06 1.1 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  8607
VecMAXPY              22 1.0 3.8669e-03 12.1 1.44e+06 1.1 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  1094
VecAssemblyBegin      61 1.0 8.0984e-03 27.8 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01  0  0  0  0 13   0  0  0  0 13     0
VecAssemblyEnd        61 1.0 3.7280e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecPointwiseMult     174 1.0 1.2114e-03 1.1 9.66e+05 1.1 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0  2338
VecScatterBegin      330 1.0 2.8357e-03 1.1 0.00e+00 0.0 1.7e+03 4.6e+03 0.0e+00  0  0 74 42  0   0  0 74 42  0     0
VecScatterEnd        330 1.0 1.0942e+00 1.4 1.14e+04 1.5 0.0e+00 0.0e+00 0.0e+00  6  0  0  0  0   6  0  0  0  0     0
VecNormalize          22 1.0 1.4967e-02 39.9 3.67e+05 1.1 0.0e+00 0.0e+00 2.2e+01  0  0  0  0  5   0  0  0  0  5    72
SFSetGraph            27 1.0 1.2820e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetUp               27 1.0 4.8512e-02 3.8 0.00e+00 0.0 2.7e+02 4.8e+02 2.7e+01  0  0 11  1  6   0  0 11  1  6     0
SFBcastBegin           9 1.0 3.1280e-05 1.1 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00  0  0  2  0  0   0  0  2  0  0     0
SFBcastEnd             9 1.0 4.7800e-05 2.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFReduceBegin          3 1.0 4.0640e-05 1.2 0.00e+00 0.0 1.5e+01 6.6e+02 0.0e+00  0  0  1  0  0   0  0  1  0  0     0
SFReduceEnd            3 1.0 1.6560e-05 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFPack               342 1.0 6.0988e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFUnpack             342 1.0 1.9092e-04 1.3 1.14e+04 1.5 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0   158
KSPSetUp               7 1.0 1.3832e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSolve               1 1.0 1.4037e+00 1.0 1.29e+08 1.0 1.3e+03 4.9e+03 7.6e+01  8 61 57 34 16   8 61 57 34 17   271
KSPGMRESOrthog        20 1.0 2.4388e-02 10.4 2.44e+06 1.1 0.0e+00 0.0e+00 2.0e+01  0  1  0  0  4   0  1  0  0  4   294
PCSetUp_GAMG+          1 1.0 1.2019e+00 1.0 8.25e+07 1.1 9.4e+02 1.2e+04 3.3e+02  7 38 40 59 69   7 38 40 59 72   196
 PCGAMGCreateG         2 1.0 8.6493e-02 1.0 1.54e+05 1.0 1.4e+02 1.7e+03 5.0e+01  1  0  6  1 11   1  0  6  1 11     5
 GAMG Coarsen          4 1.0 1.2040e-01 1.0 0.00e+00 0.0 1.9e+02 8.2e+03 5.4e+01  1  0  8  8 11   1  0  8  8 12     0
  GAMG MIS/Agg         2 1.0 9.9209e-02 1.0 0.00e+00 0.0 1.6e+02 8.9e+03 5.0e+01  1  0  7  7 11   1  0  7  7 11     0
 PCGAMGProl            2 1.0 2.5752e-02 1.0 0.00e+00 0.0 2.6e+02 3.3e+03 7.6e+01  0  0 11  5 16   0  0 11  5 17     0
  GAMG Prol-col        2 1.0 2.5608e-03 1.0 0.00e+00 0.0 2.2e+02 2.7e+03 5.6e+01  0  0 10  3 12   0  0 10  3 12     0
  GAMG Prol-lift       2 1.0 2.2976e-02 1.0 0.00e+00 0.0 3.6e+01 7.3e+03 1.2e+01  0  0  2  1  3   0  0  2  1  3     0
 PCGAMGOptProl         2 1.0 1.4461e-01 1.0 2.18e+07 1.0 1.9e+02 9.0e+03 6.6e+01  1 10  8  9 14   1 10  8  9 14   446
  GAMG smooth          2 1.0 8.6805e-02 1.0 7.44e+06 1.1 7.2e+01 1.5e+04 2.4e+01  0  4  3  6  5   0  4  3  6  5   252
 PCGAMGCreateL         2 1.0 7.9872e-01 1.0 6.05e+07 1.1 1.5e+02 4.6e+04 8.1e+01  5 27  6 36 17   5 27  6 36 18   213
  GAMG PtAP            2 1.0 6.2132e-01 1.0 6.05e+07 1.1 1.2e+02 5.4e+04 2.6e+01  4 27  5 34  5   4 27  5 34  6   274
  GAMG Reduce          1 1.0 1.7739e-01 1.0 0.00e+00 0.0 2.9e+01 1.5e+04 5.5e+01  1  0  1  2 12   1  0  1  2 12     0
PCGAMG Squ l00         1 1.0 9.8317e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01  1  0  2  7  3   1  0  2  7  3     0
PCGAMG Gal l00         1 1.0 4.5421e-01 1.0 3.95e+07 1.0 6.0e+01 7.7e+04 1.3e+01  3 19  3 24  3   3 19  3 24  3   256
PCGAMG Opt l00         1 1.0 6.3670e-02 1.1 5.14e+06 1.1 3.6e+01 2.2e+04 1.1e+01  0  2  2  4  2   0  2  2  4  2   236
PCGAMG Gal l01         1 1.0 1.6712e-01 1.0 2.26e+07 1.5 6.0e+01 3.0e+04 1.3e+01  1  9  3 10  3   1  9  3 10  3   324
PCGAMG Opt l01         1 1.0 1.2919e-02 1.0 2.03e+06 1.4 3.6e+01 6.8e+03 1.1e+01  0  1  2  1  2   0  1  2  1  2   401
PCSetUp                2 1.0 1.2020e+00 1.0 8.25e+07 1.1 9.4e+02 1.2e+04 3.3e+02  7 39 40 59 69   7 39 40 59 72   201
PCSetUpOnBlocks       19 1.0 3.7277e-03 23.0 5.71e+06 0.0 0.0e+00 0.0e+00 0.0e+00  0  1  0  0  0   0  1  0  0  0  1531
PCApply               19 1.0 1.1763e+00 1.1 1.12e+08 1.0 1.2e+03 4.6e+03 1.9e+01  7 53 52 29  4   7 53 52 29  4   280
------------------------------------------------------------------------------------------------------------------------

Object Type          Creations   Destructions. Reports information only for process 0.

--- Event Stage 0: Main Stage

           Container    11             11
              Matrix    86             86
      Matrix Coarsen     2              2
   Matrix Null Space     1              1
           Index Set    66             66
   IS L to G Mapping     5              5
              Vector   183            183
   Star Forest Graph    35             35
       Krylov Solver     7              7
      Preconditioner     7              7
              Viewer     2              2
         PetscRandom     2              2
    Distributed Mesh     4              4
     Discrete System     4              4
           Weak Form     4              4
========================================================================================================================
Average time to get PetscTime(): 3.6e-08
Average time for MPI_Barrier(): 1.552e-06
Average time for zero size MPI_Send(): 1e-06
#PETSc Option Table entries:
--ndofs 30000 # (source: command line)
--problem_type elasticity # (source: command line)
--scaling_type strong # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-matptap_via scalable # (source: command line)
-mg_levels_esteig_ksp_type cg # (source: command line)
-mg_levels_ksp_type chebyshev # (source: command line)
-mg_levels_pc_type jacobi # (source: command line)
-options_left # (source: command line)
-pc_gamg_coarse_eq_limit 1000 # (source: command line)
-pc_type gamg # (source: command line)
#End of PETSc Option Table entries
Compiled without FORTRAN kernels
Compiled with full precision matrices (default)
sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4
Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w
-----------------------------------------
Libraries compiled on 2024-10-20 10:17:39 on reproducible 
Machine characteristics: Linux-6.1.0-27-arm64-aarch64-with-glibc2.40
Using PETSc directory: /usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real
Using PETSc arch: 
-----------------------------------------

Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 
Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0    -Wdate-time -D_FORTIFY_SOURCE=2
-----------------------------------------

Using include paths: -I/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi
-----------------------------------------

Using C linker: mpicc
Using Fortran linker: mpif90
Using libraries: -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/gcc/aarch64-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++
-----------------------------------------

#PETSc Option Table entries:
--ndofs 30000 # (source: command line)
--problem_type elasticity # (source: command line)
--scaling_type strong # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-matptap_via scalable # (source: command line)
-mg_levels_esteig_ksp_type cg # (source: command line)
-mg_levels_ksp_type chebyshev # (source: command line)
-mg_levels_pc_type jacobi # (source: command line)
-options_left # (source: command line)
-pc_gamg_coarse_eq_limit 1000 # (source: command line)
-pc_type gamg # (source: command line)
#End of PETSc Option Table entries
WARNING! There are options you set that were not used!
WARNING! could be spelling mistake, etc!
There are 4 unused database options. They are:
Option left: name:--ndofs value: 30000 source: command line
Option left: name:--problem_type value: elasticity source: command line
Option left: name:--scaling_type value: strong source: command line
Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line
==== poisson weak scaling (3 processes with ndofs=10000) ====
[2024-11-19 02:37:24.466] [RANK: 0] [info] Using partitioner with 216000 cell data
[2024-11-19 02:37:24.467] [RANK: 0] [info] Compute partition of cells across ranks
[2024-11-19 02:37:24.467] [RANK: 0] [info] Building mesh dual graph
[2024-11-19 02:37:24.467] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:24.545] [RANK: 0] [info] Build nonlocal part of mesh dual graph
[2024-11-19 02:37:24.545] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:24.546] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:24.546] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666
[2024-11-19 02:37:24.547] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800)
[2024-11-19 02:37:24.553] [RANK: 0] [info] Compute graph partition using PT-SCOTCH
[2024-11-19 02:37:42.391] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:42.412] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:42.474] [RANK: 0] [info] Extract basic topology: 213268->213268
[2024-11-19 02:37:42.474] [RANK: 0] [info] Build local dual graph
[2024-11-19 02:37:42.480] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:42.597] [RANK: 0] [info] GPS pseudo-diameter:(169) 50547-237
[2024-11-19 02:37:42.612] [RANK: 0] [info] Create topology (single cell type)
[2024-11-19 02:37:42.620] [RANK: 0] [info] Create topology (generalised)
[2024-11-19 02:37:42.632] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:37:42.656] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:37:42.802] [RANK: 0] [info] Compute ghost indices
[2024-11-19 02:37:42.802] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0
[2024-11-19 02:37:42.824] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0
[2024-11-19 02:37:42.899] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:42.908] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:43.116] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:43.136] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:43.172] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:43.196] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:43.257] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:37:43.280] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:37:43.280] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0
[2024-11-19 02:37:43.317] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:43.340] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:43.340] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666
[2024-11-19 02:37:43.449] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:43.449] [RANK: 0] [info] Cell type: 0 dofmap: 53317x4
[2024-11-19 02:37:43.462] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:43.462] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:43.462] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:43.596] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:43.620] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
UnitCube (30x30x30) to be refined 0 times
[2024-11-19 02:37:43.705] [RANK: 0] [info] Computing mesh entities of dimension 2
[2024-11-19 02:37:43.814] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:43.848] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:44.045] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:44.060] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:44.094] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:37:44.095] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose.
[2024-11-19 02:37:44.096] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:37:44.096] [RANK: 0] [info] Cell type: 0 dofmap: 53317x4
[2024-11-19 02:37:44.105] [RANK: 0] [info] Global index computation
[2024-11-19 02:37:44.112] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:37:44.113] [RANK: 0] [info] Get global indices
[2024-11-19 02:37:44.172] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:44.188] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:44.276] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:44.277] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:37:44.277] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0)
[2024-11-19 02:37:44.450] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:37:44.450] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0)
[2024-11-19 02:37:44.531] [RANK: 0] [info] Column ghost size increased from 458 to 1264
----------------------------------------------------------------
Test problem summary
  dolfinx version: 0.9.0
  dolfinx hash:    debian_1:0.9.0-3
  ufl hash:        475c28073ccb3c02130118a9af65e8309bf276c3
  petsc version:   Petsc Release Version 3.21.6, Sep 28, 2024 
  Problem type:    poisson
  Scaling type:    weak
  Num processes:   3
  Num cells:       162000 (162 thousand)
  Total degrees of freedom:               29791 (29.8 thousand)
  Average degrees of freedom per process: 9930
----------------------------------------------------------------
[2024-11-19 02:37:45.048] [RANK: 0] [info] PETSc Krylov solver starting to solve system.
KSP Object: 3 MPI processes
  type: cg
  maximum iterations=10000, initial guess is zero
  tolerances: relative=1e-08, absolute=1e-50, divergence=10000.
  left preconditioning
  using PRECONDITIONED norm type for convergence test
PC Object: 3 MPI processes
  type: hypre
    HYPRE BoomerAMG preconditioning
      Cycle type V
      Maximum number of levels 25
      Maximum number of iterations PER hypre call 1
      Convergence tolerance PER hypre call 0.
      Threshold for strong coupling 0.5
      Interpolation truncation factor 0.
      Interpolation: max elements per row 0
      Number of levels of aggressive coarsening 0
      Number of paths for aggressive coarsening 1
      Maximum row sums 0.9
      Sweeps down         1
      Sweeps up           1
      Sweeps on coarse    1
      Relax down          symmetric-SOR/Jacobi
      Relax up            symmetric-SOR/Jacobi
      Relax on coarse     Gaussian-elimination
      Relax weight  (all)      1.
      Outer relax weight (all) 1.
      Maximum size of coarsest grid 9
      Minimum size of coarsest grid 1
      Using CF-relaxation
      Not using more complex smoothers.
      Measure type        local
      Coarsen type        Falgout
      Interpolation type  classical
      SpGEMM type         hypre
  linear system matrix = precond matrix:
  Mat Object: 3 MPI processes
    type: mpiaij
    rows=29791, cols=29791
    total: nonzeros=424171, allocated nonzeros=424171
    total number of mallocs used during MatSetValues calls=0
      not using I-node (on process 0) routines

[MPI_MAX] Summary of timings                                                |  reps   wall avg   wall tot
---------------------------------------------------------------------------------------------------------
Build BoxMesh (tetrahedra)                                                  |     1  19.250000  19.250000
Build dofmap data                                                           |     2   0.170000   0.340000
Build sparsity                                                              |     1   0.030000   0.030000
Compute connectivity 2-0                                                    |     1   0.000000   0.000000
Compute dof reordering map                                                  |     2   0.005000   0.010000
Compute entities of dim = 2                                                 |     1   0.390000   0.390000
Compute graph partition (SCOTCH)                                            |     1  17.850000  17.850000
Compute local part of mesh dual graph (mixed)                               |     2   0.095000   0.190000
Compute local-to-local map                                                  |     1   0.000000   0.000000
Compute non-local part of mesh dual graph                                   |     1   0.010000   0.010000
Compute-local-to-global links for global/local adjacency list               |     1   0.000000   0.000000
Distribute fixed-degree adjacency list to destination ranks                 |     1   0.090000   0.090000
Distribute row-wise data (scalable)                                         |     1   0.200000   0.200000
GPS: create_level_structure                                                 |     6   0.006667   0.020000
Gibbs-Poole-Stockmeyer ordering                                             |     1   0.040000   0.040000
Init MPI                                                                    |     1   0.430000   0.430000
Init PETSc                                                                  |     1   0.010000   0.010000
Init dofmap from element dofmap                                             |     2   0.015000   0.030000
Init logging                                                                |     1   0.000000   0.000000
PETSc Krylov solver                                                         |     1   1.690000   1.690000
SCOTCH: call SCOTCH_dgraphBuild                                             |     1   0.010000   0.010000
SCOTCH: call SCOTCH_dgraphPart                                              |     1  17.840000  17.840000
SparsityPattern::finalize                                                   |     1   0.060000   0.060000
Topology: create                                                            |     1   0.650000   0.650000
Topology: determine shared index ownership                                  |     1   0.170000   0.170000
Topology: determine vertex ownership groups (owned, undetermined, unowned)  |     1   0.010000   0.010000
ZZZ Assemble                                                                |     1   0.580000   0.580000
ZZZ Assemble matrix                                                         |     1   0.120000   0.120000
ZZZ Assemble vector                                                         |     1   0.030000   0.030000
ZZZ Create Mesh                                                             |     1  19.250000  19.250000
ZZZ Create RHS function                                                     |     1   0.150000   0.150000
ZZZ Create boundary conditions                                              |     1   0.100000   0.100000
ZZZ Create facets and facet->cell connectivity                              |     1   0.390000   0.390000
ZZZ FunctionSpace                                                           |     1   0.120000   0.120000
ZZZ Solve                                                                   |     1   1.890000   1.890000
*** Number of Krylov iterations: 7
*** Solution norm:  36.6791
****************************************************************************************************************************************************************
***                                WIDEN YOUR WINDOW TO 160 CHARACTERS.  Use 'enscript -r -fCourier9' to print this document                                 ***
****************************************************************************************************************************************************************

------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------

/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-aarch64-linux-gnu/dolfinx-scaling-test on a  named i-capture-the-hostname with 3 processes, by pbuilder2 on Tue Nov 19 02:37:46 2024
Using Petsc Release Version 3.21.6, Sep 28, 2024 

                         Max       Max/Min     Avg       Total
Time (sec):           2.229e+01     1.000   2.229e+01
Objects:              0.000e+00     0.000   0.000e+00
Flops:                3.555e+06     1.029   3.489e+06  1.047e+07
Flops/sec:            1.595e+05     1.029   1.565e+05  4.696e+05
MPI Msg Count:        3.000e+01     1.000   3.000e+01  9.000e+01
MPI Msg Len (bytes):  1.970e+05     1.260   5.897e+03  5.307e+05
MPI Reductions:       7.200e+01     1.000

Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract)
                            e.g., VecAXPY() for real vectors of length N --> 2N flops
                            and VecAXPY() for complex vectors of length N --> 8N flops

Summary of Stages:   ----- Time ------  ----- Flop ------  --- Messages ---  -- Message Lengths --  -- Reductions --
                        Avg     %Total     Avg     %Total    Count   %Total     Avg         %Total    Count   %Total
 0:      Main Stage: 2.2287e+01 100.0%  1.0466e+07 100.0%  9.000e+01 100.0%  5.897e+03      100.0%  5.400e+01  75.0%

------------------------------------------------------------------------------------------------------------------------
See the 'Profiling' chapter of the users' manual for details on interpreting output.
Phase summary info:
   Count: number of times phase was executed
   Time and Flop: Max - maximum over all processors
                  Ratio - ratio of maximum to minimum over all processors
   Mess: number of messages sent
   AvgLen: average message length (bytes)
   Reduct: number of global reductions
   Global: entire computation
   Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop().
      %T - percent time in this phase         %F - percent flop in this phase
      %M - percent messages in this phase     %L - percent message lengths in this phase
      %R - percent reductions in this phase
   Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors)
------------------------------------------------------------------------------------------------------------------------
Event                Count      Time (sec)     Flop                              --- Global ---  --- Stage ----  Total
                   Max Ratio  Max     Ratio   Max  Ratio  Mess   AvgLen  Reduct  %T %F %M %L %R  %T %F %M %L %R Mflop/s
------------------------------------------------------------------------------------------------------------------------

--- Event Stage 0: Main Stage

BuildTwoSided          5 1.0 5.8412e-02 1.2 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00  0  0 27  0  7   0  0 27  0  9     0
BuildTwoSidedF         2 1.0 1.5289e-02 3.7 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00  0  0 13 50  3   0  0 13 50  4     0
MatMult                7 1.0 5.7718e-03 1.0 1.95e+06 1.0 4.2e+01 5.6e+03 0.0e+00  0 55 47 45  0   0 55 47 45  0   993
MatConvert             1 1.0 1.5248e-01 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00  1  0  0  0  3   1  0  0  0  4     0
MatAssemblyBegin       5 1.0 2.0821e-02 3.6 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00  0  0 13 50  3   0  0 13 50  4     0
MatAssemblyEnd         5 1.0 1.4325e-01 1.1 4.00e+03 1.3 1.2e+01 1.4e+03 5.0e+00  1  0 13  3  7   1  0 13  3  9     0
MatGetRowIJ            4 1.0 2.6400e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatView                1 1.0 5.0093e-03 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00  0  0  0  0  1   0  0  0  0  2     0
MatSetPreallCOO        2 1.0 1.0086e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatSetValuesCOO        2 1.0 6.4272e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecTDot               16 1.0 2.4324e-04 1.3 3.23e+05 1.0 0.0e+00 0.0e+00 1.6e+01  0  9  0  0 22   0  9  0  0 30  3919
VecNorm                8 1.0 3.3396e-04 1.7 1.62e+05 1.0 0.0e+00 0.0e+00 8.0e+00  0  5  0  0 11   0  5  0  0 15  1427
VecCopy                2 1.0 1.7720e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecSet                 9 1.0 3.5440e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecAXPY               14 1.0 1.2036e-04 1.1 2.83e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  8  0  0  0   0  8  0  0  0  6930
VecAYPX                6 1.0 7.2760e-05 1.0 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  3  0  0  0   0  3  0  0  0  4913
VecScatterBegin        7 1.0 1.3356e-04 1.1 0.00e+00 0.0 4.2e+01 5.6e+03 0.0e+00  0  0 47 45  0   0  0 47 45  0     0
VecScatterEnd          7 1.0 4.2911e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetGraph             3 1.0 3.8721e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetUp                3 1.0 7.5845e-02 1.3 0.00e+00 0.0 3.6e+01 8.2e+02 3.0e+00  0  0 40  6  4   0  0 40  6  6     0
SFPack                 7 1.0 2.7600e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFUnpack               7 1.0 2.6800e-06 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSetUp               1 1.0 5.2601e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSolve               1 1.0 2.7632e-01 1.0 2.84e+06 1.0 4.2e+01 5.6e+03 2.4e+01  1 80 47 45 33   1 80 47 45 44    30
PCSetUp                1 1.0 1.4144e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00  6  0  0  0  3   6  0  0  0  4     0
PCApply                8 1.0 2.6980e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  1  0  0  0  0   1  0  0  0  0     0
------------------------------------------------------------------------------------------------------------------------

Object Type          Creations   Destructions. Reports information only for process 0.

--- Event Stage 0: Main Stage

           Container     2              2
              Matrix     7              7
           Index Set     6              6
   IS L to G Mapping     1              1
              Vector    12             12
   Star Forest Graph     3              3
       Krylov Solver     1              1
      Preconditioner     1              1
              Viewer     1              1
========================================================================================================================
Average time to get PetscTime(): 3.2e-08
Average time for MPI_Barrier(): 1.448e-06
Average time for zero size MPI_Send(): 3.24e-06
#PETSc Option Table entries:
--ndofs 10000 # (source: command line)
--problem_type poisson # (source: command line)
--scaling_type weak # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-options_left # (source: command line)
-pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line)
-pc_hypre_type boomeramg # (source: command line)
-pc_type hypre # (source: command line)
#End of PETSc Option Table entries
Compiled without FORTRAN kernels
Compiled with full precision matrices (default)
sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4
Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w
-----------------------------------------
Libraries compiled on 2024-10-20 10:17:39 on reproducible 
Machine characteristics: Linux-6.1.0-27-arm64-aarch64-with-glibc2.40
Using PETSc directory: /usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real
Using PETSc arch: 
-----------------------------------------

Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 
Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0    -Wdate-time -D_FORTIFY_SOURCE=2
-----------------------------------------

Using include paths: -I/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi
-----------------------------------------

Using C linker: mpicc
Using Fortran linker: mpif90
Using libraries: -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/gcc/aarch64-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++
-----------------------------------------

#PETSc Option Table entries:
--ndofs 10000 # (source: command line)
--problem_type poisson # (source: command line)
--scaling_type weak # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-options_left # (source: command line)
-pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line)
-pc_hypre_type boomeramg # (source: command line)
-pc_type hypre # (source: command line)
#End of PETSc Option Table entries
WARNING! There are options you set that were not used!
WARNING! could be spelling mistake, etc!
There are 3 unused database options. They are:
Option left: name:--ndofs value: 10000 source: command line
Option left: name:--problem_type value: poisson source: command line
Option left: name:--scaling_type value: weak source: command line
==== poisson strong scaling (3 processes with ndofs=30000) ====
[2024-11-19 02:37:47.519] [RANK: 0] [info] Using partitioner with 216000 cell data
[2024-11-19 02:37:47.520] [RANK: 0] [info] Compute partition of cells across ranks
[2024-11-19 02:37:47.520] [RANK: 0] [info] Building mesh dual graph
[2024-11-19 02:37:47.520] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:37:47.593] [RANK: 0] [info] Build nonlocal part of mesh dual graph
[2024-11-19 02:37:47.638] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:37:47.652] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:37:47.653] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666
[2024-11-19 02:37:47.662] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800)
[2024-11-19 02:37:47.662] [RANK: 0] [info] Compute graph partition using PT-SCOTCH
[2024-11-19 02:38:05.455] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:38:05.488] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:38:05.551] [RANK: 0] [info] Extract basic topology: 212768->212768
[2024-11-19 02:38:05.551] [RANK: 0] [info] Build local dual graph
[2024-11-19 02:38:05.551] [RANK: 0] [info] Build local part of mesh dual graph (mixed)
[2024-11-19 02:38:05.635] [RANK: 0] [info] GPS pseudo-diameter:(164) 52578-2473
[2024-11-19 02:38:05.651] [RANK: 0] [info] Create topology (single cell type)
[2024-11-19 02:38:05.656] [RANK: 0] [info] Create topology (generalised)
[2024-11-19 02:38:05.668] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3
[2024-11-19 02:38:05.684] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3
[2024-11-19 02:38:05.766] [RANK: 0] [info] Compute ghost indices
[2024-11-19 02:38:05.766] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0
[2024-11-19 02:38:05.772] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0
[2024-11-19 02:38:05.827] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:38:05.848] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:38:05.999] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.012] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.028] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.044] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.077] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0
[2024-11-19 02:38:06.092] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0
[2024-11-19 02:38:06.092] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0
[2024-11-19 02:38:06.109] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.124] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.124] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666
[2024-11-19 02:38:06.181] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:38:06.181] [RANK: 0] [info] Cell type: 0 dofmap: 53192x4
[2024-11-19 02:38:06.190] [RANK: 0] [info] Global index computation
[2024-11-19 02:38:06.190] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:38:06.190] [RANK: 0] [info] Get global indices
[2024-11-19 02:38:06.260] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.276] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
UnitCube (30x30x30) to be refined 0 times
[2024-11-19 02:38:06.325] [RANK: 0] [info] Computing mesh entities of dimension 2
[2024-11-19 02:38:06.399] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.420] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.575] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.596] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.622] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:38:06.622] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose.
[2024-11-19 02:38:06.623] [RANK: 0] [info] Checking required entities per dimension
[2024-11-19 02:38:06.623] [RANK: 0] [info] Cell type: 0 dofmap: 53192x4
[2024-11-19 02:38:06.637] [RANK: 0] [info] Global index computation
[2024-11-19 02:38:06.637] [RANK: 0] [info] Got 1 index_maps
[2024-11-19 02:38:06.637] [RANK: 0] [info] Get global indices
[2024-11-19 02:38:06.708] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2
[2024-11-19 02:38:06.724] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2
[2024-11-19 02:38:06.812] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:38:06.813] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0)
[2024-11-19 02:38:06.813] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0)
[2024-11-19 02:38:06.990] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0)
[2024-11-19 02:38:06.990] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0)
[2024-11-19 02:38:07.032] [RANK: 0] [info] Column ghost size increased from 441 to 1227
----------------------------------------------------------------
Test problem summary
  dolfinx version: 0.9.0
  dolfinx hash:    debian_1:0.9.0-3
  ufl hash:        475c28073ccb3c02130118a9af65e8309bf276c3
  petsc version:   Petsc Release Version 3.21.6, Sep 28, 2024 
  Problem type:    poisson
  Scaling type:    strong
  Num processes:   3
  Num cells:       162000 (162 thousand)
  Total degrees of freedom:               29791 (29.8 thousand)
  Average degrees of freedom per process: 9930
----------------------------------------------------------------
[2024-11-19 02:38:07.128] [RANK: 0] [info] PETSc Krylov solver starting to solve system.
KSP Object: 3 MPI processes
  type: cg
  maximum iterations=10000, initial guess is zero
  tolerances: relative=1e-08, absolute=1e-50, divergence=10000.
  left preconditioning
  using PRECONDITIONED norm type for convergence test
PC Object: 3 MPI processes
  type: hypre
    HYPRE BoomerAMG preconditioning
      Cycle type V
      Maximum number of levels 25
      Maximum number of iterations PER hypre call 1
      Convergence tolerance PER hypre call 0.
      Threshold for strong coupling 0.5
      Interpolation truncation factor 0.
      Interpolation: max elements per row 0
      Number of levels of aggressive coarsening 0
      Number of paths for aggressive coarsening 1
      Maximum row sums 0.9
      Sweeps down         1
      Sweeps up           1
      Sweeps on coarse    1
      Relax down          symmetric-SOR/Jacobi
      Relax up            symmetric-SOR/Jacobi
      Relax on coarse     Gaussian-elimination
      Relax weight  (all)      1.
      Outer relax weight (all) 1.
      Maximum size of coarsest grid 9
      Minimum size of coarsest grid 1
      Using CF-relaxation
      Not using more complex smoothers.
      Measure type        local
      Coarsen type        Falgout
      Interpolation type  classical
      SpGEMM type         hypre
  linear system matrix = precond matrix:
  Mat Object: 3 MPI processes
    type: mpiaij
    rows=29791, cols=29791
    total: nonzeros=424171, allocated nonzeros=424171
    total number of mallocs used during MatSetValues calls=0
      not using I-node (on process 0) routines

[MPI_MAX] Summary of timings                                                |  reps   wall avg   wall tot
---------------------------------------------------------------------------------------------------------
Build BoxMesh (tetrahedra)                                                  |     1  18.820000  18.820000
Build dofmap data                                                           |     2   0.125000   0.250000
Build sparsity                                                              |     1   0.040000   0.040000
Compute connectivity 2-0                                                    |     1   0.000000   0.000000
Compute dof reordering map                                                  |     2   0.005000   0.010000
Compute entities of dim = 2                                                 |     1   0.300000   0.300000
Compute graph partition (SCOTCH)                                            |     1  17.810000  17.810000
Compute local part of mesh dual graph (mixed)                               |     2   0.100000   0.200000
Compute local-to-local map                                                  |     1   0.000000   0.000000
Compute non-local part of mesh dual graph                                   |     1   0.070000   0.070000
Compute-local-to-global links for global/local adjacency list               |     1   0.000000   0.000000
Distribute fixed-degree adjacency list to destination ranks                 |     1   0.100000   0.100000
Distribute row-wise data (scalable)                                         |     1   0.110000   0.110000
GPS: create_level_structure                                                 |     2   0.001429   0.010000
Gibbs-Poole-Stockmeyer ordering                                             |     1   0.020000   0.020000
Init MPI                                                                    |     1   0.360000   0.360000
Init PETSc                                                                  |     1   0.000000   0.000000
Init dofmap from element dofmap                                             |     2   0.015000   0.030000
Init logging                                                                |     1   0.000000   0.000000
PETSc Krylov solver                                                         |     1   0.880000   0.880000
SCOTCH: call SCOTCH_dgraphBuild                                             |     1   0.000000   0.000000
SCOTCH: call SCOTCH_dgraphPart                                              |     1  17.810000  17.810000
SparsityPattern::finalize                                                   |     1   0.020000   0.020000
Topology: create                                                            |     1   0.420000   0.420000
Topology: determine shared index ownership                                  |     1   0.100000   0.100000
Topology: determine vertex ownership groups (owned, undetermined, unowned)  |     1   0.010000   0.010000
ZZZ Assemble                                                                |     1   0.370000   0.370000
ZZZ Assemble matrix                                                         |     1   0.070000   0.070000
ZZZ Assemble vector                                                         |     1   0.010000   0.010000
ZZZ Create Mesh                                                             |     1  18.820000  18.820000
ZZZ Create RHS function                                                     |     1   0.150000   0.150000
ZZZ Create boundary conditions                                              |     1   0.090000   0.090000
ZZZ Create facets and facet->cell connectivity                              |     1   0.300000   0.300000
ZZZ FunctionSpace                                                           |     1   0.130000   0.130000
ZZZ Solve                                                                   |     1   0.880000   0.880000
*** Number of Krylov iterations: 7
*** Solution norm:  36.6791
****************************************************************************************************************************************************************
***                                WIDEN YOUR WINDOW TO 160 CHARACTERS.  Use 'enscript -r -fCourier9' to print this document                                 ***
****************************************************************************************************************************************************************

------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------

/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-aarch64-linux-gnu/dolfinx-scaling-test on a  named i-capture-the-hostname with 3 processes, by pbuilder2 on Tue Nov 19 02:38:07 2024
Using Petsc Release Version 3.21.6, Sep 28, 2024 

                         Max       Max/Min     Avg       Total
Time (sec):           2.049e+01     1.000   2.049e+01
Objects:              0.000e+00     0.000   0.000e+00
Flops:                3.528e+06     1.023   3.489e+06  1.047e+07
Flops/sec:            1.722e+05     1.023   1.703e+05  5.110e+05
MPI Msg Count:        3.000e+01     1.000   3.000e+01  9.000e+01
MPI Msg Len (bytes):  1.813e+05     1.186   5.709e+03  5.138e+05
MPI Reductions:       7.200e+01     1.000

Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract)
                            e.g., VecAXPY() for real vectors of length N --> 2N flops
                            and VecAXPY() for complex vectors of length N --> 8N flops

Summary of Stages:   ----- Time ------  ----- Flop ------  --- Messages ---  -- Message Lengths --  -- Reductions --
                        Avg     %Total     Avg     %Total    Count   %Total     Avg         %Total    Count   %Total
 0:      Main Stage: 2.0485e+01 100.0%  1.0468e+07 100.0%  9.000e+01 100.0%  5.709e+03      100.0%  5.400e+01  75.0%

------------------------------------------------------------------------------------------------------------------------
See the 'Profiling' chapter of the users' manual for details on interpreting output.
Phase summary info:
   Count: number of times phase was executed
   Time and Flop: Max - maximum over all processors
                  Ratio - ratio of maximum to minimum over all processors
   Mess: number of messages sent
   AvgLen: average message length (bytes)
   Reduct: number of global reductions
   Global: entire computation
   Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop().
      %T - percent time in this phase         %F - percent flop in this phase
      %M - percent messages in this phase     %L - percent message lengths in this phase
      %R - percent reductions in this phase
   Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors)
------------------------------------------------------------------------------------------------------------------------
Event                Count      Time (sec)     Flop                              --- Global ---  --- Stage ----  Total
                   Max Ratio  Max     Ratio   Max  Ratio  Mess   AvgLen  Reduct  %T %F %M %L %R  %T %F %M %L %R Mflop/s
------------------------------------------------------------------------------------------------------------------------

--- Event Stage 0: Main Stage

BuildTwoSided          5 1.0 3.7804e-02 289.0 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00  0  0 27  0  7   0  0 27  0  9     0
BuildTwoSidedF         2 1.0 3.3723e-02 294.4 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00  0  0 13 50  3   0  0 13 50  4     0
MatMult                7 1.0 2.1782e-02 1.6 1.93e+06 1.0 4.2e+01 5.5e+03 0.0e+00  0 55 47 45  0   0 55 47 45  0   263
MatConvert             1 1.0 7.8918e-03 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00  0  0  0  0  3   0  0  0  0  4     0
MatAssemblyBegin       5 1.0 3.5061e-02 19.3 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00  0  0 13 50  3   0  0 13 50  4     0
MatAssemblyEnd         5 1.0 7.1759e-03 1.0 3.75e+03 1.2 1.2e+01 1.4e+03 5.0e+00  0  0 13  3  7   0  0 13  3  9     1
MatGetRowIJ            4 1.0 2.0800e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatView                1 1.0 3.0504e-04 4.2 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00  0  0  0  0  1   0  0  0  0  2     0
MatSetPreallCOO        2 1.0 1.4127e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
MatSetValuesCOO        2 1.0 7.1380e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecTDot               16 1.0 2.0042e-02 2.4 3.21e+05 1.0 0.0e+00 0.0e+00 1.6e+01  0  9  0  0 22   0  9  0  0 30    48
VecNorm                8 1.0 7.6920e-03 19.1 1.60e+05 1.0 0.0e+00 0.0e+00 8.0e+00  0  5  0  0 11   0  5  0  0 15    62
VecCopy                2 1.0 1.7480e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecSet                 9 1.0 2.3921e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
VecAXPY               14 1.0 1.4440e-04 1.1 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  8  0  0  0   0  8  0  0  0  5777
VecAYPX                6 1.0 9.2801e-05 1.2 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00  0  3  0  0  0   0  3  0  0  0  3852
VecScatterBegin        7 1.0 1.4012e-04 1.2 0.00e+00 0.0 4.2e+01 5.5e+03 0.0e+00  0  0 47 45  0   0  0 47 45  0     0
VecScatterEnd          7 1.0 2.0288e-02 80.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetGraph             3 1.0 3.6920e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFSetUp                3 1.0 4.1863e-03 33.9 0.00e+00 0.0 3.6e+01 8.0e+02 3.0e+00  0  0 40  6  4   0  0 40  6  6     0
SFPack                 7 1.0 2.3880e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
SFUnpack               7 1.0 2.9600e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSetUp               1 1.0 4.3080e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  0  0  0  0  0   0  0  0  0  0     0
KSPSolve               1 1.0 5.7371e-01 1.0 2.81e+06 1.0 4.2e+01 5.5e+03 2.4e+01  3 80 47 45 33   3 80 47 45 44    15
PCSetUp                1 1.0 2.9903e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00  1  0  0  0  3   1  0  0  0  4     0
PCApply                8 1.0 5.4695e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00  3  0  0  0  0   3  0  0  0  0     0
------------------------------------------------------------------------------------------------------------------------

Object Type          Creations   Destructions. Reports information only for process 0.

--- Event Stage 0: Main Stage

           Container     2              2
              Matrix     7              7
           Index Set     6              6
   IS L to G Mapping     1              1
              Vector    12             12
   Star Forest Graph     3              3
       Krylov Solver     1              1
      Preconditioner     1              1
              Viewer     1              1
========================================================================================================================
Average time to get PetscTime(): 3.6e-08
Average time for MPI_Barrier(): 0.00959528
Average time for zero size MPI_Send(): 0.00529264
#PETSc Option Table entries:
--ndofs 30000 # (source: command line)
--problem_type poisson # (source: command line)
--scaling_type strong # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-options_left # (source: command line)
-pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line)
-pc_hypre_type boomeramg # (source: command line)
-pc_type hypre # (source: command line)
#End of PETSc Option Table entries
Compiled without FORTRAN kernels
Compiled with full precision matrices (default)
sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4
Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w
-----------------------------------------
Libraries compiled on 2024-10-20 10:17:39 on reproducible 
Machine characteristics: Linux-6.1.0-27-arm64-aarch64-with-glibc2.40
Using PETSc directory: /usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real
Using PETSc arch: 
-----------------------------------------

Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 
Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -fPIC -ffree-line-length-0    -Wdate-time -D_FORTIFY_SOURCE=2
-----------------------------------------

Using include paths: -I/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi
-----------------------------------------

Using C linker: mpicc
Using Fortran linker: mpif90
Using libraries: -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.21/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/gcc/aarch64-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++
-----------------------------------------

#PETSc Option Table entries:
--ndofs 30000 # (source: command line)
--problem_type poisson # (source: command line)
--scaling_type strong # (source: command line)
-ksp_rtol 1.0e-8 # (source: command line)
-ksp_type cg # (source: command line)
-ksp_view # (source: command line)
-log_view # (source: command line)
-options_left # (source: command line)
-pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line)
-pc_hypre_type boomeramg # (source: command line)
-pc_type hypre # (source: command line)
#End of PETSc Option Table entries
WARNING! There are options you set that were not used!
WARNING! could be spelling mistake, etc!
There are 3 unused database options. They are:
Option left: name:--ndofs value: 30000 source: command line
Option left: name:--problem_type value: poisson source: command line
Option left: name:--scaling_type value: strong source: command line
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