I: pbuilder: network access will be disabled during build
I: Current time: Tue Nov 12 00:27:13 -12 2024
I: pbuilder-time-stamp: 1731414433
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [python-skbio_0.6.2-3.dsc]
I: copying [./python-skbio_0.6.2.orig.tar.gz]
I: copying [./python-skbio_0.6.2-3.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sat Sep 28 10:29:34 2024 
gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.6.2-3.dsc: no acceptable signature found
dpkg-source: info: extracting python-skbio in python-skbio-0.6.2
dpkg-source: info: unpacking python-skbio_0.6.2.orig.tar.gz
dpkg-source: info: unpacking python-skbio_0.6.2-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying use_packaged_simde
dpkg-source: info: applying mathjax-path
dpkg-source: info: applying 0002-use-libsww-as-library-not-embedded-src.patch
dpkg-source: info: applying no_privacy_breach_logo.patch
dpkg-source: info: applying local_inventory
dpkg-source: info: applying docs-no-version-switch
dpkg-source: info: applying 0007-Fix-cython-segmentation-error-2090.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2066760/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='amd64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
  DISTRIBUTION='unstable'
  HOME='/root'
  HOST_ARCH='amd64'
  IFS=' 	
  '
  INVOCATION_ID='638e4299c3f942208f4e7a8e0482ee7b'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='2066760'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iP5mXe2Z/pbuilderrc_xaxh --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iP5mXe2Z/b1 --logfile b1/build.log python-skbio_0.6.2-3.dsc'
  SUDO_GID='110'
  SUDO_UID='105'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://46.16.76.132:3128'
I: uname -a
  Linux ionos1-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Aug  4 21:30 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/2066760/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), cython3 (>= 3), dh-sequence-python3, python3-all-dev, python3-biom-format, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians, python3-sklearn, python3-natsort, python3-statsmodels, libssw-dev, sphinx-common, libsimde-dev, python3-sphinx, python3-sphinx-design, python3-sphinx-copybutton, python3-pydata-sphinx-theme, python3-doc, python3-numpydoc, python-scipy-doc, python-biom-format-doc, python-pandas-doc, python-numpy-doc, python3-pytest, architecture-is-64-bit
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19969 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on cython3 (>= 3); however:
  Package cython3 is not installed.
 pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
  Package dh-sequence-python3 is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
  Package python3-all-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-biom-format; however:
  Package python3-biom-format is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
  Package python3-matplotlib is not installed.
 pbuilder-satisfydepends-dummy depends on python3-cachecontrol; however:
  Package python3-cachecontrol is not installed.
 pbuilder-satisfydepends-dummy depends on python3-decorator; however:
  Package python3-decorator is not installed.
 pbuilder-satisfydepends-dummy depends on python3-h5py; however:
  Package python3-h5py is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pandas; however:
  Package python3-pandas is not installed.
 pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.9); however:
  Package python3-scipy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-ipython; however:
  Package python3-ipython is not installed.
 pbuilder-satisfydepends-dummy depends on python3-hdmedians; however:
  Package python3-hdmedians is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sklearn; however:
  Package python3-sklearn is not installed.
 pbuilder-satisfydepends-dummy depends on python3-natsort; however:
  Package python3-natsort is not installed.
 pbuilder-satisfydepends-dummy depends on python3-statsmodels; however:
  Package python3-statsmodels is not installed.
 pbuilder-satisfydepends-dummy depends on libssw-dev; however:
  Package libssw-dev is not installed.
 pbuilder-satisfydepends-dummy depends on sphinx-common; however:
  Package sphinx-common is not installed.
 pbuilder-satisfydepends-dummy depends on libsimde-dev; however:
  Package libsimde-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sphinx; however:
  Package python3-sphinx is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however:
  Package python3-sphinx-design is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sphinx-copybutton; however:
  Package python3-sphinx-copybutton is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pydata-sphinx-theme; however:
  Package python3-pydata-sphinx-theme is not installed.
 pbuilder-satisfydepends-dummy depends on python3-doc; however:
  Package python3-doc is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpydoc; however:
  Package python3-numpydoc is not installed.
 pbuilder-satisfydepends-dummy depends on python-scipy-doc; however:
  Package python-scipy-doc is not installed.
 pbuilder-satisfydepends-dummy depends on python-biom-format-doc; however:
  Package python-biom-format-doc is not installed.
 pbuilder-satisfydepends-dummy depends on python-pandas-doc; however:
  Package python-pandas-doc is not installed.
 pbuilder-satisfydepends-dummy depends on python-numpy-doc; however:
  Package python-numpy-doc is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pytest; however:
  Package python3-pytest is not installed.
 pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however:
  Package architecture-is-64-bit is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  architecture-properties{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-mathjax{a} fonts-open-sans{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsimde-dev{a} libssh2-1t64{a} libssw-dev{a} libssw0{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-numpy-doc{a} python-pandas-doc{a} python-scipy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-brotli{a} python3-bs4{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-patsy{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-accessible-pygments python3-bottleneck python3-cssselect python3-cvxopt python3-html5lib python3-numba python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 
0 packages upgraded, 247 newly installed, 0 to remove and 0 not upgraded.
Need to get 184 MB of archives. After unpacking 1076 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB]
Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B]
Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 34 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 architecture-properties amd64 0.2.3 [2184 B]
Get: 39 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB]
Get: 40 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 49 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B]
Get: 65 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.11+dfsg-1 [2449 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB]
Get: 68 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 71 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 72 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2 [699 kB]
Get: 76 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 85 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 86 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 87 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get: 88 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 89 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 90 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB]
Get: 91 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB]
Get: 92 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB]
Get: 93 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB]
Get: 94 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB]
Get: 95 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 96 http://deb.debian.org/debian unstable/main amd64 fonts-open-sans all 1.11-2 [574 kB]
Get: 97 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB]
Get: 98 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB]
Get: 99 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB]
Get: 100 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB]
Get: 101 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB]
Get: 102 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 103 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 104 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 105 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 106 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB]
Get: 107 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB]
Get: 108 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get: 109 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB]
Get: 110 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB]
Get: 111 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB]
Get: 112 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 113 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB]
Get: 114 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B]
Get: 115 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB]
Get: 116 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB]
Get: 117 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get: 118 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 119 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB]
Get: 120 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 121 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 122 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 123 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 124 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
Get: 125 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB]
Get: 126 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB]
Get: 127 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get: 128 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 129 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 130 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB]
Get: 131 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB]
Get: 132 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB]
Get: 133 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 134 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB]
Get: 135 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B]
Get: 136 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B]
Get: 137 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get: 138 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB]
Get: 139 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB]
Get: 140 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB]
Get: 141 http://deb.debian.org/debian unstable/main amd64 libssw0 amd64 1.1-15+b1 [21.8 kB]
Get: 142 http://deb.debian.org/debian unstable/main amd64 libssw-dev amd64 1.1-15+b1 [24.6 kB]
Get: 143 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB]
Get: 144 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 145 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB]
Get: 146 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB]
Get: 147 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB]
Get: 148 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB]
Get: 149 http://deb.debian.org/debian unstable/main amd64 python-biom-format-doc all 2.1.16-1 [67.3 kB]
Get: 150 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB]
Get: 151 http://deb.debian.org/debian unstable/main amd64 python-numpy-doc all 1:1.26.4+ds-11 [9384 kB]
Get: 152 http://deb.debian.org/debian unstable/main amd64 python-pandas-doc all 2.2.3+dfsg-5 [9245 kB]
Get: 153 http://deb.debian.org/debian unstable/main amd64 python-scipy-doc all 1.13.1-5 [30.3 kB]
Get: 154 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB]
Get: 155 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B]
Get: 156 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB]
Get: 157 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB]
Get: 158 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B]
Get: 159 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB]
Get: 160 http://deb.debian.org/debian unstable/main amd64 python3-asttokens all 2.4.1-2 [20.5 kB]
Get: 161 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB]
Get: 162 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB]
Get: 163 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB]
Get: 164 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB]
Get: 165 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-8 [1020 kB]
Get: 166 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-8 [14.9 kB]
Get: 167 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB]
Get: 168 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-2 [94.3 kB]
Get: 169 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 170 http://deb.debian.org/debian unstable/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-5 [4389 kB]
Get: 171 http://deb.debian.org/debian unstable/main amd64 python3-pandas all 2.2.3+dfsg-5 [3096 kB]
Get: 172 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 173 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB]
Get: 174 http://deb.debian.org/debian unstable/main amd64 python3-biom-format amd64 2.1.16-1+b1 [145 kB]
Get: 175 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB]
Get: 176 http://deb.debian.org/debian unstable/main amd64 python3-soupsieve all 2.6-1 [38.3 kB]
Get: 177 http://deb.debian.org/debian unstable/main amd64 python3-bs4 all 4.12.3-3 [133 kB]
Get: 178 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B]
Get: 179 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB]
Get: 180 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB]
Get: 181 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB]
Get: 182 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get: 183 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB]
Get: 184 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b2 [80.4 kB]
Get: 185 http://deb.debian.org/debian unstable/main amd64 python3-cachecontrol all 0.14.1-1 [18.6 kB]
Get: 186 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB]
Get: 187 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get: 188 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB]
Get: 189 http://deb.debian.org/debian unstable/main amd64 python3.12-doc all 3.12.7-3 [13.4 MB]
Get: 190 http://deb.debian.org/debian unstable/main amd64 python3-doc all 3.12.6-1 [9884 B]
Get: 191 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB]
Get: 192 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB]
Get: 193 http://deb.debian.org/debian unstable/main amd64 python3-executing all 2.1.0-0.1 [23.9 kB]
Get: 194 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB]
Get: 195 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB]
Get: 196 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB]
Get: 197 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB]
Get: 198 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get: 199 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB]
Get: 200 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB]
Get: 201 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get: 202 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB]
Get: 203 http://deb.debian.org/debian unstable/main amd64 python3-hdmedians amd64 0.14.2-5.1+b1 [118 kB]
Get: 204 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B]
Get: 205 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B]
Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-parso all 0.8.3-1 [67.4 kB]
Get: 207 http://deb.debian.org/debian unstable/main amd64 python3-typeshed all 0.0~git20231111.6764465-3 [1258 kB]
Get: 208 http://deb.debian.org/debian unstable/main amd64 python3-jedi all 0.19.1+ds1-1 [691 kB]
Get: 209 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB]
Get: 210 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B]
Get: 211 http://deb.debian.org/debian unstable/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB]
Get: 212 http://deb.debian.org/debian unstable/main amd64 python3-prompt-toolkit all 3.0.48-1 [277 kB]
Get: 213 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB]
Get: 214 http://deb.debian.org/debian unstable/main amd64 python3-pure-eval all 0.2.3-1 [11.2 kB]
Get: 215 http://deb.debian.org/debian unstable/main amd64 python3-stack-data all 0.6.3-1 [21.6 kB]
Get: 216 http://deb.debian.org/debian unstable/main amd64 python3-ptyprocess all 0.7.0-6 [14.5 kB]
Get: 217 http://deb.debian.org/debian unstable/main amd64 python3-pexpect all 4.9-3 [55.6 kB]
Get: 218 http://deb.debian.org/debian unstable/main amd64 python3-ipython all 8.29.0-1 [567 kB]
Get: 219 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB]
Get: 220 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB]
Get: 221 http://deb.debian.org/debian unstable/main amd64 python3-joblib all 1.3.2-5 [216 kB]
Get: 222 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB]
Get: 223 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1 [502 kB]
Get: 224 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB]
Get: 225 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB]
Get: 226 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.6-1 [9428 B]
Get: 227 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB]
Get: 228 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get: 229 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB]
Get: 230 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB]
Get: 231 http://deb.debian.org/debian unstable/main amd64 python3-natsort all 8.0.2-2 [39.0 kB]
Get: 232 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB]
Get: 233 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get: 234 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB]
Get: 235 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB]
Get: 236 http://deb.debian.org/debian unstable/main amd64 python3-numpydoc all 1.6.0-2 [49.6 kB]
Get: 237 http://deb.debian.org/debian unstable/main amd64 python3-patsy all 0.5.6-1 [173 kB]
Get: 238 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get: 239 http://deb.debian.org/debian unstable/main amd64 python3-pydata-sphinx-theme all 0.15.4+dfsg-2 [40.3 kB]
Get: 240 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB]
Get: 241 http://deb.debian.org/debian unstable/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB]
Get: 242 http://deb.debian.org/debian unstable/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-6 [3657 kB]
Get: 243 http://deb.debian.org/debian unstable/main amd64 python3-sklearn all 1.4.2+dfsg-6 [2248 kB]
Get: 244 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-copybutton all 0.5.2-2 [17.9 kB]
Get: 245 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-design all 0.6.1-1 [883 kB]
Get: 246 http://deb.debian.org/debian unstable/main amd64 python3-statsmodels-lib amd64 0.14.4+dfsg-1 [1536 kB]
Get: 247 http://deb.debian.org/debian unstable/main amd64 python3-statsmodels all 0.14.4+dfsg-1 [4825 kB]
Fetched 184 MB in 16s (11.5 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpython3.12-minimal:amd64.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19969 files and directories currently installed.)
Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ...
Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ...
Selecting previously unselected package libexpat1:amd64.
Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ...
Unpacking libexpat1:amd64 (2.6.4-1) ...
Selecting previously unselected package python3.12-minimal.
Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ...
Unpacking python3.12-minimal (3.12.7-3) ...
Setting up libpython3.12-minimal:amd64 (3.12.7-3) ...
Setting up libexpat1:amd64 (2.6.4-1) ...
Setting up python3.12-minimal (3.12.7-3) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 20289 files and directories currently installed.)
Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ...
Unpacking python3-minimal (3.12.6-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../02-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Selecting previously unselected package tzdata.
Preparing to unpack .../03-tzdata_2024b-3_all.deb ...
Unpacking tzdata (2024b-3) ...
Selecting previously unselected package libkrb5support0:amd64.
Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ...
Unpacking libkrb5support0:amd64 (1.21.3-3) ...
Selecting previously unselected package libcom-err2:amd64.
Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ...
Unpacking libcom-err2:amd64 (1.47.1-1+b1) ...
Selecting previously unselected package libk5crypto3:amd64.
Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ...
Unpacking libk5crypto3:amd64 (1.21.3-3) ...
Selecting previously unselected package libkeyutils1:amd64.
Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ...
Unpacking libkeyutils1:amd64 (1.6.3-4) ...
Selecting previously unselected package libkrb5-3:amd64.
Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ...
Unpacking libkrb5-3:amd64 (1.21.3-3) ...
Selecting previously unselected package libgssapi-krb5-2:amd64.
Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ...
Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ...
Selecting previously unselected package libtirpc-common.
Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ...
Unpacking libtirpc-common (1.3.4+ds-1.3) ...
Selecting previously unselected package libtirpc3t64:amd64.
Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ...
Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
Selecting previously unselected package libnsl2:amd64.
Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ...
Unpacking libnsl2:amd64 (1.3.0-3+b3) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../13-readline-common_8.2-5_all.deb ...
Unpacking readline-common (8.2-5) ...
Selecting previously unselected package libreadline8t64:amd64.
Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ...
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-5) ...
Selecting previously unselected package libpython3.12-stdlib:amd64.
Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ...
Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ...
Selecting previously unselected package python3.12.
Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ...
Unpacking python3.12 (3.12.7-3) ...
Selecting previously unselected package libpython3-stdlib:amd64.
Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ...
Unpacking libpython3-stdlib:amd64 (3.12.6-1) ...
Setting up python3-minimal (3.12.6-1) ...
Selecting previously unselected package python3.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21351 files and directories currently installed.)
Preparing to unpack .../000-python3_3.12.6-1_amd64.deb ...
Unpacking python3 (3.12.6-1) ...
Selecting previously unselected package sgml-base.
Preparing to unpack .../001-sgml-base_1.31_all.deb ...
Unpacking sgml-base (1.31) ...
Selecting previously unselected package libproc2-0:amd64.
Preparing to unpack .../002-libproc2-0_2%3a4.0.4-6_amd64.deb ...
Unpacking libproc2-0:amd64 (2:4.0.4-6) ...
Selecting previously unselected package procps.
Preparing to unpack .../003-procps_2%3a4.0.4-6_amd64.deb ...
Unpacking procps (2:4.0.4-6) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ...
Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package openssl.
Preparing to unpack .../005-openssl_3.3.2-2_amd64.deb ...
Unpacking openssl (3.3.2-2) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../006-ca-certificates_20240203_all.deb ...
Unpacking ca-certificates (20240203) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../007-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ...
Unpacking libmagic-mgc (1:5.45-3+b1) ...
Selecting previously unselected package libmagic1t64:amd64.
Preparing to unpack .../008-libmagic1t64_1%3a5.45-3+b1_amd64.deb ...
Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ...
Selecting previously unselected package file.
Preparing to unpack .../009-file_1%3a5.45-3+b1_amd64.deb ...
Unpacking file (1:5.45-3+b1) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../010-gettext-base_0.22.5-2_amd64.deb ...
Unpacking gettext-base (0.22.5-2) ...
Selecting previously unselected package libuchardet0:amd64.
Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_amd64.deb ...
Unpacking libuchardet0:amd64 (0.0.8-1+b2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../012-groff-base_1.23.0-5_amd64.deb ...
Unpacking groff-base (1.23.0-5) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../013-bsdextrautils_2.40.2-10_amd64.deb ...
Unpacking bsdextrautils (2.40.2-10) ...
Selecting previously unselected package libpipeline1:amd64.
Preparing to unpack .../014-libpipeline1_1.5.8-1_amd64.deb ...
Unpacking libpipeline1:amd64 (1.5.8-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../015-man-db_2.13.0-1_amd64.deb ...
Unpacking man-db (2.13.0-1) ...
Selecting previously unselected package architecture-properties:amd64.
Preparing to unpack .../016-architecture-properties_0.2.3_amd64.deb ...
Unpacking architecture-properties:amd64 (0.2.3) ...
Selecting previously unselected package m4.
Preparing to unpack .../017-m4_1.4.19-4_amd64.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../018-autoconf_2.72-3_all.deb ...
Unpacking autoconf (2.72-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../019-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../020-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../021-autopoint_0.22.5-2_all.deb ...
Unpacking autopoint (0.22.5-2) ...
Selecting previously unselected package libtcl8.6:amd64.
Preparing to unpack .../022-libtcl8.6_8.6.15+dfsg-2_amd64.deb ...
Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ...
Selecting previously unselected package libbrotli1:amd64.
Preparing to unpack .../023-libbrotli1_1.1.0-2+b5_amd64.deb ...
Unpacking libbrotli1:amd64 (1.1.0-2+b5) ...
Selecting previously unselected package libpng16-16t64:amd64.
Preparing to unpack .../024-libpng16-16t64_1.6.44-2_amd64.deb ...
Unpacking libpng16-16t64:amd64 (1.6.44-2) ...
Selecting previously unselected package libfreetype6:amd64.
Preparing to unpack .../025-libfreetype6_2.13.3+dfsg-1_amd64.deb ...
Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-mono.
Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ...
Unpacking fonts-dejavu-mono (2.37-8) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ...
Unpacking fonts-dejavu-core (2.37-8) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../028-fontconfig-config_2.15.0-1.1+b1_amd64.deb ...
Unpacking fontconfig-config (2.15.0-1.1+b1) ...
Selecting previously unselected package libfontconfig1:amd64.
Preparing to unpack .../029-libfontconfig1_2.15.0-1.1+b1_amd64.deb ...
Unpacking libfontconfig1:amd64 (2.15.0-1.1+b1) ...
Selecting previously unselected package libxau6:amd64.
Preparing to unpack .../030-libxau6_1%3a1.0.11-1_amd64.deb ...
Unpacking libxau6:amd64 (1:1.0.11-1) ...
Selecting previously unselected package libxdmcp6:amd64.
Preparing to unpack .../031-libxdmcp6_1%3a1.1.2-3+b2_amd64.deb ...
Unpacking libxdmcp6:amd64 (1:1.1.2-3+b2) ...
Selecting previously unselected package libxcb1:amd64.
Preparing to unpack .../032-libxcb1_1.17.0-2+b1_amd64.deb ...
Unpacking libxcb1:amd64 (1.17.0-2+b1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../033-libx11-data_2%3a1.8.10-2_all.deb ...
Unpacking libx11-data (2:1.8.10-2) ...
Selecting previously unselected package libx11-6:amd64.
Preparing to unpack .../034-libx11-6_2%3a1.8.10-2_amd64.deb ...
Unpacking libx11-6:amd64 (2:1.8.10-2) ...
Selecting previously unselected package libxrender1:amd64.
Preparing to unpack .../035-libxrender1_1%3a0.9.10-1.1+b2_amd64.deb ...
Unpacking libxrender1:amd64 (1:0.9.10-1.1+b2) ...
Selecting previously unselected package libxft2:amd64.
Preparing to unpack .../036-libxft2_2.3.6-1+b2_amd64.deb ...
Unpacking libxft2:amd64 (2.3.6-1+b2) ...
Selecting previously unselected package libxext6:amd64.
Preparing to unpack .../037-libxext6_2%3a1.3.4-1+b2_amd64.deb ...
Unpacking libxext6:amd64 (2:1.3.4-1+b2) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../038-x11-common_1%3a7.7+23.1_all.deb ...
Unpacking x11-common (1:7.7+23.1) ...
Selecting previously unselected package libxss1:amd64.
Preparing to unpack .../039-libxss1_1%3a1.2.3-1+b2_amd64.deb ...
Unpacking libxss1:amd64 (1:1.2.3-1+b2) ...
Selecting previously unselected package libtk8.6:amd64.
Preparing to unpack .../040-libtk8.6_8.6.15-1_amd64.deb ...
Unpacking libtk8.6:amd64 (8.6.15-1) ...
Selecting previously unselected package tk8.6-blt2.5.
Preparing to unpack .../041-tk8.6-blt2.5_2.5.3+dfsg-7_amd64.deb ...
Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Selecting previously unselected package blt.
Preparing to unpack .../042-blt_2.5.3+dfsg-7_amd64.deb ...
Unpacking blt (2.5.3+dfsg-7) ...
Selecting previously unselected package cython3.
Preparing to unpack .../043-cython3_3.0.11+dfsg-1_amd64.deb ...
Unpacking cython3 (3.0.11+dfsg-1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../044-libdebhelper-perl_13.20_all.deb ...
Unpacking libdebhelper-perl (13.20) ...
Selecting previously unselected package libtool.
Preparing to unpack .../045-libtool_2.4.7-8_all.deb ...
Unpacking libtool (2.4.7-8) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../046-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../047-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../048-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../049-dh-strip-nondeterminism_1.14.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.14.0-1) ...
Selecting previously unselected package libelf1t64:amd64.
Preparing to unpack .../050-libelf1t64_0.192-4_amd64.deb ...
Unpacking libelf1t64:amd64 (0.192-4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../051-dwz_0.15-1+b1_amd64.deb ...
Unpacking dwz (0.15-1+b1) ...
Selecting previously unselected package libicu72:amd64.
Preparing to unpack .../052-libicu72_72.1-5+b1_amd64.deb ...
Unpacking libicu72:amd64 (72.1-5+b1) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../053-libxml2_2.12.7+dfsg+really2.9.14-0.2_amd64.deb ...
Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../054-gettext_0.22.5-2_amd64.deb ...
Unpacking gettext (0.22.5-2) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../055-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../056-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../057-debhelper_13.20_all.deb ...
Unpacking debhelper (13.20) ...
Selecting previously unselected package python3-autocommand.
Preparing to unpack .../058-python3-autocommand_2.2.2-3_all.deb ...
Unpacking python3-autocommand (2.2.2-3) ...
Selecting previously unselected package python3-more-itertools.
Preparing to unpack .../059-python3-more-itertools_10.5.0-1_all.deb ...
Unpacking python3-more-itertools (10.5.0-1) ...
Selecting previously unselected package python3-typing-extensions.
Preparing to unpack .../060-python3-typing-extensions_4.12.2-2_all.deb ...
Unpacking python3-typing-extensions (4.12.2-2) ...
Selecting previously unselected package python3-typeguard.
Preparing to unpack .../061-python3-typeguard_4.4.1-1_all.deb ...
Unpacking python3-typeguard (4.4.1-1) ...
Selecting previously unselected package python3-inflect.
Preparing to unpack .../062-python3-inflect_7.3.1-2_all.deb ...
Unpacking python3-inflect (7.3.1-2) ...
Selecting previously unselected package python3-jaraco.context.
Preparing to unpack .../063-python3-jaraco.context_6.0.0-1_all.deb ...
Unpacking python3-jaraco.context (6.0.0-1) ...
Selecting previously unselected package python3-jaraco.functools.
Preparing to unpack .../064-python3-jaraco.functools_4.1.0-1_all.deb ...
Unpacking python3-jaraco.functools (4.1.0-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../065-python3-pkg-resources_75.2.0-1_all.deb ...
Unpacking python3-pkg-resources (75.2.0-1) ...
Selecting previously unselected package python3-jaraco.text.
Preparing to unpack .../066-python3-jaraco.text_4.0.0-1_all.deb ...
Unpacking python3-jaraco.text (4.0.0-1) ...
Selecting previously unselected package python3-zipp.
Preparing to unpack .../067-python3-zipp_3.21.0-1_all.deb ...
Unpacking python3-zipp (3.21.0-1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../068-python3-setuptools_75.2.0-1_all.deb ...
Unpacking python3-setuptools (75.2.0-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../069-dh-python_6.20241024_all.deb ...
Unpacking dh-python (6.20241024) ...
Selecting previously unselected package xml-core.
Preparing to unpack .../070-xml-core_0.19_all.deb ...
Unpacking xml-core (0.19) ...
Selecting previously unselected package docutils-common.
Preparing to unpack .../071-docutils-common_0.21.2+dfsg-2_all.deb ...
Unpacking docutils-common (0.21.2+dfsg-2) ...
Selecting previously unselected package fonts-lyx.
Preparing to unpack .../072-fonts-lyx_2.4.2.1-1_all.deb ...
Unpacking fonts-lyx (2.4.2.1-1) ...
Selecting previously unselected package fonts-mathjax.
Preparing to unpack .../073-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
Selecting previously unselected package fonts-open-sans.
Preparing to unpack .../074-fonts-open-sans_1.11-2_all.deb ...
Unpacking fonts-open-sans (1.11-2) ...
Selecting previously unselected package libaec0:amd64.
Preparing to unpack .../075-libaec0_1.1.3-1+b1_amd64.deb ...
Unpacking libaec0:amd64 (1.1.3-1+b1) ...
Selecting previously unselected package libblas3:amd64.
Preparing to unpack .../076-libblas3_3.12.0-3+b1_amd64.deb ...
Unpacking libblas3:amd64 (3.12.0-3+b1) ...
Selecting previously unselected package libsasl2-modules-db:amd64.
Preparing to unpack .../077-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ...
Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ...
Selecting previously unselected package libsasl2-2:amd64.
Preparing to unpack .../078-libsasl2-2_2.1.28+dfsg1-8_amd64.deb ...
Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) ...
Selecting previously unselected package libldap-2.5-0:amd64.
Preparing to unpack .../079-libldap-2.5-0_2.5.18+dfsg-3+b1_amd64.deb ...
Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ...
Selecting previously unselected package libnghttp2-14:amd64.
Preparing to unpack .../080-libnghttp2-14_1.64.0-1_amd64.deb ...
Unpacking libnghttp2-14:amd64 (1.64.0-1) ...
Selecting previously unselected package libpsl5t64:amd64.
Preparing to unpack .../081-libpsl5t64_0.21.2-1.1+b1_amd64.deb ...
Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ...
Selecting previously unselected package librtmp1:amd64.
Preparing to unpack .../082-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ...
Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Selecting previously unselected package libssh2-1t64:amd64.
Preparing to unpack .../083-libssh2-1t64_1.11.1-1_amd64.deb ...
Unpacking libssh2-1t64:amd64 (1.11.1-1) ...
Selecting previously unselected package libcurl4t64:amd64.
Preparing to unpack .../084-libcurl4t64_8.11.0-1_amd64.deb ...
Unpacking libcurl4t64:amd64 (8.11.0-1) ...
Selecting previously unselected package libdeflate0:amd64.
Preparing to unpack .../085-libdeflate0_1.22-1_amd64.deb ...
Unpacking libdeflate0:amd64 (1.22-1) ...
Selecting previously unselected package libexpat1-dev:amd64.
Preparing to unpack .../086-libexpat1-dev_2.6.4-1_amd64.deb ...
Unpacking libexpat1-dev:amd64 (2.6.4-1) ...
Selecting previously unselected package libfribidi0:amd64.
Preparing to unpack .../087-libfribidi0_1.0.15-1_amd64.deb ...
Unpacking libfribidi0:amd64 (1.0.15-1) ...
Selecting previously unselected package libgfortran5:amd64.
Preparing to unpack .../088-libgfortran5_14.2.0-8_amd64.deb ...
Unpacking libgfortran5:amd64 (14.2.0-8) ...
Selecting previously unselected package libglib2.0-0t64:amd64.
Preparing to unpack .../089-libglib2.0-0t64_2.82.2-2_amd64.deb ...
Unpacking libglib2.0-0t64:amd64 (2.82.2-2) ...
Selecting previously unselected package libgraphite2-3:amd64.
Preparing to unpack .../090-libgraphite2-3_1.3.14-2+b1_amd64.deb ...
Unpacking libgraphite2-3:amd64 (1.3.14-2+b1) ...
Selecting previously unselected package libharfbuzz0b:amd64.
Preparing to unpack .../091-libharfbuzz0b_10.0.1-1_amd64.deb ...
Unpacking libharfbuzz0b:amd64 (10.0.1-1) ...
Selecting previously unselected package libsz2:amd64.
Preparing to unpack .../092-libsz2_1.1.3-1+b1_amd64.deb ...
Unpacking libsz2:amd64 (1.1.3-1+b1) ...
Selecting previously unselected package libhdf5-103-1t64:amd64.
Preparing to unpack .../093-libhdf5-103-1t64_1.10.10+repack-4_amd64.deb ...
Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4) ...
Selecting previously unselected package libhdf5-hl-100t64:amd64.
Preparing to unpack .../094-libhdf5-hl-100t64_1.10.10+repack-4_amd64.deb ...
Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ...
Selecting previously unselected package libimagequant0:amd64.
Preparing to unpack .../095-libimagequant0_2.18.0-1+b2_amd64.deb ...
Unpacking libimagequant0:amd64 (2.18.0-1+b2) ...
Selecting previously unselected package libjbig0:amd64.
Preparing to unpack .../096-libjbig0_2.1-6.1+b2_amd64.deb ...
Unpacking libjbig0:amd64 (2.1-6.1+b2) ...
Selecting previously unselected package libjpeg62-turbo:amd64.
Preparing to unpack .../097-libjpeg62-turbo_1%3a2.1.5-3+b1_amd64.deb ...
Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../098-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../099-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
Selecting previously unselected package libjs-mathjax.
Preparing to unpack .../100-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../101-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../102-libjs-sphinxdoc_7.4.7-4_all.deb ...
Unpacking libjs-sphinxdoc (7.4.7-4) ...
Selecting previously unselected package libjson-perl.
Preparing to unpack .../103-libjson-perl_4.10000-1_all.deb ...
Unpacking libjson-perl (4.10000-1) ...
Selecting previously unselected package liblapack3:amd64.
Preparing to unpack .../104-liblapack3_3.12.0-3+b1_amd64.deb ...
Unpacking liblapack3:amd64 (3.12.0-3+b1) ...
Selecting previously unselected package liblbfgsb0:amd64.
Preparing to unpack .../105-liblbfgsb0_3.0+dfsg.4-1+b2_amd64.deb ...
Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Selecting previously unselected package liblcms2-2:amd64.
Preparing to unpack .../106-liblcms2-2_2.16-2_amd64.deb ...
Unpacking liblcms2-2:amd64 (2.16-2) ...
Selecting previously unselected package liblerc4:amd64.
Preparing to unpack .../107-liblerc4_4.0.0+ds-5_amd64.deb ...
Unpacking liblerc4:amd64 (4.0.0+ds-5) ...
Selecting previously unselected package liblzf1:amd64.
Preparing to unpack .../108-liblzf1_3.6-4+b2_amd64.deb ...
Unpacking liblzf1:amd64 (3.6-4+b2) ...
Selecting previously unselected package libopenjp2-7:amd64.
Preparing to unpack .../109-libopenjp2-7_2.5.0-2+b4_amd64.deb ...
Unpacking libopenjp2-7:amd64 (2.5.0-2+b4) ...
Selecting previously unselected package libpython3.12t64:amd64.
Preparing to unpack .../110-libpython3.12t64_3.12.7-3_amd64.deb ...
Unpacking libpython3.12t64:amd64 (3.12.7-3) ...
Selecting previously unselected package zlib1g-dev:amd64.
Preparing to unpack .../111-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ...
Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Selecting previously unselected package libpython3.12-dev:amd64.
Preparing to unpack .../112-libpython3.12-dev_3.12.7-3_amd64.deb ...
Unpacking libpython3.12-dev:amd64 (3.12.7-3) ...
Selecting previously unselected package libpython3-dev:amd64.
Preparing to unpack .../113-libpython3-dev_3.12.6-1_amd64.deb ...
Unpacking libpython3-dev:amd64 (3.12.6-1) ...
Selecting previously unselected package libpython3-all-dev:amd64.
Preparing to unpack .../114-libpython3-all-dev_3.12.6-1_amd64.deb ...
Unpacking libpython3-all-dev:amd64 (3.12.6-1) ...
Selecting previously unselected package libqhull-r8.0:amd64.
Preparing to unpack .../115-libqhull-r8.0_2020.2-6+b2_amd64.deb ...
Unpacking libqhull-r8.0:amd64 (2020.2-6+b2) ...
Selecting previously unselected package libraqm0:amd64.
Preparing to unpack .../116-libraqm0_0.10.1-1+b2_amd64.deb ...
Unpacking libraqm0:amd64 (0.10.1-1+b2) ...
Selecting previously unselected package libsharpyuv0:amd64.
Preparing to unpack .../117-libsharpyuv0_1.4.0-0.1+b1_amd64.deb ...
Unpacking libsharpyuv0:amd64 (1.4.0-0.1+b1) ...
Selecting previously unselected package libsimde-dev.
Preparing to unpack .../118-libsimde-dev_0.8.2-1_all.deb ...
Unpacking libsimde-dev (0.8.2-1) ...
Selecting previously unselected package libssw0:amd64.
Preparing to unpack .../119-libssw0_1.1-15+b1_amd64.deb ...
Unpacking libssw0:amd64 (1.1-15+b1) ...
Selecting previously unselected package libssw-dev:amd64.
Preparing to unpack .../120-libssw-dev_1.1-15+b1_amd64.deb ...
Unpacking libssw-dev:amd64 (1.1-15+b1) ...
Selecting previously unselected package libwebp7:amd64.
Preparing to unpack .../121-libwebp7_1.4.0-0.1+b1_amd64.deb ...
Unpacking libwebp7:amd64 (1.4.0-0.1+b1) ...
Selecting previously unselected package libtiff6:amd64.
Preparing to unpack .../122-libtiff6_4.5.1+git230720-5_amd64.deb ...
Unpacking libtiff6:amd64 (4.5.1+git230720-5) ...
Selecting previously unselected package libwebpdemux2:amd64.
Preparing to unpack .../123-libwebpdemux2_1.4.0-0.1+b1_amd64.deb ...
Unpacking libwebpdemux2:amd64 (1.4.0-0.1+b1) ...
Selecting previously unselected package libwebpmux3:amd64.
Preparing to unpack .../124-libwebpmux3_1.4.0-0.1+b1_amd64.deb ...
Unpacking libwebpmux3:amd64 (1.4.0-0.1+b1) ...
Selecting previously unselected package libxslt1.1:amd64.
Preparing to unpack .../125-libxslt1.1_1.1.35-1.1+b1_amd64.deb ...
Unpacking libxslt1.1:amd64 (1.1.35-1.1+b1) ...
Selecting previously unselected package python-babel-localedata.
Preparing to unpack .../126-python-babel-localedata_2.14.0-1_all.deb ...
Unpacking python-babel-localedata (2.14.0-1) ...
Selecting previously unselected package python-biom-format-doc.
Preparing to unpack .../127-python-biom-format-doc_2.1.16-1_all.deb ...
Unpacking python-biom-format-doc (2.1.16-1) ...
Selecting previously unselected package python-matplotlib-data.
Preparing to unpack .../128-python-matplotlib-data_3.8.3-3_all.deb ...
Unpacking python-matplotlib-data (3.8.3-3) ...
Selecting previously unselected package python-numpy-doc.
Preparing to unpack .../129-python-numpy-doc_1%3a1.26.4+ds-11_all.deb ...
Unpacking python-numpy-doc (1:1.26.4+ds-11) ...
Selecting previously unselected package python-pandas-doc.
Preparing to unpack .../130-python-pandas-doc_2.2.3+dfsg-5_all.deb ...
Unpacking python-pandas-doc (2.2.3+dfsg-5) ...
Selecting previously unselected package python-scipy-doc.
Preparing to unpack .../131-python-scipy-doc_1.13.1-5_all.deb ...
Unpacking python-scipy-doc (1.13.1-5) ...
Selecting previously unselected package python3-alabaster.
Preparing to unpack .../132-python3-alabaster_0.7.16-0.1_all.deb ...
Unpacking python3-alabaster (0.7.16-0.1) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../133-python3-all_3.12.6-1_amd64.deb ...
Unpacking python3-all (3.12.6-1) ...
Selecting previously unselected package python3.12-dev.
Preparing to unpack .../134-python3.12-dev_3.12.7-3_amd64.deb ...
Unpacking python3.12-dev (3.12.7-3) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../135-python3-dev_3.12.6-1_amd64.deb ...
Unpacking python3-dev (3.12.6-1) ...
Selecting previously unselected package python3-all-dev.
Preparing to unpack .../136-python3-all-dev_3.12.6-1_amd64.deb ...
Unpacking python3-all-dev (3.12.6-1) ...
Selecting previously unselected package python3-appdirs.
Preparing to unpack .../137-python3-appdirs_1.4.4-4_all.deb ...
Unpacking python3-appdirs (1.4.4-4) ...
Selecting previously unselected package python3-asttokens.
Preparing to unpack .../138-python3-asttokens_2.4.1-2_all.deb ...
Unpacking python3-asttokens (2.4.1-2) ...
Selecting previously unselected package python3-attr.
Preparing to unpack .../139-python3-attr_24.2.0-1_all.deb ...
Unpacking python3-attr (24.2.0-1) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../140-python3-tz_2024.1-2_all.deb ...
Unpacking python3-tz (2024.1-2) ...
Selecting previously unselected package python3-babel.
Preparing to unpack .../141-python3-babel_2.14.0-1_all.deb ...
Unpacking python3-babel (2.14.0-1) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../142-python3-numpy_1%3a1.26.4+ds-11_amd64.deb ...
Unpacking python3-numpy (1:1.26.4+ds-11) ...
Selecting previously unselected package python3-h5py-serial.
Preparing to unpack .../143-python3-h5py-serial_3.11.0-8_amd64.deb ...
Unpacking python3-h5py-serial (3.11.0-8) ...
Selecting previously unselected package python3-h5py.
Preparing to unpack .../144-python3-h5py_3.11.0-8_all.deb ...
Unpacking python3-h5py (3.11.0-8) ...
Selecting previously unselected package python3-colorama.
Preparing to unpack .../145-python3-colorama_0.4.6-4_all.deb ...
Unpacking python3-colorama (0.4.6-4) ...
Selecting previously unselected package python3-click.
Preparing to unpack .../146-python3-click_8.1.7-2_all.deb ...
Unpacking python3-click (8.1.7-2) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../147-python3-dateutil_2.9.0-3_all.deb ...
Unpacking python3-dateutil (2.9.0-3) ...
Selecting previously unselected package python3-pandas-lib:amd64.
Preparing to unpack .../148-python3-pandas-lib_2.2.3+dfsg-5_amd64.deb ...
Unpacking python3-pandas-lib:amd64 (2.2.3+dfsg-5) ...
Selecting previously unselected package python3-pandas.
Preparing to unpack .../149-python3-pandas_2.2.3+dfsg-5_all.deb ...
Unpacking python3-pandas (2.2.3+dfsg-5) ...
Selecting previously unselected package python3-decorator.
Preparing to unpack .../150-python3-decorator_5.1.1-5_all.deb ...
Unpacking python3-decorator (5.1.1-5) ...
Selecting previously unselected package python3-scipy.
Preparing to unpack .../151-python3-scipy_1.13.1-5_amd64.deb ...
Unpacking python3-scipy (1.13.1-5) ...
Selecting previously unselected package python3-biom-format.
Preparing to unpack .../152-python3-biom-format_2.1.16-1+b1_amd64.deb ...
Unpacking python3-biom-format (2.1.16-1+b1) ...
Selecting previously unselected package python3-brotli.
Preparing to unpack .../153-python3-brotli_1.1.0-2+b5_amd64.deb ...
Unpacking python3-brotli (1.1.0-2+b5) ...
Selecting previously unselected package python3-soupsieve.
Preparing to unpack .../154-python3-soupsieve_2.6-1_all.deb ...
Unpacking python3-soupsieve (2.6-1) ...
Selecting previously unselected package python3-bs4.
Preparing to unpack .../155-python3-bs4_4.12.3-3_all.deb ...
Unpacking python3-bs4 (4.12.3-3) ...
Selecting previously unselected package python3-certifi.
Preparing to unpack .../156-python3-certifi_2024.8.30+dfsg-1_all.deb ...
Unpacking python3-certifi (2024.8.30+dfsg-1) ...
Selecting previously unselected package python3-charset-normalizer.
Preparing to unpack .../157-python3-charset-normalizer_3.4.0-1_amd64.deb ...
Unpacking python3-charset-normalizer (3.4.0-1) ...
Selecting previously unselected package python3-idna.
Preparing to unpack .../158-python3-idna_3.8-2_all.deb ...
Unpacking python3-idna (3.8-2) ...
Selecting previously unselected package python3-urllib3.
Preparing to unpack .../159-python3-urllib3_2.0.7-2_all.deb ...
Unpacking python3-urllib3 (2.0.7-2) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../160-python3-chardet_5.2.0+dfsg-1_all.deb ...
Unpacking python3-chardet (5.2.0+dfsg-1) ...
Selecting previously unselected package python3-requests.
Preparing to unpack .../161-python3-requests_2.32.3+dfsg-1_all.deb ...
Unpacking python3-requests (2.32.3+dfsg-1) ...
Selecting previously unselected package python3-msgpack.
Preparing to unpack .../162-python3-msgpack_1.0.3-3+b2_amd64.deb ...
Unpacking python3-msgpack (1.0.3-3+b2) ...
Selecting previously unselected package python3-cachecontrol.
Preparing to unpack .../163-python3-cachecontrol_0.14.1-1_all.deb ...
Unpacking python3-cachecontrol (0.14.1-1) ...
Selecting previously unselected package python3-contourpy.
Preparing to unpack .../164-python3-contourpy_1.3.0-2_amd64.deb ...
Unpacking python3-contourpy (1.3.0-2) ...
Selecting previously unselected package python3-cycler.
Preparing to unpack .../165-python3-cycler_0.12.1-1_all.deb ...
Unpacking python3-cycler (0.12.1-1) ...
Selecting previously unselected package python3-defusedxml.
Preparing to unpack .../166-python3-defusedxml_0.7.1-2_all.deb ...
Unpacking python3-defusedxml (0.7.1-2) ...
Selecting previously unselected package python3.12-doc.
Preparing to unpack .../167-python3.12-doc_3.12.7-3_all.deb ...
Unpacking python3.12-doc (3.12.7-3) ...
Selecting previously unselected package python3-doc.
Preparing to unpack .../168-python3-doc_3.12.6-1_all.deb ...
Unpacking python3-doc (3.12.6-1) ...
Selecting previously unselected package python3-roman.
Preparing to unpack .../169-python3-roman_4.2-1_all.deb ...
Unpacking python3-roman (4.2-1) ...
Selecting previously unselected package python3-docutils.
Preparing to unpack .../170-python3-docutils_0.21.2+dfsg-2_all.deb ...
Unpacking python3-docutils (0.21.2+dfsg-2) ...
Selecting previously unselected package python3-executing.
Preparing to unpack .../171-python3-executing_2.1.0-0.1_all.deb ...
Unpacking python3-executing (2.1.0-0.1) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../172-python3-six_1.16.0-7_all.deb ...
Unpacking python3-six (1.16.0-7) ...
Selecting previously unselected package python3-fs.
Preparing to unpack .../173-python3-fs_2.4.16-4_all.deb ...
Unpacking python3-fs (2.4.16-4) ...
Selecting previously unselected package python3-lxml:amd64.
Preparing to unpack .../174-python3-lxml_5.3.0-1_amd64.deb ...
Unpacking python3-lxml:amd64 (5.3.0-1) ...
Selecting previously unselected package python3-lz4.
Preparing to unpack .../175-python3-lz4_4.0.2+dfsg-1+b4_amd64.deb ...
Unpacking python3-lz4 (4.0.2+dfsg-1+b4) ...
Selecting previously unselected package python3-mpmath.
Preparing to unpack .../176-python3-mpmath_1.3.0-1_all.deb ...
Unpacking python3-mpmath (1.3.0-1) ...
Selecting previously unselected package python3-sympy.
Preparing to unpack .../177-python3-sympy_1.13.3-1_all.deb ...
Unpacking python3-sympy (1.13.3-1) ...
Selecting previously unselected package python3-ufolib2.
Preparing to unpack .../178-python3-ufolib2_0.16.1+dfsg1-1_all.deb ...
Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ...
Selecting previously unselected package unicode-data.
Preparing to unpack .../179-unicode-data_15.1.0-1_all.deb ...
Unpacking unicode-data (15.1.0-1) ...
Selecting previously unselected package python3-fonttools.
Preparing to unpack .../180-python3-fonttools_4.54.1-4_amd64.deb ...
Unpacking python3-fonttools (4.54.1-4) ...
Selecting previously unselected package python3-hdmedians.
Preparing to unpack .../181-python3-hdmedians_0.14.2-5.1+b1_amd64.deb ...
Unpacking python3-hdmedians (0.14.2-5.1+b1) ...
Selecting previously unselected package python3-imagesize.
Preparing to unpack .../182-python3-imagesize_1.4.1-1_all.deb ...
Unpacking python3-imagesize (1.4.1-1) ...
Selecting previously unselected package python3-iniconfig.
Preparing to unpack .../183-python3-iniconfig_1.1.1-2_all.deb ...
Unpacking python3-iniconfig (1.1.1-2) ...
Selecting previously unselected package python3-parso.
Preparing to unpack .../184-python3-parso_0.8.3-1_all.deb ...
Unpacking python3-parso (0.8.3-1) ...
Selecting previously unselected package python3-typeshed.
Preparing to unpack .../185-python3-typeshed_0.0~git20231111.6764465-3_all.deb ...
Unpacking python3-typeshed (0.0~git20231111.6764465-3) ...
Selecting previously unselected package python3-jedi.
Preparing to unpack .../186-python3-jedi_0.19.1+ds1-1_all.deb ...
Unpacking python3-jedi (0.19.1+ds1-1) ...
Selecting previously unselected package python3-traitlets.
Preparing to unpack .../187-python3-traitlets_5.14.3+really5.14.3-1_all.deb ...
Unpacking python3-traitlets (5.14.3+really5.14.3-1) ...
Selecting previously unselected package python3-matplotlib-inline.
Preparing to unpack .../188-python3-matplotlib-inline_0.1.6-2_all.deb ...
Unpacking python3-matplotlib-inline (0.1.6-2) ...
Selecting previously unselected package python3-wcwidth.
Preparing to unpack .../189-python3-wcwidth_0.2.13+dfsg1-1_all.deb ...
Unpacking python3-wcwidth (0.2.13+dfsg1-1) ...
Selecting previously unselected package python3-prompt-toolkit.
Preparing to unpack .../190-python3-prompt-toolkit_3.0.48-1_all.deb ...
Unpacking python3-prompt-toolkit (3.0.48-1) ...
Selecting previously unselected package python3-pygments.
Preparing to unpack .../191-python3-pygments_2.18.0+dfsg-1_all.deb ...
Unpacking python3-pygments (2.18.0+dfsg-1) ...
Selecting previously unselected package python3-pure-eval.
Preparing to unpack .../192-python3-pure-eval_0.2.3-1_all.deb ...
Unpacking python3-pure-eval (0.2.3-1) ...
Selecting previously unselected package python3-stack-data.
Preparing to unpack .../193-python3-stack-data_0.6.3-1_all.deb ...
Unpacking python3-stack-data (0.6.3-1) ...
Selecting previously unselected package python3-ptyprocess.
Preparing to unpack .../194-python3-ptyprocess_0.7.0-6_all.deb ...
Unpacking python3-ptyprocess (0.7.0-6) ...
Selecting previously unselected package python3-pexpect.
Preparing to unpack .../195-python3-pexpect_4.9-3_all.deb ...
Unpacking python3-pexpect (4.9-3) ...
Selecting previously unselected package python3-ipython.
Preparing to unpack .../196-python3-ipython_8.29.0-1_all.deb ...
Unpacking python3-ipython (8.29.0-1) ...
Selecting previously unselected package python3-markupsafe.
Preparing to unpack .../197-python3-markupsafe_2.1.5-1+b1_amd64.deb ...
Unpacking python3-markupsafe (2.1.5-1+b1) ...
Selecting previously unselected package python3-jinja2.
Preparing to unpack .../198-python3-jinja2_3.1.3-1_all.deb ...
Unpacking python3-jinja2 (3.1.3-1) ...
Selecting previously unselected package python3-joblib.
Preparing to unpack .../199-python3-joblib_1.3.2-5_all.deb ...
Unpacking python3-joblib (1.3.2-5) ...
Selecting previously unselected package python3-kiwisolver.
Preparing to unpack .../200-python3-kiwisolver_1.4.7-2_amd64.deb ...
Unpacking python3-kiwisolver (1.4.7-2) ...
Selecting previously unselected package python3-pil:amd64.
Preparing to unpack .../201-python3-pil_10.4.0-1_amd64.deb ...
Unpacking python3-pil:amd64 (10.4.0-1) ...
Selecting previously unselected package python3.12-tk.
Preparing to unpack .../202-python3.12-tk_3.12.7-3_amd64.deb ...
Unpacking python3.12-tk (3.12.7-3) ...
Selecting previously unselected package python3.13-tk.
Preparing to unpack .../203-python3.13-tk_3.13.0-1_amd64.deb ...
Unpacking python3.13-tk (3.13.0-1) ...
Selecting previously unselected package python3-tk:amd64.
Preparing to unpack .../204-python3-tk_3.12.6-1_amd64.deb ...
Unpacking python3-tk:amd64 (3.12.6-1) ...
Selecting previously unselected package python3-pil.imagetk:amd64.
Preparing to unpack .../205-python3-pil.imagetk_10.4.0-1_amd64.deb ...
Unpacking python3-pil.imagetk:amd64 (10.4.0-1) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../206-python3-pyparsing_3.1.2-1_all.deb ...
Unpacking python3-pyparsing (3.1.2-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../207-python3-packaging_24.1-1_all.deb ...
Unpacking python3-packaging (24.1-1) ...
Selecting previously unselected package python3-matplotlib.
Preparing to unpack .../208-python3-matplotlib_3.8.3-3_amd64.deb ...
Unpacking python3-matplotlib (3.8.3-3) ...
Selecting previously unselected package python3-natsort.
Preparing to unpack .../209-python3-natsort_8.0.2-2_all.deb ...
Unpacking python3-natsort (8.0.2-2) ...
Selecting previously unselected package sphinx-common.
Preparing to unpack .../210-sphinx-common_7.4.7-4_all.deb ...
Unpacking sphinx-common (7.4.7-4) ...
Selecting previously unselected package python3-snowballstemmer.
Preparing to unpack .../211-python3-snowballstemmer_2.2.0-4_all.deb ...
Unpacking python3-snowballstemmer (2.2.0-4) ...
Selecting previously unselected package python3-sphinx.
Preparing to unpack .../212-python3-sphinx_7.4.7-4_all.deb ...
Unpacking python3-sphinx (7.4.7-4) ...
Selecting previously unselected package python3-tabulate.
Preparing to unpack .../213-python3-tabulate_0.9.0-1_all.deb ...
Unpacking python3-tabulate (0.9.0-1) ...
Selecting previously unselected package python3-numpydoc.
Preparing to unpack .../214-python3-numpydoc_1.6.0-2_all.deb ...
Unpacking python3-numpydoc (1.6.0-2) ...
Selecting previously unselected package python3-patsy.
Preparing to unpack .../215-python3-patsy_0.5.6-1_all.deb ...
Unpacking python3-patsy (0.5.6-1) ...
Selecting previously unselected package python3-pluggy.
Preparing to unpack .../216-python3-pluggy_1.5.0-1_all.deb ...
Unpacking python3-pluggy (1.5.0-1) ...
Selecting previously unselected package python3-pydata-sphinx-theme.
Preparing to unpack .../217-python3-pydata-sphinx-theme_0.15.4+dfsg-2_all.deb ...
Unpacking python3-pydata-sphinx-theme (0.15.4+dfsg-2) ...
Selecting previously unselected package python3-pytest.
Preparing to unpack .../218-python3-pytest_8.3.3-1_all.deb ...
Unpacking python3-pytest (8.3.3-1) ...
Selecting previously unselected package python3-threadpoolctl.
Preparing to unpack .../219-python3-threadpoolctl_3.1.0-1_all.deb ...
Unpacking python3-threadpoolctl (3.1.0-1) ...
Selecting previously unselected package python3-sklearn-lib:amd64.
Preparing to unpack .../220-python3-sklearn-lib_1.4.2+dfsg-6_amd64.deb ...
Unpacking python3-sklearn-lib:amd64 (1.4.2+dfsg-6) ...
Selecting previously unselected package python3-sklearn.
Preparing to unpack .../221-python3-sklearn_1.4.2+dfsg-6_all.deb ...
Unpacking python3-sklearn (1.4.2+dfsg-6) ...
Selecting previously unselected package python3-sphinx-copybutton.
Preparing to unpack .../222-python3-sphinx-copybutton_0.5.2-2_all.deb ...
Unpacking python3-sphinx-copybutton (0.5.2-2) ...
Selecting previously unselected package python3-sphinx-design.
Preparing to unpack .../223-python3-sphinx-design_0.6.1-1_all.deb ...
Unpacking python3-sphinx-design (0.6.1-1) ...
Selecting previously unselected package python3-statsmodels-lib:amd64.
Preparing to unpack .../224-python3-statsmodels-lib_0.14.4+dfsg-1_amd64.deb ...
Unpacking python3-statsmodels-lib:amd64 (0.14.4+dfsg-1) ...
Selecting previously unselected package python3-statsmodels.
Preparing to unpack .../225-python3-statsmodels_0.14.4+dfsg-1_all.deb ...
Unpacking python3-statsmodels (0.14.4+dfsg-1) ...
Setting up media-types (10.1.0) ...
Setting up libpipeline1:amd64 (1.5.8-1) ...
Setting up libgraphite2-3:amd64 (1.3.14-2+b1) ...
Setting up libsimde-dev (0.8.2-1) ...
Setting up liblcms2-2:amd64 (2.16-2) ...
Setting up libsharpyuv0:amd64 (1.4.0-0.1+b1) ...
Setting up libxau6:amd64 (1:1.0.11-1) ...
Setting up libxdmcp6:amd64 (1:1.1.2-3+b2) ...
Setting up libkeyutils1:amd64 (1.6.3-4) ...
Setting up libxcb1:amd64 (1.17.0-2+b1) ...
Setting up fonts-mathjax (2.7.9+dfsg-1) ...
Setting up libicu72:amd64 (72.1-5+b1) ...
Setting up liblerc4:amd64 (4.0.0+ds-5) ...
Setting up bsdextrautils (2.40.2-10) ...
Setting up libjs-mathjax (2.7.9+dfsg-1) ...
Setting up libmagic-mgc (1:5.45-3+b1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up architecture-properties:amd64 (0.2.3) ...
Setting up libtirpc-common (1.3.4+ds-1.3) ...
Setting up fonts-lyx (2.4.2.1-1) ...
Setting up libdebhelper-perl (13.20) ...
Setting up libbrotli1:amd64 (1.1.0-2+b5) ...
Setting up libmagic1t64:amd64 (1:5.45-3+b1) ...
Setting up x11-common (1:7.7+23.1) ...
invoke-rc.d: could not determine current runlevel
Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ...
Setting up libnghttp2-14:amd64 (1.64.0-1) ...
Setting up libdeflate0:amd64 (1.22-1) ...
Setting up gettext-base (0.22.5-2) ...
Setting up m4 (1.4.19-4) ...
Setting up libqhull-r8.0:amd64 (2020.2-6+b2) ...
Setting up libcom-err2:amd64 (1.47.1-1+b1) ...
Setting up file (1:5.45-3+b1) ...
Setting up fonts-open-sans (1.11-2) ...
Setting up libjbig0:amd64 (2.1-6.1+b2) ...
Setting up libaec0:amd64 (1.1.3-1+b1) ...
Setting up libelf1t64:amd64 (0.192-4) ...
Setting up python-babel-localedata (2.14.0-1) ...
Setting up libkrb5support0:amd64 (1.21.3-3) ...
Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ...
Setting up tzdata (2024b-3) ...

Current default time zone: 'Etc/UTC'
Local time is now:      Tue Nov 12 12:32:56 UTC 2024.
Universal Time is now:  Tue Nov 12 12:32:56 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up unicode-data (15.1.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libglib2.0-0t64:amd64 (2.82.2-2) ...
No schema files found: doing nothing.
Setting up libblas3:amd64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
Setting up libexpat1-dev:amd64 (2.6.4-1) ...
Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ...
Setting up libx11-data (2:1.8.10-2) ...
Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up liblzf1:amd64 (3.6-4+b2) ...
Setting up libfribidi0:amd64 (1.0.15-1) ...
Setting up libimagequant0:amd64 (2.18.0-1+b2) ...
Setting up libproc2-0:amd64 (2:4.0.4-6) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libpng16-16t64:amd64 (1.6.44-2) ...
Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ...
Setting up autopoint (0.22.5-2) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up libk5crypto3:amd64 (1.21.3-3) ...
Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ...
Setting up libgfortran5:amd64 (14.2.0-8) ...
Setting up autoconf (2.72-3) ...
Setting up libwebp7:amd64 (1.4.0-0.1+b1) ...
Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up libtiff6:amd64 (4.5.1+git230720-5) ...
Setting up libuchardet0:amd64 (0.0.8-1+b2) ...
Setting up procps (2:4.0.4-6) ...
Setting up libjson-perl (4.10000-1) ...
Setting up libopenjp2-7:amd64 (2.5.0-2+b4) ...
Setting up libx11-6:amd64 (2:1.8.10-2) ...
Setting up netbase (6.4) ...
Setting up sgml-base (1.31) ...
Setting up libkrb5-3:amd64 (1.21.3-3) ...
Setting up libssh2-1t64:amd64 (1.11.1-1) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up python-matplotlib-data (3.8.3-3) ...
Setting up openssl (3.3.2-2) ...
Setting up libwebpmux3:amd64 (1.4.0-0.1+b1) ...
Setting up libssw0:amd64 (1.1-15+b1) ...
Setting up readline-common (8.2-5) ...
Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2) ...
Setting up libsz2:amd64 (1.1.3-1+b1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up liblapack3:amd64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
Setting up gettext (0.22.5-2) ...
Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ...
Setting up libssw-dev:amd64 (1.1-15+b1) ...
Setting up libtool (2.4.7-8) ...
Setting up fontconfig-config (2.15.0-1.1+b1) ...
Setting up libwebpdemux2:amd64 (1.4.0-0.1+b1) ...
Setting up libxext6:amd64 (2:1.3.4-1+b2) ...
Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ...
Setting up python-scipy-doc (1.13.1-5) ...
Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ...
Setting up libjs-sphinxdoc (7.4.7-4) ...
Setting up libreadline8t64:amd64 (8.2-5) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up groff-base (1.23.0-5) ...
Setting up xml-core (0.19) ...
Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ...
Setting up libharfbuzz0b:amd64 (10.0.1-1) ...
Setting up libxss1:amd64 (1:1.2.3-1+b2) ...
Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ...
Setting up python3.12-doc (3.12.7-3) ...
Setting up python3-doc (3.12.6-1) ...
Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Setting up python-numpy-doc (1:1.26.4+ds-11) ...
Setting up libxft2:amd64 (2.3.6-1+b2) ...
Setting up libcurl4t64:amd64 (8.11.0-1) ...
Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
Setting up python-pandas-doc (2.2.3+dfsg-5) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libtk8.6:amd64 (8.6.15-1) ...
Setting up python3.12-tk (3.12.7-3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3.13-tk (3.13.0-1) ...
Setting up python-biom-format-doc (2.1.16-1) ...
Setting up libraqm0:amd64 (0.10.1-1+b2) ...
Setting up sphinx-common (7.4.7-4) ...
Setting up libnsl2:amd64 (1.3.0-3+b3) ...
Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ...
Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ...
Setting up blt (2.5.3+dfsg-7) ...
Setting up python3.12 (3.12.7-3) ...
Setting up debhelper (13.20) ...
Setting up libpython3.12t64:amd64 (3.12.7-3) ...
Setting up libpython3-stdlib:amd64 (3.12.6-1) ...
Setting up python3 (3.12.6-1) ...
Setting up libpython3.12-dev:amd64 (3.12.7-3) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up python3-markupsafe (2.1.5-1+b1) ...
Setting up python3-tz (2024.1-2) ...
Setting up python3-natsort (8.0.2-2) ...
Setting up python3-six (1.16.0-7) ...
Setting up python3-pil:amd64 (10.4.0-1) ...
Setting up python3-roman (4.2-1) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-jinja2 (3.1.3-1) ...
Setting up python3-packaging (24.1-1) ...
Setting up python3-wcwidth (0.2.13+dfsg1-1) ...
Setting up python3-pyparsing (3.1.2-1) ...
Setting up python3-certifi (2024.8.30+dfsg-1) ...
Setting up python3-typeshed (0.0~git20231111.6764465-3) ...
Setting up python3-snowballstemmer (2.2.0-4) ...
Setting up python3-brotli (1.1.0-2+b5) ...
Setting up python3-cycler (0.12.1-1) ...
Setting up python3-kiwisolver (1.4.7-2) ...
Setting up python3-idna (3.8-2) ...
Setting up python3.12-dev (3.12.7-3) ...
Setting up cython3 (3.0.11+dfsg-1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up python3-urllib3 (2.0.7-2) ...
Setting up python3-pluggy (1.5.0-1) ...
Setting up python3-lxml:amd64 (5.3.0-1) ...
Setting up python3-traitlets (5.14.3+really5.14.3-1) ...
Setting up python3-dateutil (2.9.0-3) ...
Setting up python3-msgpack (1.0.3-3+b2) ...
Setting up python3-mpmath (1.3.0-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up python3-soupsieve (2.6-1) ...
Setting up python3-imagesize (1.4.1-1) ...
Setting up python3-ptyprocess (0.7.0-6) ...
Setting up python3-prompt-toolkit (3.0.48-1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sympy (1.13.3-1) ...
Setting up python3-attr (24.2.0-1) ...
Setting up python3-pure-eval (0.2.3-1) ...
Setting up libpython3-dev:amd64 (3.12.6-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up python3-parso (0.8.3-1) ...
Setting up python3-colorama (0.4.6-4) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b4) ...
Setting up python3-defusedxml (0.7.1-2) ...
Setting up python3-asttokens (2.4.1-2) ...
Setting up python3-charset-normalizer (3.4.0-1) ...
Setting up python3-pytest (8.3.3-1) ...
Setting up python3-alabaster (0.7.16-0.1) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up python3-threadpoolctl (3.1.0-1) ...
Setting up python3-tabulate (0.9.0-1) ...
Setting up python3-all (3.12.6-1) ...
Setting up python3-tk:amd64 (3.12.6-1) ...
Setting up python3-click (8.1.7-2) ...
Setting up python3-bs4 (4.12.3-3) ...
Setting up python3-matplotlib-inline (0.1.6-2) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-pil.imagetk:amd64 (10.4.0-1) ...
Setting up python3-executing (2.1.0-0.1) ...
Setting up libpython3-all-dev:amd64 (3.12.6-1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-pexpect (4.9-3) ...
Setting up python3-dev (3.12.6-1) ...
Setting up python3-stack-data (0.6.3-1) ...
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up python3-all-dev (3.12.6-1) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up python3-jedi (0.19.1+ds1-1) ...
Setting up python3-joblib (1.3.2-5) ...
Setting up python3-babel (2.14.0-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-fs (2.4.16-4) ...
Setting up python3-pygments (2.18.0+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up python3-ipython (8.29.0-1) ...
Setting up python3-requests (2.32.3+dfsg-1) ...
Setting up python3-numpy (1:1.26.4+ds-11) ...
Setting up python3-hdmedians (0.14.2-5.1+b1) ...
Setting up python3-contourpy (1.3.0-2) ...
Setting up python3-cachecontrol (0.14.1-1) ...
Setting up python3-statsmodels-lib:amd64 (0.14.4+dfsg-1) ...
Setting up dh-python (6.20241024) ...
Setting up python3-scipy (1.13.1-5) ...
Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5) ...
Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-6) ...
Setting up python3-h5py-serial (3.11.0-8) ...
Setting up python3-patsy (0.5.6-1) ...
Setting up python3-pandas (2.2.3+dfsg-5) ...
Setting up python3-h5py (3.11.0-8) ...
Setting up python3-sklearn (1.4.2+dfsg-6) ...
Setting up python3-statsmodels (0.14.4+dfsg-1) ...
Setting up python3-biom-format (2.1.16-1+b1) ...
Setting up python3-ufolib2 (0.16.1+dfsg1-1) ...
Setting up python3-fonttools (4.54.1-4) ...
Setting up python3-matplotlib (3.8.3-3) ...
Processing triggers for libc-bin (2.40-3) ...
Processing triggers for sgml-base (1.31) ...
Setting up docutils-common (0.21.2+dfsg-2) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.21.2+dfsg-2) ...
Setting up python3-sphinx (7.4.7-4) ...
Setting up python3-sphinx-copybutton (0.5.2-2) ...
Setting up python3-sphinx-design (0.6.1-1) ...
Setting up python3-numpydoc (1.6.0-2) ...
Setting up python3-pydata-sphinx-theme (0.15.4+dfsg-2) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/python-skbio-0.6.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../python-skbio_0.6.2-3_source.changes
dpkg-buildpackage: info: source package python-skbio
dpkg-buildpackage: info: source version 0.6.2-3
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean --with sphinxdoc --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
if [ "`find . -name "*.pyo"`" = "" ] ; then echo no need to clean up ; else dh_auto_clean; fi
no need to clean up
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   dh_autoreconf_clean -O--buildsystem=pybuild
   debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
if [ -f simde-sse2.h.orig ] ; then mv simde-sse2.h.orig simde-sse2.h ; fi
dh_clean
find ./skbio -name '*.so' -delete
find ./skbio -name '*.o' -delete
rm -rf doc/build build doc/source/generated
find doc -name *.doctree -delete
rm -rf .pybuild
rm -f scikit_bio.egg-info/PKG-INFO scikit_bio.egg-info/SOURCES.txt scikit_bio.egg-info/dependency_links.txt scikit_bio.egg-info/requires.txt scikit_bio.egg-info/top_level.txt
rm -f skbio/alignment/_ssw_wrapper.c skbio/diversity/_phylogenetic.c skbio/stats/__subsample.c skbio/metadata/_intersection.c
mv simde-sse2.h.orig simde-sse2.h || true
mv: cannot stat 'simde-sse2.h.orig': No such file or directory
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
 debian/rules binary
dh binary --with sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
mv simde-sse2.h simde-sse2.h.orig
rm -f skbio/alignment/_ssw_wrapper.c skbio/diversity/_phylogenetic.c skbio/stats/__subsample.c skbio/metadata/_intersection.c
dh_auto_configure
I: pybuild base:311: python3.12 setup.py config 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/alignment/_ssw_wrapper.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/diversity/_phylogenetic.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/metadata/_intersection.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/distance/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/ordination/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
[1/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
[2/5] Cythonizing skbio/diversity/_phylogenetic.pyx
[3/5] Cythonizing skbio/metadata/_intersection.pyx
[4/5] Cythonizing skbio/stats/distance/_cutils.pyx
[5/5] Cythonizing skbio/stats/ordination/_cutils.pyx
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running config
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
dh_auto_build
I: pybuild base:311: /usr/bin/python3 setup.py build 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/metadata/_intersection.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/ordination/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/alignment/_ssw_wrapper.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/diversity/_phylogenetic.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/distance/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
[1/5] Cythonizing skbio/metadata/_intersection.pyx
[2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
[3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
[4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
[5/5] Cythonizing skbio/stats/distance/_cutils.pyx
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running build
running build_py
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio
copying skbio/workflow.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio
copying skbio/_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio
copying skbio/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio
copying skbio/test.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/registry.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/_iosources.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/_fileobject.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/util.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
copying skbio/io/_warning.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
copying skbio/tree/_majority_rule.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
copying skbio/tree/_nj.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
copying skbio/tree/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
copying skbio/tree/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
copying skbio/tree/_tree.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/_pairwise.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/_path.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/_tabular_msa.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
copying skbio/alignment/_indexing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/_subsample.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/power.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/composition.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/_misc.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
copying skbio/stats/gradient.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests
copying skbio/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests
copying skbio/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests
copying skbio/tests/test_workflow.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding
copying skbio/embedding/_embedding.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding
copying skbio/embedding/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding
copying skbio/embedding/_protein.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_decorator.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_plotting.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_testing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_misc.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
copying skbio/util/_warning.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity
copying skbio/diversity/_util.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity
copying skbio/diversity/_driver.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity
copying skbio/diversity/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity
copying skbio/diversity/_block.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table
copying skbio/table/_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table
copying skbio/table/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_enan.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/missing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_testing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/io.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_interval.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
copying skbio/metadata/_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_substitution.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_nucleotide_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_alphabet.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_dna.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_grammared_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/distance.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_rna.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_protein.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
copying skbio/sequence/_genetic_code.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests
copying skbio/io/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests
copying skbio/io/tests/test_registry.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests
copying skbio/io/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests
copying skbio/io/tests/test_iosources.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/phylip.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/stockholm.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/lsmat.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/blast6.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/embl.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/_sequence_feature_vocabulary.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/embed.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/_blast.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/genbank.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/gff3.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/fastq.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/taxdump.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/biom.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/emptyfile.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/clustal.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/fasta.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/binary_dm.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/newick.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/sample_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/blast7.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/ordination.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
copying skbio/io/format/qseq.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_taxdump.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_emptyfile.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_blast6.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_fasta.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_biom.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_embl.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_clustal.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_gff3.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_qseq.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_lsmat.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_blast7.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_stockholm.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_genbank.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_fastq.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_binary_dm.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_embed.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_newick.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_ordination.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_phylip.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
copying skbio/io/format/tests/test_sample_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests
copying skbio/tree/tests/test_tree.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests
copying skbio/tree/tests/test_majority_rule.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests
copying skbio/tree/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests
copying skbio/tree/tests/test_nj.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
copying skbio/alignment/tests/test_path.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
copying skbio/alignment/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
copying skbio/alignment/tests/test_tabular_msa.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
copying skbio/alignment/tests/test_ssw.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
copying skbio/alignment/tests/test_pairwise.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_lib
copying skbio/alignment/_lib/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_lib
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve
copying skbio/stats/evolve/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve
copying skbio/stats/evolve/_hommola.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_ordination_results.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_utils.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_principal_coordinate_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
copying skbio/stats/ordination/_redundancy_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_permdisp.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_anosim.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_utils.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_permanova.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_mantel.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
copying skbio/stats/distance/_bioenv.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/test_misc.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/test_subsample.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/test_power.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/test_gradient.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
copying skbio/stats/tests/test_composition.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests
copying skbio/stats/evolve/tests/test_hommola.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests
copying skbio/stats/evolve/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_ordination_results.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_anosim.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_permanova.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_mantel.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_bioenv.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
copying skbio/stats/distance/tests/test_permdisp.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests
copying skbio/embedding/tests/test_embedding.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests
copying skbio/embedding/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests
copying skbio/embedding/tests/test_protein.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
copying skbio/util/tests/test_misc.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
copying skbio/util/tests/test_testing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
copying skbio/util/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
copying skbio/util/tests/test_plotting.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
copying skbio/util/tests/test_decorator.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_chao1.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_gini.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_pd.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_lladser.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
copying skbio/diversity/alpha/_ace.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests
copying skbio/diversity/tests/test_block.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests
copying skbio/diversity/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests
copying skbio/diversity/tests/test_driver.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests
copying skbio/diversity/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta
copying skbio/diversity/beta/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta
copying skbio/diversity/beta/_unifrac.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_lladser.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_gini.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_chao1.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_ace.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
copying skbio/diversity/alpha/tests/test_pd.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests
copying skbio/diversity/beta/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests
copying skbio/diversity/beta/tests/test_unifrac.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests
copying skbio/table/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests
copying skbio/table/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_enan.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_interval.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_metadata_column.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_missing.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_io.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
copying skbio/metadata/tests/test_intersection.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_distance.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_dna.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_nucleotide_sequences.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_substitution.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_alphabet.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_genetic_code.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_grammared_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_protein.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
copying skbio/sequence/tests/test_rna.py -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/big5_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/real_file_2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/big5_file.gz -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/example_file.gz -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/example_file.bz2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/real_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/big5_file.bz2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
copying skbio/io/tests/data/example_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/gff3_bad_missing_directive -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_long_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_diff_ids.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_dna_3_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_no_data -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_constructed -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_multi_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/prot.emb -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_read -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error19 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error20 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embed2.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_del.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_variable_length_ids -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_no_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_different_padding -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error22 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_tile -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_x -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_malformed_data_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/tsv_8_fields -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_single_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_custom_multi_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_single_seq_sanger -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embed1.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/tsv_10_fields -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_custom_minimal -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_single_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error21 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_single_record_upper -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_single_seq_long -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error12 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_double_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_missing_reference_items -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_feature_level_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-comments.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error7 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_single_record_upper -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_2_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_lane -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_escape.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_y -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_missing_locus_name -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_no_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error18 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_blank_lines -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_custom_single_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error23 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multiple_trees -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_uniprot_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error8 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error6 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/prot_vec.emb -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_extensive_mixed -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_single_record_lower -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error5 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_custom_single_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_invalid_data_type -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_blank_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_default_single_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_nonstring_labels -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_example3_scores -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_extensive -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_no_data -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_missing_footer -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error3 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error13 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_invalid_column_types -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/taxdump_names.dmp -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_legacy_format -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_spaces.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/whitespace_only -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/empty -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_single_reference -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_data_only -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_max_width_1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error14 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error10 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_all_data_types -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_default_multi_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_blanks_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error17 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_10_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_duplicate_gr -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_multi_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_custom_minimal -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_gibberish -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_tab.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_null.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_blank_lines -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_single_record_lower -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multiple_references -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_example2_scores -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error16 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error24 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_default_multi_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error4 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_and_blast7_default -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_single_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_metadata_only -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/gff3_dna -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_duplicate_gc -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_custom_multi_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qseq_invalid_filter -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_single_record_simple -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_rna -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_two_chunks -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_tabs.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_multi_seq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_short_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_vtab.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_max_width_5 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/gff3_multi_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_qual_space.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/gff3_single_record -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error15 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_max_width_5 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_missing_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/legacy9_multi_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_max_width_1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_runon_references -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/blast7_default_single_line -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_single_seq_short -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/error_double_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_minimal -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_3_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/embl_multi_records -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error11 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/taxdump_nodes.dmp -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/stockholm_multiple_msa -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/ordination_error9 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
copying skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/cr_no_data_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/gr_w_msg_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/vr_real_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/gr_wo_msg_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/cr_data_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/vr_real_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/cr_no_data_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/gr_w_msg_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/cr_data_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/vr_out -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/vr_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
copying skbio/stats/tests/data/gr_wo_msg_raw -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_Y -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_skbio -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_X -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_X -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/L&L_CA_data -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_Y -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/varechem.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/varespec.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/dm_reordered.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/exp_results.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/df_extra_column.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/dm4.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/dm2.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/dm.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/frameSeries_dm.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/df.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/dm3.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/data
copying skbio/embedding/tests/data/embed1.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt
copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt
copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt
copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt
copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/empty-column-name.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/empty-file -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/invalid-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/empty-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/header-only.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/directive-before-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/non-utf-8.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
copying skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid
creating /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/non-standard-characters.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/minimal.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/empty-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/simple-with-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/comments.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/missing-data.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/partial-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/simple.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/windows-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/jagged.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/missing-insdc.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/single-column.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/override-insdc.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/mac-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/simple.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/trailing-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/numeric-column.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/column-order.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/no-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/all-cells-padded.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/unix-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/recommended-ids.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/complete-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/qiime1.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/BOM-simple.txt -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
copying skbio/metadata/tests/data/valid/single-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid
running build_ext
building 'skbio.metadata._intersection' extension
creating build/temp.linux-x86_64-cpython-312/skbio/metadata
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/metadata/_intersection.c -o build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_intersection.cpython-312-x86_64-linux-gnu.so
building 'skbio.alignment._ssw_wrapper' extension
creating build/temp.linux-x86_64-cpython-312/skbio/alignment
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/alignment/_ssw_wrapper.c:1273:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_ssw_wrapper.cpython-312-x86_64-linux-gnu.so
building 'skbio.diversity._phylogenetic' extension
creating build/temp.linux-x86_64-cpython-312/skbio/diversity
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/diversity/_phylogenetic.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_phylogenetic.cpython-312-x86_64-linux-gnu.so
building 'skbio.stats.ordination._cutils' extension
creating build/temp.linux-x86_64-cpython-312/skbio/stats/ordination
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
building 'skbio.stats.distance._cutils' extension
creating build/temp.linux-x86_64-cpython-312/skbio/stats/distance
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/distance/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/stats/distance/_cutils.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   debian/rules override_dh_auto_build-indep
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
dh_auto_build
I: pybuild base:311: /usr/bin/python3 setup.py build 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/metadata/_intersection.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/ordination/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/alignment/_ssw_wrapper.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/diversity/_phylogenetic.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/distance/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
[1/5] Cythonizing skbio/metadata/_intersection.pyx
[2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
[3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
[4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
[5/5] Cythonizing skbio/stats/distance/_cutils.pyx
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running build
running build_py
running build_ext
building 'skbio.metadata._intersection' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/metadata/_intersection.c -o build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_intersection.cpython-312-x86_64-linux-gnu.so
building 'skbio.alignment._ssw_wrapper' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/alignment/_ssw_wrapper.c:1273:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_ssw_wrapper.cpython-312-x86_64-linux-gnu.so
building 'skbio.diversity._phylogenetic' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/diversity/_phylogenetic.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_phylogenetic.cpython-312-x86_64-linux-gnu.so
building 'skbio.stats.ordination._cutils' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
building 'skbio.stats.distance._cutils' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/distance/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/stats/distance/_cutils.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
PYTHONPATH=/build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build \
	http_proxy='127.0.0.1:9' \
	python3 `which sphinx-build` -b html -d doc/build/doctrees doc/source doc/build/html
Running Sphinx v7.4.7
loading translations [en]... done
Matplotlib created a temporary cache directory at /tmp/matplotlib-r29es9a7 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
making output directory... done
[autosummary] generating autosummary for: alignment.rst, diversity.rst, embedding.rst, index.rst, io.rst, metadata.rst, sequence.rst, stats.rst, table.rst, tree.rst, util.rst, workflow.rst
[autosummary] generating autosummary for: /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignmentStructure.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.PairAlignPath.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.StripedSmithWaterman.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.TabularMSA.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.global_pairwise_align.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.global_pairwise_align_nucleotide.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.global_pairwise_align_protein.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.local_pairwise_align.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.local_pairwise_align_nucleotide.rst, ..., /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.assert_data_frame_almost_equal.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.assert_ordination_results_equal.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.cardinal_to_ordinal.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.classproperty.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.find_duplicates.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.get_data_path.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.util.safe_md5.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.Workflow.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.method.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.rst
[autosummary] generating autosummary for: /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__eq__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__ge__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__getstate__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__gt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__hash__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__le__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__lt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__ne__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.__str__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.alignment.AlignPath.from_bits.rst, ..., /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__call__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__eq__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__ge__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__getstate__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__gt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__hash__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__le__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__lt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__ne__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.workflow.requires.__str__.rst
[autosummary] generating autosummary for: /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__eq__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__ge__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__getstate__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__gt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__hash__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__le__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__lt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__ne__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.__str__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.io.registry.Format.reader.rst, ..., /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__gt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__hash__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__le__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__lt__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__ne__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.__str__.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.plot.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.read.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.rename.rst, /build/reproducible-path/python-skbio-0.6.2/doc/source/generated/skbio.stats.ordination.OrdinationResults.write.rst
loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv...
loading intersphinx inventory 'numpy' from /usr/share/doc/python-numpy/html/objects.inv...
loading intersphinx inventory 'scipy' from /usr/share/doc/python-scipy-doc/html/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/usr/share/doc/python-scipy-doc/html/objects.inv' not fetchable due to <class 'FileNotFoundError'>: [Errno 2] No such file or directory: '/usr/share/doc/python-scipy-doc/html/objects.inv'
loading intersphinx inventory 'matplotlib' from https://matplotlib.org/stable/objects.inv...
loading intersphinx inventory 'pandas' from /usr/share/doc/python-pandas-doc/html/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'https://matplotlib.org/stable/objects.inv' not fetchable due to <class 'requests.exceptions.ConnectionError'>: HTTPSConnectionPool(host='matplotlib.org', port=443): Max retries exceeded with url: /stable/objects.inv (Caused by NameResolutionError("<urllib3.connection.HTTPSConnection object at 0x7f9bb3f33620>: Failed to resolve 'matplotlib.org' ([Errno -3] Temporary failure in name resolution)"))
loading intersphinx inventory 'biom-format' from /usr/share/doc/python-biom-format-doc/html/objects.inv...
The version switcher "https://scikit.bio/versions.json" file cannot be read due to the following error:
ConnectionError(MaxRetryError('HTTPSConnectionPool(host=\'scikit.bio\', port=443): Max retries exceeded with url: /versions.json (Caused by NameResolutionError("<urllib3.connection.HTTPSConnection object at 0x7f9bb1093e00>: Failed to resolve \'scikit.bio\' ([Errno -3] Temporary failure in name resolution)"))'))
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 12 source files that are out of date
updating environment: [new config] 1112 added, 0 changed, 0 removed
reading sources... [  0%] alignment
reading sources... [  0%] diversity
/build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.011492611219229327 and the largest is 16.021722090908206.
  warn(
reading sources... [  0%] embedding
reading sources... [  0%] generated/skbio.alignment.AlignPath
reading sources... [  0%] generated/skbio.alignment.AlignPath.__eq__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__ge__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__getstate__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__gt__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__hash__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__le__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__lt__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__ne__
reading sources... [  1%] generated/skbio.alignment.AlignPath.__str__
reading sources... [  1%] generated/skbio.alignment.AlignPath.from_bits
reading sources... [  1%] generated/skbio.alignment.AlignPath.from_coordinates
reading sources... [  1%] generated/skbio.alignment.AlignPath.from_indices
reading sources... [  2%] generated/skbio.alignment.AlignPath.from_tabular
reading sources... [  2%] generated/skbio.alignment.AlignPath.to_bits
reading sources... [  2%] generated/skbio.alignment.AlignPath.to_coordinates
reading sources... [  2%] generated/skbio.alignment.AlignPath.to_indices
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__eq__
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__ge__
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__getitem__
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__getstate__
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__gt__
reading sources... [  2%] generated/skbio.alignment.AlignmentStructure.__hash__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.__le__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.__lt__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.__ne__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.__setstate__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.__str__
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.is_zero_based
reading sources... [  3%] generated/skbio.alignment.AlignmentStructure.set_zero_based
reading sources... [  3%] generated/skbio.alignment.PairAlignPath
reading sources... [  3%] generated/skbio.alignment.PairAlignPath.__eq__
reading sources... [  3%] generated/skbio.alignment.PairAlignPath.__ge__
reading sources... [  3%] generated/skbio.alignment.PairAlignPath.__getstate__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__gt__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__hash__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__le__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__lt__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__ne__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.__str__
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.from_bits
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.from_cigar
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.from_coordinates
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.from_indices
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.from_tabular
reading sources... [  4%] generated/skbio.alignment.PairAlignPath.to_bits
reading sources... [  5%] generated/skbio.alignment.PairAlignPath.to_cigar
reading sources... [  5%] generated/skbio.alignment.PairAlignPath.to_coordinates
reading sources... [  5%] generated/skbio.alignment.PairAlignPath.to_indices
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__call__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__eq__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__ge__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__getstate__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__gt__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__hash__
reading sources... [  5%] generated/skbio.alignment.StripedSmithWaterman.__le__
reading sources... [  6%] generated/skbio.alignment.StripedSmithWaterman.__lt__
reading sources... [  6%] generated/skbio.alignment.StripedSmithWaterman.__ne__
reading sources... [  6%] generated/skbio.alignment.StripedSmithWaterman.__setstate__
reading sources... [  6%] generated/skbio.alignment.StripedSmithWaterman.__str__
reading sources... [  6%] generated/skbio.alignment.TabularMSA
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__bool__
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__contains__
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__copy__
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__deepcopy__
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__eq__
reading sources... [  6%] generated/skbio.alignment.TabularMSA.__ge__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__getitem__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__getstate__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__gt__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__iter__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__le__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__len__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__lt__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__ne__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__reversed__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.__str__
reading sources... [  7%] generated/skbio.alignment.TabularMSA.append
reading sources... [  8%] generated/skbio.alignment.TabularMSA.consensus
reading sources... [  8%] generated/skbio.alignment.TabularMSA.conservation
reading sources... [  8%] generated/skbio.alignment.TabularMSA.extend
reading sources... [  8%] generated/skbio.alignment.TabularMSA.from_dict
reading sources... [  8%] generated/skbio.alignment.TabularMSA.from_path_seqs
reading sources... [  8%] generated/skbio.alignment.TabularMSA.gap_frequencies
reading sources... [  8%] generated/skbio.alignment.TabularMSA.has_metadata
reading sources... [  8%] generated/skbio.alignment.TabularMSA.has_positional_metadata
reading sources... [  8%] generated/skbio.alignment.TabularMSA.iter_positions
reading sources... [  8%] generated/skbio.alignment.TabularMSA.join
reading sources... [  8%] generated/skbio.alignment.TabularMSA.read
reading sources... [  9%] generated/skbio.alignment.TabularMSA.reassign_index
reading sources... [  9%] generated/skbio.alignment.TabularMSA.sort
reading sources... [  9%] generated/skbio.alignment.TabularMSA.to_dict
reading sources... [  9%] generated/skbio.alignment.TabularMSA.write
reading sources... [  9%] generated/skbio.alignment.global_pairwise_align
reading sources... [  9%] generated/skbio.alignment.global_pairwise_align_nucleotide
reading sources... [  9%] generated/skbio.alignment.global_pairwise_align_protein
reading sources... [  9%] generated/skbio.alignment.local_pairwise_align
reading sources... [  9%] generated/skbio.alignment.local_pairwise_align_nucleotide
reading sources... [  9%] generated/skbio.alignment.local_pairwise_align_protein
reading sources... [  9%] generated/skbio.alignment.local_pairwise_align_ssw
reading sources... [ 10%] generated/skbio.alignment.make_identity_substitution_matrix
reading sources... [ 10%] generated/skbio.diversity.alpha
reading sources... [ 10%] generated/skbio.diversity.alpha.ace
reading sources... [ 10%] generated/skbio.diversity.alpha.berger_parker_d
reading sources... [ 10%] generated/skbio.diversity.alpha.brillouin_d
reading sources... [ 10%] generated/skbio.diversity.alpha.chao1
reading sources... [ 10%] generated/skbio.diversity.alpha.chao1_ci
reading sources... [ 10%] generated/skbio.diversity.alpha.dominance
reading sources... [ 10%] generated/skbio.diversity.alpha.doubles
reading sources... [ 10%] generated/skbio.diversity.alpha.enspie
reading sources... [ 10%] generated/skbio.diversity.alpha.esty_ci
reading sources... [ 11%] generated/skbio.diversity.alpha.faith_pd
reading sources... [ 11%] generated/skbio.diversity.alpha.fisher_alpha
reading sources... [ 11%] generated/skbio.diversity.alpha.gini_index
reading sources... [ 11%] generated/skbio.diversity.alpha.goods_coverage
reading sources... [ 11%] generated/skbio.diversity.alpha.heip_e
reading sources... [ 11%] generated/skbio.diversity.alpha.hill
reading sources... [ 11%] generated/skbio.diversity.alpha.inv_simpson
reading sources... [ 11%] generated/skbio.diversity.alpha.kempton_taylor_q
reading sources... [ 11%] generated/skbio.diversity.alpha.lladser_ci
reading sources... [ 11%] generated/skbio.diversity.alpha.lladser_pe
reading sources... [ 11%] generated/skbio.diversity.alpha.margalef
reading sources... [ 12%] generated/skbio.diversity.alpha.mcintosh_d
reading sources... [ 12%] generated/skbio.diversity.alpha.mcintosh_e
reading sources... [ 12%] generated/skbio.diversity.alpha.menhinick
reading sources... [ 12%] generated/skbio.diversity.alpha.michaelis_menten_fit
reading sources... [ 12%] generated/skbio.diversity.alpha.observed_features
reading sources... [ 12%] generated/skbio.diversity.alpha.observed_otus
reading sources... [ 12%] generated/skbio.diversity.alpha.osd
reading sources... [ 12%] generated/skbio.diversity.alpha.phydiv
reading sources... [ 12%] generated/skbio.diversity.alpha.pielou_e
reading sources... [ 12%] generated/skbio.diversity.alpha.renyi
reading sources... [ 12%] generated/skbio.diversity.alpha.robbins
reading sources... [ 12%] generated/skbio.diversity.alpha.shannon
reading sources... [ 13%] generated/skbio.diversity.alpha.simpson
reading sources... [ 13%] generated/skbio.diversity.alpha.simpson_d
reading sources... [ 13%] generated/skbio.diversity.alpha.simpson_e
reading sources... [ 13%] generated/skbio.diversity.alpha.singles
reading sources... [ 13%] generated/skbio.diversity.alpha.sobs
reading sources... [ 13%] generated/skbio.diversity.alpha.strong
reading sources... [ 13%] generated/skbio.diversity.alpha.tsallis
reading sources... [ 13%] generated/skbio.diversity.alpha_diversity
reading sources... [ 13%] generated/skbio.diversity.beta
reading sources... [ 13%] generated/skbio.diversity.beta.unweighted_unifrac
reading sources... [ 13%] generated/skbio.diversity.beta.weighted_unifrac
reading sources... [ 14%] generated/skbio.diversity.beta_diversity
reading sources... [ 14%] generated/skbio.diversity.block_beta_diversity
reading sources... [ 14%] generated/skbio.diversity.get_alpha_diversity_metrics
reading sources... [ 14%] generated/skbio.diversity.get_beta_diversity_metrics
reading sources... [ 14%] generated/skbio.diversity.partial_beta_diversity
reading sources... [ 14%] generated/skbio.embedding.Embedding
reading sources... [ 14%] generated/skbio.embedding.Embedding.__eq__
reading sources... [ 14%] generated/skbio.embedding.Embedding.__ge__
reading sources... [ 14%] generated/skbio.embedding.Embedding.__getstate__
reading sources... [ 14%] generated/skbio.embedding.Embedding.__gt__
reading sources... [ 14%] generated/skbio.embedding.Embedding.__hash__
reading sources... [ 15%] generated/skbio.embedding.Embedding.__le__
reading sources... [ 15%] generated/skbio.embedding.Embedding.__lt__
reading sources... [ 15%] generated/skbio.embedding.Embedding.__ne__
reading sources... [ 15%] generated/skbio.embedding.Embedding.__str__
reading sources... [ 15%] generated/skbio.embedding.Embedding.bytes
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding.__eq__
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding.__ge__
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding.__getstate__
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding.__gt__
reading sources... [ 15%] generated/skbio.embedding.ProteinEmbedding.__hash__
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.__le__
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.__lt__
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.__ne__
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.__str__
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.bytes
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.read
reading sources... [ 16%] generated/skbio.embedding.ProteinEmbedding.write
reading sources... [ 16%] generated/skbio.embedding.ProteinVector
reading sources... [ 16%] generated/skbio.embedding.ProteinVector.__eq__
reading sources... [ 16%] generated/skbio.embedding.ProteinVector.__ge__
reading sources... [ 16%] generated/skbio.embedding.ProteinVector.__getstate__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__gt__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__hash__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__le__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__lt__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__ne__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.__str__
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.bytes
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.read
reading sources... [ 17%] generated/skbio.embedding.ProteinVector.write
reading sources... [ 17%] generated/skbio.embedding.SequenceEmbedding
reading sources... [ 17%] generated/skbio.embedding.SequenceEmbedding.__eq__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__ge__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__getstate__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__gt__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__hash__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__le__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__lt__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__ne__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.__str__
reading sources... [ 18%] generated/skbio.embedding.SequenceEmbedding.bytes
reading sources... [ 18%] generated/skbio.embedding.SequenceVector
reading sources... [ 18%] generated/skbio.embedding.SequenceVector.__eq__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__ge__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__getstate__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__gt__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__hash__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__le__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__lt__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__ne__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.__str__
reading sources... [ 19%] generated/skbio.embedding.SequenceVector.bytes
reading sources... [ 19%] generated/skbio.embedding.embed_vec_to_dataframe
reading sources... [ 19%] generated/skbio.embedding.embed_vec_to_distances
reading sources... [ 20%] generated/skbio.embedding.embed_vec_to_numpy
reading sources... [ 20%] generated/skbio.embedding.embed_vec_to_ordination
reading sources... [ 20%] generated/skbio.io.format.binary_dm
reading sources... [ 20%] generated/skbio.io.format.biom
reading sources... [ 20%] generated/skbio.io.format.blast6
reading sources... [ 20%] generated/skbio.io.format.blast7
reading sources... [ 20%] generated/skbio.io.format.clustal
reading sources... [ 20%] generated/skbio.io.format.embed
reading sources... [ 20%] generated/skbio.io.format.embl
reading sources... [ 20%] generated/skbio.io.format.fasta
reading sources... [ 20%] generated/skbio.io.format.fastq
reading sources... [ 21%] generated/skbio.io.format.genbank
reading sources... [ 21%] generated/skbio.io.format.gff3
reading sources... [ 21%] generated/skbio.io.format.lsmat
reading sources... [ 21%] generated/skbio.io.format.newick
reading sources... [ 21%] generated/skbio.io.format.ordination
reading sources... [ 21%] generated/skbio.io.format.phylip
reading sources... [ 21%] generated/skbio.io.format.qseq
reading sources... [ 21%] generated/skbio.io.format.sample_metadata
reading sources... [ 21%] generated/skbio.io.format.stockholm
reading sources... [ 21%] generated/skbio.io.format.taxdump
reading sources... [ 21%] generated/skbio.io.registry
reading sources... [ 21%] generated/skbio.io.registry.Format
reading sources... [ 22%] generated/skbio.io.registry.Format.__eq__
reading sources... [ 22%] generated/skbio.io.registry.Format.__ge__
reading sources... [ 22%] generated/skbio.io.registry.Format.__getstate__
reading sources... [ 22%] generated/skbio.io.registry.Format.__gt__
reading sources... [ 22%] generated/skbio.io.registry.Format.__hash__
reading sources... [ 22%] generated/skbio.io.registry.Format.__le__
reading sources... [ 22%] generated/skbio.io.registry.Format.__lt__
reading sources... [ 22%] generated/skbio.io.registry.Format.__ne__
reading sources... [ 22%] generated/skbio.io.registry.Format.__str__
reading sources... [ 22%] generated/skbio.io.registry.Format.reader
reading sources... [ 22%] generated/skbio.io.registry.Format.sniffer
reading sources... [ 23%] generated/skbio.io.registry.Format.writer
reading sources... [ 23%] generated/skbio.io.registry.IORegistry
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__eq__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__ge__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__getstate__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__gt__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__hash__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__le__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__lt__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__ne__
reading sources... [ 23%] generated/skbio.io.registry.IORegistry.__str__
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.add_format
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.create_format
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.get_reader
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.get_sniffer
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.get_writer
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.list_read_formats
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.list_write_formats
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.monkey_patch
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.read
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.sniff
reading sources... [ 24%] generated/skbio.io.registry.IORegistry.write
reading sources... [ 25%] generated/skbio.io.registry.create_format
reading sources... [ 25%] generated/skbio.io.registry.read
reading sources... [ 25%] generated/skbio.io.registry.sniff
reading sources... [ 25%] generated/skbio.io.registry.write
reading sources... [ 25%] generated/skbio.io.util
reading sources... [ 25%] generated/skbio.io.util.open
reading sources... [ 25%] generated/skbio.io.util.open_file
reading sources... [ 25%] generated/skbio.io.util.open_files
reading sources... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn
reading sources... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn.__eq__
reading sources... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn.__ge__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__getstate__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__gt__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__le__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__lt__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__ne__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__str__
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.drop_missing_values
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.filter_ids
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_ids
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_missing
reading sources... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_value
reading sources... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.has_missing_values
reading sources... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.save
reading sources... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.to_dataframe
reading sources... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.to_series
reading sources... [ 27%] generated/skbio.metadata.Interval
reading sources... [ 27%] generated/skbio.metadata.Interval.__eq__
reading sources... [ 27%] generated/skbio.metadata.Interval.__ge__
reading sources... [ 27%] generated/skbio.metadata.Interval.__getstate__
reading sources... [ 27%] generated/skbio.metadata.Interval.__gt__
reading sources... [ 27%] generated/skbio.metadata.Interval.__le__
reading sources... [ 27%] generated/skbio.metadata.Interval.__lt__
reading sources... [ 28%] generated/skbio.metadata.Interval.__ne__
reading sources... [ 28%] generated/skbio.metadata.Interval.__str__
reading sources... [ 28%] generated/skbio.metadata.Interval.drop
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__copy__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__deepcopy__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__eq__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__ge__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__getstate__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__gt__
reading sources... [ 28%] generated/skbio.metadata.IntervalMetadata.__le__
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.__lt__
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.__ne__
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.__str__
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.add
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.concat
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.drop
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.merge
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.query
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.read
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.sort
reading sources... [ 29%] generated/skbio.metadata.IntervalMetadata.write
reading sources... [ 29%] generated/skbio.metadata.MetadataColumn
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__eq__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__ge__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__getstate__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__gt__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__le__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__lt__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__ne__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.__str__
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.drop_missing_values
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.filter_ids
reading sources... [ 30%] generated/skbio.metadata.MetadataColumn.get_ids
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.get_missing
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.get_value
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.has_missing_values
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.save
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.to_dataframe
reading sources... [ 31%] generated/skbio.metadata.MetadataColumn.to_series
reading sources... [ 31%] generated/skbio.metadata.NumericMetadataColumn
reading sources... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__eq__
reading sources... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__ge__
reading sources... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__getstate__
reading sources... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__gt__
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__le__
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__lt__
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__ne__
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__str__
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.drop_missing_values
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.filter_ids
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_ids
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_missing
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_value
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.has_missing_values
reading sources... [ 32%] generated/skbio.metadata.NumericMetadataColumn.save
reading sources... [ 33%] generated/skbio.metadata.NumericMetadataColumn.to_dataframe
reading sources... [ 33%] generated/skbio.metadata.NumericMetadataColumn.to_series
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__eq__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__ge__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__getstate__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__gt__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__le__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__lt__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__ne__
reading sources... [ 33%] generated/skbio.metadata.SampleMetadata.__str__
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.filter_columns
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.filter_ids
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.get_column
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.get_ids
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.load
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.merge
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.read
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.save
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.to_dataframe
reading sources... [ 34%] generated/skbio.metadata.SampleMetadata.write
reading sources... [ 34%] generated/skbio.sequence.DNA
reading sources... [ 35%] generated/skbio.sequence.DNA.__bool__
reading sources... [ 35%] generated/skbio.sequence.DNA.__contains__
reading sources... [ 35%] generated/skbio.sequence.DNA.__copy__
reading sources... [ 35%] generated/skbio.sequence.DNA.__deepcopy__
reading sources... [ 35%] generated/skbio.sequence.DNA.__eq__
reading sources... [ 35%] generated/skbio.sequence.DNA.__ge__
reading sources... [ 35%] generated/skbio.sequence.DNA.__getitem__
reading sources... [ 35%] generated/skbio.sequence.DNA.__getstate__
reading sources... [ 35%] generated/skbio.sequence.DNA.__gt__
reading sources... [ 35%] generated/skbio.sequence.DNA.__iter__
reading sources... [ 35%] generated/skbio.sequence.DNA.__le__
reading sources... [ 36%] generated/skbio.sequence.DNA.__len__
reading sources... [ 36%] generated/skbio.sequence.DNA.__lt__
reading sources... [ 36%] generated/skbio.sequence.DNA.__ne__
reading sources... [ 36%] generated/skbio.sequence.DNA.__reversed__
reading sources... [ 36%] generated/skbio.sequence.DNA.__str__
reading sources... [ 36%] generated/skbio.sequence.DNA.complement
reading sources... [ 36%] generated/skbio.sequence.DNA.concat
reading sources... [ 36%] generated/skbio.sequence.DNA.count
reading sources... [ 36%] generated/skbio.sequence.DNA.definites
reading sources... [ 36%] generated/skbio.sequence.DNA.degap
reading sources... [ 36%] generated/skbio.sequence.DNA.degenerates
reading sources... [ 37%] generated/skbio.sequence.DNA.distance
reading sources... [ 37%] generated/skbio.sequence.DNA.expand_degenerates
reading sources... [ 37%] generated/skbio.sequence.DNA.find_motifs
reading sources... [ 37%] generated/skbio.sequence.DNA.find_with_regex
reading sources... [ 37%] generated/skbio.sequence.DNA.frequencies
reading sources... [ 37%] generated/skbio.sequence.DNA.gaps
reading sources... [ 37%] generated/skbio.sequence.DNA.gc_content
reading sources... [ 37%] generated/skbio.sequence.DNA.gc_frequency
reading sources... [ 37%] generated/skbio.sequence.DNA.has_definites
reading sources... [ 37%] generated/skbio.sequence.DNA.has_degenerates
reading sources... [ 37%] generated/skbio.sequence.DNA.has_gaps
reading sources... [ 38%] generated/skbio.sequence.DNA.has_interval_metadata
reading sources... [ 38%] generated/skbio.sequence.DNA.has_metadata
reading sources... [ 38%] generated/skbio.sequence.DNA.has_nondegenerates
reading sources... [ 38%] generated/skbio.sequence.DNA.has_positional_metadata
reading sources... [ 38%] generated/skbio.sequence.DNA.index
reading sources... [ 38%] generated/skbio.sequence.DNA.is_reverse_complement
reading sources... [ 38%] generated/skbio.sequence.DNA.iter_contiguous
reading sources... [ 38%] generated/skbio.sequence.DNA.iter_kmers
reading sources... [ 38%] generated/skbio.sequence.DNA.kmer_frequencies
reading sources... [ 38%] generated/skbio.sequence.DNA.lowercase
reading sources... [ 38%] generated/skbio.sequence.DNA.match_frequency
reading sources... [ 38%] generated/skbio.sequence.DNA.matches
reading sources... [ 39%] generated/skbio.sequence.DNA.mismatch_frequency
reading sources... [ 39%] generated/skbio.sequence.DNA.mismatches
reading sources... [ 39%] generated/skbio.sequence.DNA.nondegenerates
reading sources... [ 39%] generated/skbio.sequence.DNA.read
reading sources... [ 39%] generated/skbio.sequence.DNA.replace
reading sources... [ 39%] generated/skbio.sequence.DNA.reverse_complement
reading sources... [ 39%] generated/skbio.sequence.DNA.to_definites
reading sources... [ 39%] generated/skbio.sequence.DNA.to_indices
reading sources... [ 39%] generated/skbio.sequence.DNA.to_regex
reading sources... [ 39%] generated/skbio.sequence.DNA.transcribe
reading sources... [ 39%] generated/skbio.sequence.DNA.translate
reading sources... [ 40%] generated/skbio.sequence.DNA.translate_six_frames
reading sources... [ 40%] generated/skbio.sequence.DNA.write
reading sources... [ 40%] generated/skbio.sequence.GeneticCode
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__eq__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__ge__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__getstate__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__gt__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__le__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__lt__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__ne__
reading sources... [ 40%] generated/skbio.sequence.GeneticCode.__str__
reading sources... [ 41%] generated/skbio.sequence.GeneticCode.from_ncbi
reading sources... [ 41%] generated/skbio.sequence.GeneticCode.translate
reading sources... [ 41%] generated/skbio.sequence.GeneticCode.translate_six_frames
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__bool__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__contains__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__copy__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__deepcopy__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__eq__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__ge__
reading sources... [ 41%] generated/skbio.sequence.GrammaredSequence.__getitem__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__getstate__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__gt__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__iter__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__le__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__len__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__lt__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__ne__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__reversed__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.__str__
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.concat
reading sources... [ 42%] generated/skbio.sequence.GrammaredSequence.count
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.definites
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.degap
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.degenerates
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.distance
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.expand_degenerates
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.find_motifs
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.find_with_regex
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.frequencies
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.gaps
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.has_definites
reading sources... [ 43%] generated/skbio.sequence.GrammaredSequence.has_degenerates
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.has_gaps
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.has_interval_metadata
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.has_metadata
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.has_nondegenerates
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.has_positional_metadata
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.index
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.iter_contiguous
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.iter_kmers
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.kmer_frequencies
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.lowercase
reading sources... [ 44%] generated/skbio.sequence.GrammaredSequence.match_frequency
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.matches
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.mismatch_frequency
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.mismatches
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.nondegenerates
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.read
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.replace
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.to_definites
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.to_indices
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.to_regex
reading sources... [ 45%] generated/skbio.sequence.GrammaredSequence.write
reading sources... [ 45%] generated/skbio.sequence.Protein
reading sources... [ 46%] generated/skbio.sequence.Protein.__bool__
reading sources... [ 46%] generated/skbio.sequence.Protein.__contains__
reading sources... [ 46%] generated/skbio.sequence.Protein.__copy__
reading sources... [ 46%] generated/skbio.sequence.Protein.__deepcopy__
reading sources... [ 46%] generated/skbio.sequence.Protein.__eq__
reading sources... [ 46%] generated/skbio.sequence.Protein.__ge__
reading sources... [ 46%] generated/skbio.sequence.Protein.__getitem__
reading sources... [ 46%] generated/skbio.sequence.Protein.__getstate__
reading sources... [ 46%] generated/skbio.sequence.Protein.__gt__
reading sources... [ 46%] generated/skbio.sequence.Protein.__iter__
reading sources... [ 46%] generated/skbio.sequence.Protein.__le__
reading sources... [ 46%] generated/skbio.sequence.Protein.__len__
reading sources... [ 47%] generated/skbio.sequence.Protein.__lt__
reading sources... [ 47%] generated/skbio.sequence.Protein.__ne__
reading sources... [ 47%] generated/skbio.sequence.Protein.__reversed__
reading sources... [ 47%] generated/skbio.sequence.Protein.__str__
reading sources... [ 47%] generated/skbio.sequence.Protein.concat
reading sources... [ 47%] generated/skbio.sequence.Protein.count
reading sources... [ 47%] generated/skbio.sequence.Protein.definites
reading sources... [ 47%] generated/skbio.sequence.Protein.degap
reading sources... [ 47%] generated/skbio.sequence.Protein.degenerates
reading sources... [ 47%] generated/skbio.sequence.Protein.distance
reading sources... [ 47%] generated/skbio.sequence.Protein.expand_degenerates
reading sources... [ 48%] generated/skbio.sequence.Protein.find_motifs
reading sources... [ 48%] generated/skbio.sequence.Protein.find_with_regex
reading sources... [ 48%] generated/skbio.sequence.Protein.frequencies
reading sources... [ 48%] generated/skbio.sequence.Protein.gaps
reading sources... [ 48%] generated/skbio.sequence.Protein.has_definites
reading sources... [ 48%] generated/skbio.sequence.Protein.has_degenerates
reading sources... [ 48%] generated/skbio.sequence.Protein.has_gaps
reading sources... [ 48%] generated/skbio.sequence.Protein.has_interval_metadata
reading sources... [ 48%] generated/skbio.sequence.Protein.has_metadata
reading sources... [ 48%] generated/skbio.sequence.Protein.has_nondegenerates
reading sources... [ 48%] generated/skbio.sequence.Protein.has_positional_metadata
reading sources... [ 49%] generated/skbio.sequence.Protein.has_stops
reading sources... [ 49%] generated/skbio.sequence.Protein.index
reading sources... [ 49%] generated/skbio.sequence.Protein.iter_contiguous
reading sources... [ 49%] generated/skbio.sequence.Protein.iter_kmers
reading sources... [ 49%] generated/skbio.sequence.Protein.kmer_frequencies
reading sources... [ 49%] generated/skbio.sequence.Protein.lowercase
reading sources... [ 49%] generated/skbio.sequence.Protein.match_frequency
reading sources... [ 49%] generated/skbio.sequence.Protein.matches
reading sources... [ 49%] generated/skbio.sequence.Protein.mismatch_frequency
reading sources... [ 49%] generated/skbio.sequence.Protein.mismatches
reading sources... [ 49%] generated/skbio.sequence.Protein.nondegenerates
reading sources... [ 50%] generated/skbio.sequence.Protein.read
reading sources... [ 50%] generated/skbio.sequence.Protein.replace
reading sources... [ 50%] generated/skbio.sequence.Protein.stops
reading sources... [ 50%] generated/skbio.sequence.Protein.to_definites
reading sources... [ 50%] generated/skbio.sequence.Protein.to_indices
reading sources... [ 50%] generated/skbio.sequence.Protein.to_regex
reading sources... [ 50%] generated/skbio.sequence.Protein.write
reading sources... [ 50%] generated/skbio.sequence.RNA
reading sources... [ 50%] generated/skbio.sequence.RNA.__bool__
reading sources... [ 50%] generated/skbio.sequence.RNA.__contains__
reading sources... [ 50%] generated/skbio.sequence.RNA.__copy__
reading sources... [ 51%] generated/skbio.sequence.RNA.__deepcopy__
reading sources... [ 51%] generated/skbio.sequence.RNA.__eq__
reading sources... [ 51%] generated/skbio.sequence.RNA.__ge__
reading sources... [ 51%] generated/skbio.sequence.RNA.__getitem__
reading sources... [ 51%] generated/skbio.sequence.RNA.__getstate__
reading sources... [ 51%] generated/skbio.sequence.RNA.__gt__
reading sources... [ 51%] generated/skbio.sequence.RNA.__iter__
reading sources... [ 51%] generated/skbio.sequence.RNA.__le__
reading sources... [ 51%] generated/skbio.sequence.RNA.__len__
reading sources... [ 51%] generated/skbio.sequence.RNA.__lt__
reading sources... [ 51%] generated/skbio.sequence.RNA.__ne__
reading sources... [ 52%] generated/skbio.sequence.RNA.__reversed__
reading sources... [ 52%] generated/skbio.sequence.RNA.__str__
reading sources... [ 52%] generated/skbio.sequence.RNA.complement
reading sources... [ 52%] generated/skbio.sequence.RNA.concat
reading sources... [ 52%] generated/skbio.sequence.RNA.count
reading sources... [ 52%] generated/skbio.sequence.RNA.definites
reading sources... [ 52%] generated/skbio.sequence.RNA.degap
reading sources... [ 52%] generated/skbio.sequence.RNA.degenerates
reading sources... [ 52%] generated/skbio.sequence.RNA.distance
reading sources... [ 52%] generated/skbio.sequence.RNA.expand_degenerates
reading sources... [ 52%] generated/skbio.sequence.RNA.find_motifs
reading sources... [ 53%] generated/skbio.sequence.RNA.find_with_regex
reading sources... [ 53%] generated/skbio.sequence.RNA.frequencies
reading sources... [ 53%] generated/skbio.sequence.RNA.gaps
reading sources... [ 53%] generated/skbio.sequence.RNA.gc_content
reading sources... [ 53%] generated/skbio.sequence.RNA.gc_frequency
reading sources... [ 53%] generated/skbio.sequence.RNA.has_definites
reading sources... [ 53%] generated/skbio.sequence.RNA.has_degenerates
reading sources... [ 53%] generated/skbio.sequence.RNA.has_gaps
reading sources... [ 53%] generated/skbio.sequence.RNA.has_interval_metadata
reading sources... [ 53%] generated/skbio.sequence.RNA.has_metadata
reading sources... [ 53%] generated/skbio.sequence.RNA.has_nondegenerates
reading sources... [ 54%] generated/skbio.sequence.RNA.has_positional_metadata
reading sources... [ 54%] generated/skbio.sequence.RNA.index
reading sources... [ 54%] generated/skbio.sequence.RNA.is_reverse_complement
reading sources... [ 54%] generated/skbio.sequence.RNA.iter_contiguous
reading sources... [ 54%] generated/skbio.sequence.RNA.iter_kmers
reading sources... [ 54%] generated/skbio.sequence.RNA.kmer_frequencies
reading sources... [ 54%] generated/skbio.sequence.RNA.lowercase
reading sources... [ 54%] generated/skbio.sequence.RNA.match_frequency
reading sources... [ 54%] generated/skbio.sequence.RNA.matches
reading sources... [ 54%] generated/skbio.sequence.RNA.mismatch_frequency
reading sources... [ 54%] generated/skbio.sequence.RNA.mismatches
reading sources... [ 54%] generated/skbio.sequence.RNA.nondegenerates
reading sources... [ 55%] generated/skbio.sequence.RNA.read
reading sources... [ 55%] generated/skbio.sequence.RNA.replace
reading sources... [ 55%] generated/skbio.sequence.RNA.reverse_complement
reading sources... [ 55%] generated/skbio.sequence.RNA.reverse_transcribe
reading sources... [ 55%] generated/skbio.sequence.RNA.to_definites
reading sources... [ 55%] generated/skbio.sequence.RNA.to_indices
reading sources... [ 55%] generated/skbio.sequence.RNA.to_regex
reading sources... [ 55%] generated/skbio.sequence.RNA.translate
reading sources... [ 55%] generated/skbio.sequence.RNA.translate_six_frames
reading sources... [ 55%] generated/skbio.sequence.RNA.write
reading sources... [ 55%] generated/skbio.sequence.Sequence
reading sources... [ 56%] generated/skbio.sequence.Sequence.__bool__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__contains__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__copy__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__deepcopy__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__eq__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__ge__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__getitem__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__getstate__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__gt__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__iter__
reading sources... [ 56%] generated/skbio.sequence.Sequence.__le__
reading sources... [ 57%] generated/skbio.sequence.Sequence.__len__
reading sources... [ 57%] generated/skbio.sequence.Sequence.__lt__
reading sources... [ 57%] generated/skbio.sequence.Sequence.__ne__
reading sources... [ 57%] generated/skbio.sequence.Sequence.__reversed__
reading sources... [ 57%] generated/skbio.sequence.Sequence.__str__
reading sources... [ 57%] generated/skbio.sequence.Sequence.concat
reading sources... [ 57%] generated/skbio.sequence.Sequence.count
reading sources... [ 57%] generated/skbio.sequence.Sequence.distance
reading sources... [ 57%] generated/skbio.sequence.Sequence.find_with_regex
reading sources... [ 57%] generated/skbio.sequence.Sequence.frequencies
reading sources... [ 57%] generated/skbio.sequence.Sequence.has_interval_metadata
reading sources... [ 58%] generated/skbio.sequence.Sequence.has_metadata
reading sources... [ 58%] generated/skbio.sequence.Sequence.has_positional_metadata
reading sources... [ 58%] generated/skbio.sequence.Sequence.index
reading sources... [ 58%] generated/skbio.sequence.Sequence.iter_contiguous
reading sources... [ 58%] generated/skbio.sequence.Sequence.iter_kmers
reading sources... [ 58%] generated/skbio.sequence.Sequence.kmer_frequencies
reading sources... [ 58%] generated/skbio.sequence.Sequence.lowercase
reading sources... [ 58%] generated/skbio.sequence.Sequence.match_frequency
reading sources... [ 58%] generated/skbio.sequence.Sequence.matches
reading sources... [ 58%] generated/skbio.sequence.Sequence.mismatch_frequency
reading sources... [ 58%] generated/skbio.sequence.Sequence.mismatches
reading sources... [ 59%] generated/skbio.sequence.Sequence.read
reading sources... [ 59%] generated/skbio.sequence.Sequence.replace
reading sources... [ 59%] generated/skbio.sequence.Sequence.to_indices
reading sources... [ 59%] generated/skbio.sequence.Sequence.write
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__contains__
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__eq__
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__ge__
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__getitem__
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__getstate__
reading sources... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__gt__
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__le__
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__lt__
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__ne__
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__str__
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.between
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.by_name
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.copy
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.filter
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.from_dict
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.from_iterable
reading sources... [ 60%] generated/skbio.sequence.SubstitutionMatrix.get_names
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.identity
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.index
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.plot
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.read
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.redundant_form
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.rename
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.to_data_frame
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.to_dict
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.transpose
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.within
reading sources... [ 61%] generated/skbio.sequence.SubstitutionMatrix.write
reading sources... [ 62%] generated/skbio.sequence.distance
reading sources... [ 62%] generated/skbio.sequence.distance.hamming
reading sources... [ 62%] generated/skbio.sequence.distance.kmer_distance
reading sources... [ 62%] generated/skbio.stats.composition
reading sources... [ 62%] generated/skbio.stats.composition.alr
reading sources... [ 62%] generated/skbio.stats.composition.alr_inv
reading sources... [ 62%] generated/skbio.stats.composition.ancom
reading sources... [ 62%] generated/skbio.stats.composition.centralize
reading sources... [ 62%] generated/skbio.stats.composition.closure
reading sources... [ 62%] generated/skbio.stats.composition.clr
reading sources... [ 62%] generated/skbio.stats.composition.clr_inv
reading sources... [ 62%] generated/skbio.stats.composition.dirmult_ttest
reading sources... [ 63%] generated/skbio.stats.composition.ilr
reading sources... [ 63%] generated/skbio.stats.composition.ilr_inv
reading sources... [ 63%] generated/skbio.stats.composition.inner
reading sources... [ 63%] generated/skbio.stats.composition.multi_replace
reading sources... [ 63%] generated/skbio.stats.composition.multiplicative_replacement
reading sources... [ 63%] generated/skbio.stats.composition.pairwise_vlr
reading sources... [ 63%] generated/skbio.stats.composition.perturb
reading sources... [ 63%] generated/skbio.stats.composition.perturb_inv
reading sources... [ 63%] generated/skbio.stats.composition.power
reading sources... [ 63%] generated/skbio.stats.composition.sbp_basis
reading sources... [ 63%] generated/skbio.stats.composition.tree_basis
reading sources... [ 64%] generated/skbio.stats.composition.vlr
reading sources... [ 64%] generated/skbio.stats.distance
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__contains__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__eq__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__ge__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__getitem__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__getstate__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__gt__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__le__
reading sources... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__lt__
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.__ne__
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.__str__
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.between
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.copy
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.filter
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.from_iterable
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.index
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.plot
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.read
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.redundant_form
reading sources... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.rename
reading sources... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.to_data_frame
reading sources... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.transpose
reading sources... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.within
reading sources... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.write
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__contains__
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__eq__
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__ge__
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__getitem__
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__getstate__
reading sources... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__gt__
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__le__
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__lt__
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__ne__
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__str__
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.between
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.condensed_form
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.copy
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.filter
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.from_iterable
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.index
reading sources... [ 67%] generated/skbio.stats.distance.DistanceMatrix.permute
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.plot
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.read
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.redundant_form
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.rename
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.to_data_frame
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.to_series
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.transpose
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.within
reading sources... [ 68%] generated/skbio.stats.distance.DistanceMatrix.write
reading sources... [ 68%] generated/skbio.stats.distance.anosim
reading sources... [ 68%] generated/skbio.stats.distance.bioenv
reading sources... [ 69%] generated/skbio.stats.distance.mantel
reading sources... [ 69%] generated/skbio.stats.distance.permanova
reading sources... [ 69%] generated/skbio.stats.distance.permdisp
reading sources... [ 69%] generated/skbio.stats.distance.pwmantel
reading sources... [ 69%] generated/skbio.stats.distance.randdm
reading sources... [ 69%] generated/skbio.stats.evolve
reading sources... [ 69%] generated/skbio.stats.evolve.hommola_cospeciation
reading sources... [ 69%] generated/skbio.stats.gradient
reading sources... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA
reading sources... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA.__eq__
reading sources... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA.__ge__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__getstate__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__gt__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__hash__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__le__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__lt__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__ne__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__str__
reading sources... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.get_trajectories
reading sources... [ 70%] generated/skbio.stats.gradient.CategoryResults
reading sources... [ 70%] generated/skbio.stats.gradient.CategoryResults.__eq__
reading sources... [ 70%] generated/skbio.stats.gradient.CategoryResults.__ge__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__getstate__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__gt__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__hash__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__le__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__lt__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__ne__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.__str__
reading sources... [ 71%] generated/skbio.stats.gradient.CategoryResults.to_files
reading sources... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA
reading sources... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__eq__
reading sources... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__ge__
reading sources... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__getstate__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__gt__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__hash__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__le__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__lt__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__ne__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__str__
reading sources... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.get_trajectories
reading sources... [ 72%] generated/skbio.stats.gradient.GradientANOVA
reading sources... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__eq__
reading sources... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__ge__
reading sources... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__getstate__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__gt__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__hash__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__le__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__lt__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__ne__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__str__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVA.get_trajectories
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__eq__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__ge__
reading sources... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__getstate__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__gt__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__hash__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__le__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__lt__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__ne__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__str__
reading sources... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.to_files
reading sources... [ 74%] generated/skbio.stats.gradient.GroupResults
reading sources... [ 74%] generated/skbio.stats.gradient.GroupResults.__eq__
reading sources... [ 74%] generated/skbio.stats.gradient.GroupResults.__ge__
reading sources... [ 74%] generated/skbio.stats.gradient.GroupResults.__getstate__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__gt__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__hash__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__le__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__lt__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__ne__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.__str__
reading sources... [ 75%] generated/skbio.stats.gradient.GroupResults.to_files
reading sources... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA
reading sources... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__eq__
reading sources... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__ge__
reading sources... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__getstate__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__gt__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__hash__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__le__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__lt__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__ne__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__str__
reading sources... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.get_trajectories
reading sources... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA
reading sources... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__eq__
reading sources... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__ge__
reading sources... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__getstate__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__gt__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__hash__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__le__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__lt__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__ne__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__str__
reading sources... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.get_trajectories
reading sources... [ 77%] generated/skbio.stats.isubsample
reading sources... [ 77%] generated/skbio.stats.ordination
reading sources... [ 77%] generated/skbio.stats.ordination.OrdinationResults
reading sources... [ 77%] generated/skbio.stats.ordination.OrdinationResults.__eq__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__ge__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__getstate__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__gt__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__hash__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__le__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__lt__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__ne__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__str__
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.plot
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.read
reading sources... [ 78%] generated/skbio.stats.ordination.OrdinationResults.rename
reading sources... [ 79%] generated/skbio.stats.ordination.OrdinationResults.write
reading sources... [ 79%] generated/skbio.stats.ordination.ca
reading sources... [ 79%] generated/skbio.stats.ordination.cca
reading sources... [ 79%] generated/skbio.stats.ordination.corr
reading sources... [ 79%] generated/skbio.stats.ordination.e_matrix
reading sources... [ 79%] generated/skbio.stats.ordination.f_matrix
reading sources... [ 79%] generated/skbio.stats.ordination.mean_and_std
reading sources... [ 79%] generated/skbio.stats.ordination.pcoa
reading sources... [ 79%] generated/skbio.stats.ordination.pcoa_biplot
reading sources... [ 79%] generated/skbio.stats.ordination.rda
reading sources... [ 79%] generated/skbio.stats.ordination.scale
reading sources... [ 79%] generated/skbio.stats.ordination.svd_rank
reading sources... [ 80%] generated/skbio.stats.power
reading sources... [ 80%] generated/skbio.stats.power.confidence_bound
reading sources... [ 80%] generated/skbio.stats.power.paired_subsamples
reading sources... [ 80%] generated/skbio.stats.power.subsample_paired_power
reading sources... [ 80%] generated/skbio.stats.power.subsample_power
reading sources... [ 80%] generated/skbio.stats.subsample_counts
reading sources... [ 80%] generated/skbio.table.Table
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:455: UserWarning: Unknown section Paramaters in the docstring of Table in /usr/lib/python3/dist-packages/biom/table.py.
  warn(msg)
reading sources... [ 80%] generated/skbio.table.Table.__eq__
reading sources... [ 80%] generated/skbio.table.Table.__ge__
reading sources... [ 80%] generated/skbio.table.Table.__getitem__
reading sources... [ 80%] generated/skbio.table.Table.__getstate__
reading sources... [ 81%] generated/skbio.table.Table.__gt__
reading sources... [ 81%] generated/skbio.table.Table.__iter__
reading sources... [ 81%] generated/skbio.table.Table.__le__
reading sources... [ 81%] generated/skbio.table.Table.__lt__
reading sources... [ 81%] generated/skbio.table.Table.__ne__
reading sources... [ 81%] generated/skbio.table.Table.__str__
reading sources... [ 81%] generated/skbio.table.Table.add_group_metadata
reading sources... [ 81%] generated/skbio.table.Table.add_metadata
reading sources... [ 81%] generated/skbio.table.Table.align_to
reading sources... [ 81%] generated/skbio.table.Table.align_to_dataframe
reading sources... [ 81%] generated/skbio.table.Table.align_tree
reading sources... [ 82%] generated/skbio.table.Table.collapse
reading sources... [ 82%] generated/skbio.table.Table.concat
reading sources... [ 82%] generated/skbio.table.Table.copy
reading sources... [ 82%] generated/skbio.table.Table.data
reading sources... [ 82%] generated/skbio.table.Table.del_metadata
reading sources... [ 82%] generated/skbio.table.Table.delimited_self
reading sources... [ 82%] generated/skbio.table.Table.descriptive_equality
reading sources... [ 82%] generated/skbio.table.Table.exists
reading sources... [ 82%] generated/skbio.table.Table.filter
reading sources... [ 82%] generated/skbio.table.Table.from_adjacency
reading sources... [ 82%] generated/skbio.table.Table.from_hdf5
reading sources... [ 83%] generated/skbio.table.Table.from_json
reading sources... [ 83%] generated/skbio.table.Table.from_tsv
reading sources... [ 83%] generated/skbio.table.Table.get_table_density
reading sources... [ 83%] generated/skbio.table.Table.get_value_by_ids
reading sources... [ 83%] generated/skbio.table.Table.group_metadata
reading sources... [ 83%] generated/skbio.table.Table.head
reading sources... [ 83%] generated/skbio.table.Table.ids
reading sources... [ 83%] generated/skbio.table.Table.index
reading sources... [ 83%] generated/skbio.table.Table.is_empty
reading sources... [ 83%] generated/skbio.table.Table.iter
reading sources... [ 83%] generated/skbio.table.Table.iter_data
reading sources... [ 84%] generated/skbio.table.Table.iter_pairwise
reading sources... [ 84%] generated/skbio.table.Table.length
reading sources... [ 84%] generated/skbio.table.Table.max
reading sources... [ 84%] generated/skbio.table.Table.merge
reading sources... [ 84%] generated/skbio.table.Table.metadata
reading sources... [ 84%] generated/skbio.table.Table.metadata_to_dataframe
reading sources... [ 84%] generated/skbio.table.Table.min
reading sources... [ 84%] generated/skbio.table.Table.nonzero
reading sources... [ 84%] generated/skbio.table.Table.nonzero_counts
reading sources... [ 84%] generated/skbio.table.Table.norm
reading sources... [ 84%] generated/skbio.table.Table.pa
reading sources... [ 85%] generated/skbio.table.Table.partition
reading sources... [ 85%] generated/skbio.table.Table.rankdata
reading sources... [ 85%] generated/skbio.table.Table.read
reading sources... [ 85%] generated/skbio.table.Table.reduce
reading sources... [ 85%] generated/skbio.table.Table.remove_empty
reading sources... [ 85%] generated/skbio.table.Table.sort
reading sources... [ 85%] generated/skbio.table.Table.sort_order
reading sources... [ 85%] generated/skbio.table.Table.subsample
reading sources... [ 85%] generated/skbio.table.Table.sum
reading sources... [ 85%] generated/skbio.table.Table.to_anndata
reading sources... [ 85%] generated/skbio.table.Table.to_dataframe
reading sources... [ 86%] generated/skbio.table.Table.to_hdf5
reading sources... [ 86%] generated/skbio.table.Table.to_json
reading sources... [ 86%] generated/skbio.table.Table.to_tsv
reading sources... [ 86%] generated/skbio.table.Table.transform
reading sources... [ 86%] generated/skbio.table.Table.transpose
reading sources... [ 86%] generated/skbio.table.Table.update_ids
reading sources... [ 86%] generated/skbio.table.Table.write
reading sources... [ 86%] generated/skbio.table.example_table
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:455: UserWarning: Unknown section Paramaters in the docstring of Table
  warn(msg)
reading sources... [ 86%] generated/skbio.tree.TreeNode
reading sources... [ 86%] generated/skbio.tree.TreeNode.__copy__
reading sources... [ 86%] generated/skbio.tree.TreeNode.__deepcopy__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__eq__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__ge__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__getitem__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__getstate__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__gt__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__hash__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__iter__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__le__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__len__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__lt__
reading sources... [ 87%] generated/skbio.tree.TreeNode.__ne__
reading sources... [ 88%] generated/skbio.tree.TreeNode.__str__
reading sources... [ 88%] generated/skbio.tree.TreeNode.accumulate_to_ancestor
reading sources... [ 88%] generated/skbio.tree.TreeNode.ancestors
reading sources... [ 88%] generated/skbio.tree.TreeNode.append
reading sources... [ 88%] generated/skbio.tree.TreeNode.ascii_art
reading sources... [ 88%] generated/skbio.tree.TreeNode.assign_ids
reading sources... [ 88%] generated/skbio.tree.TreeNode.assign_supports
reading sources... [ 88%] generated/skbio.tree.TreeNode.bifurcate
reading sources... [ 88%] generated/skbio.tree.TreeNode.cache_attr
reading sources... [ 88%] generated/skbio.tree.TreeNode.compare_rfd
reading sources... [ 88%] generated/skbio.tree.TreeNode.compare_subsets
reading sources... [ 88%] generated/skbio.tree.TreeNode.compare_tip_distances
reading sources... [ 89%] generated/skbio.tree.TreeNode.copy
reading sources... [ 89%] generated/skbio.tree.TreeNode.count
reading sources... [ 89%] generated/skbio.tree.TreeNode.create_caches
reading sources... [ 89%] generated/skbio.tree.TreeNode.deepcopy
reading sources... [ 89%] generated/skbio.tree.TreeNode.descending_branch_length
reading sources... [ 89%] generated/skbio.tree.TreeNode.distance
reading sources... [ 89%] generated/skbio.tree.TreeNode.extend
reading sources... [ 89%] generated/skbio.tree.TreeNode.find
reading sources... [ 89%] generated/skbio.tree.TreeNode.find_all
reading sources... [ 89%] generated/skbio.tree.TreeNode.find_by_func
reading sources... [ 89%] generated/skbio.tree.TreeNode.find_by_id
reading sources... [ 90%] generated/skbio.tree.TreeNode.from_linkage_matrix
reading sources... [ 90%] generated/skbio.tree.TreeNode.from_taxdump
reading sources... [ 90%] generated/skbio.tree.TreeNode.from_taxonomy
reading sources... [ 90%] generated/skbio.tree.TreeNode.get_max_distance
reading sources... [ 90%] generated/skbio.tree.TreeNode.has_children
reading sources... [ 90%] generated/skbio.tree.TreeNode.index_tree
reading sources... [ 90%] generated/skbio.tree.TreeNode.insert
reading sources... [ 90%] generated/skbio.tree.TreeNode.invalidate_caches
reading sources... [ 90%] generated/skbio.tree.TreeNode.is_root
reading sources... [ 90%] generated/skbio.tree.TreeNode.is_tip
reading sources... [ 90%] generated/skbio.tree.TreeNode.lca
reading sources... [ 91%] generated/skbio.tree.TreeNode.levelorder
reading sources... [ 91%] generated/skbio.tree.TreeNode.lowest_common_ancestor
reading sources... [ 91%] generated/skbio.tree.TreeNode.neighbors
reading sources... [ 91%] generated/skbio.tree.TreeNode.non_tips
reading sources... [ 91%] generated/skbio.tree.TreeNode.observed_node_counts
reading sources... [ 91%] generated/skbio.tree.TreeNode.pop
reading sources... [ 91%] generated/skbio.tree.TreeNode.postorder
reading sources... [ 91%] generated/skbio.tree.TreeNode.pre_and_postorder
reading sources... [ 91%] generated/skbio.tree.TreeNode.preorder
reading sources... [ 91%] generated/skbio.tree.TreeNode.prune
reading sources... [ 91%] generated/skbio.tree.TreeNode.read
reading sources... [ 92%] generated/skbio.tree.TreeNode.remove
reading sources... [ 92%] generated/skbio.tree.TreeNode.remove_deleted
reading sources... [ 92%] generated/skbio.tree.TreeNode.root
reading sources... [ 92%] generated/skbio.tree.TreeNode.root_at
reading sources... [ 92%] generated/skbio.tree.TreeNode.root_at_midpoint
reading sources... [ 92%] generated/skbio.tree.TreeNode.root_by_outgroup
reading sources... [ 92%] generated/skbio.tree.TreeNode.shear
reading sources... [ 92%] generated/skbio.tree.TreeNode.shuffle
reading sources... [ 92%] generated/skbio.tree.TreeNode.siblings
reading sources... [ 92%] generated/skbio.tree.TreeNode.subset
reading sources... [ 92%] generated/skbio.tree.TreeNode.subsets
reading sources... [ 93%] generated/skbio.tree.TreeNode.subtree
reading sources... [ 93%] generated/skbio.tree.TreeNode.tip_tip_distances
reading sources... [ 93%] generated/skbio.tree.TreeNode.tips
reading sources... [ 93%] generated/skbio.tree.TreeNode.to_array
reading sources... [ 93%] generated/skbio.tree.TreeNode.to_taxonomy
reading sources... [ 93%] generated/skbio.tree.TreeNode.traverse
reading sources... [ 93%] generated/skbio.tree.TreeNode.unpack
reading sources... [ 93%] generated/skbio.tree.TreeNode.unpack_by_func
reading sources... [ 93%] generated/skbio.tree.TreeNode.unroot
reading sources... [ 93%] generated/skbio.tree.TreeNode.unrooted_copy
reading sources... [ 93%] generated/skbio.tree.TreeNode.unrooted_deepcopy
reading sources... [ 94%] generated/skbio.tree.TreeNode.unrooted_move
reading sources... [ 94%] generated/skbio.tree.TreeNode.write
reading sources... [ 94%] generated/skbio.tree.majority_rule
reading sources... [ 94%] generated/skbio.tree.nj
reading sources... [ 94%] generated/skbio.tree.nni
reading sources... [ 94%] generated/skbio.util.EfficiencyWarning
reading sources... [ 94%] generated/skbio.util.RepresentationWarning
reading sources... [ 94%] generated/skbio.util.assert_data_frame_almost_equal
reading sources... [ 94%] generated/skbio.util.assert_ordination_results_equal
reading sources... [ 94%] generated/skbio.util.cardinal_to_ordinal
reading sources... [ 94%] generated/skbio.util.classproperty
reading sources... [ 95%] generated/skbio.util.classproperty.__delete__
reading sources... [ 95%] generated/skbio.util.classproperty.__eq__
reading sources... [ 95%] generated/skbio.util.classproperty.__ge__
reading sources... [ 95%] generated/skbio.util.classproperty.__get__
reading sources... [ 95%] generated/skbio.util.classproperty.__getstate__
reading sources... [ 95%] generated/skbio.util.classproperty.__gt__
reading sources... [ 95%] generated/skbio.util.classproperty.__hash__
reading sources... [ 95%] generated/skbio.util.classproperty.__le__
reading sources... [ 95%] generated/skbio.util.classproperty.__lt__
reading sources... [ 95%] generated/skbio.util.classproperty.__ne__
reading sources... [ 95%] generated/skbio.util.classproperty.__set__
reading sources... [ 96%] generated/skbio.util.classproperty.__set_name__
reading sources... [ 96%] generated/skbio.util.classproperty.__str__
reading sources... [ 96%] generated/skbio.util.classproperty.deleter
reading sources... [ 96%] generated/skbio.util.classproperty.getter
reading sources... [ 96%] generated/skbio.util.classproperty.setter
reading sources... [ 96%] generated/skbio.util.find_duplicates
reading sources... [ 96%] generated/skbio.util.get_data_path
reading sources... [ 96%] generated/skbio.util.safe_md5
reading sources... [ 96%] generated/skbio.workflow.Workflow
reading sources... [ 96%] generated/skbio.workflow.Workflow.__call__
reading sources... [ 96%] generated/skbio.workflow.Workflow.__eq__
reading sources... [ 96%] generated/skbio.workflow.Workflow.__ge__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__getstate__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__gt__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__hash__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__le__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__lt__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__ne__
reading sources... [ 97%] generated/skbio.workflow.Workflow.__str__
reading sources... [ 97%] generated/skbio.workflow.Workflow.initialize_state
reading sources... [ 97%] generated/skbio.workflow.method
reading sources... [ 97%] generated/skbio.workflow.method.__call__
reading sources... [ 97%] generated/skbio.workflow.method.__eq__
reading sources... [ 98%] generated/skbio.workflow.method.__ge__
reading sources... [ 98%] generated/skbio.workflow.method.__getstate__
reading sources... [ 98%] generated/skbio.workflow.method.__gt__
reading sources... [ 98%] generated/skbio.workflow.method.__hash__
reading sources... [ 98%] generated/skbio.workflow.method.__le__
reading sources... [ 98%] generated/skbio.workflow.method.__lt__
reading sources... [ 98%] generated/skbio.workflow.method.__ne__
reading sources... [ 98%] generated/skbio.workflow.method.__str__
reading sources... [ 98%] generated/skbio.workflow.requires
reading sources... [ 98%] generated/skbio.workflow.requires.__call__
reading sources... [ 98%] generated/skbio.workflow.requires.__eq__
reading sources... [ 99%] generated/skbio.workflow.requires.__ge__
reading sources... [ 99%] generated/skbio.workflow.requires.__getstate__
reading sources... [ 99%] generated/skbio.workflow.requires.__gt__
reading sources... [ 99%] generated/skbio.workflow.requires.__hash__
reading sources... [ 99%] generated/skbio.workflow.requires.__le__
reading sources... [ 99%] generated/skbio.workflow.requires.__lt__
reading sources... [ 99%] generated/skbio.workflow.requires.__ne__
reading sources... [ 99%] generated/skbio.workflow.requires.__str__
reading sources... [ 99%] index
reading sources... [ 99%] io
reading sources... [ 99%] metadata
reading sources... [100%] sequence
reading sources... [100%] stats
reading sources... [100%] table
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:455: UserWarning: Unknown section Paramaters in the docstring of Table in /usr/lib/python3/dist-packages/biom/table.py.
  warn(msg)
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:455: UserWarning: Unknown section Paramaters in the docstring of Table
  warn(msg)
reading sources... [100%] tree
reading sources... [100%] util
reading sources... [100%] workflow

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets... 
copying static files... done
copying extra files... done
copying assets: done
writing output... [  0%] alignment
writing output... [  0%] diversity
writing output... [  0%] embedding
writing output... [  0%] generated/skbio.alignment.AlignPath
writing output... [  0%] generated/skbio.alignment.AlignPath.__eq__
writing output... [  1%] generated/skbio.alignment.AlignPath.__ge__
writing output... [  1%] generated/skbio.alignment.AlignPath.__getstate__
writing output... [  1%] generated/skbio.alignment.AlignPath.__gt__
writing output... [  1%] generated/skbio.alignment.AlignPath.__hash__
writing output... [  1%] generated/skbio.alignment.AlignPath.__le__
writing output... [  1%] generated/skbio.alignment.AlignPath.__lt__
writing output... [  1%] generated/skbio.alignment.AlignPath.__ne__
writing output... [  1%] generated/skbio.alignment.AlignPath.__str__
writing output... [  1%] generated/skbio.alignment.AlignPath.from_bits
writing output... [  1%] generated/skbio.alignment.AlignPath.from_coordinates
writing output... [  1%] generated/skbio.alignment.AlignPath.from_indices
writing output... [  2%] generated/skbio.alignment.AlignPath.from_tabular
writing output... [  2%] generated/skbio.alignment.AlignPath.to_bits
writing output... [  2%] generated/skbio.alignment.AlignPath.to_coordinates
writing output... [  2%] generated/skbio.alignment.AlignPath.to_indices
writing output... [  2%] generated/skbio.alignment.AlignmentStructure
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__eq__
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__ge__
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__getitem__
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__getstate__
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__gt__
writing output... [  2%] generated/skbio.alignment.AlignmentStructure.__hash__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.__le__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.__lt__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.__ne__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.__setstate__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.__str__
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.is_zero_based
writing output... [  3%] generated/skbio.alignment.AlignmentStructure.set_zero_based
writing output... [  3%] generated/skbio.alignment.PairAlignPath
writing output... [  3%] generated/skbio.alignment.PairAlignPath.__eq__
writing output... [  3%] generated/skbio.alignment.PairAlignPath.__ge__
writing output... [  3%] generated/skbio.alignment.PairAlignPath.__getstate__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__gt__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__hash__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__le__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__lt__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__ne__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.__str__
writing output... [  4%] generated/skbio.alignment.PairAlignPath.from_bits
writing output... [  4%] generated/skbio.alignment.PairAlignPath.from_cigar
writing output... [  4%] generated/skbio.alignment.PairAlignPath.from_coordinates
writing output... [  4%] generated/skbio.alignment.PairAlignPath.from_indices
writing output... [  4%] generated/skbio.alignment.PairAlignPath.from_tabular
writing output... [  4%] generated/skbio.alignment.PairAlignPath.to_bits
writing output... [  5%] generated/skbio.alignment.PairAlignPath.to_cigar
writing output... [  5%] generated/skbio.alignment.PairAlignPath.to_coordinates
writing output... [  5%] generated/skbio.alignment.PairAlignPath.to_indices
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__call__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__eq__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__ge__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__getstate__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__gt__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__hash__
writing output... [  5%] generated/skbio.alignment.StripedSmithWaterman.__le__
writing output... [  6%] generated/skbio.alignment.StripedSmithWaterman.__lt__
writing output... [  6%] generated/skbio.alignment.StripedSmithWaterman.__ne__
writing output... [  6%] generated/skbio.alignment.StripedSmithWaterman.__setstate__
writing output... [  6%] generated/skbio.alignment.StripedSmithWaterman.__str__
writing output... [  6%] generated/skbio.alignment.TabularMSA
writing output... [  6%] generated/skbio.alignment.TabularMSA.__bool__
writing output... [  6%] generated/skbio.alignment.TabularMSA.__contains__
writing output... [  6%] generated/skbio.alignment.TabularMSA.__copy__
writing output... [  6%] generated/skbio.alignment.TabularMSA.__deepcopy__
writing output... [  6%] generated/skbio.alignment.TabularMSA.__eq__
writing output... [  6%] generated/skbio.alignment.TabularMSA.__ge__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__getitem__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__getstate__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__gt__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__iter__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__le__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__len__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__lt__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__ne__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__reversed__
writing output... [  7%] generated/skbio.alignment.TabularMSA.__str__
writing output... [  7%] generated/skbio.alignment.TabularMSA.append
writing output... [  8%] generated/skbio.alignment.TabularMSA.consensus
writing output... [  8%] generated/skbio.alignment.TabularMSA.conservation
writing output... [  8%] generated/skbio.alignment.TabularMSA.extend
writing output... [  8%] generated/skbio.alignment.TabularMSA.from_dict
writing output... [  8%] generated/skbio.alignment.TabularMSA.from_path_seqs
writing output... [  8%] generated/skbio.alignment.TabularMSA.gap_frequencies
writing output... [  8%] generated/skbio.alignment.TabularMSA.has_metadata
writing output... [  8%] generated/skbio.alignment.TabularMSA.has_positional_metadata
writing output... [  8%] generated/skbio.alignment.TabularMSA.iter_positions
writing output... [  8%] generated/skbio.alignment.TabularMSA.join
writing output... [  8%] generated/skbio.alignment.TabularMSA.read
writing output... [  9%] generated/skbio.alignment.TabularMSA.reassign_index
writing output... [  9%] generated/skbio.alignment.TabularMSA.sort
writing output... [  9%] generated/skbio.alignment.TabularMSA.to_dict
writing output... [  9%] generated/skbio.alignment.TabularMSA.write
writing output... [  9%] generated/skbio.alignment.global_pairwise_align
writing output... [  9%] generated/skbio.alignment.global_pairwise_align_nucleotide
writing output... [  9%] generated/skbio.alignment.global_pairwise_align_protein
writing output... [  9%] generated/skbio.alignment.local_pairwise_align
writing output... [  9%] generated/skbio.alignment.local_pairwise_align_nucleotide
writing output... [  9%] generated/skbio.alignment.local_pairwise_align_protein
writing output... [  9%] generated/skbio.alignment.local_pairwise_align_ssw
writing output... [ 10%] generated/skbio.alignment.make_identity_substitution_matrix
writing output... [ 10%] generated/skbio.diversity.alpha
writing output... [ 10%] generated/skbio.diversity.alpha.ace
writing output... [ 10%] generated/skbio.diversity.alpha.berger_parker_d
writing output... [ 10%] generated/skbio.diversity.alpha.brillouin_d
writing output... [ 10%] generated/skbio.diversity.alpha.chao1
writing output... [ 10%] generated/skbio.diversity.alpha.chao1_ci
writing output... [ 10%] generated/skbio.diversity.alpha.dominance
writing output... [ 10%] generated/skbio.diversity.alpha.doubles
writing output... [ 10%] generated/skbio.diversity.alpha.enspie
writing output... [ 10%] generated/skbio.diversity.alpha.esty_ci
writing output... [ 11%] generated/skbio.diversity.alpha.faith_pd
writing output... [ 11%] generated/skbio.diversity.alpha.fisher_alpha
writing output... [ 11%] generated/skbio.diversity.alpha.gini_index
writing output... [ 11%] generated/skbio.diversity.alpha.goods_coverage
writing output... [ 11%] generated/skbio.diversity.alpha.heip_e
writing output... [ 11%] generated/skbio.diversity.alpha.hill
writing output... [ 11%] generated/skbio.diversity.alpha.inv_simpson
writing output... [ 11%] generated/skbio.diversity.alpha.kempton_taylor_q
writing output... [ 11%] generated/skbio.diversity.alpha.lladser_ci
writing output... [ 11%] generated/skbio.diversity.alpha.lladser_pe
writing output... [ 11%] generated/skbio.diversity.alpha.margalef
writing output... [ 12%] generated/skbio.diversity.alpha.mcintosh_d
writing output... [ 12%] generated/skbio.diversity.alpha.mcintosh_e
writing output... [ 12%] generated/skbio.diversity.alpha.menhinick
writing output... [ 12%] generated/skbio.diversity.alpha.michaelis_menten_fit
writing output... [ 12%] generated/skbio.diversity.alpha.observed_features
writing output... [ 12%] generated/skbio.diversity.alpha.observed_otus
writing output... [ 12%] generated/skbio.diversity.alpha.osd
writing output... [ 12%] generated/skbio.diversity.alpha.phydiv
writing output... [ 12%] generated/skbio.diversity.alpha.pielou_e
writing output... [ 12%] generated/skbio.diversity.alpha.renyi
writing output... [ 12%] generated/skbio.diversity.alpha.robbins
writing output... [ 12%] generated/skbio.diversity.alpha.shannon
writing output... [ 13%] generated/skbio.diversity.alpha.simpson
writing output... [ 13%] generated/skbio.diversity.alpha.simpson_d
writing output... [ 13%] generated/skbio.diversity.alpha.simpson_e
writing output... [ 13%] generated/skbio.diversity.alpha.singles
writing output... [ 13%] generated/skbio.diversity.alpha.sobs
writing output... [ 13%] generated/skbio.diversity.alpha.strong
writing output... [ 13%] generated/skbio.diversity.alpha.tsallis
writing output... [ 13%] generated/skbio.diversity.alpha_diversity
writing output... [ 13%] generated/skbio.diversity.beta
writing output... [ 13%] generated/skbio.diversity.beta.unweighted_unifrac
writing output... [ 13%] generated/skbio.diversity.beta.weighted_unifrac
writing output... [ 14%] generated/skbio.diversity.beta_diversity
writing output... [ 14%] generated/skbio.diversity.block_beta_diversity
writing output... [ 14%] generated/skbio.diversity.get_alpha_diversity_metrics
writing output... [ 14%] generated/skbio.diversity.get_beta_diversity_metrics
writing output... [ 14%] generated/skbio.diversity.partial_beta_diversity
writing output... [ 14%] generated/skbio.embedding.Embedding
writing output... [ 14%] generated/skbio.embedding.Embedding.__eq__
writing output... [ 14%] generated/skbio.embedding.Embedding.__ge__
writing output... [ 14%] generated/skbio.embedding.Embedding.__getstate__
writing output... [ 14%] generated/skbio.embedding.Embedding.__gt__
writing output... [ 14%] generated/skbio.embedding.Embedding.__hash__
writing output... [ 15%] generated/skbio.embedding.Embedding.__le__
writing output... [ 15%] generated/skbio.embedding.Embedding.__lt__
writing output... [ 15%] generated/skbio.embedding.Embedding.__ne__
writing output... [ 15%] generated/skbio.embedding.Embedding.__str__
writing output... [ 15%] generated/skbio.embedding.Embedding.bytes
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding.__eq__
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding.__ge__
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding.__getstate__
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding.__gt__
writing output... [ 15%] generated/skbio.embedding.ProteinEmbedding.__hash__
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.__le__
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.__lt__
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.__ne__
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.__str__
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.bytes
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.read
writing output... [ 16%] generated/skbio.embedding.ProteinEmbedding.write
writing output... [ 16%] generated/skbio.embedding.ProteinVector
writing output... [ 16%] generated/skbio.embedding.ProteinVector.__eq__
writing output... [ 16%] generated/skbio.embedding.ProteinVector.__ge__
writing output... [ 16%] generated/skbio.embedding.ProteinVector.__getstate__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__gt__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__hash__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__le__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__lt__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__ne__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.__str__
writing output... [ 17%] generated/skbio.embedding.ProteinVector.bytes
writing output... [ 17%] generated/skbio.embedding.ProteinVector.read
writing output... [ 17%] generated/skbio.embedding.ProteinVector.write
writing output... [ 17%] generated/skbio.embedding.SequenceEmbedding
writing output... [ 17%] generated/skbio.embedding.SequenceEmbedding.__eq__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__ge__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__getstate__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__gt__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__hash__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__le__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__lt__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__ne__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.__str__
writing output... [ 18%] generated/skbio.embedding.SequenceEmbedding.bytes
writing output... [ 18%] generated/skbio.embedding.SequenceVector
writing output... [ 18%] generated/skbio.embedding.SequenceVector.__eq__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__ge__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__getstate__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__gt__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__hash__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__le__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__lt__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__ne__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.__str__
writing output... [ 19%] generated/skbio.embedding.SequenceVector.bytes
writing output... [ 19%] generated/skbio.embedding.embed_vec_to_dataframe
writing output... [ 19%] generated/skbio.embedding.embed_vec_to_distances
writing output... [ 20%] generated/skbio.embedding.embed_vec_to_numpy
writing output... [ 20%] generated/skbio.embedding.embed_vec_to_ordination
writing output... [ 20%] generated/skbio.io.format.binary_dm
writing output... [ 20%] generated/skbio.io.format.biom
writing output... [ 20%] generated/skbio.io.format.blast6
writing output... [ 20%] generated/skbio.io.format.blast7
writing output... [ 20%] generated/skbio.io.format.clustal
writing output... [ 20%] generated/skbio.io.format.embed
writing output... [ 20%] generated/skbio.io.format.embl
writing output... [ 20%] generated/skbio.io.format.fasta
writing output... [ 20%] generated/skbio.io.format.fastq
writing output... [ 21%] generated/skbio.io.format.genbank
writing output... [ 21%] generated/skbio.io.format.gff3
writing output... [ 21%] generated/skbio.io.format.lsmat
writing output... [ 21%] generated/skbio.io.format.newick
writing output... [ 21%] generated/skbio.io.format.ordination
writing output... [ 21%] generated/skbio.io.format.phylip
writing output... [ 21%] generated/skbio.io.format.qseq
writing output... [ 21%] generated/skbio.io.format.sample_metadata
writing output... [ 21%] generated/skbio.io.format.stockholm
writing output... [ 21%] generated/skbio.io.format.taxdump
writing output... [ 21%] generated/skbio.io.registry
writing output... [ 21%] generated/skbio.io.registry.Format
writing output... [ 22%] generated/skbio.io.registry.Format.__eq__
writing output... [ 22%] generated/skbio.io.registry.Format.__ge__
writing output... [ 22%] generated/skbio.io.registry.Format.__getstate__
writing output... [ 22%] generated/skbio.io.registry.Format.__gt__
writing output... [ 22%] generated/skbio.io.registry.Format.__hash__
writing output... [ 22%] generated/skbio.io.registry.Format.__le__
writing output... [ 22%] generated/skbio.io.registry.Format.__lt__
writing output... [ 22%] generated/skbio.io.registry.Format.__ne__
writing output... [ 22%] generated/skbio.io.registry.Format.__str__
writing output... [ 22%] generated/skbio.io.registry.Format.reader
writing output... [ 22%] generated/skbio.io.registry.Format.sniffer
writing output... [ 23%] generated/skbio.io.registry.Format.writer
writing output... [ 23%] generated/skbio.io.registry.IORegistry
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__eq__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__ge__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__getstate__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__gt__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__hash__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__le__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__lt__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__ne__
writing output... [ 23%] generated/skbio.io.registry.IORegistry.__str__
writing output... [ 24%] generated/skbio.io.registry.IORegistry.add_format
writing output... [ 24%] generated/skbio.io.registry.IORegistry.create_format
writing output... [ 24%] generated/skbio.io.registry.IORegistry.get_reader
writing output... [ 24%] generated/skbio.io.registry.IORegistry.get_sniffer
writing output... [ 24%] generated/skbio.io.registry.IORegistry.get_writer
writing output... [ 24%] generated/skbio.io.registry.IORegistry.list_read_formats
writing output... [ 24%] generated/skbio.io.registry.IORegistry.list_write_formats
writing output... [ 24%] generated/skbio.io.registry.IORegistry.monkey_patch
writing output... [ 24%] generated/skbio.io.registry.IORegistry.read
writing output... [ 24%] generated/skbio.io.registry.IORegistry.sniff
writing output... [ 24%] generated/skbio.io.registry.IORegistry.write
writing output... [ 25%] generated/skbio.io.registry.create_format
writing output... [ 25%] generated/skbio.io.registry.read
writing output... [ 25%] generated/skbio.io.registry.sniff
writing output... [ 25%] generated/skbio.io.registry.write
writing output... [ 25%] generated/skbio.io.util
writing output... [ 25%] generated/skbio.io.util.open
writing output... [ 25%] generated/skbio.io.util.open_file
writing output... [ 25%] generated/skbio.io.util.open_files
writing output... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn
writing output... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn.__eq__
writing output... [ 25%] generated/skbio.metadata.CategoricalMetadataColumn.__ge__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__getstate__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__gt__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__le__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__lt__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__ne__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.__str__
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.drop_missing_values
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.filter_ids
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_ids
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_missing
writing output... [ 26%] generated/skbio.metadata.CategoricalMetadataColumn.get_value
writing output... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.has_missing_values
writing output... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.save
writing output... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.to_dataframe
writing output... [ 27%] generated/skbio.metadata.CategoricalMetadataColumn.to_series
writing output... [ 27%] generated/skbio.metadata.Interval
writing output... [ 27%] generated/skbio.metadata.Interval.__eq__
writing output... [ 27%] generated/skbio.metadata.Interval.__ge__
writing output... [ 27%] generated/skbio.metadata.Interval.__getstate__
writing output... [ 27%] generated/skbio.metadata.Interval.__gt__
writing output... [ 27%] generated/skbio.metadata.Interval.__le__
writing output... [ 27%] generated/skbio.metadata.Interval.__lt__
writing output... [ 28%] generated/skbio.metadata.Interval.__ne__
writing output... [ 28%] generated/skbio.metadata.Interval.__str__
writing output... [ 28%] generated/skbio.metadata.Interval.drop
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__copy__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__deepcopy__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__eq__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__ge__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__getstate__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__gt__
writing output... [ 28%] generated/skbio.metadata.IntervalMetadata.__le__
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.__lt__
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.__ne__
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.__str__
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.add
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.concat
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.drop
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.merge
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.query
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.read
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.sort
writing output... [ 29%] generated/skbio.metadata.IntervalMetadata.write
writing output... [ 29%] generated/skbio.metadata.MetadataColumn
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__eq__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__ge__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__getstate__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__gt__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__le__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__lt__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__ne__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.__str__
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.drop_missing_values
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.filter_ids
writing output... [ 30%] generated/skbio.metadata.MetadataColumn.get_ids
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.get_missing
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.get_value
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.has_missing_values
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.save
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.to_dataframe
writing output... [ 31%] generated/skbio.metadata.MetadataColumn.to_series
writing output... [ 31%] generated/skbio.metadata.NumericMetadataColumn
writing output... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__eq__
writing output... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__ge__
writing output... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__getstate__
writing output... [ 31%] generated/skbio.metadata.NumericMetadataColumn.__gt__
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__le__
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__lt__
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__ne__
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.__str__
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.drop_missing_values
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.filter_ids
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_ids
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_missing
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.get_value
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.has_missing_values
writing output... [ 32%] generated/skbio.metadata.NumericMetadataColumn.save
writing output... [ 33%] generated/skbio.metadata.NumericMetadataColumn.to_dataframe
writing output... [ 33%] generated/skbio.metadata.NumericMetadataColumn.to_series
writing output... [ 33%] generated/skbio.metadata.SampleMetadata
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__eq__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__ge__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__getstate__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__gt__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__le__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__lt__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__ne__
writing output... [ 33%] generated/skbio.metadata.SampleMetadata.__str__
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.filter_columns
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.filter_ids
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.get_column
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.get_ids
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.load
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.merge
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.read
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.save
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.to_dataframe
writing output... [ 34%] generated/skbio.metadata.SampleMetadata.write
writing output... [ 34%] generated/skbio.sequence.DNA
writing output... [ 35%] generated/skbio.sequence.DNA.__bool__
writing output... [ 35%] generated/skbio.sequence.DNA.__contains__
writing output... [ 35%] generated/skbio.sequence.DNA.__copy__
writing output... [ 35%] generated/skbio.sequence.DNA.__deepcopy__
writing output... [ 35%] generated/skbio.sequence.DNA.__eq__
writing output... [ 35%] generated/skbio.sequence.DNA.__ge__
writing output... [ 35%] generated/skbio.sequence.DNA.__getitem__
writing output... [ 35%] generated/skbio.sequence.DNA.__getstate__
writing output... [ 35%] generated/skbio.sequence.DNA.__gt__
writing output... [ 35%] generated/skbio.sequence.DNA.__iter__
writing output... [ 35%] generated/skbio.sequence.DNA.__le__
writing output... [ 36%] generated/skbio.sequence.DNA.__len__
writing output... [ 36%] generated/skbio.sequence.DNA.__lt__
writing output... [ 36%] generated/skbio.sequence.DNA.__ne__
writing output... [ 36%] generated/skbio.sequence.DNA.__reversed__
writing output... [ 36%] generated/skbio.sequence.DNA.__str__
writing output... [ 36%] generated/skbio.sequence.DNA.complement
writing output... [ 36%] generated/skbio.sequence.DNA.concat
writing output... [ 36%] generated/skbio.sequence.DNA.count
writing output... [ 36%] generated/skbio.sequence.DNA.definites
writing output... [ 36%] generated/skbio.sequence.DNA.degap
writing output... [ 36%] generated/skbio.sequence.DNA.degenerates
writing output... [ 37%] generated/skbio.sequence.DNA.distance
writing output... [ 37%] generated/skbio.sequence.DNA.expand_degenerates
writing output... [ 37%] generated/skbio.sequence.DNA.find_motifs
writing output... [ 37%] generated/skbio.sequence.DNA.find_with_regex
writing output... [ 37%] generated/skbio.sequence.DNA.frequencies
writing output... [ 37%] generated/skbio.sequence.DNA.gaps
writing output... [ 37%] generated/skbio.sequence.DNA.gc_content
writing output... [ 37%] generated/skbio.sequence.DNA.gc_frequency
writing output... [ 37%] generated/skbio.sequence.DNA.has_definites
writing output... [ 37%] generated/skbio.sequence.DNA.has_degenerates
writing output... [ 37%] generated/skbio.sequence.DNA.has_gaps
writing output... [ 38%] generated/skbio.sequence.DNA.has_interval_metadata
writing output... [ 38%] generated/skbio.sequence.DNA.has_metadata
writing output... [ 38%] generated/skbio.sequence.DNA.has_nondegenerates
writing output... [ 38%] generated/skbio.sequence.DNA.has_positional_metadata
writing output... [ 38%] generated/skbio.sequence.DNA.index
writing output... [ 38%] generated/skbio.sequence.DNA.is_reverse_complement
writing output... [ 38%] generated/skbio.sequence.DNA.iter_contiguous
writing output... [ 38%] generated/skbio.sequence.DNA.iter_kmers
writing output... [ 38%] generated/skbio.sequence.DNA.kmer_frequencies
writing output... [ 38%] generated/skbio.sequence.DNA.lowercase
writing output... [ 38%] generated/skbio.sequence.DNA.match_frequency
writing output... [ 38%] generated/skbio.sequence.DNA.matches
writing output... [ 39%] generated/skbio.sequence.DNA.mismatch_frequency
writing output... [ 39%] generated/skbio.sequence.DNA.mismatches
writing output... [ 39%] generated/skbio.sequence.DNA.nondegenerates
writing output... [ 39%] generated/skbio.sequence.DNA.read
writing output... [ 39%] generated/skbio.sequence.DNA.replace
writing output... [ 39%] generated/skbio.sequence.DNA.reverse_complement
writing output... [ 39%] generated/skbio.sequence.DNA.to_definites
writing output... [ 39%] generated/skbio.sequence.DNA.to_indices
writing output... [ 39%] generated/skbio.sequence.DNA.to_regex
writing output... [ 39%] generated/skbio.sequence.DNA.transcribe
writing output... [ 39%] generated/skbio.sequence.DNA.translate
writing output... [ 40%] generated/skbio.sequence.DNA.translate_six_frames
writing output... [ 40%] generated/skbio.sequence.DNA.write
writing output... [ 40%] generated/skbio.sequence.GeneticCode
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__eq__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__ge__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__getstate__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__gt__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__le__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__lt__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__ne__
writing output... [ 40%] generated/skbio.sequence.GeneticCode.__str__
writing output... [ 41%] generated/skbio.sequence.GeneticCode.from_ncbi
writing output... [ 41%] generated/skbio.sequence.GeneticCode.translate
writing output... [ 41%] generated/skbio.sequence.GeneticCode.translate_six_frames
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__bool__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__contains__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__copy__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__deepcopy__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__eq__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__ge__
writing output... [ 41%] generated/skbio.sequence.GrammaredSequence.__getitem__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__getstate__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__gt__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__iter__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__le__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__len__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__lt__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__ne__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__reversed__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.__str__
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.concat
writing output... [ 42%] generated/skbio.sequence.GrammaredSequence.count
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.definites
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.degap
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.degenerates
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.distance
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.expand_degenerates
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.find_motifs
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.find_with_regex
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.frequencies
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.gaps
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.has_definites
writing output... [ 43%] generated/skbio.sequence.GrammaredSequence.has_degenerates
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.has_gaps
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.has_interval_metadata
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.has_metadata
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.has_nondegenerates
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.has_positional_metadata
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.index
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.iter_contiguous
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.iter_kmers
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.kmer_frequencies
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.lowercase
writing output... [ 44%] generated/skbio.sequence.GrammaredSequence.match_frequency
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.matches
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.mismatch_frequency
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.mismatches
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.nondegenerates
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.read
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.replace
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.to_definites
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.to_indices
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.to_regex
writing output... [ 45%] generated/skbio.sequence.GrammaredSequence.write
writing output... [ 45%] generated/skbio.sequence.Protein
writing output... [ 46%] generated/skbio.sequence.Protein.__bool__
writing output... [ 46%] generated/skbio.sequence.Protein.__contains__
writing output... [ 46%] generated/skbio.sequence.Protein.__copy__
writing output... [ 46%] generated/skbio.sequence.Protein.__deepcopy__
writing output... [ 46%] generated/skbio.sequence.Protein.__eq__
writing output... [ 46%] generated/skbio.sequence.Protein.__ge__
writing output... [ 46%] generated/skbio.sequence.Protein.__getitem__
writing output... [ 46%] generated/skbio.sequence.Protein.__getstate__
writing output... [ 46%] generated/skbio.sequence.Protein.__gt__
writing output... [ 46%] generated/skbio.sequence.Protein.__iter__
writing output... [ 46%] generated/skbio.sequence.Protein.__le__
writing output... [ 46%] generated/skbio.sequence.Protein.__len__
writing output... [ 47%] generated/skbio.sequence.Protein.__lt__
writing output... [ 47%] generated/skbio.sequence.Protein.__ne__
writing output... [ 47%] generated/skbio.sequence.Protein.__reversed__
writing output... [ 47%] generated/skbio.sequence.Protein.__str__
writing output... [ 47%] generated/skbio.sequence.Protein.concat
writing output... [ 47%] generated/skbio.sequence.Protein.count
writing output... [ 47%] generated/skbio.sequence.Protein.definites
writing output... [ 47%] generated/skbio.sequence.Protein.degap
writing output... [ 47%] generated/skbio.sequence.Protein.degenerates
writing output... [ 47%] generated/skbio.sequence.Protein.distance
writing output... [ 47%] generated/skbio.sequence.Protein.expand_degenerates
writing output... [ 48%] generated/skbio.sequence.Protein.find_motifs
writing output... [ 48%] generated/skbio.sequence.Protein.find_with_regex
writing output... [ 48%] generated/skbio.sequence.Protein.frequencies
writing output... [ 48%] generated/skbio.sequence.Protein.gaps
writing output... [ 48%] generated/skbio.sequence.Protein.has_definites
writing output... [ 48%] generated/skbio.sequence.Protein.has_degenerates
writing output... [ 48%] generated/skbio.sequence.Protein.has_gaps
writing output... [ 48%] generated/skbio.sequence.Protein.has_interval_metadata
writing output... [ 48%] generated/skbio.sequence.Protein.has_metadata
writing output... [ 48%] generated/skbio.sequence.Protein.has_nondegenerates
writing output... [ 48%] generated/skbio.sequence.Protein.has_positional_metadata
writing output... [ 49%] generated/skbio.sequence.Protein.has_stops
writing output... [ 49%] generated/skbio.sequence.Protein.index
writing output... [ 49%] generated/skbio.sequence.Protein.iter_contiguous
writing output... [ 49%] generated/skbio.sequence.Protein.iter_kmers
writing output... [ 49%] generated/skbio.sequence.Protein.kmer_frequencies
writing output... [ 49%] generated/skbio.sequence.Protein.lowercase
writing output... [ 49%] generated/skbio.sequence.Protein.match_frequency
writing output... [ 49%] generated/skbio.sequence.Protein.matches
writing output... [ 49%] generated/skbio.sequence.Protein.mismatch_frequency
writing output... [ 49%] generated/skbio.sequence.Protein.mismatches
writing output... [ 49%] generated/skbio.sequence.Protein.nondegenerates
writing output... [ 50%] generated/skbio.sequence.Protein.read
writing output... [ 50%] generated/skbio.sequence.Protein.replace
writing output... [ 50%] generated/skbio.sequence.Protein.stops
writing output... [ 50%] generated/skbio.sequence.Protein.to_definites
writing output... [ 50%] generated/skbio.sequence.Protein.to_indices
writing output... [ 50%] generated/skbio.sequence.Protein.to_regex
writing output... [ 50%] generated/skbio.sequence.Protein.write
writing output... [ 50%] generated/skbio.sequence.RNA
writing output... [ 50%] generated/skbio.sequence.RNA.__bool__
writing output... [ 50%] generated/skbio.sequence.RNA.__contains__
writing output... [ 50%] generated/skbio.sequence.RNA.__copy__
writing output... [ 51%] generated/skbio.sequence.RNA.__deepcopy__
writing output... [ 51%] generated/skbio.sequence.RNA.__eq__
writing output... [ 51%] generated/skbio.sequence.RNA.__ge__
writing output... [ 51%] generated/skbio.sequence.RNA.__getitem__
writing output... [ 51%] generated/skbio.sequence.RNA.__getstate__
writing output... [ 51%] generated/skbio.sequence.RNA.__gt__
writing output... [ 51%] generated/skbio.sequence.RNA.__iter__
writing output... [ 51%] generated/skbio.sequence.RNA.__le__
writing output... [ 51%] generated/skbio.sequence.RNA.__len__
writing output... [ 51%] generated/skbio.sequence.RNA.__lt__
writing output... [ 51%] generated/skbio.sequence.RNA.__ne__
writing output... [ 52%] generated/skbio.sequence.RNA.__reversed__
writing output... [ 52%] generated/skbio.sequence.RNA.__str__
writing output... [ 52%] generated/skbio.sequence.RNA.complement
writing output... [ 52%] generated/skbio.sequence.RNA.concat
writing output... [ 52%] generated/skbio.sequence.RNA.count
writing output... [ 52%] generated/skbio.sequence.RNA.definites
writing output... [ 52%] generated/skbio.sequence.RNA.degap
writing output... [ 52%] generated/skbio.sequence.RNA.degenerates
writing output... [ 52%] generated/skbio.sequence.RNA.distance
writing output... [ 52%] generated/skbio.sequence.RNA.expand_degenerates
writing output... [ 52%] generated/skbio.sequence.RNA.find_motifs
writing output... [ 53%] generated/skbio.sequence.RNA.find_with_regex
writing output... [ 53%] generated/skbio.sequence.RNA.frequencies
writing output... [ 53%] generated/skbio.sequence.RNA.gaps
writing output... [ 53%] generated/skbio.sequence.RNA.gc_content
writing output... [ 53%] generated/skbio.sequence.RNA.gc_frequency
writing output... [ 53%] generated/skbio.sequence.RNA.has_definites
writing output... [ 53%] generated/skbio.sequence.RNA.has_degenerates
writing output... [ 53%] generated/skbio.sequence.RNA.has_gaps
writing output... [ 53%] generated/skbio.sequence.RNA.has_interval_metadata
writing output... [ 53%] generated/skbio.sequence.RNA.has_metadata
writing output... [ 53%] generated/skbio.sequence.RNA.has_nondegenerates
writing output... [ 54%] generated/skbio.sequence.RNA.has_positional_metadata
writing output... [ 54%] generated/skbio.sequence.RNA.index
writing output... [ 54%] generated/skbio.sequence.RNA.is_reverse_complement
writing output... [ 54%] generated/skbio.sequence.RNA.iter_contiguous
writing output... [ 54%] generated/skbio.sequence.RNA.iter_kmers
writing output... [ 54%] generated/skbio.sequence.RNA.kmer_frequencies
writing output... [ 54%] generated/skbio.sequence.RNA.lowercase
writing output... [ 54%] generated/skbio.sequence.RNA.match_frequency
writing output... [ 54%] generated/skbio.sequence.RNA.matches
writing output... [ 54%] generated/skbio.sequence.RNA.mismatch_frequency
writing output... [ 54%] generated/skbio.sequence.RNA.mismatches
writing output... [ 54%] generated/skbio.sequence.RNA.nondegenerates
writing output... [ 55%] generated/skbio.sequence.RNA.read
writing output... [ 55%] generated/skbio.sequence.RNA.replace
writing output... [ 55%] generated/skbio.sequence.RNA.reverse_complement
writing output... [ 55%] generated/skbio.sequence.RNA.reverse_transcribe
writing output... [ 55%] generated/skbio.sequence.RNA.to_definites
writing output... [ 55%] generated/skbio.sequence.RNA.to_indices
writing output... [ 55%] generated/skbio.sequence.RNA.to_regex
writing output... [ 55%] generated/skbio.sequence.RNA.translate
writing output... [ 55%] generated/skbio.sequence.RNA.translate_six_frames
writing output... [ 55%] generated/skbio.sequence.RNA.write
writing output... [ 55%] generated/skbio.sequence.Sequence
writing output... [ 56%] generated/skbio.sequence.Sequence.__bool__
writing output... [ 56%] generated/skbio.sequence.Sequence.__contains__
writing output... [ 56%] generated/skbio.sequence.Sequence.__copy__
writing output... [ 56%] generated/skbio.sequence.Sequence.__deepcopy__
writing output... [ 56%] generated/skbio.sequence.Sequence.__eq__
writing output... [ 56%] generated/skbio.sequence.Sequence.__ge__
writing output... [ 56%] generated/skbio.sequence.Sequence.__getitem__
writing output... [ 56%] generated/skbio.sequence.Sequence.__getstate__
writing output... [ 56%] generated/skbio.sequence.Sequence.__gt__
writing output... [ 56%] generated/skbio.sequence.Sequence.__iter__
writing output... [ 56%] generated/skbio.sequence.Sequence.__le__
writing output... [ 57%] generated/skbio.sequence.Sequence.__len__
writing output... [ 57%] generated/skbio.sequence.Sequence.__lt__
writing output... [ 57%] generated/skbio.sequence.Sequence.__ne__
writing output... [ 57%] generated/skbio.sequence.Sequence.__reversed__
writing output... [ 57%] generated/skbio.sequence.Sequence.__str__
writing output... [ 57%] generated/skbio.sequence.Sequence.concat
writing output... [ 57%] generated/skbio.sequence.Sequence.count
writing output... [ 57%] generated/skbio.sequence.Sequence.distance
writing output... [ 57%] generated/skbio.sequence.Sequence.find_with_regex
writing output... [ 57%] generated/skbio.sequence.Sequence.frequencies
writing output... [ 57%] generated/skbio.sequence.Sequence.has_interval_metadata
writing output... [ 58%] generated/skbio.sequence.Sequence.has_metadata
writing output... [ 58%] generated/skbio.sequence.Sequence.has_positional_metadata
writing output... [ 58%] generated/skbio.sequence.Sequence.index
writing output... [ 58%] generated/skbio.sequence.Sequence.iter_contiguous
writing output... [ 58%] generated/skbio.sequence.Sequence.iter_kmers
writing output... [ 58%] generated/skbio.sequence.Sequence.kmer_frequencies
writing output... [ 58%] generated/skbio.sequence.Sequence.lowercase
writing output... [ 58%] generated/skbio.sequence.Sequence.match_frequency
writing output... [ 58%] generated/skbio.sequence.Sequence.matches
writing output... [ 58%] generated/skbio.sequence.Sequence.mismatch_frequency
writing output... [ 58%] generated/skbio.sequence.Sequence.mismatches
writing output... [ 59%] generated/skbio.sequence.Sequence.read
writing output... [ 59%] generated/skbio.sequence.Sequence.replace
writing output... [ 59%] generated/skbio.sequence.Sequence.to_indices
writing output... [ 59%] generated/skbio.sequence.Sequence.write
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__contains__
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__eq__
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__ge__
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__getitem__
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__getstate__
writing output... [ 59%] generated/skbio.sequence.SubstitutionMatrix.__gt__
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__le__
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__lt__
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__ne__
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.__str__
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.between
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.by_name
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.copy
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.filter
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.from_dict
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.from_iterable
writing output... [ 60%] generated/skbio.sequence.SubstitutionMatrix.get_names
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.identity
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.index
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.plot
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.read
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.redundant_form
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.rename
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.to_data_frame
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.to_dict
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.transpose
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.within
writing output... [ 61%] generated/skbio.sequence.SubstitutionMatrix.write
writing output... [ 62%] generated/skbio.sequence.distance
writing output... [ 62%] generated/skbio.sequence.distance.hamming
writing output... [ 62%] generated/skbio.sequence.distance.kmer_distance
writing output... [ 62%] generated/skbio.stats.composition
writing output... [ 62%] generated/skbio.stats.composition.alr
writing output... [ 62%] generated/skbio.stats.composition.alr_inv
writing output... [ 62%] generated/skbio.stats.composition.ancom
writing output... [ 62%] generated/skbio.stats.composition.centralize
writing output... [ 62%] generated/skbio.stats.composition.closure
writing output... [ 62%] generated/skbio.stats.composition.clr
writing output... [ 62%] generated/skbio.stats.composition.clr_inv
writing output... [ 62%] generated/skbio.stats.composition.dirmult_ttest
writing output... [ 63%] generated/skbio.stats.composition.ilr
writing output... [ 63%] generated/skbio.stats.composition.ilr_inv
writing output... [ 63%] generated/skbio.stats.composition.inner
writing output... [ 63%] generated/skbio.stats.composition.multi_replace
writing output... [ 63%] generated/skbio.stats.composition.multiplicative_replacement
writing output... [ 63%] generated/skbio.stats.composition.pairwise_vlr
writing output... [ 63%] generated/skbio.stats.composition.perturb
writing output... [ 63%] generated/skbio.stats.composition.perturb_inv
writing output... [ 63%] generated/skbio.stats.composition.power
writing output... [ 63%] generated/skbio.stats.composition.sbp_basis
writing output... [ 63%] generated/skbio.stats.composition.tree_basis
writing output... [ 64%] generated/skbio.stats.composition.vlr
writing output... [ 64%] generated/skbio.stats.distance
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__contains__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__eq__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__ge__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__getitem__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__getstate__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__gt__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__le__
writing output... [ 64%] generated/skbio.stats.distance.DissimilarityMatrix.__lt__
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.__ne__
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.__str__
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.between
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.copy
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.filter
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.from_iterable
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.index
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.plot
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.read
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.redundant_form
writing output... [ 65%] generated/skbio.stats.distance.DissimilarityMatrix.rename
writing output... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.to_data_frame
writing output... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.transpose
writing output... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.within
writing output... [ 66%] generated/skbio.stats.distance.DissimilarityMatrix.write
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__contains__
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__eq__
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__ge__
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__getitem__
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__getstate__
writing output... [ 66%] generated/skbio.stats.distance.DistanceMatrix.__gt__
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__le__
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__lt__
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__ne__
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.__str__
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.between
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.condensed_form
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.copy
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.filter
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.from_iterable
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.index
writing output... [ 67%] generated/skbio.stats.distance.DistanceMatrix.permute
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.plot
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.read
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.redundant_form
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.rename
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.to_data_frame
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.to_series
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.transpose
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.within
writing output... [ 68%] generated/skbio.stats.distance.DistanceMatrix.write
writing output... [ 68%] generated/skbio.stats.distance.anosim
writing output... [ 68%] generated/skbio.stats.distance.bioenv
writing output... [ 69%] generated/skbio.stats.distance.mantel
writing output... [ 69%] generated/skbio.stats.distance.permanova
writing output... [ 69%] generated/skbio.stats.distance.permdisp
writing output... [ 69%] generated/skbio.stats.distance.pwmantel
writing output... [ 69%] generated/skbio.stats.distance.randdm
writing output... [ 69%] generated/skbio.stats.evolve
writing output... [ 69%] generated/skbio.stats.evolve.hommola_cospeciation
writing output... [ 69%] generated/skbio.stats.gradient
writing output... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA
writing output... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA.__eq__
writing output... [ 69%] generated/skbio.stats.gradient.AverageGradientANOVA.__ge__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__getstate__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__gt__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__hash__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__le__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__lt__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__ne__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.__str__
writing output... [ 70%] generated/skbio.stats.gradient.AverageGradientANOVA.get_trajectories
writing output... [ 70%] generated/skbio.stats.gradient.CategoryResults
writing output... [ 70%] generated/skbio.stats.gradient.CategoryResults.__eq__
writing output... [ 70%] generated/skbio.stats.gradient.CategoryResults.__ge__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__getstate__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__gt__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__hash__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__le__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__lt__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__ne__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.__str__
writing output... [ 71%] generated/skbio.stats.gradient.CategoryResults.to_files
writing output... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA
writing output... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__eq__
writing output... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__ge__
writing output... [ 71%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__getstate__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__gt__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__hash__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__le__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__lt__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__ne__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.__str__
writing output... [ 72%] generated/skbio.stats.gradient.FirstDifferenceGradientANOVA.get_trajectories
writing output... [ 72%] generated/skbio.stats.gradient.GradientANOVA
writing output... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__eq__
writing output... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__ge__
writing output... [ 72%] generated/skbio.stats.gradient.GradientANOVA.__getstate__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__gt__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__hash__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__le__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__lt__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__ne__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.__str__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVA.get_trajectories
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__eq__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__ge__
writing output... [ 73%] generated/skbio.stats.gradient.GradientANOVAResults.__getstate__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__gt__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__hash__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__le__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__lt__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__ne__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.__str__
writing output... [ 74%] generated/skbio.stats.gradient.GradientANOVAResults.to_files
writing output... [ 74%] generated/skbio.stats.gradient.GroupResults
writing output... [ 74%] generated/skbio.stats.gradient.GroupResults.__eq__
writing output... [ 74%] generated/skbio.stats.gradient.GroupResults.__ge__
writing output... [ 74%] generated/skbio.stats.gradient.GroupResults.__getstate__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__gt__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__hash__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__le__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__lt__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__ne__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.__str__
writing output... [ 75%] generated/skbio.stats.gradient.GroupResults.to_files
writing output... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA
writing output... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__eq__
writing output... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__ge__
writing output... [ 75%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__getstate__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__gt__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__hash__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__le__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__lt__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__ne__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.__str__
writing output... [ 76%] generated/skbio.stats.gradient.TrajectoryGradientANOVA.get_trajectories
writing output... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA
writing output... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__eq__
writing output... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__ge__
writing output... [ 76%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__getstate__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__gt__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__hash__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__le__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__lt__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__ne__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.__str__
writing output... [ 77%] generated/skbio.stats.gradient.WindowDifferenceGradientANOVA.get_trajectories
writing output... [ 77%] generated/skbio.stats.isubsample
writing output... [ 77%] generated/skbio.stats.ordination
writing output... [ 77%] generated/skbio.stats.ordination.OrdinationResults
writing output... [ 77%] generated/skbio.stats.ordination.OrdinationResults.__eq__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__ge__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__getstate__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__gt__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__hash__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__le__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__lt__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__ne__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.__str__
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.plot
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.read
writing output... [ 78%] generated/skbio.stats.ordination.OrdinationResults.rename
writing output... [ 79%] generated/skbio.stats.ordination.OrdinationResults.write
writing output... [ 79%] generated/skbio.stats.ordination.ca
writing output... [ 79%] generated/skbio.stats.ordination.cca
writing output... [ 79%] generated/skbio.stats.ordination.corr
writing output... [ 79%] generated/skbio.stats.ordination.e_matrix
writing output... [ 79%] generated/skbio.stats.ordination.f_matrix
writing output... [ 79%] generated/skbio.stats.ordination.mean_and_std
writing output... [ 79%] generated/skbio.stats.ordination.pcoa
writing output... [ 79%] generated/skbio.stats.ordination.pcoa_biplot
writing output... [ 79%] generated/skbio.stats.ordination.rda
writing output... [ 79%] generated/skbio.stats.ordination.scale
writing output... [ 79%] generated/skbio.stats.ordination.svd_rank
writing output... [ 80%] generated/skbio.stats.power
writing output... [ 80%] generated/skbio.stats.power.confidence_bound
writing output... [ 80%] generated/skbio.stats.power.paired_subsamples
writing output... [ 80%] generated/skbio.stats.power.subsample_paired_power
writing output... [ 80%] generated/skbio.stats.power.subsample_power
writing output... [ 80%] generated/skbio.stats.subsample_counts
writing output... [ 80%] generated/skbio.table.Table
writing output... [ 80%] generated/skbio.table.Table.__eq__
writing output... [ 80%] generated/skbio.table.Table.__ge__
writing output... [ 80%] generated/skbio.table.Table.__getitem__
writing output... [ 80%] generated/skbio.table.Table.__getstate__
writing output... [ 81%] generated/skbio.table.Table.__gt__
writing output... [ 81%] generated/skbio.table.Table.__iter__
writing output... [ 81%] generated/skbio.table.Table.__le__
writing output... [ 81%] generated/skbio.table.Table.__lt__
writing output... [ 81%] generated/skbio.table.Table.__ne__
writing output... [ 81%] generated/skbio.table.Table.__str__
writing output... [ 81%] generated/skbio.table.Table.add_group_metadata
writing output... [ 81%] generated/skbio.table.Table.add_metadata
writing output... [ 81%] generated/skbio.table.Table.align_to
writing output... [ 81%] generated/skbio.table.Table.align_to_dataframe
writing output... [ 81%] generated/skbio.table.Table.align_tree
writing output... [ 82%] generated/skbio.table.Table.collapse
writing output... [ 82%] generated/skbio.table.Table.concat
writing output... [ 82%] generated/skbio.table.Table.copy
writing output... [ 82%] generated/skbio.table.Table.data
writing output... [ 82%] generated/skbio.table.Table.del_metadata
writing output... [ 82%] generated/skbio.table.Table.delimited_self
writing output... [ 82%] generated/skbio.table.Table.descriptive_equality
writing output... [ 82%] generated/skbio.table.Table.exists
writing output... [ 82%] generated/skbio.table.Table.filter
writing output... [ 82%] generated/skbio.table.Table.from_adjacency
writing output... [ 82%] generated/skbio.table.Table.from_hdf5
writing output... [ 83%] generated/skbio.table.Table.from_json
writing output... [ 83%] generated/skbio.table.Table.from_tsv
writing output... [ 83%] generated/skbio.table.Table.get_table_density
writing output... [ 83%] generated/skbio.table.Table.get_value_by_ids
writing output... [ 83%] generated/skbio.table.Table.group_metadata
writing output... [ 83%] generated/skbio.table.Table.head
writing output... [ 83%] generated/skbio.table.Table.ids
writing output... [ 83%] generated/skbio.table.Table.index
writing output... [ 83%] generated/skbio.table.Table.is_empty
writing output... [ 83%] generated/skbio.table.Table.iter
writing output... [ 83%] generated/skbio.table.Table.iter_data
writing output... [ 84%] generated/skbio.table.Table.iter_pairwise
writing output... [ 84%] generated/skbio.table.Table.length
writing output... [ 84%] generated/skbio.table.Table.max
writing output... [ 84%] generated/skbio.table.Table.merge
writing output... [ 84%] generated/skbio.table.Table.metadata
writing output... [ 84%] generated/skbio.table.Table.metadata_to_dataframe
writing output... [ 84%] generated/skbio.table.Table.min
writing output... [ 84%] generated/skbio.table.Table.nonzero
writing output... [ 84%] generated/skbio.table.Table.nonzero_counts
writing output... [ 84%] generated/skbio.table.Table.norm
writing output... [ 84%] generated/skbio.table.Table.pa
writing output... [ 85%] generated/skbio.table.Table.partition
writing output... [ 85%] generated/skbio.table.Table.rankdata
writing output... [ 85%] generated/skbio.table.Table.read
writing output... [ 85%] generated/skbio.table.Table.reduce
writing output... [ 85%] generated/skbio.table.Table.remove_empty
writing output... [ 85%] generated/skbio.table.Table.sort
writing output... [ 85%] generated/skbio.table.Table.sort_order
writing output... [ 85%] generated/skbio.table.Table.subsample
writing output... [ 85%] generated/skbio.table.Table.sum
writing output... [ 85%] generated/skbio.table.Table.to_anndata
writing output... [ 85%] generated/skbio.table.Table.to_dataframe
writing output... [ 86%] generated/skbio.table.Table.to_hdf5
writing output... [ 86%] generated/skbio.table.Table.to_json
writing output... [ 86%] generated/skbio.table.Table.to_tsv
writing output... [ 86%] generated/skbio.table.Table.transform
writing output... [ 86%] generated/skbio.table.Table.transpose
writing output... [ 86%] generated/skbio.table.Table.update_ids
writing output... [ 86%] generated/skbio.table.Table.write
writing output... [ 86%] generated/skbio.table.example_table
writing output... [ 86%] generated/skbio.tree.TreeNode
writing output... [ 86%] generated/skbio.tree.TreeNode.__copy__
writing output... [ 86%] generated/skbio.tree.TreeNode.__deepcopy__
writing output... [ 87%] generated/skbio.tree.TreeNode.__eq__
writing output... [ 87%] generated/skbio.tree.TreeNode.__ge__
writing output... [ 87%] generated/skbio.tree.TreeNode.__getitem__
writing output... [ 87%] generated/skbio.tree.TreeNode.__getstate__
writing output... [ 87%] generated/skbio.tree.TreeNode.__gt__
writing output... [ 87%] generated/skbio.tree.TreeNode.__hash__
writing output... [ 87%] generated/skbio.tree.TreeNode.__iter__
writing output... [ 87%] generated/skbio.tree.TreeNode.__le__
writing output... [ 87%] generated/skbio.tree.TreeNode.__len__
writing output... [ 87%] generated/skbio.tree.TreeNode.__lt__
writing output... [ 87%] generated/skbio.tree.TreeNode.__ne__
writing output... [ 88%] generated/skbio.tree.TreeNode.__str__
writing output... [ 88%] generated/skbio.tree.TreeNode.accumulate_to_ancestor
writing output... [ 88%] generated/skbio.tree.TreeNode.ancestors
writing output... [ 88%] generated/skbio.tree.TreeNode.append
writing output... [ 88%] generated/skbio.tree.TreeNode.ascii_art
writing output... [ 88%] generated/skbio.tree.TreeNode.assign_ids
writing output... [ 88%] generated/skbio.tree.TreeNode.assign_supports
writing output... [ 88%] generated/skbio.tree.TreeNode.bifurcate
writing output... [ 88%] generated/skbio.tree.TreeNode.cache_attr
writing output... [ 88%] generated/skbio.tree.TreeNode.compare_rfd
writing output... [ 88%] generated/skbio.tree.TreeNode.compare_subsets
writing output... [ 88%] generated/skbio.tree.TreeNode.compare_tip_distances
writing output... [ 89%] generated/skbio.tree.TreeNode.copy
writing output... [ 89%] generated/skbio.tree.TreeNode.count
writing output... [ 89%] generated/skbio.tree.TreeNode.create_caches
writing output... [ 89%] generated/skbio.tree.TreeNode.deepcopy
writing output... [ 89%] generated/skbio.tree.TreeNode.descending_branch_length
writing output... [ 89%] generated/skbio.tree.TreeNode.distance
writing output... [ 89%] generated/skbio.tree.TreeNode.extend
writing output... [ 89%] generated/skbio.tree.TreeNode.find
writing output... [ 89%] generated/skbio.tree.TreeNode.find_all
writing output... [ 89%] generated/skbio.tree.TreeNode.find_by_func
writing output... [ 89%] generated/skbio.tree.TreeNode.find_by_id
writing output... [ 90%] generated/skbio.tree.TreeNode.from_linkage_matrix
writing output... [ 90%] generated/skbio.tree.TreeNode.from_taxdump
writing output... [ 90%] generated/skbio.tree.TreeNode.from_taxonomy
writing output... [ 90%] generated/skbio.tree.TreeNode.get_max_distance
writing output... [ 90%] generated/skbio.tree.TreeNode.has_children
writing output... [ 90%] generated/skbio.tree.TreeNode.index_tree
writing output... [ 90%] generated/skbio.tree.TreeNode.insert
writing output... [ 90%] generated/skbio.tree.TreeNode.invalidate_caches
writing output... [ 90%] generated/skbio.tree.TreeNode.is_root
writing output... [ 90%] generated/skbio.tree.TreeNode.is_tip
writing output... [ 90%] generated/skbio.tree.TreeNode.lca
writing output... [ 91%] generated/skbio.tree.TreeNode.levelorder
writing output... [ 91%] generated/skbio.tree.TreeNode.lowest_common_ancestor
writing output... [ 91%] generated/skbio.tree.TreeNode.neighbors
writing output... [ 91%] generated/skbio.tree.TreeNode.non_tips
writing output... [ 91%] generated/skbio.tree.TreeNode.observed_node_counts
writing output... [ 91%] generated/skbio.tree.TreeNode.pop
writing output... [ 91%] generated/skbio.tree.TreeNode.postorder
writing output... [ 91%] generated/skbio.tree.TreeNode.pre_and_postorder
writing output... [ 91%] generated/skbio.tree.TreeNode.preorder
writing output... [ 91%] generated/skbio.tree.TreeNode.prune
writing output... [ 91%] generated/skbio.tree.TreeNode.read
writing output... [ 92%] generated/skbio.tree.TreeNode.remove
writing output... [ 92%] generated/skbio.tree.TreeNode.remove_deleted
writing output... [ 92%] generated/skbio.tree.TreeNode.root
writing output... [ 92%] generated/skbio.tree.TreeNode.root_at
writing output... [ 92%] generated/skbio.tree.TreeNode.root_at_midpoint
writing output... [ 92%] generated/skbio.tree.TreeNode.root_by_outgroup
writing output... [ 92%] generated/skbio.tree.TreeNode.shear
writing output... [ 92%] generated/skbio.tree.TreeNode.shuffle
writing output... [ 92%] generated/skbio.tree.TreeNode.siblings
writing output... [ 92%] generated/skbio.tree.TreeNode.subset
writing output... [ 92%] generated/skbio.tree.TreeNode.subsets
writing output... [ 93%] generated/skbio.tree.TreeNode.subtree
writing output... [ 93%] generated/skbio.tree.TreeNode.tip_tip_distances
writing output... [ 93%] generated/skbio.tree.TreeNode.tips
writing output... [ 93%] generated/skbio.tree.TreeNode.to_array
writing output... [ 93%] generated/skbio.tree.TreeNode.to_taxonomy
writing output... [ 93%] generated/skbio.tree.TreeNode.traverse
writing output... [ 93%] generated/skbio.tree.TreeNode.unpack
writing output... [ 93%] generated/skbio.tree.TreeNode.unpack_by_func
writing output... [ 93%] generated/skbio.tree.TreeNode.unroot
writing output... [ 93%] generated/skbio.tree.TreeNode.unrooted_copy
writing output... [ 93%] generated/skbio.tree.TreeNode.unrooted_deepcopy
writing output... [ 94%] generated/skbio.tree.TreeNode.unrooted_move
writing output... [ 94%] generated/skbio.tree.TreeNode.write
writing output... [ 94%] generated/skbio.tree.majority_rule
writing output... [ 94%] generated/skbio.tree.nj
writing output... [ 94%] generated/skbio.tree.nni
writing output... [ 94%] generated/skbio.util.EfficiencyWarning
writing output... [ 94%] generated/skbio.util.RepresentationWarning
writing output... [ 94%] generated/skbio.util.assert_data_frame_almost_equal
writing output... [ 94%] generated/skbio.util.assert_ordination_results_equal
writing output... [ 94%] generated/skbio.util.cardinal_to_ordinal
writing output... [ 94%] generated/skbio.util.classproperty
writing output... [ 95%] generated/skbio.util.classproperty.__delete__
writing output... [ 95%] generated/skbio.util.classproperty.__eq__
writing output... [ 95%] generated/skbio.util.classproperty.__ge__
writing output... [ 95%] generated/skbio.util.classproperty.__get__
writing output... [ 95%] generated/skbio.util.classproperty.__getstate__
writing output... [ 95%] generated/skbio.util.classproperty.__gt__
writing output... [ 95%] generated/skbio.util.classproperty.__hash__
writing output... [ 95%] generated/skbio.util.classproperty.__le__
writing output... [ 95%] generated/skbio.util.classproperty.__lt__
writing output... [ 95%] generated/skbio.util.classproperty.__ne__
writing output... [ 95%] generated/skbio.util.classproperty.__set__
writing output... [ 96%] generated/skbio.util.classproperty.__set_name__
writing output... [ 96%] generated/skbio.util.classproperty.__str__
writing output... [ 96%] generated/skbio.util.classproperty.deleter
writing output... [ 96%] generated/skbio.util.classproperty.getter
writing output... [ 96%] generated/skbio.util.classproperty.setter
writing output... [ 96%] generated/skbio.util.find_duplicates
writing output... [ 96%] generated/skbio.util.get_data_path
writing output... [ 96%] generated/skbio.util.safe_md5
writing output... [ 96%] generated/skbio.workflow.Workflow
writing output... [ 96%] generated/skbio.workflow.Workflow.__call__
writing output... [ 96%] generated/skbio.workflow.Workflow.__eq__
writing output... [ 96%] generated/skbio.workflow.Workflow.__ge__
writing output... [ 97%] generated/skbio.workflow.Workflow.__getstate__
writing output... [ 97%] generated/skbio.workflow.Workflow.__gt__
writing output... [ 97%] generated/skbio.workflow.Workflow.__hash__
writing output... [ 97%] generated/skbio.workflow.Workflow.__le__
writing output... [ 97%] generated/skbio.workflow.Workflow.__lt__
writing output... [ 97%] generated/skbio.workflow.Workflow.__ne__
writing output... [ 97%] generated/skbio.workflow.Workflow.__str__
writing output... [ 97%] generated/skbio.workflow.Workflow.initialize_state
writing output... [ 97%] generated/skbio.workflow.method
writing output... [ 97%] generated/skbio.workflow.method.__call__
writing output... [ 97%] generated/skbio.workflow.method.__eq__
writing output... [ 98%] generated/skbio.workflow.method.__ge__
writing output... [ 98%] generated/skbio.workflow.method.__getstate__
writing output... [ 98%] generated/skbio.workflow.method.__gt__
writing output... [ 98%] generated/skbio.workflow.method.__hash__
writing output... [ 98%] generated/skbio.workflow.method.__le__
writing output... [ 98%] generated/skbio.workflow.method.__lt__
writing output... [ 98%] generated/skbio.workflow.method.__ne__
writing output... [ 98%] generated/skbio.workflow.method.__str__
writing output... [ 98%] generated/skbio.workflow.requires
writing output... [ 98%] generated/skbio.workflow.requires.__call__
writing output... [ 98%] generated/skbio.workflow.requires.__eq__
writing output... [ 99%] generated/skbio.workflow.requires.__ge__
writing output... [ 99%] generated/skbio.workflow.requires.__getstate__
writing output... [ 99%] generated/skbio.workflow.requires.__gt__
writing output... [ 99%] generated/skbio.workflow.requires.__hash__
writing output... [ 99%] generated/skbio.workflow.requires.__le__
writing output... [ 99%] generated/skbio.workflow.requires.__lt__
writing output... [ 99%] generated/skbio.workflow.requires.__ne__
writing output... [ 99%] generated/skbio.workflow.requires.__str__
writing output... [ 99%] index
writing output... [ 99%] io
writing output... [ 99%] metadata
writing output... [100%] sequence
writing output... [100%] stats
writing output... [100%] table
writing output... [100%] tree
writing output... [100%] util
writing output... [100%] workflow

generating indices... genindex py-modindex done
writing additional pages... search done
copying images... [ 10%] ../build/plot_directive/diversity-1.png
copying images... [ 20%] ../build/plot_directive/diversity-2_00.png
copying images... [ 30%] ../build/plot_directive/diversity-2_01.png
copying images... [ 40%] ../build/plot_directive/diversity-3_00.png
copying images... [ 50%] ../build/plot_directive/diversity-3_01.png
copying images... [ 60%] ../build/plot_directive/diversity-3_02.png
copying images... [ 70%] ../build/plot_directive/generated/skbio-sequence-SubstitutionMatrix-plot-1.png
copying images... [ 80%] ../build/plot_directive/generated/skbio-stats-distance-DissimilarityMatrix-plot-1.png
copying images... [ 90%] ../build/plot_directive/generated/skbio-stats-distance-DistanceMatrix-plot-1.png
copying images... [100%] ../build/plot_directive/generated/skbio-stats-ordination-OrdinationResults-plot-1.png

dumping search index in English (code: en)... done
dumping object inventory... done
Highlighting style a11y-high-contrast-light not found by pygments, falling back to tango.
Highlighting style a11y-high-contrast-dark not found by pygments, falling back to monokai.
build succeeded, 2 warnings.

The HTML pages are in doc/build/html.
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   debian/rules override_dh_auto_test-indep
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
echo No testing for the -doc package
No testing for the -doc package
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   dh_auto_test -O--buildsystem=pybuild -Npython-skbio-doc
I: pybuild base:311: cd /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build; python3.12 -m pytest --pyargs skbio
============================= test session starts ==============================
platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
rootdir: /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build
configfile: pyproject.toml
plugins: typeguard-4.4.1
collected 2793 items

skbio/alignment/tests/test_pairwise.py .........................         [  0%]
skbio/alignment/tests/test_path.py .................                     [  1%]
skbio/alignment/tests/test_ssw.py ...........................            [  2%]
skbio/alignment/tests/test_tabular_msa.py .............................. [  3%]
........................................................................ [  6%]
........................................................................ [  8%]
........................................................................ [ 11%]
........................................................................ [ 13%]
........................................................................ [ 16%]
...........                                                              [ 16%]
skbio/diversity/alpha/tests/test_ace.py ..                               [ 16%]
skbio/diversity/alpha/tests/test_base.py ............................... [ 18%]
                                                                         [ 18%]
skbio/diversity/alpha/tests/test_chao1.py ...                            [ 18%]
skbio/diversity/alpha/tests/test_gini.py ....                            [ 18%]
skbio/diversity/alpha/tests/test_lladser.py ............                 [ 18%]
skbio/diversity/alpha/tests/test_pd.py ................                  [ 19%]
skbio/diversity/beta/tests/test_unifrac.py ............................  [ 20%]
skbio/diversity/tests/test_block.py ...........                          [ 20%]
skbio/diversity/tests/test_driver.py ................................... [ 21%]
..                                                                       [ 21%]
skbio/diversity/tests/test_util.py ................                      [ 22%]
skbio/embedding/tests/test_embedding.py ...................              [ 23%]
skbio/embedding/tests/test_protein.py ..............                     [ 23%]
skbio/io/format/tests/test_base.py ................................      [ 24%]
skbio/io/format/tests/test_binary_dm.py .........                        [ 25%]
skbio/io/format/tests/test_biom.py ...                                   [ 25%]
skbio/io/format/tests/test_blast6.py ...........                         [ 25%]
skbio/io/format/tests/test_blast7.py ..............                      [ 26%]
skbio/io/format/tests/test_clustal.py .............                      [ 26%]
skbio/io/format/tests/test_embed.py ........                             [ 26%]
skbio/io/format/tests/test_embl.py ...............................       [ 28%]
skbio/io/format/tests/test_emptyfile.py ..                               [ 28%]
skbio/io/format/tests/test_fasta.py ................                     [ 28%]
skbio/io/format/tests/test_fastq.py ...............                      [ 29%]
skbio/io/format/tests/test_genbank.py .....................              [ 30%]
skbio/io/format/tests/test_gff3.py ........................              [ 30%]
skbio/io/format/tests/test_lsmat.py .......                              [ 31%]
skbio/io/format/tests/test_newick.py .......                             [ 31%]
skbio/io/format/tests/test_ordination.py .....                           [ 31%]
skbio/io/format/tests/test_phylip.py .......                             [ 31%]
skbio/io/format/tests/test_qseq.py ......                                [ 32%]
skbio/io/format/tests/test_sample_metadata.py ....                       [ 32%]
skbio/io/format/tests/test_sequence_feature_vocabulary.py ....           [ 32%]
skbio/io/format/tests/test_stockholm.py ................................ [ 33%]
...........................................                              [ 34%]
skbio/io/format/tests/test_taxdump.py ......                             [ 35%]
skbio/io/tests/test_iosources.py ..........                              [ 35%]
skbio/io/tests/test_registry.py ........................................ [ 36%]
......................................................                   [ 38%]
skbio/io/tests/test_util.py .........................................sss [ 40%]
sssssssssssssssssssssssssss............................................. [ 43%]
........................................................................ [ 45%]
................................                                         [ 46%]
skbio/metadata/tests/test_enan.py ...                                    [ 46%]
skbio/metadata/tests/test_intersection.py ...............                [ 47%]
skbio/metadata/tests/test_interval.py .................................. [ 48%]
.....................................                                    [ 49%]
skbio/metadata/tests/test_io.py ........................................ [ 51%]
..................................................................       [ 53%]
skbio/metadata/tests/test_metadata.py .................................. [ 54%]
..........................                                               [ 55%]
skbio/metadata/tests/test_metadata_column.py ........................... [ 56%]
..............................................                           [ 58%]
skbio/metadata/tests/test_missing.py ................                    [ 59%]
skbio/metadata/tests/test_mixin.py ..................................... [ 60%]
.............................................................            [ 62%]
skbio/sequence/tests/test_alphabet.py .....                              [ 62%]
skbio/sequence/tests/test_distance.py ..........................         [ 63%]
skbio/sequence/tests/test_dna.py ...                                     [ 63%]
skbio/sequence/tests/test_genetic_code.py ..........................     [ 64%]
skbio/sequence/tests/test_grammared_sequence.py ........................ [ 65%]
.........................                                                [ 66%]
skbio/sequence/tests/test_nucleotide_sequences.py ...................... [ 67%]
.......                                                                  [ 67%]
skbio/sequence/tests/test_protein.py ...........                         [ 67%]
skbio/sequence/tests/test_rna.py ...                                     [ 68%]
skbio/sequence/tests/test_sequence.py .................................. [ 69%]
........................................................................ [ 71%]
........................................................................ [ 74%]
........................................................................ [ 77%]
.............                                                            [ 77%]
skbio/sequence/tests/test_substitution.py ........                       [ 77%]
skbio/stats/distance/tests/test_anosim.py ....                           [ 77%]
skbio/stats/distance/tests/test_base.py ................................ [ 79%]
................................................................         [ 81%]
skbio/stats/distance/tests/test_bioenv.py .................              [ 81%]
skbio/stats/distance/tests/test_mantel.py .............................. [ 83%]
..............                                                           [ 83%]
skbio/stats/distance/tests/test_permanova.py .....                       [ 83%]
skbio/stats/distance/tests/test_permdisp.py ..............               [ 84%]
skbio/stats/evolve/tests/test_hommola.py ............                    [ 84%]
skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py . [ 84%]
.....                                                                    [ 84%]
skbio/stats/ordination/tests/test_correspondence_analysis.py ........    [ 85%]
skbio/stats/ordination/tests/test_ordination_results.py .............    [ 85%]
skbio/stats/ordination/tests/test_principal_coordinate_analysis.py ..... [ 85%]
.......                                                                  [ 86%]
skbio/stats/ordination/tests/test_redundancy_analysis.py ....            [ 86%]
skbio/stats/ordination/tests/test_util.py ..........                     [ 86%]
skbio/stats/tests/test_composition.py .................................. [ 87%]
................................................                         [ 89%]
skbio/stats/tests/test_gradient.py ..........................            [ 90%]
skbio/stats/tests/test_misc.py ...                                       [ 90%]
skbio/stats/tests/test_power.py ........................................ [ 91%]
...                                                                      [ 92%]
skbio/stats/tests/test_subsample.py ............                         [ 92%]
skbio/table/tests/test_base.py .                                         [ 92%]
skbio/tests/test_base.py .....                                           [ 92%]
skbio/tests/test_workflow.py .................                           [ 93%]
skbio/tree/tests/test_majority_rule.py ......                            [ 93%]
skbio/tree/tests/test_nj.py ............................                 [ 94%]
skbio/tree/tests/test_tree.py .......................................... [ 96%]
..............................................................           [ 98%]
skbio/util/tests/test_decorator.py ........                              [ 98%]
skbio/util/tests/test_misc.py ....................                       [ 99%]
skbio/util/tests/test_plotting.py ......                                 [ 99%]
skbio/util/tests/test_testing.py ...............                         [100%]

=============================== warnings summary ===============================
skbio/alignment/tests/test_pairwise.py::PairwiseAlignmentTests::test_compute_score_and_traceback_matrices
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:56: DeprecationWarning: make_identity_substitution_matrix is deprecated as of 0.4.0. It has been replaced by the SubstitutionMatrix class. Additional details at https://github.com/scikit-bio/scikit-bio/pull/1913.
    warn(

skbio/alignment/tests/test_ssw.py::TestAlignStripedSmithWaterman::test_invalid_type
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:56: DeprecationWarning: local_pairwise_align_ssw is deprecated as of 0.5.8. It will be removed in favor of more general purpose and performant aligners. Additional details at https://github.com/scikit-bio/scikit-bio/issues/1814.
    warn(

skbio/alignment/tests/test_tabular_msa.py::TestGapFrequencies::test_no_positions_relative
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_tabular_msa.py:1648: RuntimeWarning: invalid value encountered in divide
    gap_freqs /= length

skbio/diversity/tests/test_block.py::ParallelBetaDiversity::test_block_beta_diversity
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:56: DeprecationWarning: partial_beta_diversity is deprecated as of 0.5.0. The return type is unstable. Developer caution is advised. The resulting DistanceMatrix object will include zeros when distance has not been calculated, and therefore can be misleading.
    warn(

skbio/metadata/tests/test_io.py: 10 warnings
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/io.py:411: FutureWarning: Downcasting behavior in `replace` is deprecated and will be removed in a future version. To retain the old behavior, explicitly call `result.infer_objects(copy=False)`. To opt-in to the future behavior, set `pd.set_option('future.no_silent_downcasting', True)`
    series = series.replace("", np.nan)

skbio/metadata/tests/test_io.py::TestSave::test_numeric_metadata_column_insdc_missing
skbio/metadata/tests/test_metadata_column.py::TestToSeries::test_encode_missing_true
skbio/metadata/tests/test_metadata_column.py::TestToDataframe::test_encode_missing_true
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_metadata.py:1102: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise an error in a future version of pandas. Value '['missing']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
    series[missing.index] = missing

skbio/metadata/tests/test_missing.py::TestISNDC::test_roundtrip_all_missing_object
skbio/metadata/tests/test_missing.py::TestOmitted::test_roundtrip_all_missing_object
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_missing.py:53: FutureWarning: Mismatched null-like values nan and None found. In a future version, pandas equality-testing functions (e.g. assert_frame_equal) will consider these not-matching and raise.
    pdt.assert_series_equal(missing, series.astype(object))

skbio/metadata/tests/test_missing.py::TestOmitted::test_roundtrip_bool
skbio/metadata/tests/test_missing.py::TestOmitted::test_roundtrip_string
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_missing.py:31: FutureWarning: Mismatched null-like values nan and None found. In a future version, pandas equality-testing functions (e.g. assert_frame_equal) will consider these not-matching and raise.
    pdt.assert_series_equal(missing, series[1:].astype(object))

skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_grammared_sequence.py:639: DeprecationWarning: has_nondegenerates is deprecated as of 0.5.0
    warn("has_nondegenerates is deprecated as of 0.5.0", DeprecationWarning)

skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars
skbio/sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars
skbio/sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars
skbio/sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars
skbio/sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars
skbio/sequence/tests/test_protein.py::TestProtein::test_nondegenerate_chars
skbio/sequence/tests/test_protein.py::TestProtein::test_nondegenerate_chars
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_grammared_sequence.py:313: DeprecationWarning: nondegenerate_chars is deprecated as of 0.5.0
    warn("nondegenerate_chars is deprecated as of 0.5.0", DeprecationWarning)

skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
skbio/sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_grammared_sequence.py:572: DeprecationWarning: nondenengerates is deprecated as of 0.5.0.
    warn("nondenengerates is deprecated as of 0.5.0.", DeprecationWarning)

skbio/sequence/tests/test_sequence.py::TestSequence::test_frequencies_empty_sequence
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_sequence.py:1824: RuntimeWarning: invalid value encountered in divide
    obs_counts = obs_counts / len(self)

skbio/stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_pearson
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_mantel.py:364: ConstantInputWarning: All values in data are exactly equal; results may not be reliable.
    warnings.warn(ConstantInputWarning())

skbio/stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_spearman
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_mantel.py:483: ConstantInputWarning: All values in data are exactly equal; results may not be reliable.
    warnings.warn(ConstantInputWarning())

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_call_via_series
skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_call_via_series
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.006573677549550485 and the largest is 0.17668321589384078.
    warn(

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_eq_groups
skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_no_permuations
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -13.54184654426961 and the largest is 16.5872013747859.
    warn(

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_mixedgroups
skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_uneq_groups
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -15.629533932395208 and the largest is 20.90315427793891.
    warn(

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:190: RuntimeWarning: invalid value encountered in divide
    proportion_explained = eigvals / sum_eigenvalues

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null
  /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:563: ConstantInputWarning: Each of the input arrays is constant; the F statistic is not defined or infinite
    res = hypotest_fun_out(*samples, axis=axis, **kwds)

skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results
skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.007758325147780521 and the largest is 2.7077929489469237.
    warn(

skbio/stats/ordination/tests/test_redundancy_analysis.py::TestRDAErrors::test_shape
  /usr/lib/python3.12/unittest/case.py:690: DeprecationWarning: It is deprecated to return a value that is not None from a test case (<bound method TestRDAErrors.test_shape of <skbio.stats.ordination.tests.test_redundancy_analysis.TestRDAErrors testMethod=test_shape>>)
    return self.run(*args, **kwds)

skbio/stats/tests/test_composition.py::CompositionTests::test_multiplicative_replacement
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:60: UserWarning: multiplicative_replacement is deprecated as of 0.6.0.
    warn(f"{func.__name__} is deprecated as of {ver}.")

skbio/stats/tests/test_composition.py::AncomTests::test_ancom_alternative_test
  /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:531: RuntimeWarning: Precision loss occurred in moment calculation due to catastrophic cancellation. This occurs when the data are nearly identical. Results may be unreliable.
    res = hypotest_fun_out(*samples, **kwds)

skbio/stats/tests/test_composition.py::AncomTests::test_ancom_multiple_comparisons_deprecated
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:60: UserWarning: ancom is deprecated as of 0.6.0.
    warn(f"{func.__name__} is deprecated as of {ver}.")

skbio/stats/tests/test_composition.py::AncomTests::test_ancom_no_signal
  /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:531: ConstantInputWarning: Each of the input arrays is constant; the F statistic is not defined or infinite
    res = hypotest_fun_out(*samples, **kwds)

skbio/stats/tests/test_composition.py::VLRTests::test_pairwise_vlr
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/composition.py:947: RuntimeWarning: divide by zero encountered in log
    X_log = np.log(mat)

skbio/stats/tests/test_composition.py::VLRTests::test_pairwise_vlr
  /usr/lib/python3/dist-packages/numpy/lib/function_base.py:2742: RuntimeWarning: invalid value encountered in subtract
    X -= avg[:, None]

skbio/stats/tests/test_composition.py::VLRTests::test_vlr
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/composition.py:831: RuntimeWarning: divide by zero encountered in log
    x = np.log(x)

skbio/stats/tests/test_composition.py::VLRTests::test_vlr
  /usr/lib/python3/dist-packages/numpy/core/_methods.py:173: RuntimeWarning: invalid value encountered in subtract
    x = asanyarray(arr - arrmean)

skbio/stats/tests/test_gradient.py::GradientTests::test_weight_by_vector
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/gradient.py:167: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise an error in a future version of pandas. Value '6.357142857142857' has dtype incompatible with int64, please explicitly cast to a compatible dtype first.
    trajectories.loc[idx] = (

skbio/tree/tests/test_tree.py::TreeTests::test_root_at
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_tree.py:1327: FutureWarning: The default behavior of `root_at` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `reset=True, branch_attrs=[], root_name=None`.
    warn(

skbio/tree/tests/test_tree.py::TreeTests::test_root_at
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_tree.py:776: FutureWarning: The default behavior of `unrooted_copy` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `branch_attrs={"length", "support"}, root_name=None`.
    warn(

skbio/tree/tests/test_tree.py::TreeTests::test_root_at_midpoint
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_tree.py:1472: FutureWarning: The default behavior of `root_at_midpoint` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `reset=True, branch_attrs=[], root_name=None`.
    warn(

skbio/tree/tests/test_tree.py::TreeTests::test_unrooted_deepcopy
  /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py:56: DeprecationWarning: unrooted_deepcopy is deprecated as of 0.6.2. Use unrooted_copy instead.
    warn(

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
========== 2763 passed, 30 skipped, 70 warnings in 2782.20s (0:46:22) ==========
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=pybuild
   dh_prep -O--buildsystem=pybuild
   dh_auto_install -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/metadata/_intersection.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/ordination/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/alignment/_ssw_wrapper.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/diversity/_phylogenetic.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-skbio-0.6.2/skbio/stats/distance/_cutils.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
[1/5] Cythonizing skbio/metadata/_intersection.pyx
[2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
[3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
[4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
[5/5] Cythonizing skbio/stats/distance/_cutils.pyx
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running build_ext
building 'skbio.metadata._intersection' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/metadata/_intersection.c -o build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_intersection.cpython-312-x86_64-linux-gnu.so
building 'skbio.alignment._ssw_wrapper' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/alignment/_ssw_wrapper.c:1273:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_ssw_wrapper.cpython-312-x86_64-linux-gnu.so
building 'skbio.diversity._phylogenetic' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/diversity/_phylogenetic.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_phylogenetic.cpython-312-x86_64-linux-gnu.so
building 'skbio.stats.ordination._cutils' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
building 'skbio.stats.distance._cutils' extension
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c skbio/stats/distance/_cutils.c -o build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from skbio/stats/distance/_cutils.c:1249:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-skbio-0.6.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/python-skbio-0.6.2 build/temp.linux-x86_64-cpython-312/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_cutils.cpython-312-x86_64-linux-gnu.so -fopenmp
running install_lib
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/.pytest_cache/.gitignore -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/.pytest_cache/README.md -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache/v
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/registry.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/_iosources.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/registry.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/_fileobject.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/util.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/_warning.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__pycache__/_exception.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/_iosources.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/__pycache__/test_util.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/__pycache__/test_iosources.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/__pycache__/test_registry.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/test_registry.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/test_iosources.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/big5_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/real_file_2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/big5_file.gz -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/example_file.gz -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/example_file.bz2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/real_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/big5_file.bz2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/tests/data/example_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/_fileobject.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/util.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/_warning.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/phylip.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/stockholm.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/_base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/_blast.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/clustal.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/fastq.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/emptyfile.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/gff3.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/binary_dm.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/biom.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/blast7.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/newick.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/stockholm.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/sample_metadata.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/taxdump.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/ordination.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/lsmat.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/embl.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/phylip.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/blast6.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/qseq.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/fasta.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/_sequence_feature_vocabulary.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/embed.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__pycache__/genbank.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/lsmat.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/blast6.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/embl.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/_sequence_feature_vocabulary.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/embed.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/_blast.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/genbank.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/gff3.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/fastq.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/taxdump.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_taxdump.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_newick.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_clustal.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_embed.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_sequence_feature_vocabulary.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_binary_dm.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_taxdump.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_lsmat.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_blast6.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_genbank.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_blast7.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_stockholm.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_base.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_fasta.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_emptyfile.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_qseq.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_sample_metadata.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_fastq.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_phylip.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_ordination.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_gff3.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_embl.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__pycache__/test_biom.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_emptyfile.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_blast6.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_fasta.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_biom.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_embl.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_clustal.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_gff3.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_qseq.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_lsmat.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_blast7.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_stockholm.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_genbank.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_fastq.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/gff3_bad_missing_directive -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_long_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_seq_sanger -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_diff_ids.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_dna_3_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_no_data -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_custom_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_constructed -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_multi_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/prot.emb -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_read -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error19 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_invalid_type_in_column -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_tabular_msa_different_type -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error20 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_header_too_long -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embed2.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_del.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_variable_length_ids -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_no_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_different_padding -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error22 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_tile -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_x -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_malformed_data_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/tsv_8_fields -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_whitespace_only_lines -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_in_title.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_single_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_single_tree_without_id -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_custom_multi_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_single_seq_sanger -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embed1.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/tsv_10_fields -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_custom_minimal -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_single_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error21 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/longreads_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_legacy_format -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gs_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_single_record_upper -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_single_seq_long -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error12 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_double_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_missing_reference_items -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_feature_level_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-comments.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error7 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_single_record_upper -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_2_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_lane -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_escape.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_y -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_missing_locus_name -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_no_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error18 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_blank_lines -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_custom_single_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error23 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multiple_trees -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_uniprot_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error8 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error6 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/prot_vec.emb -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_extensive_mixed -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_single_record_lower -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error5 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_custom_single_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_invalid_data_type -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_blank_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_default_single_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_nonstring_labels -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_example3_scores -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_missing_rn_tag -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/gff3_bad_wrong_columns -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_extensive -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_no_data -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_missing_footer -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error3 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error13 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gc_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_invalid_column_types -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gr_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/taxdump_names.dmp -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_legacy_format -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_spaces.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/whitespace_only -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/empty -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_single_reference -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_differing_fields -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_data_only -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_max_width_1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_w_beginning_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error14 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error10 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_blanks_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_all_data_types -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_default_multi_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_blank_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_blanks_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_ws_lines_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/longreads_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error17 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_10_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_gr -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_multi_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_custom_minimal -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_gibberish -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_tab.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_null.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_blank_lines -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_single_record_lower -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multiple_references -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_example2_scores -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_header_too_short -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_references_mixed -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error16 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error24 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_default_multi_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error4 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gf_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_mixed_qual_scores -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_and_blast7_default -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_single_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_metadata_only -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/gff3_dna -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_gc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_single_tree_with_id -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_custom_multi_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qseq_invalid_filter -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_single_record_simple -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_rna -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_two_chunks -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_tabs.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_multi_seq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_short_qual.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_vtab.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_between_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_max_width_5 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_3_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/gff3_multi_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_qual_space.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/gff3_single_record -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error15 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_max_width_5 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_missing_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast6_custom_mixed_nans -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/legacy9_multi_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_max_width_1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_runon_references -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/blast7_default_single_line -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_single_seq_short -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/longreads_original_sanger.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/error_double_seq.fastq -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_minimal -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/embl_multi_records -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error11 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/taxdump_nodes.dmp -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/stockholm_multiple_msa -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/ordination_error9 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_binary_dm.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_embed.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_newick.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_ordination.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_phylip.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/tests/test_sample_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/biom.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/emptyfile.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/clustal.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/fasta.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/binary_dm.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/newick.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/sample_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/blast7.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/ordination.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/io/format/qseq.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__pycache__/_majority_rule.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__pycache__/_nj.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__pycache__/_exception.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__pycache__/_tree.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_majority_rule.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_nj.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/__pycache__/test_tree.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/__pycache__/test_nj.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/__pycache__/test_majority_rule.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/test_tree.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/test_majority_rule.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/tests/test_nj.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tree/_tree.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/__pycache__/_base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/__pycache__/workflow.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/workflow.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/_pairwise.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/_indexing.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/_path.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/_tabular_msa.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__pycache__/_repr.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_ssw_wrapper.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_pairwise.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_path.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__pycache__/test_ssw.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__pycache__/test_pairwise.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__pycache__/test_tabular_msa.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__pycache__/test_path.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/test_path.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/test_tabular_msa.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/test_ssw.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/tests/test_pairwise.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_lib
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_lib/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_lib
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_tabular_msa.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/alignment/_indexing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/_misc.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/_subsample.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/power.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/composition.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__pycache__/gradient.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/_subsample.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/__pycache__/_hommola.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests/__pycache__/test_hommola.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests/test_hommola.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/evolve/_hommola.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_canonical_correspondence_analysis.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_correspondence_analysis.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_utils.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_redundancy_analysis.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_ordination_results.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__pycache__/_principal_coordinate_analysis.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_cutils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_ordination_results.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_utils.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_util.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_principal_coordinate_analysis.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_redundancy_analysis.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_ordination_results.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_correspondence_analysis.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__pycache__/test_canonical_correspondence_analysis.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_redundancy_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_Y -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_skbio -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_X -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_X -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/L&L_CA_data -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_Y -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/varechem.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/varespec.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_canonical_correspondence_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/ordination/_redundancy_analysis.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_permdisp.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_utils.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_bioenv.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_anosim.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_permanova.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__pycache__/_mantel.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_cutils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_permdisp.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_anosim.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_utils.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_anosim.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_permanova.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_permdisp.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_mantel.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_base.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_bioenv.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__pycache__/test_anosim.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_permanova.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_mantel.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_bioenv.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/test_permdisp.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/dm_reordered.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/exp_results.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/df_extra_column.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/dm4.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/dm2.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/dm.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/frameSeries_dm.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/df.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/dm3.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/exp_results_single_column.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_permanova.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_mantel.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/distance/_bioenv.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/power.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/composition.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/test_composition.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/test_subsample.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/test_power.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/test_misc.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__pycache__/test_gradient.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/test_misc.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/test_subsample.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/test_power.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/test_gradient.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/cr_no_data_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/gr_w_msg_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/vr_real_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/gr_wo_msg_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/cr_data_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/vr_real_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/cr_no_data_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/gr_w_msg_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/cr_data_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/vr_out -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/vr_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/data/gr_wo_msg_raw -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/tests/test_composition.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/_misc.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/stats/gradient.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/__pycache__/test_workflow.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/__pycache__/test_base.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/tests/test_workflow.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/__pycache__/_protein.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/__pycache__/_embedding.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/_embedding.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/__pycache__/test_embedding.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/__pycache__/test_protein.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/test_embedding.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/data/embed1.txt.npy -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/data
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/tests/test_protein.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/embedding/_protein.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_decorator.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_decorator.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_misc.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_warning.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_exception.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_plotting.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__pycache__/_testing.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_plotting.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_exception.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__pycache__/test_decorator.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__pycache__/test_testing.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__pycache__/test_misc.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__pycache__/test_plotting.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/test_misc.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/test_testing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/test_plotting.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/tests/test_decorator.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_testing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_misc.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/util/_warning.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_util.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/__pycache__/_driver.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/__pycache__/_block.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/__pycache__/_util.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_driver.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_lladser.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_chao1.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_gini.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_ace.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__pycache__/_pd.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_chao1.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_gini.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_lladser.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_pd.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_base.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_ace.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_lladser.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_gini.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_chao1.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_gini.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_chao1.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_ace.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/tests/test_pd.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_pd.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_lladser.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/alpha/_ace.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_phylogenetic.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/__pycache__/test_util.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/__pycache__/test_driver.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/__pycache__/test_block.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/test_block.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/test_util.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/test_driver.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/__pycache__/_unifrac.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/_unifrac.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/__pycache__/test_unifrac.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/beta/tests/test_unifrac.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/diversity/_block.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/test.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/__pycache__/_base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests/__pycache__/test_base.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests/test_base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/table/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/base.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_enan.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_interval.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/missing.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_metadata.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_testing.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_repr.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/_mixin.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__pycache__/io.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/base.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_enan.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/missing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_enan.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_interval.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_enan.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_missing.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_metadata_column.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_intersection.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_interval.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_mixin.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_metadata.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__pycache__/test_io.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_metadata_column.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_missing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_io.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/test_intersection.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/empty-column-name.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/empty-file -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/invalid-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/empty-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/header-only.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/directive-before-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/non-utf-8.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/invalid
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/non-standard-characters.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/minimal.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/empty-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/simple-with-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/comments.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/missing-data.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/partial-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/simple.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/windows-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/jagged.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/missing-insdc.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/single-column.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/override-insdc.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/mac-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/simple.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/trailing-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/numeric-column.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/column-order.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/empty-rows.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/no-columns.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/all-cells-padded.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/unix-line-endings.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/recommended-ids.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/complete-types-directive.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/qiime1.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/BOM-simple.txt -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/tests/data/valid/single-id.tsv -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/data/valid
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_testing.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_intersection.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/io.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_interval.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/metadata/_metadata.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_grammared_sequence.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_protein.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_sequence.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_alphabet.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_rna.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_genetic_code.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/distance.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_dna.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_nucleotide_mixin.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_substitution.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__pycache__/_repr.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_substitution.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_repr.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_nucleotide_mixin.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
creating /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_substitution.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_nucleotide_sequences.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_grammared_sequence.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_alphabet.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_rna.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_distance.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_dna.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_genetic_code.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_protein.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__pycache__/test_sequence.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__pycache__
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_distance.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_dna.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_nucleotide_sequences.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/__init__.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_substitution.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_alphabet.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_genetic_code.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_grammared_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_protein.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/tests/test_rna.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_alphabet.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_dna.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_grammared_sequence.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/distance.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_rna.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_protein.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
copying /build/reproducible-path/python-skbio-0.6.2/.pybuild/cpython3_3.12_skbio/build/skbio/sequence/_genetic_code.py -> /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/registry.py to registry.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/_iosources.py to _iosources.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/_exception.py to _exception.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/test_util.py to test_util.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/test_registry.py to test_registry.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/tests/test_iosources.py to test_iosources.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/_fileobject.py to _fileobject.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/util.py to util.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/_warning.py to _warning.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/phylip.py to phylip.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/stockholm.py to stockholm.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/lsmat.py to lsmat.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/blast6.py to blast6.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/embl.py to embl.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/_sequence_feature_vocabulary.py to _sequence_feature_vocabulary.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/embed.py to embed.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/_base.py to _base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/_blast.py to _blast.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/genbank.py to genbank.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/gff3.py to gff3.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/fastq.py to fastq.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/taxdump.py to taxdump.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_taxdump.py to test_taxdump.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_emptyfile.py to test_emptyfile.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_blast6.py to test_blast6.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_base.py to test_base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_fasta.py to test_fasta.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_biom.py to test_biom.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_embl.py to test_embl.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_clustal.py to test_clustal.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_gff3.py to test_gff3.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_qseq.py to test_qseq.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_lsmat.py to test_lsmat.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_blast7.py to test_blast7.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_sequence_feature_vocabulary.py to test_sequence_feature_vocabulary.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_stockholm.py to test_stockholm.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_genbank.py to test_genbank.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_fastq.py to test_fastq.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_binary_dm.py to test_binary_dm.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_embed.py to test_embed.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_newick.py to test_newick.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_ordination.py to test_ordination.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_phylip.py to test_phylip.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/tests/test_sample_metadata.py to test_sample_metadata.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/biom.py to biom.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/emptyfile.py to emptyfile.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/clustal.py to clustal.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/fasta.py to fasta.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/binary_dm.py to binary_dm.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/newick.py to newick.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/sample_metadata.py to sample_metadata.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/blast7.py to blast7.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/ordination.py to ordination.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/io/format/qseq.py to qseq.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/_majority_rule.py to _majority_rule.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/_nj.py to _nj.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/_exception.py to _exception.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/test_tree.py to test_tree.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/test_majority_rule.py to test_majority_rule.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/tests/test_nj.py to test_nj.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tree/_tree.py to _tree.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/workflow.py to workflow.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/_base.py to _base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_repr.py to _repr.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_pairwise.py to _pairwise.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_path.py to _path.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/test_path.py to test_path.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/test_tabular_msa.py to test_tabular_msa.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/test_ssw.py to test_ssw.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/tests/test_pairwise.py to test_pairwise.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_lib/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_tabular_msa.py to _tabular_msa.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/alignment/_indexing.py to _indexing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/_subsample.py to _subsample.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests/test_hommola.py to test_hommola.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/evolve/_hommola.py to _hommola.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_ordination_results.py to _ordination_results.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_utils.py to _utils.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py to test_principal_coordinate_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_correspondence_analysis.py to test_correspondence_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_util.py to test_util.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_ordination_results.py to test_ordination_results.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_redundancy_analysis.py to test_redundancy_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py to test_canonical_correspondence_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_correspondence_analysis.py to _correspondence_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_canonical_correspondence_analysis.py to _canonical_correspondence_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py to _principal_coordinate_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/ordination/_redundancy_analysis.py to _redundancy_analysis.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_base.py to _base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_permdisp.py to _permdisp.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_anosim.py to _anosim.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_utils.py to _utils.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_anosim.py to test_anosim.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_base.py to test_base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_permanova.py to test_permanova.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_mantel.py to test_mantel.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_bioenv.py to test_bioenv.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/tests/test_permdisp.py to test_permdisp.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_permanova.py to _permanova.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_mantel.py to _mantel.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/distance/_bioenv.py to _bioenv.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/power.py to power.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/composition.py to composition.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/test_misc.py to test_misc.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/test_subsample.py to test_subsample.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/test_power.py to test_power.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/test_gradient.py to test_gradient.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/tests/test_composition.py to test_composition.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/_misc.py to _misc.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/stats/gradient.py to gradient.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/test_base.py to test_base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/tests/test_workflow.py to test_workflow.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/_embedding.py to _embedding.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/test_embedding.py to test_embedding.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/tests/test_protein.py to test_protein.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/embedding/_protein.py to _protein.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_decorator.py to _decorator.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_plotting.py to _plotting.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_exception.py to _exception.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/test_misc.py to test_misc.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/test_testing.py to test_testing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/test_plotting.py to test_plotting.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/tests/test_decorator.py to test_decorator.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_testing.py to _testing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_misc.py to _misc.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/util/_warning.py to _warning.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/_util.py to _util.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/_driver.py to _driver.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_chao1.py to _chao1.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_base.py to _base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_gini.py to _gini.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_lladser.py to test_lladser.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_base.py to test_base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_gini.py to test_gini.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_chao1.py to test_chao1.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_ace.py to test_ace.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/tests/test_pd.py to test_pd.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_pd.py to _pd.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_lladser.py to _lladser.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/alpha/_ace.py to _ace.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/test_block.py to test_block.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/test_util.py to test_util.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/test_driver.py to test_driver.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/_unifrac.py to _unifrac.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/beta/tests/test_unifrac.py to test_unifrac.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/diversity/_block.py to _block.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/test.py to test.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/_base.py to _base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests/test_base.py to test_base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/table/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_repr.py to _repr.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/base.py to base.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_enan.py to _enan.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/missing.py to missing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_enan.py to test_enan.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_interval.py to test_interval.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_metadata_column.py to test_metadata_column.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_missing.py to test_missing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_io.py to test_io.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_mixin.py to test_mixin.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_metadata.py to test_metadata.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/tests/test_intersection.py to test_intersection.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_testing.py to _testing.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/io.py to io.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_interval.py to _interval.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_mixin.py to _mixin.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/metadata/_metadata.py to _metadata.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_sequence.py to _sequence.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_substitution.py to _substitution.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_repr.py to _repr.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_nucleotide_mixin.py to _nucleotide_mixin.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_distance.py to test_distance.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_dna.py to test_dna.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_nucleotide_sequences.py to test_nucleotide_sequences.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_substitution.py to test_substitution.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_alphabet.py to test_alphabet.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_genetic_code.py to test_genetic_code.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_grammared_sequence.py to test_grammared_sequence.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_protein.py to test_protein.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_sequence.py to test_sequence.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/tests/test_rna.py to test_rna.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_alphabet.py to _alphabet.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_dna.py to _dna.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_grammared_sequence.py to _grammared_sequence.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/distance.py to distance.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_rna.py to _rna.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_protein.py to _protein.cpython-312.pyc
byte-compiling /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/skbio/sequence/_genetic_code.py to _genetic_code.cpython-312.pyc
running install_egg_info
running egg_info
creating scikit_bio.egg-info
writing scikit_bio.egg-info/PKG-INFO
writing dependency_links to scikit_bio.egg-info/dependency_links.txt
writing requirements to scikit_bio.egg-info/requires.txt
writing top-level names to scikit_bio.egg-info/top_level.txt
writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'simde-sse2.h'
no previously-included directories found matching 'web/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
warning: no previously-included files matching '.coverage' found anywhere in distribution
adding license file 'LICENSE.txt'
writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
Copying scikit_bio.egg-info to /build/reproducible-path/python-skbio-0.6.2/debian/python3-skbio/usr/lib/python3.12/dist-packages/scikit_bio-0.6.2.egg-info
Skipping SOURCES.txt
running install_scripts
   dh_install -O--buildsystem=pybuild
   debian/rules execute_after_dh_install
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
dh_numpy3
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   dh_installdocs -O--buildsystem=pybuild
   debian/rules override_dh_sphinxdoc
make[1]: Entering directory '/build/reproducible-path/python-skbio-0.6.2'
dh_link --package=python-skbio-doc \
	/usr/share/javascript/mathjax/MathJax.js \
	/usr/share/doc/python-skbio-doc/html/_static/MathJax.js
dh_sphinxdoc --package=python-skbio-doc
dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/MathJax.js
dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/copybutton.js
dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/design-tabs.js
dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/clipboard.min.js
dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/copybutton_funcs.js
make[1]: Leaving directory '/build/reproducible-path/python-skbio-0.6.2'
   dh_installchangelogs -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
   dh_installsystemduser -O--buildsystem=pybuild
   dh_lintian -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   dh_compress -O--buildsystem=pybuild
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
dpkg-gencontrol: warning: package python-skbio-doc: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'python3-skbio-dbgsym' in '../python3-skbio-dbgsym_0.6.2-3_amd64.deb'.
dpkg-deb: building package 'python3-skbio' in '../python3-skbio_0.6.2-3_amd64.deb'.
dpkg-deb: building package 'python-skbio-doc' in '../python-skbio-doc_0.6.2-3_all.deb'.
 dpkg-genbuildinfo --build=binary -O../python-skbio_0.6.2-3_amd64.buildinfo
 dpkg-genchanges --build=binary -O../python-skbio_0.6.2-3_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/2066760 and its subdirectories
I: Current time: Tue Nov 12 01:50:47 -12 2024
I: pbuilder-time-stamp: 1731419447