I: pbuilder: network access will be disabled during build I: Current time: Mon Jan 19 10:25:45 +14 2026 I: pbuilder-time-stamp: 1768767945 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pyobjcryst_2024.2.1-1.dsc] I: copying [./pyobjcryst_2024.2.1.orig.tar.gz] I: copying [./pyobjcryst_2024.2.1-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 25 14:08:03 2024 gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB gpgv: issuer "picca@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pyobjcryst_2024.2.1-1.dsc: no acceptable signature found dpkg-source: info: extracting pyobjcryst in pyobjcryst-2024.2.1 dpkg-source: info: unpacking pyobjcryst_2024.2.1.orig.tar.gz dpkg-source: info: unpacking pyobjcryst_2024.2.1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying avoid_gitarchive.patch dpkg-source: info: applying install-layout-deb.patch dpkg-source: info: applying build-pyversion.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/745313/tmp/hooks/D01_modify_environment starting debug: Running on ionos5-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 18 20:26 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/745313/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/745313/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=9be2e8b578954766831c63e6ca1fcf89 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=745313 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TBIKoEkB/pbuilderrc_MnAf --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TBIKoEkB/b2 --logfile b2/build.log pyobjcryst_2024.2.1-1.dsc' SUDO_GID=110 SUDO_UID=105 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/745313/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-pkg-resources, python3-all, python3-numpy, scons, python3-all-dev, libboost-all-dev, libobjcryst-dev (>= 2022.1.4) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on scons; however: Package scons is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libobjcryst-dev (>= 2022.1.4); however: Package libobjcryst-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libann-cctbx0{a} libarchive-zip-perl{a} libblas3{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libbrotli1{a} libcbf1t64{a} libcbor0.10{a} libccp4-data{a} libccp4c0t64{a} libcctbx0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-310{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.5-0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnewmat10ldbl{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libobjcryst-dev{a} libobjcryst0{a} libopenmpi-dev{a} libopenmpi40{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2t64{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libucx0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} po-debconf{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-setuptools{a} python3-snowballstemmer{a} python3-sphinx{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} scons{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libsasl2-modules lynx publicsuffix python3-pil wget xauth 0 packages upgraded, 300 newly installed, 0 to remove and 0 not upgraded. Need to get 205 MB of archives. After unpacking 1097 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.8-3 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.8-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.8-3 [1969 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.8-3 [677 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-2 [858 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-2 [2198 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-3 [200 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-6 [1184 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-3 [723 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 53 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-3 [1600 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 67 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get: 78 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 89 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libann-cctbx0 amd64 1.1.2+doc-9+b1 [32.4 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-4 [10.6 MB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-4 [234 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-4 [235 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libboost-atomic-dev amd64 1.83.0.2+b2 [3904 B] Get: 101 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-4 [240 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-4 [245 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83.0 amd64 1.83.0-4 [259 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83-dev amd64 1.83.0-4 [264 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libboost-container-dev amd64 1.83.0.2+b2 [4072 B] Get: 107 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-4 [230 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-4 [333 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-4 [373 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-4 [239 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-4 [230 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-4 [231 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-4 [269 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-4 [276 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83.0 amd64 1.83.0-4 [231 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83-dev amd64 1.83.0-4 [233 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libboost-context-dev amd64 1.83.0.2+b2 [3804 B] Get: 118 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83.0 amd64 1.83.0-4 [234 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83-dev amd64 1.83.0-4 [236 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine-dev amd64 1.83.0.2+b2 [3868 B] Get: 121 http://deb.debian.org/debian unstable/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B] Get: 122 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 123 http://deb.debian.org/debian unstable/main amd64 libboost-exception1.83-dev amd64 1.83.0-4 [230 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libboost-exception-dev amd64 1.83.0.2+b2 [3584 B] Get: 125 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-4 [282 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-4 [298 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83.0 amd64 1.83.0-4 [254 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83-dev amd64 1.83.0-4 [265 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libboost-fiber-dev amd64 1.83.0.2+b2 [4028 B] Get: 130 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 131 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83.0 amd64 1.83.0-4 [359 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-4 [330 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-4 [346 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83.0 amd64 1.83.0-4 [471 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83-dev amd64 1.83.0-4 [541 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83-dev amd64 1.83.0-4 [383 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libboost-graph-dev amd64 1.83.0.2+b2 [3700 B] Get: 139 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.4-1 [661 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.6-3 [2360 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-4 [271 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83.0 amd64 1.83.0-4 [280 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83-dev amd64 1.83.0-4 [284 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel-dev amd64 1.83.0.2+b2 [3728 B] Get: 166 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-4 [261 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 168 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83.0 amd64 1.83.0-4 [356 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83-dev amd64 1.83.0-4 [373 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libboost-json-dev amd64 1.83.0.2+b2 [3704 B] Get: 171 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83.0 amd64 1.83.0-4 [473 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83-dev amd64 1.83.0-4 [555 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libboost-locale-dev amd64 1.83.0.2+b2 [3924 B] Get: 174 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83.0 amd64 1.83.0-4 [708 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83-dev amd64 1.83.0-4 [879 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libboost-log-dev amd64 1.83.0.2+b2 [3796 B] Get: 177 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-4 [523 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-4 [571 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 180 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.6-3 [97.0 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-2 [30.3 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.1.3-2 [616 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.16.0-1 [5696 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.16.0-1 [114 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 205 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1.1 [120 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 210 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.2.3-4 [112 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-2 [468 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.4-1 [3972 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.6-3 [188 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.6-3 [1088 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B] Get: 222 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-4 [290 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 224 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83.0 amd64 1.83.0-4 [320 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get: 226 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83.0 amd64 1.83.0-4 [358 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83-dev amd64 1.83.0-4 [237 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python-dev amd64 1.83.0.2+b2 [3712 B] Get: 229 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83.0 amd64 1.83.0-4 [234 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83-dev amd64 1.83.0-4 [236 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libboost-nowide-dev amd64 1.83.0.2+b2 [3668 B] Get: 232 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83.0 amd64 1.83.0-4 [242 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83-dev amd64 1.83.0-4 [246 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B] Get: 235 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-4 [347 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-4 [375 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 238 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.8-3 [2154 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.8-3 [5134 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.7-1 [9976 B] Get: 242 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.8-3 [505 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.7-1 [26.1 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83-dev amd64 1.83.0-4 [328 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B] Get: 246 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83.0 amd64 1.83.0-4 [238 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83-dev amd64 1.83.0-4 [240 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libboost-random-dev amd64 1.83.0.2+b2 [3592 B] Get: 249 http://deb.debian.org/debian unstable/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B] Get: 250 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 251 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-4 [283 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83-dev amd64 1.83.0-4 [245 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace-dev amd64 1.83.0.2+b2 [3592 B] Get: 254 http://deb.debian.org/debian unstable/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B] Get: 255 http://deb.debian.org/debian unstable/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B] Get: 256 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 257 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-4 [235 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-4 [236 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost1.83-tools-dev amd64 1.83.0-4 [1529 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-tools-dev amd64 1.83.0.2+b2 [3768 B] Get: 262 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83.0 amd64 1.83.0-4 [245 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83-dev amd64 1.83.0-4 [249 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure-dev amd64 1.83.0.2+b2 [3688 B] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83.0 amd64 1.83.0-4 [336 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83-dev amd64 1.83.0-4 [423 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-url-dev amd64 1.83.0.2+b2 [3732 B] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83.0 amd64 1.83.0-4 [437 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83-dev amd64 1.83.0-4 [486 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libboost-wave-dev amd64 1.83.0.2+b2 [3624 B] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-all-dev amd64 1.83.0.2+b2 [3936 B] Get: 272 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 277 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 282 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-1 [1340 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libcbf1t64 amd64 0.9.7+dfsg1-4+b2 [364 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libcctbx0 amd64 2024.10+ds2+~3.22.1+ds1-4+b1 [2350 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libnewmat10ldbl amd64 1.10.4-9 [151 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 libobjcryst0 amd64 2022.1.4+ds1-2 [718 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libobjcryst-dev amd64 2022.1.4+ds1-2 [99.9 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [1975 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.1-2 [2151 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.1-2 [5009 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.7-1 [1072 B] Get: 295 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-2 [740 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 297 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.1-2 [504 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.7-1 [1076 B] Get: 299 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 scons all 4.8.1+dfsg-1 [548 kB] Fetched 205 MB in 10s (21.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-3_amd64.deb ... Unpacking python3.12-minimal (3.12.8-3) ... Setting up libpython3.12-minimal:amd64 (3.12.8-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20285 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-3_amd64.deb ... Unpacking python3.12 (3.12.8-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../001-libpython3.13-minimal_3.13.1-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../002-python3.13-minimal_3.13.1-2_amd64.deb ... Unpacking python3.13-minimal (3.13.1-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../008-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.22.5-3_amd64.deb ... Unpacking gettext-base (0.22.5-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-6_amd64.deb ... Unpacking groff-base (1.23.0-6) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.40.2-12_amd64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../014-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../016-libedit2_3.1-20240808-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20240808-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../017-libcbor0.10_0.10.2-2_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-2) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../018-libfido2-1_1.15.0-1+b1_amd64.deb ... Unpacking libfido2-1:amd64 (1.15.0-1+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../019-openssh-client_1%3a9.9p1-3_amd64.deb ... Unpacking openssh-client (1:9.9p1-3) ... Selecting previously unselected package m4. Preparing to unpack .../020-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../021-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../022-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../023-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../024-autopoint_0.22.5-3_all.deb ... Unpacking autopoint (0.22.5-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../025-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../026-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../027-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../028-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../029-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../030-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../031-libelf1t64_0.192-4_amd64.deb ... 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Setting up libboost-url-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libboost-regex-dev:amd64 (1.83.0.2+b2) ... Setting up libpython3.13-stdlib:amd64 (3.13.1-2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libpython3.13:amd64 (3.13.1-2) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-4) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up libboost-json1.83-dev:amd64 (1.83.0-4) ... Setting up libboost-wave1.83-dev:amd64 (1.83.0-4) ... Setting up libboost-locale1.83-dev:amd64 (1.83.0-4) ... Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up python3.13 (3.13.1-2) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-4) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libboost-type-erasure1.83-dev:amd64 (1.83.0-4) ... Setting up libboost-random-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-locale-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-wave-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libboost-graph1.83-dev:amd64 (1.83.0-4) ... Setting up libboost-container-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-context1.83-dev:amd64 (1.83.0-4) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libboost-coroutine1.83-dev:amd64 (1.83.0-4) ... Setting up libboost-fiber1.83-dev:amd64 (1.83.0-4) ... Setting up libpython3.13-dev:amd64 (3.13.1-2) ... Setting up sphinx-common (8.1.3-2) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:amd64 (5.0.4-1) ... Setting up libhdf5-310:amd64 (1.14.5+repack-1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-log1.83-dev (1.83.0-4) ... Setting up libboost-json-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-log-dev (1.83.0.2+b2) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up libboost-graph-dev:amd64 (1.83.0.2+b2) ... Setting up libcbf1t64:amd64 (0.9.7+dfsg1-4+b2) ... Setting up libpython3.12-stdlib:amd64 (3.12.8-3) ... Setting up python3.13-dev (3.13.1-2) ... Setting up python3.12 (3.12.8-3) ... Setting up debhelper (13.20) ... Setting up libboost-context-dev:amd64 (1.83.0.2+b2) ... Setting up libibverbs-dev:amd64 (52.0-2+b1) ... Setting up libpython3.12t64:amd64 (3.12.8-3) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up libcctbx0 (2024.10+ds2+~3.22.1+ds1-4+b1) ... Setting up libobjcryst0 (2022.1.4+ds1-2) ... Setting up python3 (3.12.7-1) ... Setting up libpython3.12-dev:amd64 (3.12.8-3) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up python3-roman (4.2-1) ... Setting up python3-jinja2 (3.1.3-1.1) ... Setting up python3-packaging (24.2-1) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-idna (3.8-2) ... Setting up scons (4.8.1+dfsg-1) ... Setting up python3.12-dev (3.12.8-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-urllib3 (2.2.3-4) ... Setting up libobjcryst-dev (2022.1.4+ds1-2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up libpython3-dev:amd64 (3.12.7-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up libpython3-all-dev:amd64 (3.12.7-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.7-1) ... Setting up libboost-python1.83-dev (1.83.0-4) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.7-1) ... Setting up libopenmpi40:amd64 (5.0.6-3) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up libboost-mpi1.83.0 (1.83.0-4) ... Setting up openmpi-bin (5.0.6-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up dh-python (6.20241024) ... Setting up libboost-graph-parallel1.83.0 (1.83.0-4) ... Setting up mpi-default-bin (1.17) ... Setting up libboost-graph-parallel1.83-dev (1.83.0-4) ... Setting up libboost-mpi-python1.83.0 (1.83.0-4) ... Setting up libboost-graph-parallel-dev (1.83.0.2+b2) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-2) ... Setting up libpmix-dev:amd64 (5.0.4-1) ... Setting up libopenmpi-dev:amd64 (5.0.6-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.17) ... Setting up libboost-mpi1.83-dev (1.83.0-4) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libboost-mpi-python1.83-dev (1.83.0-4) ... Setting up libboost-mpi-python-dev (1.83.0.2+b2) ... Setting up libboost-all-dev (1.83.0.2+b2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/745313/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/745313/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/pyobjcryst-2024.2.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pyobjcryst_2024.2.1-1_source.changes dpkg-buildpackage: info: source package pyobjcryst dpkg-buildpackage: info: source version 2024.2.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from pyobjcryst-2024.2.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with numpy3,python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pyobjcryst-2024.2.1' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pyobjcryst.substvars debian/files rm -fr -- debian/python3-pyobjcryst/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f -r src/pyobjcryst/version.cfg src/pyobjcryst.egg-info/ .pybuild build/ rm -f -r .sconf_temp/ .sconsign.dblite config.log src/pyobjcryst/_pyobjcryst.so find . -name "*.pyc" -delete rm -f -r dist src/pyobjcryst/_pyobjcryst.* .pytest_cache/ debian/pyobjcryst make[1]: Leaving directory '/build/reproducible-path/pyobjcryst-2024.2.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pyobjcryst.substvars debian/files rm -fr -- debian/python3-pyobjcryst/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with numpy3,python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.13 3.12" W: pybuild base:341: missing command (plugin=custom, method=configure, interpreter=python3.13, version=3.13) W: pybuild base:341: missing command (plugin=custom, method=configure, interpreter=python3.12, version=3.12) dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.13 3.12" I: pybuild pybuild:308: mkdir -p debian/pyobjcryst I: pybuild base:311: scons -j 42 python=/usr/bin/python3.13 build=debug prefix=debian/pyobjcryst develop scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... yes Checking if compiler allows '-fno-strict-aliasing'... yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python313... yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.13 -Wignore setup.py egg_info g++ -o build/debug-3.13/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/asymmetricunit_ext.cpp g++ -o build/debug-3.13/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/atom_ext.cpp g++ -o build/debug-3.13/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/crystal_ext.cpp g++ -o build/debug-3.13/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/diffractiondatasinglecrystal_ext.cpp g++ -o build/debug-3.13/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/general_ext.cpp g++ -o build/debug-3.13/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/globaloptim_ext.cpp g++ -o build/debug-3.13/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/globalscatteringpower_ext.cpp g++ -o build/debug-3.13/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/helpers.cpp g++ -o build/debug-3.13/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/indexing_ext.cpp g++ -o build/debug-3.13/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/io_ext.cpp g++ -o build/debug-3.13/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/lsq_ext.cpp g++ -o build/debug-3.13/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/molatom_ext.cpp g++ -o build/debug-3.13/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/molbond_ext.cpp g++ -o build/debug-3.13/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/molbondangle_ext.cpp g++ -o build/debug-3.13/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/moldihedralangle_ext.cpp g++ -o build/debug-3.13/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/molecule_ext.cpp g++ -o build/debug-3.13/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/objregistry_ext.cpp g++ -o build/debug-3.13/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/polyhedron_ext.cpp g++ -o build/debug-3.13/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/powderpattern_ext.cpp g++ -o build/debug-3.13/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/powderpatternbackground_ext.cpp g++ -o build/debug-3.13/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/powderpatterncomponent_ext.cpp g++ -o build/debug-3.13/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/powderpatterndiffraction_ext.cpp g++ -o build/debug-3.13/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/pyobjcryst.cpp g++ -o build/debug-3.13/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/python_streambuf.cpp g++ -o build/debug-3.13/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/quaternion_ext.cpp g++ -o build/debug-3.13/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/radiation_ext.cpp g++ -o build/debug-3.13/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/refinableobj_ext.cpp g++ -o build/debug-3.13/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/refinableobjclock_ext.cpp g++ -o build/debug-3.13/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/refinablepar_ext.cpp g++ -o build/debug-3.13/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/reflectionprofile_ext.cpp g++ -o build/debug-3.13/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/refobjopt_ext.cpp g++ -o build/debug-3.13/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/refpartype_ext.cpp g++ -o build/debug-3.13/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/registerconverters.cpp g++ -o build/debug-3.13/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/restraint_ext.cpp g++ -o build/debug-3.13/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/rigidgroup_ext.cpp g++ -o build/debug-3.13/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatterer_ext.cpp g++ -o build/debug-3.13/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringcomponent_ext.cpp g++ -o build/debug-3.13/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringcomponentlist_ext.cpp g++ -o build/debug-3.13/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringdata_ext.cpp g++ -o build/debug-3.13/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringpower_ext.cpp g++ -o build/debug-3.13/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringpoweratom_ext.cpp g++ -o build/debug-3.13/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/scatteringpowersphere_ext.cpp running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '*.so' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' g++ -o build/debug-3.13/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/spacegroup_ext.cpp In file included from build/debug-3.13/python_streambuf.cpp:50: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.13/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/stretchmode_ext.cpp g++ -o build/debug-3.13/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/unitcell_ext.cpp g++ -o build/debug-3.13/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/zatom_ext.cpp In file included from build/debug-3.13/crystal_ext.cpp:46: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.13/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/zpolyhedron_ext.cpp In file included from build/debug-3.13/diffractiondatasinglecrystal_ext.cpp:36: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.13/io_ext.cpp:32: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.13/refinableobj_ext.cpp:47: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.13/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.13 -Ibuild/debug-3.13/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.13/debian/pyobjcryst/include -Ibuild/debug-3.13/debian/pyobjcryst/Library/include build/debug-3.13/zscatterer_ext.cpp In file included from build/debug-3.13/powderpattern_ext.cpp:33: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.13/indexing_ext.cpp:35: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.13/zscatterer_ext.cpp:32: build/debug-3.13/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.13/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.13/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.13/_pyobjcryst.so -shared build/debug-3.13/asymmetricunit_ext.os build/debug-3.13/atom_ext.os build/debug-3.13/crystal_ext.os build/debug-3.13/diffractiondatasinglecrystal_ext.os build/debug-3.13/general_ext.os build/debug-3.13/globaloptim_ext.os build/debug-3.13/globalscatteringpower_ext.os build/debug-3.13/helpers.os build/debug-3.13/indexing_ext.os build/debug-3.13/io_ext.os build/debug-3.13/lsq_ext.os build/debug-3.13/molatom_ext.os build/debug-3.13/molbond_ext.os build/debug-3.13/molbondangle_ext.os build/debug-3.13/moldihedralangle_ext.os build/debug-3.13/molecule_ext.os build/debug-3.13/objregistry_ext.os build/debug-3.13/polyhedron_ext.os build/debug-3.13/powderpattern_ext.os build/debug-3.13/powderpatternbackground_ext.os build/debug-3.13/powderpatterncomponent_ext.os build/debug-3.13/powderpatterndiffraction_ext.os build/debug-3.13/pyobjcryst.os build/debug-3.13/python_streambuf.os build/debug-3.13/quaternion_ext.os build/debug-3.13/radiation_ext.os build/debug-3.13/refinableobj_ext.os build/debug-3.13/refinableobjclock_ext.os build/debug-3.13/refinablepar_ext.os build/debug-3.13/reflectionprofile_ext.os build/debug-3.13/refobjopt_ext.os build/debug-3.13/refpartype_ext.os build/debug-3.13/registerconverters.os build/debug-3.13/restraint_ext.os build/debug-3.13/rigidgroup_ext.os build/debug-3.13/scatterer_ext.os build/debug-3.13/scatteringcomponent_ext.os build/debug-3.13/scatteringcomponentlist_ext.os build/debug-3.13/scatteringdata_ext.os build/debug-3.13/scatteringpower_ext.os build/debug-3.13/scatteringpoweratom_ext.os build/debug-3.13/scatteringpowersphere_ext.os build/debug-3.13/spacegroup_ext.os build/debug-3.13/stretchmode_ext.os build/debug-3.13/unitcell_ext.os build/debug-3.13/zatom_ext.os build/debug-3.13/zpolyhedron_ext.os build/debug-3.13/zscatterer_ext.os -Lbuild/debug-3.13/debian/pyobjcryst/lib -Lbuild/debug-3.13/debian/pyobjcryst/Library/bin -Lbuild/debug-3.13/debian/pyobjcryst/Library/lib -lObjCryst -lboost_python313 Install file: "build/debug-3.13/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" scons: done building targets. I: pybuild pybuild:308: mkdir -p debian/pyobjcryst I: pybuild base:311: scons -j 42 python=/usr/bin/python3.12 build=debug prefix=debian/pyobjcryst develop scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... (cached) yes Checking if compiler allows '-fno-strict-aliasing'... (cached) yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python312... yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.12 -Wignore setup.py egg_info g++ -o build/debug-3.12/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/asymmetricunit_ext.cpp g++ -o build/debug-3.12/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/atom_ext.cpp g++ -o build/debug-3.12/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/crystal_ext.cpp g++ -o build/debug-3.12/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/diffractiondatasinglecrystal_ext.cpp g++ -o build/debug-3.12/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/general_ext.cpp g++ -o build/debug-3.12/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/globaloptim_ext.cpp g++ -o build/debug-3.12/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/globalscatteringpower_ext.cpp g++ -o build/debug-3.12/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/helpers.cpp g++ -o build/debug-3.12/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/indexing_ext.cpp g++ -o build/debug-3.12/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/io_ext.cpp g++ -o build/debug-3.12/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/lsq_ext.cpp g++ -o build/debug-3.12/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/molatom_ext.cpp g++ -o build/debug-3.12/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/molbond_ext.cpp g++ -o build/debug-3.12/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/molbondangle_ext.cpp g++ -o build/debug-3.12/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/moldihedralangle_ext.cpp g++ -o build/debug-3.12/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/molecule_ext.cpp g++ -o build/debug-3.12/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/objregistry_ext.cpp g++ -o build/debug-3.12/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/polyhedron_ext.cpp running egg_info g++ -o build/debug-3.12/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/powderpattern_ext.cpp writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt g++ -o build/debug-3.12/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/powderpatternbackground_ext.cpp g++ -o build/debug-3.12/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/powderpatterncomponent_ext.cpp g++ -o build/debug-3.12/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/powderpatterndiffraction_ext.cpp g++ -o build/debug-3.12/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/pyobjcryst.cpp g++ -o build/debug-3.12/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/python_streambuf.cpp reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' g++ -o build/debug-3.12/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/quaternion_ext.cpp warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution g++ -o build/debug-3.12/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/radiation_ext.cpp warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' g++ -o build/debug-3.12/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/refinableobj_ext.cpp writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' g++ -o build/debug-3.12/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/refinableobjclock_ext.cpp g++ -o build/debug-3.12/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/refinablepar_ext.cpp g++ -o build/debug-3.12/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/reflectionprofile_ext.cpp g++ -o build/debug-3.12/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/refobjopt_ext.cpp g++ -o build/debug-3.12/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/refpartype_ext.cpp g++ -o build/debug-3.12/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/registerconverters.cpp g++ -o build/debug-3.12/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/restraint_ext.cpp g++ -o build/debug-3.12/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/rigidgroup_ext.cpp g++ -o build/debug-3.12/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatterer_ext.cpp g++ -o build/debug-3.12/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringcomponent_ext.cpp g++ -o build/debug-3.12/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringcomponentlist_ext.cpp g++ -o build/debug-3.12/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringdata_ext.cpp g++ -o build/debug-3.12/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringpower_ext.cpp g++ -o build/debug-3.12/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringpoweratom_ext.cpp g++ -o build/debug-3.12/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/scatteringpowersphere_ext.cpp g++ -o build/debug-3.12/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/spacegroup_ext.cpp In file included from build/debug-3.12/python_streambuf.cpp:50: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.12/io_ext.cpp:32: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/stretchmode_ext.cpp g++ -o build/debug-3.12/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/unitcell_ext.cpp g++ -o build/debug-3.12/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/zatom_ext.cpp In file included from build/debug-3.12/powderpattern_ext.cpp:33: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/zpolyhedron_ext.cpp g++ -o build/debug-3.12/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -DREAL=double -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include -Ibuild/debug-3.12/debian/pyobjcryst/include -Ibuild/debug-3.12/debian/pyobjcryst/Library/include build/debug-3.12/zscatterer_ext.cpp In file included from build/debug-3.12/refinableobj_ext.cpp:47: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.12/diffractiondatasinglecrystal_ext.cpp:36: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.12/crystal_ext.cpp:46: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.12/indexing_ext.cpp:35: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In file included from build/debug-3.12/zscatterer_ext.cpp:32: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/_pyobjcryst.so -shared build/debug-3.12/asymmetricunit_ext.os build/debug-3.12/atom_ext.os build/debug-3.12/crystal_ext.os build/debug-3.12/diffractiondatasinglecrystal_ext.os build/debug-3.12/general_ext.os build/debug-3.12/globaloptim_ext.os build/debug-3.12/globalscatteringpower_ext.os build/debug-3.12/helpers.os build/debug-3.12/indexing_ext.os build/debug-3.12/io_ext.os build/debug-3.12/lsq_ext.os build/debug-3.12/molatom_ext.os build/debug-3.12/molbond_ext.os build/debug-3.12/molbondangle_ext.os build/debug-3.12/moldihedralangle_ext.os build/debug-3.12/molecule_ext.os build/debug-3.12/objregistry_ext.os build/debug-3.12/polyhedron_ext.os build/debug-3.12/powderpattern_ext.os build/debug-3.12/powderpatternbackground_ext.os build/debug-3.12/powderpatterncomponent_ext.os build/debug-3.12/powderpatterndiffraction_ext.os build/debug-3.12/pyobjcryst.os build/debug-3.12/python_streambuf.os build/debug-3.12/quaternion_ext.os build/debug-3.12/radiation_ext.os build/debug-3.12/refinableobj_ext.os build/debug-3.12/refinableobjclock_ext.os build/debug-3.12/refinablepar_ext.os build/debug-3.12/reflectionprofile_ext.os build/debug-3.12/refobjopt_ext.os build/debug-3.12/refpartype_ext.os build/debug-3.12/registerconverters.os build/debug-3.12/restraint_ext.os build/debug-3.12/rigidgroup_ext.os build/debug-3.12/scatterer_ext.os build/debug-3.12/scatteringcomponent_ext.os build/debug-3.12/scatteringcomponentlist_ext.os build/debug-3.12/scatteringdata_ext.os build/debug-3.12/scatteringpower_ext.os build/debug-3.12/scatteringpoweratom_ext.os build/debug-3.12/scatteringpowersphere_ext.os build/debug-3.12/spacegroup_ext.os build/debug-3.12/stretchmode_ext.os build/debug-3.12/unitcell_ext.os build/debug-3.12/zatom_ext.os build/debug-3.12/zpolyhedron_ext.os build/debug-3.12/zscatterer_ext.os -Lbuild/debug-3.12/debian/pyobjcryst/lib -Lbuild/debug-3.12/debian/pyobjcryst/Library/bin -Lbuild/debug-3.12/debian/pyobjcryst/Library/lib -lObjCryst -lboost_python312 Install file: "build/debug-3.12/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" scons: done building targets. dh_auto_test -O--buildsystem=pybuild pybuild --test -i python{version} -p "3.13 3.12" I: pybuild base:311: PYTHONPATH=src scons python=/usr/bin/python3.13 build=debug prefix=debian/pyobjcryst test scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... (cached) yes Checking if compiler allows '-fno-strict-aliasing'... (cached) yes Checking for C++ library ObjCryst... (cached) yes Checking for C++ library boost_python313... (cached) yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.13 -Wignore setup.py egg_info running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' Install file: "build/debug-3.13/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" /usr/bin/python3.13 -m pyobjcryst.tests.run .../build/reproducible-path/pyobjcryst-2024.2.1/src/pyobjcryst/__init__.py:97: DeprecationWarning: loadCrystal is deprecated. Please use pyobjcryst.crystal.create_crystal_from_cif() instead warnings.warn("loadCrystal is deprecated. Please use " ............................................................................................................. ---------------------------------------------------------------------- Ran 112 tests in 64.141s OK scons: done building targets. I: pybuild base:311: PYTHONPATH=src scons python=/usr/bin/python3.12 build=debug prefix=debian/pyobjcryst test scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... (cached) yes Checking if compiler allows '-fno-strict-aliasing'... (cached) yes Checking for C++ library ObjCryst... (cached) yes Checking for C++ library boost_python312... (cached) yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.12 -Wignore setup.py egg_info running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' Install file: "build/debug-3.12/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" /usr/bin/python3.12 -m pyobjcryst.tests.run .../build/reproducible-path/pyobjcryst-2024.2.1/src/pyobjcryst/__init__.py:97: DeprecationWarning: loadCrystal is deprecated. Please use pyobjcryst.crystal.create_crystal_from_cif() instead warnings.warn("loadCrystal is deprecated. Please use " ............................................................................................................. ---------------------------------------------------------------------- Ran 112 tests in 90.892s OK scons: done building targets. rm -fr -- /tmp/dh-xdg-rundir-ZK3UMqMO create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-pyobjcryst.substvars rm -fr -- debian/.debhelper/generated/python3-pyobjcryst/ debian/python3-pyobjcryst/ debian/tmp/ dh_auto_install --destdir=debian/python3-pyobjcryst/ -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/pyobjcryst-2024.2.1/debian/python3-pyobjcryst pybuild --install -i python{version} -p "3.13 3.12" --dest-dir /build/reproducible-path/pyobjcryst-2024.2.1/debian/python3-pyobjcryst I: pybuild base:311: scons python=/usr/bin/python3.13 build=debug prefix=debian/pyobjcryst install scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... (cached) yes Checking if compiler allows '-fno-strict-aliasing'... (cached) yes Checking for C++ library ObjCryst... (cached) yes Checking for C++ library boost_python313... (cached) yes scons: done reading SConscript files. scons: Building targets ... resolve_distutils_target(["install"], ["build/debug-3.13/_pyobjcryst.so"]) Mkdir("build/lib.linux-x86_64-cpython-313/pyobjcryst") Copy("build/lib.linux-x86_64-cpython-313/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so", "build/debug-3.13/_pyobjcryst.so") Touch("build/lib.linux-x86_64-cpython-313/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so") /usr/bin/python3.13 setup.py install --install-layout=deb --prefix=debian/pyobjcryst /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` and ``easy_install``. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://github.com/pypa/setuptools/issues/917 for details. ******************************************************************************** !! self.initialize_options() Checking .pth file support in debian/pyobjcryst/lib/python3/dist-packages/ /usr/bin/python3.13 -E -c pass TEST FAILED: debian/pyobjcryst/lib/python3/dist-packages/ does NOT support .pth files bad install directory or PYTHONPATH You are attempting to install a package to a directory that is not on PYTHONPATH and which Python does not read ".pth" files from. The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: debian/pyobjcryst/lib/python3/dist-packages/ and your PYTHONPATH environment variable currently contains: '' Here are some of your options for correcting the problem: * You can choose a different installation directory, i.e., one that is on PYTHONPATH or supports .pth files * You can add the installation directory to the PYTHONPATH environment variable. (It must then also be on PYTHONPATH whenever you run Python and want to use the package(s) you are installing.) * You can set up the installation directory to support ".pth" files by using one of the approaches described here: https://setuptools.pypa.io/en/latest/deprecated/easy_install.html#custom-installation-locations Please make the appropriate changes for your system and try again. running bdist_egg running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py copying src/pyobjcryst/globals.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/scatteringpowersphere.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/crystal.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/general.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/scatteringpower.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/polyhedron.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/globaloptim.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/io.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/diffractiondatasinglecrystal.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/scatterer.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/fourier.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/zscatterer.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/version.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/atom.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/lsq.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/__init__.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/spacegroup.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/unitcell.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/utils.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/molecule.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/refinableobj.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/powderpattern.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/radiation.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/indexing.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/scatteringdata.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst copying src/pyobjcryst/reflectionprofile.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst creating build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testindexing.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/debug.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testcif.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/test_single_crystal_data.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testclocks.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttest.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testglobaloptim.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testpowderpattern.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testcrystal.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testlsq.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testutils.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testmolecule.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testspacegroup.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/__init__.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttestutils.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/run.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testrefinableobj.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testradiation.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests copying src/pyobjcryst/tests/testconverters.py -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests /usr/lib/python3/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'pyobjcryst.tests.testdata' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyobjcryst.tests.testdata' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyobjcryst.tests.testdata' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyobjcryst.tests.testdata' to be distributed and are already explicitly excluding 'pyobjcryst.tests.testdata' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying src/pyobjcryst/version.cfg -> build/lib.linux-x86_64-cpython-313/pyobjcryst creating build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ag_silver.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/BaTiO3.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaTiO3.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CeO2.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/NaCl.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ni.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbS_galena.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbTe.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si_setting2.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/caffeine.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/cime.fhz -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ni.stru -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata running build_ext creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/globals.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/scatteringpowersphere.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/crystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/general.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/scatteringpower.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/polyhedron.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/globaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/io.py -> build/bdist.linux-x86_64/egg/pyobjcryst creating build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testindexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/debug.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testcif.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/test_single_crystal_data.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testclocks.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/pyobjcrysttest.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testglobaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testpowderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testcrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testlsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests creating build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/cime.fhz -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/ni.stru -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/NaCl.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/PbTe.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/CaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/Si_setting2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/caffeine.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/Si.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/paracetamol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/CeO2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/Ni.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/BaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/Ag_silver.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testdata/PbS_galena.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testmolecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testspacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/pyobjcrysttestutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/run.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testrefinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testradiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/tests/testconverters.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-313/pyobjcryst/diffractiondatasinglecrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/scatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/fourier.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/zscatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/version.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/atom.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/lsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/spacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/unitcell.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/utils.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/molecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/version.cfg -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/refinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/powderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/radiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/indexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/scatteringdata.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-313/pyobjcryst/reflectionprofile.py -> build/bdist.linux-x86_64/egg/pyobjcryst byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globals.py to globals.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpowersphere.py to scatteringpowersphere.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/crystal.py to crystal.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/general.py to general.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpower.py to scatteringpower.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/polyhedron.py to polyhedron.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globaloptim.py to globaloptim.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/io.py to io.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testindexing.py to testindexing.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/debug.py to debug.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcif.py to testcif.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/test_single_crystal_data.py to test_single_crystal_data.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testclocks.py to testclocks.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttest.py to pyobjcrysttest.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testglobaloptim.py to testglobaloptim.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testpowderpattern.py to testpowderpattern.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcrystal.py to testcrystal.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testlsq.py to testlsq.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testutils.py to testutils.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testmolecule.py to testmolecule.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testspacegroup.py to testspacegroup.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/__init__.py to __init__.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttestutils.py to pyobjcrysttestutils.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/run.py to run.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testrefinableobj.py to testrefinableobj.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testradiation.py to testradiation.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testconverters.py to testconverters.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/diffractiondatasinglecrystal.py to diffractiondatasinglecrystal.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatterer.py to scatterer.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/fourier.py to fourier.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/zscatterer.py to zscatterer.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/version.py to version.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/atom.py to atom.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/lsq.py to lsq.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/__init__.py to __init__.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/spacegroup.py to spacegroup.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/unitcell.py to unitcell.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/utils.py to utils.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/molecule.py to molecule.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/refinableobj.py to refinableobj.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/powderpattern.py to powderpattern.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/radiation.py to radiation.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/indexing.py to indexing.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringdata.py to scatteringdata.cpython-313.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/reflectionprofile.py to reflectionprofile.cpython-313.pyc creating stub loader for pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/_pyobjcryst.py to _pyobjcryst.cpython-313.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt creating dist creating 'dist/pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg creating /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg Extracting pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg to /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages Installed /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg Processing dependencies for pyobjcryst==2024.2.1 Searching for packaging==24.2 Best match: packaging 24.2 Using /usr/lib/python3/dist-packages Searching for numpy==1.26.4 Best match: numpy 1.26.4 Installing f2py script to debian/pyobjcryst/bin Installing f2py3 script to debian/pyobjcryst/bin Installing f2py3.13 script to debian/pyobjcryst/bin Installing f2py3.12 script to debian/pyobjcryst/bin Using /usr/lib/python3/dist-packages Finished processing dependencies for pyobjcryst==2024.2.1 scons: done building targets. I: pybuild base:311: scons python=/usr/bin/python3.12 build=debug prefix=debian/pyobjcryst install scons: Reading SConscript files ... Checking if compiler allows '-fno-strict-overflow'... (cached) yes Checking if compiler allows '-fno-strict-aliasing'... (cached) yes Checking for C++ library ObjCryst... (cached) yes Checking for C++ library boost_python312... (cached) yes scons: done reading SConscript files. scons: Building targets ... resolve_distutils_target(["install"], ["build/debug-3.12/_pyobjcryst.so"]) Mkdir("build/lib.linux-x86_64-cpython-312/pyobjcryst") Copy("build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so", "build/debug-3.12/_pyobjcryst.so") Touch("build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so") /usr/bin/python3.12 setup.py install --install-layout=deb --prefix=debian/pyobjcryst /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` and ``easy_install``. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://github.com/pypa/setuptools/issues/917 for details. ******************************************************************************** !! self.initialize_options() Checking .pth file support in debian/pyobjcryst/lib/python3/dist-packages/ /usr/bin/python3.12 -E -c pass TEST FAILED: debian/pyobjcryst/lib/python3/dist-packages/ does NOT support .pth files bad install directory or PYTHONPATH You are attempting to install a package to a directory that is not on PYTHONPATH and which Python does not read ".pth" files from. The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: debian/pyobjcryst/lib/python3/dist-packages/ and your PYTHONPATH environment variable currently contains: '' Here are some of your options for correcting the problem: * You can choose a different installation directory, i.e., one that is on PYTHONPATH or supports .pth files * You can add the installation directory to the PYTHONPATH environment variable. (It must then also be on PYTHONPATH whenever you run Python and want to use the package(s) you are installing.) * You can set up the installation directory to support ".pth" files by using one of the approaches described here: https://setuptools.pypa.io/en/latest/deprecated/easy_install.html#custom-installation-locations Please make the appropriate changes for your system and try again. running bdist_egg running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py copying src/pyobjcryst/globals.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringpowersphere.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/crystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/general.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringpower.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/polyhedron.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/globaloptim.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/io.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/diffractiondatasinglecrystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatterer.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/fourier.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/zscatterer.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/version.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/atom.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/lsq.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/__init__.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/spacegroup.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/unitcell.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/utils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/molecule.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/refinableobj.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/powderpattern.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/radiation.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/indexing.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringdata.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/reflectionprofile.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst creating build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testindexing.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/debug.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testcif.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/test_single_crystal_data.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testclocks.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttest.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testglobaloptim.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testpowderpattern.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testcrystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testlsq.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testutils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testmolecule.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testspacegroup.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/__init__.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttestutils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/run.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testrefinableobj.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testradiation.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testconverters.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests /usr/lib/python3/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'pyobjcryst.tests.testdata' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyobjcryst.tests.testdata' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyobjcryst.tests.testdata' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyobjcryst.tests.testdata' to be distributed and are already explicitly excluding 'pyobjcryst.tests.testdata' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying src/pyobjcryst/version.cfg -> build/lib.linux-x86_64-cpython-312/pyobjcryst creating build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ag_silver.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/BaTiO3.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaTiO3.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CeO2.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/NaCl.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ni.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbS_galena.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbTe.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si_setting2.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/caffeine.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/cime.fhz -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ni.stru -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata running build_ext creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/globals.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringpowersphere.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/crystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/general.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringpower.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/polyhedron.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/globaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/io.py -> build/bdist.linux-x86_64/egg/pyobjcryst creating build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testindexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/debug.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testcif.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/test_single_crystal_data.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testclocks.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/pyobjcrysttest.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testglobaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testpowderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testcrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testlsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests creating build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/cime.fhz -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ni.stru -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/NaCl.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/PbTe.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Si_setting2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/caffeine.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Si.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CeO2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Ni.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/BaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Ag_silver.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/PbS_galena.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testmolecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testspacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/pyobjcrysttestutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/run.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testrefinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testradiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testconverters.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/diffractiondatasinglecrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/fourier.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/zscatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/version.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/atom.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/lsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/spacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/unitcell.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/utils.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/molecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/version.cfg -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/refinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/powderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/radiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/indexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringdata.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/reflectionprofile.py -> build/bdist.linux-x86_64/egg/pyobjcryst byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globals.py to globals.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpowersphere.py to scatteringpowersphere.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/crystal.py to crystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/general.py to general.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpower.py to scatteringpower.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/polyhedron.py to polyhedron.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globaloptim.py to globaloptim.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/io.py to io.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testindexing.py to testindexing.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/debug.py to debug.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcif.py to testcif.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/test_single_crystal_data.py to test_single_crystal_data.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testclocks.py to testclocks.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttest.py to pyobjcrysttest.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testglobaloptim.py to testglobaloptim.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testpowderpattern.py to testpowderpattern.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcrystal.py to testcrystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testlsq.py to testlsq.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testutils.py to testutils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testmolecule.py to testmolecule.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testspacegroup.py to testspacegroup.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/__init__.py to __init__.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttestutils.py to pyobjcrysttestutils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/run.py to run.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testrefinableobj.py to testrefinableobj.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testradiation.py to testradiation.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testconverters.py to testconverters.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/diffractiondatasinglecrystal.py to diffractiondatasinglecrystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatterer.py to scatterer.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/fourier.py to fourier.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/zscatterer.py to zscatterer.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/version.py to version.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/atom.py to atom.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/lsq.py to lsq.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/__init__.py to __init__.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/spacegroup.py to spacegroup.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/unitcell.py to unitcell.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/utils.py to utils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/molecule.py to molecule.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/refinableobj.py to refinableobj.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/powderpattern.py to powderpattern.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/radiation.py to radiation.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/indexing.py to indexing.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringdata.py to scatteringdata.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/reflectionprofile.py to reflectionprofile.cpython-312.pyc creating stub loader for pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/_pyobjcryst.py to _pyobjcryst.cpython-312.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt creating 'dist/pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg creating /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg Extracting pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg to /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages Installed /build/reproducible-path/pyobjcryst-2024.2.1/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg Processing dependencies for pyobjcryst==2024.2.1 Searching for packaging==24.2 Best match: packaging 24.2 Using /usr/lib/python3/dist-packages Searching for numpy==1.26.4 Best match: numpy 1.26.4 Installing f2py script to debian/pyobjcryst/bin Installing f2py3 script to debian/pyobjcryst/bin Installing f2py3.13 script to debian/pyobjcryst/bin Installing f2py3.12 script to debian/pyobjcryst/bin Using /usr/lib/python3/dist-packages Finished processing dependencies for pyobjcryst==2024.2.1 scons: done building targets. dh_install -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/./usr/lib/python3/dist-packages/ cp --reflink=auto -a ./debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg/EGG-INFO debian/python3-pyobjcryst/./usr/lib/python3/dist-packages// install -m0755 -d debian/python3-pyobjcryst/./usr/lib/python3/dist-packages/ cp --reflink=auto -a ./debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg/EGG-INFO debian/python3-pyobjcryst/./usr/lib/python3/dist-packages// install -m0755 -d debian/python3-pyobjcryst/./usr/lib/python3/dist-packages/ cp --reflink=auto -a ./debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.12-linux-x86_64.egg/pyobjcryst debian/python3-pyobjcryst/./usr/lib/python3/dist-packages// install -m0755 -d debian/python3-pyobjcryst/./usr/lib/python3/dist-packages/ cp --reflink=auto -a ./debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2024.2.1-py3.13-linux-x86_64.egg/pyobjcryst debian/python3-pyobjcryst/./usr/lib/python3/dist-packages// install -m0755 -d debian/python3-pyobjcryst/./usr/lib/python3/dist-packages/ dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst install -p -m0644 debian/README.Debian debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/README.Debian install -p -m0644 debian/copyright debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst install -p -m0644 debian/.debhelper/generated/python3-pyobjcryst/dh_installchangelogs.dch.trimmed debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/changelog dh_installexamples -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a ./examples/crystal_3d_widget.ipynb debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a "./examples/QPA-Quantitative phase analysis.ipynb" debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a ./examples/single-crystal-data.ipynb debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a ./examples/structure-solution-multiprocessing.ipynb debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a ./examples/structure-solution-powder-cimetidine.ipynb debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples cp --reflink=auto -a ./examples/structure-solution-powder-pbso4.ipynb debian/python3-pyobjcryst/usr/share/doc/python3-pyobjcryst/examples dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12,3.13 (default=3.12) D: dh_python3 debhelper:174: source=pyobjcryst, binary packages=['python3-pyobjcryst'] D: dh_python3 dh_python3:205: processing package python3-pyobjcryst... D: dh_python3 fs:338: package python3-pyobjcryst details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13'), Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-pyobjcryst D: dh_python3 depends:253: D={'python3 (>= 3.12~)', 'python3:any', 'python3 (<< 3.14)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/python3-pyobjcryst chmod a-x usr/share/doc/python3-pyobjcryst/changelog usr/share/doc/python3-pyobjcryst/changelog.Debian gzip -9nf usr/share/doc/python3-pyobjcryst/changelog usr/share/doc/python3-pyobjcryst/changelog.Debian cd '/build/reproducible-path/pyobjcryst-2024.2.1' dh_fixperms -O--buildsystem=pybuild find debian/python3-pyobjcryst ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-pyobjcryst/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-pyobjcryst/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pyobjcryst/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-pyobjcryst -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pyobjcryst/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/python3-pyobjcryst/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-pyobjcryst.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-pyobjcryst.debug -- debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so objcopy --compress-debug-sections debian/python3-pyobjcryst/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-pyobjcryst.debug chmod 0644 -- debian/python3-pyobjcryst/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-pyobjcryst.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/5d/d54261d42311b9b4054e804a4a1e77a9888fdf.debug chmod 0644 -- debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/5d/d54261d42311b9b4054e804a4a1e77a9888fdf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/5d/d54261d42311b9b4054e804a4a1e77a9888fdf.debug debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/63 objcopy --only-keep-debug --compress-debug-sections debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/63/ce0c16971f66cac91ddbcdc3eb07dbfadaec3c.debug chmod 0644 -- debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/63/ce0c16971f66cac91ddbcdc3eb07dbfadaec3c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.build-id/63/ce0c16971f66cac91ddbcdc3eb07dbfadaec3c.debug debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-pyobjcryst/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-pyobjcryst/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-pyobjcryst/usr/lib/debug install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/share/doc ln -s python3-pyobjcryst debian/.debhelper/python3-pyobjcryst/dbgsym-root/usr/share/doc/python3-pyobjcryst-dbgsym install -m0755 -d debian/.debhelper/python3-pyobjcryst dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python3-pyobjcryst/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/DEBIAN dpkg-shlibdeps -Tdebian/python3-pyobjcryst.substvars debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-313-x86_64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-pyobjcryst/DEBIAN/postinst cat debian/python3-pyobjcryst.postinst.debhelper >> debian/python3-pyobjcryst/DEBIAN/postinst chmod 0755 -- debian/python3-pyobjcryst/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-pyobjcryst/DEBIAN/prerm cat debian/python3-pyobjcryst.prerm.debhelper >> debian/python3-pyobjcryst/DEBIAN/prerm chmod 0755 -- debian/python3-pyobjcryst/DEBIAN/prerm dh_numpy3 -O--buildsystem=pybuild mv debian/python3-pyobjcryst.substvars.new debian/python3-pyobjcryst.substvars dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/DEBIAN echo misc:Depends= >> debian/python3-pyobjcryst.substvars echo misc:Pre-Depends= >> debian/python3-pyobjcryst.substvars install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-pyobjcryst -ldebian/changelog -Tdebian/python3-pyobjcryst.substvars -cdebian/control -Pdebian/.debhelper/python3-pyobjcryst/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-pyobjcryst-dbgsym "-DDepends=python3-pyobjcryst (= \${binary:Version})" "-DDescription=debug symbols for python3-pyobjcryst" "-DBuild-Ids=5dd54261d42311b9b4054e804a4a1e77a9888fdf 63ce0c16971f66cac91ddbcdc3eb07dbfadaec3c" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/python3-pyobjcryst/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-pyobjcryst -ldebian/changelog -Tdebian/python3-pyobjcryst.substvars -cdebian/control -Pdebian/python3-pyobjcryst chmod 0644 -- debian/python3-pyobjcryst/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-pyobjcryst/DEBIAN cd debian/python3-pyobjcryst >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-pyobjcryst/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-pyobjcryst/dbgsym-root/DEBIAN cd debian/.debhelper/python3-pyobjcryst/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-pyobjcryst/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/.debhelper/python3-pyobjcryst/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python3-pyobjcryst .. dpkg-deb: building package 'python3-pyobjcryst' in '../python3-pyobjcryst_2024.2.1-1_amd64.deb'. dpkg-deb: building package 'python3-pyobjcryst-dbgsym' in '../python3-pyobjcryst-dbgsym_2024.2.1-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pyobjcryst_2024.2.1-1_amd64.buildinfo dpkg-genchanges --build=binary -O../pyobjcryst_2024.2.1-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from pyobjcryst-2024.2.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/745313/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/745313/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/745313 and its subdirectories I: Current time: Mon Jan 19 10:36:51 +14 2026 I: pbuilder-time-stamp: 1768768611