I: pbuilder: network access will be disabled during build I: Current time: Fri Jan 23 12:15:17 +14 2026 I: pbuilder-time-stamp: 1769120117 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [openmm_8.1.2+dfsg-2.dsc] I: copying [./openmm_8.1.2+dfsg.orig.tar.xz] I: copying [./openmm_8.1.2+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 19 12:44:58 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openmm_8.1.2+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting openmm in openmm-8.1.2+dfsg dpkg-source: info: unpacking openmm_8.1.2+dfsg.orig.tar.xz dpkg-source: info: unpacking openmm_8.1.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying SIMDe.patch dpkg-source: info: applying skip-tests.patch dpkg-source: info: applying default_plugin_dir.diff dpkg-source: info: applying ignore-stochastic-test-failures.patch dpkg-source: info: applying reproducible-build.patch dpkg-source: info: applying disable-jit-on-armel-armhf.patch dpkg-source: warning: diff 'openmm-8.1.2+dfsg/debian/patches/4602.patch' patches file openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py more than once dpkg-source: info: applying 4602.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 22 22:15 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=4692df0af3ef4deca891b91d677db704 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1317021 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.N3lHYMT0/pbuilderrc_mdig --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.N3lHYMT0/b2 --logfile b2/build.log openmm_8.1.2+dfsg-2.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: chrpath, cmake, cython3, debhelper-compat (= 13), dh-python, doxygen, dpkg-dev (>= 1.22.5), libsimde-dev, ocl-icd-opencl-dev, python3-all-dev:any, python3-numpy, python3-pytest, python3-pytest-xdist, python3-scipy, swig dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19967 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on ocl-icd-opencl-dev; however: Package ocl-icd-opencl-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libblas3{a} libbrotli1{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libgfortran5{a} libgssapi-krb5-2{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsimde-dev{a} libssh2-1t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-decorator{a} python3-dev{a} python3-execnet{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-pytest-xdist{a} python3-scipy{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} swig{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libgl-dev libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-pil python3-pooch python3-pygments wget 0 packages upgraded, 128 newly installed, 0 to remove and 0 not upgraded. Need to get 163 MB of archives. After unpacking 761 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.8-3 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.8-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.8-3 [1969 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.8-3 [677 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-2 [858 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-2 [2198 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-3 [200 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-6 [1184 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-3 [723 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.18-1 [13.5 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.2-1 [2267 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.2-1 [11.9 MB] Get: 60 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.11+dfsg-1+b1 [3157 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.22 [90.5 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 67 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-3 [1600 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.22 [919 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 79 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.6.0-1 [720 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241217 [113 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.6-1 [26.0 MB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libclang-cpp19 amd64 1:19.1.6-1 [13.2 MB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.6-1 [7632 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b3 [5011 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-11 [836 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-2 [30.3 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.8-3 [2154 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.8-3 [5134 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.7-1 [9976 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [1975 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.1-2 [2151 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.1-2 [5009 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.7-1 [1072 B] Get: 108 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-2 [467 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.10.24-2 [46.8 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2024.10.24-2 [50.7 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b2 [8672 B] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-2 [740 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.8-3 [505 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.7-1 [26.1 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.1-2 [504 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.7-1 [1076 B] Get: 119 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 python3-execnet all 2.1.1-1 [40.2 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 122 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.4-1 [250 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-3 [20.5 MB] Get: 128 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Fetched 163 MB in 2s (94.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19967 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-3_amd64.deb ... Unpacking python3.12-minimal (3.12.8-3) ... Setting up libpython3.12-minimal:amd64 (3.12.8-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20287 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-3_amd64.deb ... Unpacking python3.12 (3.12.8-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21350 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../001-libpython3.13-minimal_3.13.1-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../002-python3.13-minimal_3.13.1-2_amd64.deb ... Unpacking python3.13-minimal (3.13.1-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../003-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../007-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.22.5-3_amd64.deb ... Unpacking gettext-base (0.22.5-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../010-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.23.0-6_amd64.deb ... Unpacking groff-base (1.23.0-6) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../012-bsdextrautils_2.40.2-12_amd64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:amd64. 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Selecting previously unselected package chrpath. Preparing to unpack .../020-chrpath_0.18-1_amd64.deb ... Unpacking chrpath (0.18-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../021-cmake-data_3.31.2-1_all.deb ... Unpacking cmake-data (3.31.2-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../022-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../023-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package libarchive13t64:amd64. Preparing to unpack .../024-libarchive13t64_3.7.4-1.1_amd64.deb ... Unpacking libarchive13t64:amd64 (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../025-libbrotli1_1.1.0-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b6) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../026-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../027-libsasl2-2_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../028-libldap-2.5-0_2.5.18+dfsg-3+b1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../029-libnghttp2-14_1.64.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../030-libpsl5t64_0.21.2-1.1+b1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../031-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../032-libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../033-libcurl4t64_8.11.1-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.11.1-1) ... Selecting previously unselected package libjsoncpp26:amd64. Preparing to unpack .../034-libjsoncpp26_1.9.6-3_amd64.deb ... Unpacking libjsoncpp26:amd64 (1.9.6-3) ... Selecting previously unselected package librhash1:amd64. Preparing to unpack .../035-librhash1_1.4.5-1_amd64.deb ... Unpacking librhash1:amd64 (1.4.5-1) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../036-libuv1t64_1.48.0-7_amd64.deb ... Unpacking libuv1t64:amd64 (1.48.0-7) ... Selecting previously unselected package cmake. Preparing to unpack .../037-cmake_3.31.2-1_amd64.deb ... Unpacking cmake (3.31.2-1) ... Selecting previously unselected package cython3. Preparing to unpack .../038-cython3_3.0.11+dfsg-1+b1_amd64.deb ... Unpacking cython3 (3.0.11+dfsg-1+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../039-libdebhelper-perl_13.22_all.deb ... Unpacking libdebhelper-perl (13.22) ... Selecting previously unselected package libtool. Preparing to unpack .../040-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../041-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../042-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../044-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../045-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../046-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../047-gettext_0.22.5-3_amd64.deb ... Unpacking gettext (0.22.5-3) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../048-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../049-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../050-debhelper_13.22_all.deb ... Unpacking debhelper (13.22) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../051-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../052-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../053-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../054-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... 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Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jan 22 22:16:15 UTC 2026. Universal Time is now: Thu Jan 22 22:16:15 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libpython3.13-minimal:amd64 (3.13.1-2) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libblas3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.6.4-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libjsoncpp26:amd64 (1.9.6-3) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up autopoint (0.22.5-3) ... 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Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libllvm19:amd64 (1:19.1.6-1) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-3) ... Setting up libclang1-19 (1:19.1.6-1) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up opencl-clhpp-headers (3.0~2024.10.24-2) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libjs-sphinxdoc (8.1.3-2) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b2) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-6) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libpython3.13-stdlib:amd64 (3.13.1-2) ... Setting up libclang-cpp19 (1:19.1.6-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libpython3.13:amd64 (3.13.1-2) ... Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up python3.13 (3.13.1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libpython3.13-dev:amd64 (3.13.1-2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.31.2-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.8-3) ... Setting up python3.13-dev (3.13.1-2) ... Setting up python3.12 (3.12.8-3) ... Setting up debhelper (13.22) ... 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Setting up libpython3-all-dev:amd64 (3.12.7-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.7-1) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up python3-all-dev (3.12.7-1) ... Setting up python3-setuptools (75.6.0-1) ... Setting up python3-pytest-xdist (3.6.1-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up dh-python (6.20241217) ... Setting up python3-scipy (1.14.1-3) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/openmm-8.1.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../openmm_8.1.2+dfsg-2_source.changes dpkg-buildpackage: info: source package openmm dpkg-buildpackage: info: source version 8.1.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem cmake --with numpy3,python3 dh_auto_clean -O--buildsystem=cmake debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' rm -rf .pybuild make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem cmake --with numpy3,python3 dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_auto_configure -- -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_FLAGS_RELEASE="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_CXX_FLAGS_RELEASE="-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_SHARED_LINKER_FLAGS_RELEASE="-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE=ON "-DCMAKE_C_FLAGS_RELEASE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_CXX_FLAGS_RELEASE=-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_SHARED_LINKER_FLAGS_RELEASE=-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF .. CMake Warning (dev) at CMakeLists.txt:15 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.12.8") CMake Warning (dev) at CMakeLists.txt:21 (PROJECT): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning (dev) at CMakeLists.txt:30 (INCLUDE): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.31/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:30 (INCLUDE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Configuring done (1.4s) -- Generating done (0.6s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED OPENMM_BUILD_SERIALIZATION_SUPPORT -- Build files have been written to: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.2+dfsg -B/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/depend make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/depend make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/depend make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/depend make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/CMakeFiles/CommonKernels.dir/DependInfo.cmake "--color=" make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python/CMakeFiles/BuildModule.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/CMakeFiles/OpenMM.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/build make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 0%] Generating src/CommonAmoebaKernelSources.cpp, src/CommonAmoebaKernelSources.h [ 0%] Generating src/CommonKernelSources.cpp, src/CommonKernelSources.h [ 0%] Generating src/CommonRpmdKernelSources.cpp, src/CommonRpmdKernelSources.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.h -D KERNEL_SOURCE_CLASS=CommonAmoebaKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.2+dfsg/cmake_modules/EncodeKernelFiles.cmake cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.h -D KERNEL_SOURCE_CLASS=CommonKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.2+dfsg/cmake_modules/EncodeKernelFiles.cmake cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.h -D KERNEL_SOURCE_CLASS=CommonRpmdKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.2+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Generating src/CommonDrudeKernelSources.cpp, src/CommonDrudeKernelSources.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.h -D KERNEL_SOURCE_CLASS=CommonDrudeKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.2+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/MANIFEST.in to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/amd.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/MANIFEST.in /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/amberprmtopfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmpsffile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/amd.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmparameterset.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DLPC.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/amberprmtopfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/checkpointreporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DPPC.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DLPE.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DMPC.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DOPC.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmparameterset.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/POPC.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber03.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/charmmpsffile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/ATMForce.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/POPE.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/checkpointreporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DLPC.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DLPE.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/absinth.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DMPC.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DOPC.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber10.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/DPPC.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/AndersenThermostat.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/POPC.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/POPE.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/ATMForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/absinth.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14-all.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber03.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/AndersenThermostatImpl.cpp [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/AssertionUtilities.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/BrownianIntegrator.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CMAPTorsionForce.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CMAPTorsionForceImpl.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CMMotionRemover.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber10.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CMMotionRemoverImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14-all.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CompiledExpressionSet.cpp [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CompoundIntegrator.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/Context.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/ContextImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomAngleForce.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml [ 4%] Built target RpmdCommonKernels cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber96.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomBondForce.cpp [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCPPForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomBondForceImpl.cpp [ 4%] Built target DrudeCommonKernels cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99Test.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber96.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99Test.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomAngleForceImpl.cpp [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCVForce.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCVForceImpl.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCentroidBondForce.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCentroidBondForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCompoundBondForce.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomCompoundBondForceImpl.cpp [ 6%] Built target CommonKernels [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomExternalForce.cpp [ 6%] Built target AmoebaCommonKernels /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomExternalForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomGBForceImpl.cpp [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amberfb15.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomGBForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sb.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amberfb15.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomHbondForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amber99sb.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomHbondForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomManyParticleForce.cpp [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomManyParticleForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomIntegratorUtilities.cpp [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomNonbondedForce.cpp [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomNonbondedForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomTorsionForce.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/CustomTorsionForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/Force.cpp [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/ForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/hydrogens.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/hydrogens.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/iamoeba.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/iamoeba.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/GBSAOBCForce.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/GBSAOBCForceImpl.cpp [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/GayBerneForce.cpp [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/GayBerneForceImpl.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/opc.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/opc.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/opc3.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/opc3.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/pdbNames.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/pdbNames.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/residues.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/residues.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/HarmonicAngleForce.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/spce.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/spce.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/spce.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/spce.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/test.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/HarmonicAngleForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/test.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3p.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3p.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3p.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3p.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/HarmonicBondForce.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pew.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pew.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip5p.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip5p.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip5p.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/data/tip5p.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/HarmonicBondForceImpl.cpp [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/Integrator.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/dcdfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/dcdfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/dcdreporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/dcdreporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/desmonddmsfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/desmonddmsfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/LangevinIntegrator.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/element.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/element.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/forcefield.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/forcefield.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/LangevinMiddleIntegrator.cpp [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/LocalEnergyMinimizer.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/gromacsgrofile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/gromacsgrofile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/Messages.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/gromacstopfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/gromacstopfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloAnisotropicBarostat.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/argtracker.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/argtracker.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloBarostat.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloBarostatImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/compiled.pyx to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/compiled.pyx /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/customgbforces.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/customgbforces.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloFlexibleBarostat.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloMembraneBarostat.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/NonbondedForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/NonbondedForceImpl.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/NoseHooverChain.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/NoseHooverIntegrator.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/OSRngSeed.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/PeriodicTorsionForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/PeriodicTorsionForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/RBTorsionForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/singleton.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/singleton.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/RBTorsionForceImpl.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/RMSDForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/unitcell.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/unitcell.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/RMSDForceImpl.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/SplineFitter.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/State.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/System.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/TabulatedFunction.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/ThreadPool.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/VariableLangevinIntegrator.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/VariableVerletIntegrator.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/VectorExpression.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/VerletIntegrator.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src/VirtualSite.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx [ 20%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/olla/src/Kernel.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/metadynamics.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/metadynamics.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/metadynamics.py 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/build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/pdbfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbfile.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/pdbreporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/pdbreporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/pdbxfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/pdbxfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/olla/src/KernelImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/olla/src/Platform.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/simulatedtempering.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/simulatedtempering.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/src/quern_factorization.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/src/quern.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/statedatareporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/statedatareporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/simulation.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/simulation.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/src/quern_order.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/topology.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/topology.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/src/quern_solver.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/CompiledExpression.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/xtcfile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/xtcfile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/CompiledVectorExpression.cpp [ 22%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/ExpressionProgram.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/xtcreporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/app/xtcreporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/mtsintegrator.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/mtsintegrator.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/ExpressionTreeNode.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/typemaps.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/typemaps.i [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/Operation.cpp [ 25%] Parsing OpenMM header files with doxygen... cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen && /usr/bin/doxygen [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/ParsedExpression.cpp warning: Tag 'SYMBOL_CACHE_SIZE' at line 289 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 473 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 762 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 817 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1066 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1158 of file 'Doxyfile' has become obsolete. 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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1380 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1504 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/src/Parser.cpp Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/internal Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/OpenMM.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/OpenMM.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/ATMForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/ATMForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Context.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Context.h... Preprocessing /build/reproducible-path/openmm-8.1.2+df[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i sg/openmmapi/include/openmm/CustomAngleForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCompoundBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCompoundBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCVForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCVForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomGBForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomGBForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Force.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Force.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/GayBerneForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/GayBerneForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Integrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Integrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LangevinMiddleIn[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DHAVE_SSE2=1 -MD -MT CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/src/SFMT.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i tegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/OpenMMException.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/OpenMMException.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RMSDForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RMSDForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/State.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/State.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/System.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/System.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Units.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Units.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Vec3.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Vec3.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Parsing file /build/reprodu[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/pythoncode.i to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/pythoncode.i cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/pythoncode.i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/pythoncode.i [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/src/lbfgs.cpp cible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VirtualSite.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VirtualSite.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/olla/include/openmm/Platform.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/olla/include/openmm/Platform.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Preprocessing /build/repr[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/testInstallation.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/testInstallation.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/testInstallation.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/testInstallation.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/__init__.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/src/hilbert.cpp [ 25%] Building CXX object CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/src/SHA1.cpp [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/ReferenceKernelFactory.cpp oducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Parsing file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/olla/include/openmm/Platform.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/OpenMM.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/ATMForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Context.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/CustomCompoundBondFor[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/basedimension.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/basedimension.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/basedimension.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/basedimension.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/baseunit.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/baseunit.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/baseunit.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/baseunit.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/constants.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/constants.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/ReferenceKernels.cpp [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/ReferencePlatform.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/doctests.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/doctests.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/OpenMMException.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/RMSDForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/State.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/System.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Units.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Vec3.h... Generating code for file /build/reproducible-path/openm[ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/ReferencePointFunctions.cpp [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/ReferenceTabulatedFunction.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/mymatrix.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/mymatrix.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/mymatrix.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/mymatrix.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/prefix.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/prefix.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/prefix.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/prefix.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/quantity.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/quantity.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ObcParameters.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/quantity.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/quantity.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/standard_dimensions.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/standard_dimensions.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/standard_dimensions.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/standard_dimensions.py /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit.py m-8.1.2+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/VirtualSite.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Generating code for file /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Generating file documentation... Generating docs for file /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/Units.h... Generating page documentation... Generating docs for page deprecated... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound OpenMM::AmoebaGeneralizedKirkwoodForce... Generating docs for compound OpenMM::AmoebaMultipoleForce... Generating docs for compound OpenMM::AmoebaTorsionTorsionForce... Generating docs for compound OpenMM::AmoebaVdwForce... Generating docs for compound OpenMM::AmoebaWcaDispersionForce... Generating docs for compound OpenMM::AndersenThermostat... Generating docs for compound OpenMM::ATMForce... Generating docs for compound OpenMM::BrownianIntegrator... Generating docs for compound OpenMM::CMAPTorsionForce... Generating docs for compound OpenMM::CMMotionRemover... Generating docs for compound OpenMM::CompoundIntegrator... Generating docs for compound OpenMM::Context... Generating docs for compound OpenMM::Continuous1DFunction... Generating docs for compound OpenMM::Continuous2DFunction... Generating docs for compound OpenMM::Continuous3DFunction... Generating docs for compound OpenMM::CustomAngleForce... Generating docs for compound OpenMM::CustomBondForce... Generating docs for compound OpenMM::CustomCentroidBondForce... Generating docs for compound OpenMM::CustomCompoundBondForce... Generating docs for compound OpenMM::CustomC[ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_definitions.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_definitions.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_math.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_math.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_operators.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/unit/unit_operators.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/vec3.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/openmm/vec3.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/__init__.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/openmm/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/openmm/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/__init__.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/openmm/app/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/openmm/app/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/app/__init__.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/unit/__init__.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/unit/__init__.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/simtk/unit/__init__.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/simtk/unit/__init__.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/doxygen/buildXML.sh to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/doxygen/buildXML.sh cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/src/swig_doxygen/doxygen/buildXML.sh /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/doxygen/buildXML.sh /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAPIUnits.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAPIUnits.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAPIUnits.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAPIUnits.py [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestATMForce.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestATMForce.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestATMForce.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestATMForce.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp VForce... Generating docs for compound OpenMM::CustomExternalForce... Generating docs for compound OpenMM::CustomGBForce... Generating docs for compound OpenMM::CustomHbondForce... Generating docs for compound OpenMM::CustomIntegrator... Generating docs for compound OpenMM::CustomManyParticleForce... Generating docs for compound OpenMM::CustomNonbondedForce... Generating docs for compound OpenMM::CustomTorsionForce... Generating docs for compound OpenMM::Discrete1DFunction... Generating docs for compound OpenMM::Discrete2DFunction... Generating docs for compound OpenMM::Discrete3DFunction... Generating docs for compound OpenMM::DrudeForce... Generating docs for compound OpenMM::DrudeIntegrator... Generating docs for compound OpenMM::DrudeLangevinIntegrator... Generating docs for compound OpenMM::DrudeNoseHooverIntegrator... Generating docs for compound OpenMM::DrudeSCFIntegrator... Generating docs for compound OpenMM::Force... Generating docs for compound OpenMM::GayBerneForce... Generating docs for compound OpenMM::GBSAOBCForce... Generating docs for compound OpenMM::HarmonicAngleForce... Generating docs for compound OpenMM::HarmonicBondForce... Generating docs for compound OpenMM::HippoNonbondedForce... Generating docs for compound OpenMM::Integrator... Generating docs for compound OpenMM::LangevinIntegrator... Generating docs for compound OpenMM::LangevinMiddleIntegrator... Generating docs for compound OpenMM::LocalCoordinatesSite... Generating docs for compound OpenMM::LocalEnergyMinimizer... Generating docs for compound OpenMM::MinimizationReporter... Generating docs for compound OpenMM::MonteCarloAnisotropicBarostat... Generating docs for compound OpenMM::MonteCarloBarostat... Generating docs for compound OpenMM::MonteCarloFlexibleBarostat... Generating docs for compound OpenMM::MonteCarloMembraneBarostat... Generating docs for compound OpenMM::NonbondedForce... Generating docs for compound OpenMM::NoseHooverChain... Generating docs for compound OpenMM::NoseHooverIntegrator... Generating docs for compound OpenMM::OpenMMException... Generating docs for compound OpenMM::OutOfPlaneSite... Generating docs for compound OpenMM::PeriodicTorsionForce... Generating docs for compound OpenMM::Platform... Generating docs for compound OpenMM::RBTorsionForce... Generating docs for compound OpenMM::RMSDForce... Generating docs for compound OpenMM::RPMDIntegrator... Generating docs for compound OpenMM::RPMDMonteCarloBarostat... Generating docs for compound OpenMM::SerializationNode... Generating docs for compound OpenMM::SerializationProxy... Generating docs for compound OpenMM::State... Generating docs for compound OpenMM::System... Generating docs for compound OpenMM::TabulatedFunction... Generating docs for compound OpenMM::ThreeParticleAverageSite... Generating docs for compound OpenMM::TwoParticleAverageSite... Generating docs for compound OpenMM::VariableLangevinIntegrator... Generating docs for compound OpenMM::VariableVerletIntegrator... Generating docs for compound OpenMM::Vec3... Generating docs for compound OpenMM::VerletIntegrator... Generating docs for compound OpenMM::VirtualSite... Generating docs for compound OpenMM::XmlSerializer... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce Generating XML output for class OpenMM::AmoebaMultipoleForce Generating XML output for class OpenMM::AmoebaTorsionTorsionForce Generating XML output for class OpenMM::AmoebaVdwForce Generating XML output for class OpenMM::Am[ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAmberInpcrdFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberInpcrdFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAmberInpcrdFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberInpcrdFile.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAmberPrmtopFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberPrmtopFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestAmberPrmtopFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberPrmtopFile.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestBytes.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestBytes.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestBytes.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestBytes.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp oebaWcaDispersionForce Generating XML output for class OpenMM::AndersenThermostat Generating XML output for class OpenMM::CustomAngleForce::AngleInfo Generating XML output for class OpenMM::HarmonicAngleForce::AngleInfo Generating XML output for class OpenMM::CustomAngleForce::AngleParameterInfo Generating XML output for class OpenMM::ATMForce Generating XML output for class OpenMM::CustomBondForce::BondInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondInfo Generating XML output for class OpenMM::HarmonicBondForce::BondInfo Generating XML output for class OpenMM::CustomBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondParameterInfo Generating XML output for class OpenMM::BrownianIntegrator Generating XML output for class OpenMM::CMAPTorsionForce Generating XML output for class OpenMM::CMAPTorsionForce::CMAPTorsionInfo Generating XML output for class OpenMM::CMMotionRemover Generating XML output for class OpenMM::CompoundIntegrator Generating XML output for class OpenMM::CustomGBForce::ComputationInfo Generating XML output for class OpenMM::CustomIntegrator::ComputationInfo Generating XML output for class OpenMM::CustomNonbondedForce::ComputedValueInfo Generating XML output for class OpenMM::Context Generating XML output for class OpenMM::Continuous1DFunction Generating XML output for class OpenMM::Continuous2DFunction Generating XML output for class OpenMM::Continuous3DFunction Generating XML output for class OpenMM::CustomAngleForce Generating XML output for class OpenMM::CustomBondForce Generating XML output for class OpenMM::CustomCentroidBondForce Generating XML output for class OpenMM::CustomCompoundBondForce Generating XML output for class OpenMM::CustomCVForce Generating XML output for class OpenMM::CustomExternalForce Generating XML output for class OpenMM::CustomGBForce Generating XML output for class OpenMM::CustomHbondForce Generating XML output for class OpenMM::CustomIntegrator Generating XML output for class OpenMM::CustomManyParticleForce Generating XML output for class OpenMM::CustomNonbondedForce Generating XML output for class OpenMM::CustomTorsionForce Generating XML output for class OpenMM::Discrete1DFunction Generating XML output for class OpenMM::Discrete2DFunction Generating XML output for class OpenMM::Discrete3DFunction Generating XML output for class OpenMM::DrudeForce Generating XML output for class OpenMM::DrudeIntegrator Generating XML output for class OpenMM::DrudeLangevinIntegrator Generating XML output for class OpenMM::DrudeNoseHooverIntegrator Generating XML output for class OpenMM::DrudeSCFIntegrator Generating XML output for class OpenMM::GayBerneForce::ExceptionInfo Generating XML output for class OpenMM::HippoNonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionOffsetInfo Generating XML output for class OpenMM::CustomGBForce::ExclusionInfo Generating XML output for class OpenMM::CustomHbondForce::ExclusionInfo Generating XML output for class OpenMM::CustomManyParticleForce::ExclusionInfo Generating XML output for class OpenMM::CustomNonbondedForce::ExclusionInfo Generating XML output for class OpenMM::Force Generating XML output for class OpenMM::CustomCentroidBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCompoundBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCVForce::FunctionInfo Generating XML output for class OpenMM::CustomGBForce::FunctionInfo Generating XML output for class OpenMM::CustomHbondForce::FunctionInfo Generating XML output for class OpenMM::CustomIntegrator::FunctionInfo Generating XML output for class OpenMM::CustomManyParticleForce::FunctionInfo Generating XML output for class OpenMM::CustomNonbondedForce::FunctionInfo Generating XML output for class OpenMM::GayBerneForce Generating XM[ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestCharmmFiles.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestCharmmFiles.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestCheckpointReporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestCheckpointReporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestCheckpointReporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestCheckpointReporter.py L output for class OpenMM::GBSAOBCForce Generating XML output for class OpenMM::ATMForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomAngleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCVForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomExternalForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomGBForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomHbondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomTorsionForce::GlobalParameterInfo Generating XML output for class OpenMM::NonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GroupInfo Generating XML output for class OpenMM::CustomHbondForce::GroupInfo Generating XML output for class OpenMM::HarmonicAngleForce Generating XML output for class OpenMM::HarmonicBondForce Generating XML output for class OpenMM::HippoNonbondedForce Generating XML output for class OpenMM::Integrator Generating XML output for class OpenMM::CustomNonbondedForce::InteractionGroupInfo Generating XML output for class OpenMM::LangevinIntegrator Generating XML output for class OpenMM::LangevinMiddleIntegrator Generating XML output for class OpenMM::LocalCoordinatesSite Generating XML output for class OpenMM::LocalEnergyMinimizer Generating XML output for class OpenMM::CMAPTorsionForce::MapInfo Generating XML output for class OpenMM::MinimizationReporter Generating XML output for class OpenMM::MonteCarloAnisotropicBarostat Generating XML output for class OpenMM::MonteCarloBarostat Generating XML output for class OpenMM::MonteCarloFlexibleBarostat Generating XML output for class OpenMM::MonteCarloMembraneBarostat Generating XML output for class OpenMM::AmoebaMultipoleForce::MultipoleInfo Generating XML output for class OpenMM::NonbondedForce Generating XML output for class OpenMM::NoseHooverChain Generating XML output for class OpenMM::NoseHooverIntegrator Generating XML output for class OpenMM::OpenMMException Generating XML output for class OpenMM::OutOfPlaneSite Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce::ParticleInfo Generating XML output for class OpenMM::ATMForce::ParticleInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleInfo Generating XML output for class OpenMM::CustomGBForce::ParticleInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleInfo Generating XML output for class OpenMM::CustomNonbondedForce::ParticleInfo Generating XML output for class OpenMM::DrudeForce::ParticleInfo Generating XML output for class OpenMM::GayBerneForce::ParticleInfo Generating XML output for class OpenMM::GBSAOBCForce::ParticleInfo Generating XML output for class OpenMM::HippoNonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleOffsetInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleParameterInfo Generating XML output for class OpenMM::AmoebaVdwForce::ParticleTypeInfo Generating XML output for class OpenMM::PeriodicTorsionForce Generating XML output for class OpenMM::PeriodicTorsionForce::PeriodicTorsionInfo Generating XML output for class OpenMM::CustomHbondForce::PerPairParameterInfo Generating XML output for class OpenMM::CustomGBForce::PerParticleParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::PerParticleParameterInfo Generating XML output for class OpenMM::Platform Generating XML output for class OpenMM/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceForce.cpp [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp ::RBTorsionForce Generating XML output for class OpenMM::RBTorsionForce::RBTorsionInfo Generating XML output for class OpenMM::RMSDForce Generating XML output for class OpenMM::RPMDIntegrator Generating XML output for class OpenMM::RPMDMonteCarloBarostat Generating XML output for class OpenMM::DrudeForce::ScreenedPairInfo Generating XML output for class OpenMM::SerializationNode Generating XML output for class OpenMM::SerializationProxy Generating XML output for class OpenMM::State Generating XML output for class OpenMM::State::StateBuilder Generating XML output for class OpenMM::System Generating XML output for class OpenMM::TabulatedFunction Generating XML output for class OpenMM::ThreeParticleAverageSite Generating XML output for class OpenMM::CustomTorsionForce::TorsionInfo Generating XML output for class OpenMM::CustomTorsionForce::TorsionParameterInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionGridInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionInfo Generating XML output for class OpenMM::TwoParticleAverageSite Generating XML output for class OpenMM::AmoebaVdwForce::TypePairInfo Generating XML output for class OpenMM::CustomCVForce::VariableInfo Generating XML output for class OpenMM::VariableLangevinIntegrator Generating XML output for class OpenMM::VariableVerletIntegrator Generating XML output for class OpenMM::AmoebaVdwForce::VdwInfo Generating XML output for class OpenMM::Vec3 Generating XML output for class OpenMM::VerletIntegrator Generating XML output for class OpenMM::VirtualSite Generating XML output for class OpenMM::AmoebaWcaDispersionForce::WcaDispersionInfo Generating XML output for class OpenMM::XmlSerializer Generating XML output for namespace OpenMM Generating XML output for namespace std Generating XML output for file Platform.h Generating XML output for file OpenMM.h Generating XML output for file AndersenThermostat.h Generating XML output for file ATMForce.h Generating XML output for file BrownianIntegrator.h Generating XML output for file CMAPTorsionForce.h Generating XML output for file CMMotionRemover.h Generating XML output for file CompoundIntegrator.h Generating XML output for file Context.h Generating XML output for file CustomAngleForce.h Generating XML output for file CustomBondForce.h Generating XML output for file CustomCentroidBondForce.h Generating XML output for file CustomCompoundBondForce.h Generating XML output for file CustomCVForce.h Generating XML output for file CustomExternalForce.h Generating XML output for file CustomGBForce.h Generating XML output for file CustomHbondForce.h Generating XML output for file CustomIntegrator.h Generating XML output for file CustomManyParticleForce.h Generating XML output for file CustomNonbondedForce.h Generating XML output for file CustomTorsionForce.h Generating XML output for file Force.h Generating XML output for file GayBerneForce.h Generating XML output for file GBSAOBCForce.h Generating XML output for file HarmonicAngleForce.h Generating XML output for file HarmonicBondForce.h Generating XML output for file Integrator.h Generating XML output for file LangevinIntegrator.h Generating XML output for file LangevinMiddleIntegrator.h Generating XML output for file LocalEnergyMinimizer.h Generating XML output for file MonteCarloAnisotropicBarostat.h Generating XML output for file MonteCarloBarostat.h Generating XML output for file MonteCarloFlexibleBarostat.h Generating XML output for file MonteCarloMembraneBarostat.h Generating XML output for file NonbondedForce.h Generating XML output for file NoseHooverChain.h Generating XML output for file NoseHooverIntegrator.h Generating XML output for file OpenMMException.h Generating XML output for file PeriodicTorsionForce.h Generating XML output for file RBTorsionForce.h Generating XML output for file RMSDForce.h Generating XML output for file State.h Generating XML output for file System.h Generating XML output for file TabulatedFunction.h Generating XML output for file Units.h Generating XML output for file VariableLangevinIntegrator.h Generating XML output for file VariableVerletIntegrator.h Generating XML output for file Vec3.h Generating XML output for file VerletIntegrator.h Generating XML output for file VirtualSite.h Generating XML output for file AmoebaGeneralizedKirkwoodForce.h Generating XML output for file AmoebaMultipoleForce.h Generating XML output for file AmoebaTorsionTorsionForce.h Generating XML output for file AmoebaVdwForce.h Generating XML output for file AmoebaWcaDispersionForce.h Generating XML output for file HippoNonbondedForce.h Generating XML output for file OpenMMAmoeba.h Generating XML output for file DrudeForce.h Generating XML output for file DrudeIntegrator.h Generating XML output for file DrudeLangevinIntegrator.h Generating XML output for file DrudeNoseHooverIntegrator.h Generating XML output for file DrudeSCFIntegrator.h Generating XML output for file OpenMMDrude.h Generating XML output for file RPMDIntegrator.h Generating XML output for file RPMDMonteCarloBarostat.h Generating XML output for file SerializationNode.h Generating XML output for file SerializationProxy.h Generating XML output for file XmlSerializer.h Generating XML output for page deprecated Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/olla/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/olla/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/olla/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/serialization/ Generate XML output for dir /build/reproducible-path/openmm-8.1.2+dfsg/serialization/include/openmm/serialization/ Running plantuml with JAVA... type lookup cache used 4851/65536 hits=27856 misses=5087 symbol lookup cache used 5057/65536 hits=48378 misses=5057 finished... [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestDcdFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestDcdFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestDcdFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestDcdFile.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestDesmondDMSFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestDesmondDMSFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestElement.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestElement.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestForceField.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestForceField.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestForceGroups.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestForceGroups.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGenerators.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGenerators.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGromacsGroFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGromacsGroFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGromacsTopFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestGromacsTopFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestIntegrators.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestIntegrators.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestMetadynamics.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestNumpyCompatibility.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestNumpyCompatibility.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestModeller.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestMetadynamics.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestModeller.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPatches.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPatches.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbReporter.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbReporter.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbxFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPdbxFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPickle.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestPickle.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestSimulatedTempering.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestSimulatedTempering.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py [ 33%] CMake-copying file 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/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestSwigWrappers.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestSwigWrappers.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestTopology.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestTopology.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestUnitCell.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestUnitCell.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestUnits.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnits.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestUnits.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnits.py [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestVec3.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestVec3.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestVec3.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestVec3.py [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestXtcFile.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestXtcFile.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/TestXtcFile.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/TestXtcFile.py [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/pytest.ini to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/pytest.ini cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/pytest.ini /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/pytest.ini [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/18protein.parm7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.parm7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/18protein.parm7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.parm7 /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceObc.cpp [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/18protein.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.rst7 /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/18protein.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.rst7 [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/1T2Y.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1T2Y.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/1T2Y.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1T2Y.pdb [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferencePME.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/1ppt.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1ppt.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/2ci2.pdb.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/2ci2.pdb.gro /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.gro [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/2ci2.pdb.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/2ci2.pdb.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/DNA_mbondi3.prmtop to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.prmtop cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/DNA_mbondi3.prmtop /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.prmtop [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/Mg_water.inpcrd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/Mg_water.inpcrd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/Mg_water.inpcrd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/Mg_water.inpcrd [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/Mg_water.prmtop to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/Mg_water.prmtop cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/Mg_water.prmtop /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/Mg_water.prmtop [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.prm cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.prm [ 37%] Building CXX 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/MoS2.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.psf [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/aidilnaaaaa.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/aidilnaaaaa.gro /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/aidilnaaaaa.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.top cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/aidilnaaaaa.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.top [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.crd [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.parm7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.parm7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv_drude.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv_drude.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.crd [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv_drude.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala3_solv_drude.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.psf [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.psf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.vpsf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.vpsf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.vpsf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.vpsf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala_drude.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala_drude.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala_drude.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala_drude.pdb [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.xpsf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.xpsf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ala_ala_ala.xpsf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.xpsf [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-amoeba-forces.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-amoeba-forces.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-amoeba-forces.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-amoeba-forces.xml [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.inpcrd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.inpcrd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.inpcrd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.inpcrd [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.prmtop to 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/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.pdb [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml [ 41%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/ATMForceProxy.cpp [ 41%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/AndersenThermostatProxy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/BrownianIntegratorProxy.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CMAPTorsionForceProxy.cpp [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CMMotionRemoverProxy.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb [ 41%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CompoundIntegratorProxy.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.prmtop to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.prmtop cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.prmtop /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.prmtop [ 41%] CMake-copying file 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/build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/amoeba-ion-in-water.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amoeba-ion-in-water.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bnz.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bnz.gro /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomAngleForceProxy.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bnz.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bnz.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomBondForceProxy.cpp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomCVForceProxy.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bpti.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/bpti.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomCentroidBondForceProxy.cpp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomCompoundBondForceProxy.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm22.par to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm22.par /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm22.rtf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/charmm22.rtf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomExternalForceProxy.cpp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomGBForceProxy.cpp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chl1.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chl1.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomIntegratorProxy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chl1.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chl1.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomHbondForceProxy.cpp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomManyParticleForceProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomNonbondedForceProxy.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd [ 43%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/CustomTorsionForceProxy.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/GBSAOBCForceProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/GayBerneForceProxy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_box.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_box.rst7 [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_box.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_box.rst7 /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/HarmonicAngleForceProxy.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/HarmonicBondForceProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/LangevinIntegratorProxy.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/LangevinMiddleIntegratorProxy.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_vels.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_vels.rst7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_vels.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_vels.rst7 [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o [ 45%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/MonteCarloBarostatProxy.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_vels_box.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_vels_box.rst7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crds_vels_box.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_vels_box.rst7 [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crdsonly.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crdsonly.rst7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/crdsonly.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crdsonly.rst7 [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.crd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.crd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.crd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.crd [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/MonteCarloFlexibleBarostatProxy.cpp [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.psf [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/explicit.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/explicit.top [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/MonteCarloMembraneBarostatProxy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/explicit.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/explicit.top [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff14ipq.parm7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.parm7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff14ipq.parm7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.parm7 [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff14ipq.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.rst7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff14ipq.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.rst7 [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff_with_includes.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ff_with_includes.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/NonbondedForceProxy.cpp [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/formaldehyde.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/formaldehyde.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/formaldehyde.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/formaldehyde.pdb [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/gaffwat.parm7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gaffwat.parm7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/gaffwat.parm7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gaffwat.parm7 [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/NoseHooverIntegratorProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/PeriodicTorsionForceProxy.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/RBTorsionForceProxy.cpp [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/glycopeptide.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/glycopeptide.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/glycopeptide.pdb 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-DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/RMSDForceProxy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/implicit.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/implicit.top [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/improper.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/improper.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/improper.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/improper.psf [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/impropers_ordering_tetrapeptide.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/impropers_ordering_tetrapeptide.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/impropers_ordering_tetrapeptide.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/impropers_ordering_tetrapeptide.pdb [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/insertions.pdbx to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/insertions.pdbx /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ionic.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ionic.gro cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ionic.gro /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ionic.gro [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ionic.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ionic.top cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ionic.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ionic.top [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ions.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ions.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.pdb [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ions.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/ions.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.psf [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/lysozyme-implicit-forces.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit-forces.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/lysozyme-implicit-forces.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit-forces.xml [ 47%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/lysozyme-implicit.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/lysozyme-implicit.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit.pdb [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o [ 47%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/SerializationNode.cpp [ 50%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol-box.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol-box.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/SerializationProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/SerializationProxyRegistration.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol-box.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol-box.pdb [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/StateProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/SystemProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/TabulatedFunctionProxies.cpp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol_ions.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol_ions.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol_ions.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol_ions.pdb [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol_ions.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol_ions.psf cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/methanol_ions.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol_ions.psf [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/multichain.pdbx to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/multichain.pdbx cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/multichain.pdbx /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/multichain.pdbx [ 52%] CMake-copying file 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-I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o -MF 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/VerletIntegratorProxy.cpp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/opc3box.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opc3box.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/XmlSerializer.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/opcbox.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opcbox.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/opcbox.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opcbox.pdb [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all22_prot.inp to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot.inp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all22_prot.inp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot.inp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all22_prot_with_mass.inp to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot_with_mass.inp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all22_prot_with_mass.inp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot_with_mass.inp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_cgenff.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_cgenff.prm [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_cgenff.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_cgenff.prm /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/g_fmt.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/src/irrXML.cpp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_lipid.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_lipid.prm cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_lipid.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_lipid.prm [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/src/vecmath.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64assembler.cpp [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_prot.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_prot.prm cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/par_all36_prot.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_prot.prm [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.prmtop to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.prmtop cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.prmtop /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.prmtop [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/test_amber_ff.xml to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/test_amber_ff.xml [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tip4pew.top to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip4pew.top /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp: In function 'double strtod2(const char*, char**)': /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:2650:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2650 | if (match(&s,"nf")) { | ^~~~ /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:2652:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2652 | if (!match(&s,"inity")) | ^~~~~~~ /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:2661:47: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2661 | if (match(&s, "an")) { | ^~~~ /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp: In function 'char* dtoa(double, int, int, int*, int*, char**)': /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:3725:42: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3725 | return nrv_alloc("Infinity", rve, 8); | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:3727:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3727 | return nrv_alloc("NaN", rve, 3); | ^~~~~ /build/reproducible-path/openmm-8.1.2+dfsg/serialization/src/dtoa.cpp:3735:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3735 | return nrv_alloc("0", rve, 1); | ^~~ cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/test_amber_ff.xml /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/test_amber_ff.xml cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tip4pew.top /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip4pew.top [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tip5p.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64builder.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tip5p.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o [ 52%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64compiler.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64emithelper.cpp [ 54%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64formatter.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64func.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str [ 54%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_drude_master_protein_2013e.str to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_master_protein_2013e.str cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_drude_master_protein_2013e.str /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_master_protein_2013e.str [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64instapi.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64operand.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64instdb.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/a64rapass.cpp [ 54%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_drude_nucleic_acid_2017b.str to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_nucleic_acid_2017b.str cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_drude_nucleic_acid_2017b.str /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_nucleic_acid_2017b.str [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/arm/armformatter.cpp [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_water_ions.str to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_water_ions.str cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/toppar_water_ions.str /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_water_ions.str [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.gro to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.gro /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/archtraits.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.gro /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.gro [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.pdb to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdb cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.pdb /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdb [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/assembler.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/builder.cpp [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.pdbx to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdbx cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/triclinic.pdbx /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdbx [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tz2.truncoct.parm7 to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.parm7 /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/codeholder.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/tz2.truncoct.parm7 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.parm7 [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/codewriter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/compiler.cpp [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water-box-216.prmtop to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water-box-216.prmtop cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water-box-216.prmtop /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water-box-216.prmtop [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water_methanol.psf to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.psf [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water_methanol.psf /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.psf [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water_methanol.prm to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.prm /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/constpool.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/cpuinfo.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/systems/water_methanol.prm /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.prm /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/emithelper.cpp [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/validateConstraints.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/validateConstraints.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/validateConstraints.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/validateConstraints.py [ 56%] CMake-copying file /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/validateModeller.py to /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/validateModeller.py cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.2+dfsg/wrappers/python/tests/validateModeller.py /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/validateModeller.py [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/emitter.cpp [ 56%] Creating OpenMM Python swig input files... cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/python3 /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py -i /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen/xml -c swigInputConfig.py -d OpenMM_docstring.i -o OpenMMSwigHeaders.i -a swig_lib/python/pythonprepend.i -z swig_lib/python/pythonappend.i -v 4.2.1 [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/emitterutils.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/environment.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/errorhandler.cpp /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py:53: SyntaxWarning: invalid escape sequence '\s' s = re.sub('\s*(\s*)', replace_ul_tags, s, flags=re.MULTILINE | re.DOTALL) [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include 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/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/formatter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/globals.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/jitallocator.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/jitruntime.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/logger.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/operand.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/osutils.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/ralocal.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/rapass.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/rastack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/string.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/support.cpp Integrator.getStepSize() returns unit.picosecond LangevinMiddleIntegrator.getTemperature() returns unit.kelvin LangevinMiddleIntegrator.getFriction() returns unit.picosecond**-1 BrownianIntegrator.getTemperature() returns unit.kelvin BrownianIntegrator.getFriction() returns unit.picosecond**-1 DrudeIntegrator.getDrudeTemperature() returns unit.kelvin DrudeIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeLangevinIntegrator.getTemperature() returns unit.kelvin DrudeLangevinIntegrator.getFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.getDrudeFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.computeSystemTemperature() returns unit.kelvin DrudeLangevinIntegrator.computeDrudeTemperature() returns unit.kelvin NonbondedForce.getCutoffDistance() returns unit.nanometers NonbondedForce.getSwitchingDistance() returns unit.nanometers NonbondedForce.getPMEParameters() returns alpha as unit.nanometer**-1 NonbondedForce.getPMEParameters() returns nx as None NonbondedForce.getPMEParameters() returns ny as None NonbondedForce.getPMEParameters() returns nz as None NonbondedForce.getParticleParameters() returns charge as unit.elementary_charge NonbondedForce.getParticleParameters() returns sigma as unit.nanometer NonbondedForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole NonbondedForce.getExceptionParameters() returns particle1 as None NonbondedForce.getExceptionParameters() returns particle2 as None NonbondedForce.getExceptionParameters() returns chargeProd as unit.elementary_charge*unit.elementary_charge NonbondedForce.getExceptionParameters() returns sigma as unit.nanometer NonbondedForce.getExceptionParameters() returns epsilon as unit.kilojoule_per_mole CustomNonbondedForce.getCutoffDistance() returns unit.nanometers CustomNonbondedForce.getSwitchingDistance() returns unit.nanometers RPMDMonteCarloBarostat.getDefaultPressure() returns unit.bar AmoebaMultipoleForce.getCutoffDistance() returns unit.nanometer AmoebaMultipoleForce.getAEwald() returns 1/unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns charge as unit.elementary_charge AmoebaMultipoleForce.getMultipoleParameters() returns molecularDipole as unit.elementary_charge*unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns molecularQuadrupole as unit.elementary_charge*unit.nanometer**2 AmoebaMultipoleForce.getMultipoleParameters() returns axisType as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomZ as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomX as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomY as None AmoebaMultipoleForce.getMultipoleParameters() returns thole as None AmoebaMultipoleForce.getMultipoleParameters() returns dampingFactor as None AmoebaMultipoleForce.getMultipoleParameters() returns polarity as unit.nanometer**3 NoseHooverIntegrator.getTemperature() returns unit.kelvin NoseHooverIntegrator.getRelativeTemperature() returns unit.kelvin NoseHooverIntegrator.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.getRelativeCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.computeHeatBathEnergy() returns unit.kilojoules_per_mole NoseHooverIntegrator.getMaximumPairDistance() returns unit.nanometer DrudeNoseHooverIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeNoseHooverIntegrator.computeSystemTemperature() returns unit.kelvin DrudeNoseHooverIntegrator.computeDrudeTemperature() returns unit.kelvin MonteCarloFlexibleBarostat.getDefaultPressure() returns unit.bar MonteCarloFlexibleBarostat.getDefaultTemperature() returns unit.kelvin RMSDForce.getReferencePositions() returns unit.nanometer System.getParticleMass() returns unit.amu System.getConstraintParameters() returns particle1 as None System.getConstraintParameters() returns particle2 as None System.getConstraintParameters() returns distance as unit.nanometer System.getDefaultPeriodicBoxVectors() returns a as unit.nanometer System.getDefaultPeriodicBoxVectors() returns b as unit.nanometer System.getDefaultPeriodicBoxVectors() returns c as unit.nanometer MonteCarloMembraneBarostat.getDefaultPressure() returns unit.bar MonteCarloMembraneBarostat.getDefaultSurfaceTension() returns unit.bar*unit.nanometer MonteCarloMembraneBarostat.getDefaultTemperature() returns unit.kelvin LangevinIntegrator.getTemperature() returns unit.kelvin LangevinIntegrator.getFriction() returns unit.picosecond**-1 AndersenThermostat.getDefaultTemperature() returns unit.kelvin AndersenThermostat.getDefaultCollisionFrequency() returns unit.picosecond**-1 VariableVerletIntegrator.getMaximumStepSize() returns unit.picosecond CustomGBForce.getCutoffDistance() returns unit.nanometers LocalCoordinatesSite.getLocalPosition() returns unit.nanometer MonteCarloAnisotropicBarostat.getDefaultPressure() returns unit.bar MonteCarloAnisotropicBarostat.getDefaultTemperature() returns unit.kelvin AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns charge as unit.elementary_charge AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns radius as unit.nanometer AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns scalingFactor as None AmoebaGeneralizedKirkwoodForce.getProbeRadius() returns unit.nanometer AmoebaGeneralizedKirkwoodForce.getSurfaceAreaFactor() returns unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) HarmonicAngleForce.getAngleParameters() returns particle1 as None HarmonicAngleForce.getAngleParameters() returns particle2 as None HarmonicAngleForce.getAngleParameters() returns particle3 as None HarmonicAngleForce.getAngleParameters() returns angle as unit.radian HarmonicAngleForce.getAngleParameters() returns k as unit.kilojoule_per_mole/(unit.radian*unit.radian) VariableLangevinIntegrator.getTemperature() returns unit.kelvin VariableLangevinIntegrator.getFriction() returns unit.picosecond**-1 VariableLangevinIntegrator.getMaximumStepSize() returns unit.picosecond GayBerneForce.getCutoffDistance() returns unit.nanometers GayBerneForce.getSwitchingDistance() returns unit.nanometers GayBerneForce.getParticleParameters() returns sigma as unit.nanometer GayBerneForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole GayBerneForce.getParticleParameters() returns xparticle as None GayBerneForce.getParticleParameters() returns yparticle as None GayBerneForce.getParticleParameters() returns sx as unit.nanometer GayBerneForce.getParticleParameters() returns sy as unit.nanometer GayBerneForce.getParticleParameters() returns sz as unit.nanometer GayBerneForce.getParticleParameters() returns ex as None GayBerneForce.getParticleParameters() returns ey as None GayBerneForce.getParticleParameters() returns ez as None HarmonicBondForce.getBondParameters() returns particle1 as None HarmonicBondForce.getBondParameters() returns particle2 as None HarmonicBondForce.getBondParameters() returns length as unit.nanometer HarmonicBondForce.getBondParameters() returns k as unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) RBTorsionForce.getTorsionParameters() returns particle1 as None RBTorsionForce.getTorsionParameters() returns particle2 as None RBTorsionForce.getTorsionParameters() returns particle3 as None RBTorsionForce.getTorsionParameters() returns particle4 as None RBTorsionForce.getTorsionParameters() returns c0 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c1 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c2 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c3 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c4 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c5 as unit.kilojoules_per_mole Context.getTime() returns unit.picosecond CMAPTorsionForce.getMapParameters() returns size as None CMAPTorsionForce.getMapParameters() returns energy as unit.kilojoule_per_mole RPMDIntegrator.getTemperature() returns unit.kelvin RPMDIntegrator.getFriction() returns unit.picosecond**-1 RPMDIntegrator.getTotalEnergy() returns unit.kilojoules_per_mole DrudeSCFIntegrator.getMinimizationErrorTolerance() returns unit.kilojoules_per_mole/unit.nanometer [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o [ 58%] Building 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/type.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/virtmem.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zone.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zonehash.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zonelist.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o PeriodicTorsionForce.getTorsionParameters() returns particle1 as None PeriodicTorsionForce.getTorsionParameters() returns particle2 as None PeriodicTorsionForce.getTorsionParameters() returns particle3 as None PeriodicTorsionForce.getTorsionParameters() returns particle4 as None PeriodicTorsionForce.getTorsionParameters() returns periodicity as None PeriodicTorsionForce.getTorsionParameters() returns phase as unit.radian PeriodicTorsionForce.getTorsionParameters() returns k as unit.kilojoule_per_mole State.getTime() returns unit.picosecond State.getKineticEnergy() returns unit.kilojoules_per_mole State.getPotentialEnergy() returns unit.kilojoules_per_mole State.getPeriodicBoxVectors() returns unit.nanometers State.getPeriodicBoxVolume() returns unit.nanometers**3 DrudeForce.getParticleParameters() returns particle as None DrudeForce.getParticleParameters() returns particle1 as None DrudeForce.getParticleParameters() returns particle2 as None DrudeForce.getParticleParameters() returns particle3 as None DrudeForce.getParticleParameters() returns particle4 as None DrudeForce.getParticleParameters() returns charge as unit.elementary_charge DrudeForce.getParticleParameters() returns polarizability as unit.nanometer**3 DrudeForce.getParticleParameters() returns aniso12 as None DrudeForce.getParticleParameters() returns aniso34 as None MonteCarloBarostat.getDefaultPressure() returns unit.bar MonteCarloBarostat.getDefaultTemperature() returns unit.kelvin ATMForce.getParticleParameters() returns displacement1 as unit.nanometer ATMForce.getParticleParameters() returns displacement0 as unit.nanometer ATMForce.getPerturbationEnergy() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getParticleParameters() returns radius as unit.nanometer AmoebaWcaDispersionForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpso() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpsh() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getRmino() returns unit.nanometer AmoebaWcaDispersionForce.getRminh() returns unit.nanometer AmoebaWcaDispersionForce.getAwater() returns 1/(unit.nanometer*unit.nanometer*unit.nanometer) AmoebaWcaDispersionForce.getDispoff() returns unit.nanometer CompoundIntegrator.getStepSize() returns unit.picosecond CustomManyParticleForce.getCutoffDistance() returns unit.nanometers CustomHbondForce.getCutoffDistance() returns unit.nanometers AmoebaVdwForce.getParticleParameters() returns parentIndex as None AmoebaVdwForce.getParticleParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getParticleParameters() returns reductionFactor as None AmoebaVdwForce.getParticleParameters() returns isAlchemical as None AmoebaVdwForce.getParticleParameters() returns typeIndex as None AmoebaVdwForce.getParticleTypeParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleTypeParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getTypePairParameters() returns type1 as None AmoebaVdwForce.getTypePairParameters() returns type2 as None AmoebaVdwForce.getTypePairParameters() returns sigma as unit.nanometer AmoebaVdwForce.getTypePairParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getCutoffDistance() returns unit.nanometers AmoebaVdwForce.getCutoff() returns unit.nanometer NoseHooverChain.getTemperature() returns unit.kelvin NoseHooverChain.getRelativeTemperature() returns unit.kelvin NoseHooverChain.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverChain.getRelativeCollisionFrequency() returns unit.picosecond**-1 HippoNonbondedForce.getCutoffDistance() returns unit.nanometers HippoNonbondedForce.getSwitchingDistance() returns unit.nanometers HippoNonbondedForce.getParticleParameters() returns charge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns dipole as unit.elementary_charge*unit.nanometer HippoNonbondedForce.getParticleParameters() returns quadrupole as unit.elementary_charge*unit.nanometer**2 HippoNonbondedForce.getParticleParameters() returns coreCharge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns alpha as None HippoNonbondedForce.getParticleParameters() returns epsilon as None HippoNonbondedForce.getParticleParameters() returns damping as None HippoNonbondedForce.getParticleParameters() returns c6 as None HippoNonbondedForce.getParticleParameters() returns pauliK as None HippoNonbondedForce.getParticleParameters() returns pauliQ as None HippoNonbondedForce.getParticleParameters() returns pauliAlpha as None HippoNonbondedForce.getParticleParameters() returns polarizability as None HippoNonbondedForce.getParticleParameters() returns axisType as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomZ as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomX as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomY as None GBSAOBCForce.getParticleParameters() returns charge as unit.elementary_charge GBSAOBCForce.getParticleParameters() returns radius as unit.nanometer GBSAOBCForce.getParticleParameters() returns scalingFactor as None GBSAOBCForce.getSurfaceAreaEnergy() returns unit.kilojoule_per_mole/unit.nanometer/unit.nanometer GBSAOBCForce.getCutoffDistance() returns unit.nanometers /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zonestack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zonetree.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/core/zonevector.cpp [ 58%] Creating OpenMM Python module sources with swig... cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/swig -python -c++ -outdir /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm -o OpenMMSwig.cxx OpenMM.i [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86builder.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86emithelper.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86formatter.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86func.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86instapi.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86instdb.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86operand.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit/asmjit/x86/x86rapass.cpp OpenMMSwigHeaders.i:2417: Warning 314: 'None' is a python keyword, renaming to '_None' OpenMMSwigHeaders.i:497: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:502: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:505: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:554: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:674: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:837: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:874: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:966: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1005: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1138: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1141: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1144: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1150: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1155: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1191: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1229: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1298: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1502: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1608: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1632: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1670: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1704: Warning 453: Can't apply (OpenMM::SerializationNode &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1764: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1786: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1821: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1948: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2017: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2091: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2163: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2167: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2190: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2290: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2376: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2487: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2640: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2643: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2646: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2681: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2684: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. ./swig_lib/python/extend.i:414: Warning 509: Overloaded method OpenMM::CustomIntegrator::getPerDofVariable(int) const effectively ignored, OpenMMSwigHeaders.i:2682: Warning 509: as it is shadowed by OpenMM::CustomIntegrator::getPerDofVariable(int,std::vector< Vec3,std::allocator< Vec3 > > &) const. OpenMMSwigHeaders.i:2738: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2739: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2821: Warning 453: Can't apply (OpenMM::Context &OUTPUT). 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CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/cmake -E cmake_symlink_library libOpenMM.so.8.1 libOpenMM.so.8.1 libOpenMM.so make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target OpenMM make -f platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build.make 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platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 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make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests 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directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E 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/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 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platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -MF CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o.d -o CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceATMForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -MF CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o.d -o CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceBrownianIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCMAPTorsionForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -MF CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceAndersenThermostat.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -MF CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCompoundIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -MF CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o.d -o CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCheckpoints.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -MF CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o.d -o CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCMMotionRemover.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -MF CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomCPPForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomCompoundBondForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -MF CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomCVForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomBondForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -MF CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o.d -o CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomExternalForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -MF CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o.d -o CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomGBForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomCentroidBondForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -MF CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomManyParticleForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -MF CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomHbondForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomTorsionForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomNonbondedForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -MF CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o.d -o CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceEwald.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -MF CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o.d -o CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceGBSAOBCForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -MF CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomAngleForce.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -MF CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o.d -o CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceDispersionPME.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceHarmonicBondForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -MF CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceCustomIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceMonteCarloAnisotropicBarostat.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceHarmonicAngleForce.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -MF CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o.d -o CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceKineticEnergy.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceLangevinMiddleIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceLangevinIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceMonteCarloBarostat.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceMonteCarloMembraneBarostat.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -MF CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o.d -o CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceLocalEnergyMinimizer.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -MF CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o.d -o CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceNeighborList.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceNonbondedForce.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceNoseHooverIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferencePeriodicTorsionForce.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -MF CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o.d -o CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceGayBerneForce.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceMonteCarloFlexibleBarostat.cpp [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -MF CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceRBTorsionForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -MF CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o.d -o CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceRandom.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -MF CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o.d -o CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceRMSDForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -MF CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o.d -o CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceSettle.cpp [ 64%] Linking CXX executable ../../../TestReferenceNeighborList [ 64%] Linking CXX executable ../../../TestReferenceKineticEnergy cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNeighborList.dir/link.txt --verbose=1 [ 64%] Linking CXX executable ../../../TestReferenceSettle cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceKineticEnergy.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceSettle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceNeighborList.dir/link.d CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -o ../../../TestReferenceNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceSettle.dir/link.d CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -o ../../../TestReferenceSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceKineticEnergy.dir/link.d CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -o ../../../TestReferenceKineticEnergy -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceNeighborList make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/depend [ 64%] Built target TestReferenceSettle make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/DependInfo.cmake "--color=" [ 64%] Built target TestReferenceKineticEnergy make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/DependInfo.cmake "--color=" [ 64%] Linking CXX executable ../../../TestReferenceRandom cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRandom.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Linking CXX executable ../../../TestReferenceCMMotionRemover cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMMotionRemover.dir/link.txt --verbose=1 [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceVariableLangevinIntegrator.cpp [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceVariableVerletIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceVerletIntegrator.cpp [ 64%] Linking CXX executable ../../../TestReferenceAndersenThermostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAndersenThermostat.dir/link.txt --verbose=1 [ 64%] Linking CXX executable ../../../TestReferenceMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCMMotionRemover.dir/link.d CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -o ../../../TestReferenceCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAndersenThermostat.dir/link.d CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -o ../../../TestReferenceAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceAndersenThermostat [ 64%] Built target TestReferenceCMMotionRemover make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/DependInfo.cmake "--color=" make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Generating ../src/OpenCLKernelSources.cpp, ../src/OpenCLKernelSources.h cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.h -D KERNEL_SOURCE_CLASS=OpenCLKernelSources -D KERNEL_FILE_EXTENSION=cl -P /build/reproducible-path/openmm-8.1.2+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -MF CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o.d -o CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests/TestReferenceVirtualSites.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceRandom.dir/link.d CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -o ../../../TestReferenceRandom -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/link.d CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -o ../../../TestReferenceMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceMonteCarloMembraneBarostat make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/DependInfo.cmake "--color=" [ 64%] Linking CXX executable ../../../TestReferenceRMSDForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRMSDForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o [ 64%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuBondForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLArray.cpp [ 64%] Linking CXX executable ../../../TestReferenceMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 [ 66%] Linking CXX executable ../../../TestReferenceCheckpoints cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCheckpoints.dir/link.txt --verbose=1 [ 66%] Built target TestReferenceRandom make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/link.d CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -o ../../../TestReferenceMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceRMSDForce.dir/link.d CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -o ../../../TestReferenceRMSDForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceRMSDForce [ 66%] Built target TestReferenceMonteCarloFlexibleBarostat make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/DependInfo.cmake "--color=" [ 66%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 66%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp [ 66%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/src/RPMDIntegrator.cpp [ 66%] Linking CXX executable ../../../TestReferenceHarmonicBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicBondForce.dir/link.txt --verbose=1 [ 66%] Linking CXX executable ../../../TestReferenceCustomCPPForce [ 66%] Linking CXX executable ../../../TestReferenceBrownianIntegrator [ 66%] Linking CXX executable ../../../TestReferenceHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCPPForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicAngleForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceBrownianIntegrator.dir/link.txt --verbose=1 [ 66%] Linking CXX executable ../../../TestReferenceCMAPTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMAPTorsionForce.dir/link.txt --verbose=1 [ 66%] Linking CXX executable ../../../TestReferenceMonteCarloAnisotropicBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCheckpoints.dir/link.d CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -o ../../../TestReferenceCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 66%] Linking CXX executable ../../../TestReferenceMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloBarostat.dir/link.txt --verbose=1 [ 66%] Built target TestReferenceCheckpoints /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomCPPForce.dir/link.d CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -o ../../../TestReferenceCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceHarmonicBondForce.dir/link.d CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -o ../../../TestReferenceHarmonicBondForce -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceBrownianIntegrator.dir/link.d CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -o ../../../TestReferenceBrownianIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceHarmonicAngleForce.dir/link.d CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -o ../../../TestReferenceHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostat.cpp [ 68%] Built target TestReferenceCustomCPPForce [ 68%] Built target TestReferenceHarmonicBondForce make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/depend [ 68%] Built target TestReferenceBrownianIntegrator make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/CMakeFiles/OpenMMDrude.dir/DependInfo.cmake "--color=" [ 68%] Linking CXX executable ../../../TestReferencePeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferencePeriodicTorsionForce.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceHarmonicAngleForce [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLBondedUtilities.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/link.d CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -o ../../../TestReferenceMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCMAPTorsionForce.dir/link.d CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -o ../../../TestReferenceCMAPTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCMAPTorsionForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceMonteCarloBarostat.dir/link.d CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -o ../../../TestReferenceMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLCompact.cpp [ 68%] Built target TestReferenceMonteCarloBarostat [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLContext.cpp [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomGBForce.cpp [ 68%] Built target TestReferenceMonteCarloAnisotropicBarostat [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeForceImpl.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferencePeriodicTorsionForce.dir/link.d CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -o ../../../TestReferencePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferencePeriodicTorsionForce [ 68%] Linking CXX executable ../../../TestReferenceRBTorsionForce [ 68%] Linking CXX executable ../../../TestReferenceLangevinMiddleIntegrator [ 68%] Linking CXX executable ../../../TestReferenceLangevinIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinIntegrator.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRBTorsionForce.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferenceGayBerneForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGayBerneForce.dir/link.txt --verbose=1 [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForce.cpp [ 68%] Linking CXX executable ../../../TestReferenceGBSAOBCForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGBSAOBCForce.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferenceLocalEnergyMinimizer cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceGBSAOBCForce.dir/link.d CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -o ../../../TestReferenceGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/link.d CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -o ../../../TestReferenceLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/link.d CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -o ../../../TestReferenceLocalEnergyMinimizer -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceGayBerneForce.dir/link.d CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -o ../../../TestReferenceGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceRBTorsionForce.dir/link.d CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -o ../../../TestReferenceRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceLangevinIntegrator.dir/link.d CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -o ../../../TestReferenceLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceCustomExternalForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomExternalForce.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceLocalEnergyMinimizer [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o [ 68%] Built target TestReferenceLangevinMiddleIntegrator [ 68%] Built target TestReferenceGBSAOBCForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp [ 68%] Built target TestReferenceGayBerneForce [ 68%] Built target TestReferenceLangevinIntegrator [ 68%] Built target TestReferenceRBTorsionForce [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLEvent.cpp [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomManyParticleForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomNonbondedForce.cpp [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomNonbondedForceAvx.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeHelpers.cpp make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/CMakeFiles/OpenMMPME.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLIntegrationUtilities.cpp [ 68%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/src/CpuPmeKernelFactory.cpp [ 68%] Linking CXX executable ../../../TestReferenceCustomAngleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomExternalForce.dir/link.d CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -o ../../../TestReferenceCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCustomExternalForce [ 68%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/src/CpuPmeKernels.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomAngleForce.dir/link.d CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -o ../../../TestReferenceCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' In file included from /usr/include/CL/cl.h:20, from /build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include/vkFFT.h:57, from /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include/OpenCLFFT3D.h:35, from /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp:27: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 68%] Built target TestReferenceCustomAngleForce [ 68%] Linking CXX executable ../../../TestReferenceCustomTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomTorsionForce.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferenceCustomCVForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCVForce.dir/link.txt --verbose=1 [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLKernel.cpp [ 68%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeIntegrator.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomCVForce.dir/link.d CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -o ../../../TestReferenceCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomTorsionForce.dir/link.d CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -o ../../../TestReferenceCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceCustomBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomBondForce.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceCustomCVForce [ 68%] Built target TestReferenceCustomTorsionForce [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeLangevinIntegrator.cpp [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLKernelFactory.cpp [ 68%] Linking CXX executable ../../../TestReferenceCompoundIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCompoundIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomBondForce.dir/link.d CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -o ../../../TestReferenceCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCustomBondForce [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLKernels.cpp [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeNoseHooverIntegrator.cpp make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/depend [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializationNode.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/src/DrudeSCFIntegrator.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCompoundIntegrator.dir/link.d CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -o ../../../TestReferenceCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceVariableLangevinIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCompoundIntegrator [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -MF CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o.d -o CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializationNode.cpp [ 70%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLNonbondedUtilities.cpp [ 70%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLParallelKernels.cpp [ 70%] Linking CXX executable ../../../TestReferenceVerletIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVerletIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/link.d CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -o ../../../TestReferenceVariableLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestReferenceVariableLangevinIntegrator [ 70%] Linking CXX executable ../../../TestReferenceVariableVerletIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableVerletIntegrator.dir/link.txt --verbose=1 [ 70%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomNonbondedForceFvec.cpp [ 70%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceVerletIntegrator.dir/link.d CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -o ../../../TestReferenceVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuCustomNonbondedForceVec4.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../../TestReferenceCustomHbondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomHbondForce.dir/link.txt --verbose=1 [ 72%] Built target TestReferenceVerletIntegrator [ 72%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuGBSAOBCForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceVariableVerletIntegrator.dir/link.d CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -o ../../../TestReferenceVariableVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceVariableVerletIntegrator [ 72%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLParameterSet.cpp [ 72%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLPlatform.cpp [ 72%] Linking CXX executable ../../../TestReferenceNoseHooverIntegrator make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/depend cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNoseHooverIntegrator.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeATMForce.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomHbondForce.dir/link.d CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -o ../../../TestReferenceCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceCustomHbondForce [ 72%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuGayBerneForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -MF CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o.d -o CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeATMForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -MF CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o.d -o CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeAndersenThermostat.cpp [ 72%] Linking CXX executable ../../../TestReferenceCustomCentroidBondForce make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/depend cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCentroidBondForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/DependInfo.cmake "--color=" [ 72%] Linking CXX executable ../../../TestReferenceCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomManyParticleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceNoseHooverIntegrator.dir/link.d CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -o ../../../TestReferenceNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/DependInfo.cmake "--color=" [ 72%] Built target TestReferenceNoseHooverIntegrator [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -MF CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o.d -o CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCMAPTorsion.cpp [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -MF CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o.d -o CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCMMotionRemover.cpp [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomManyParticleForce.dir/link.d CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -o ../../../TestReferenceCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceCustomManyParticleForce [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/src/DrudeForceProxy.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomCentroidBondForce.dir/link.d CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -o ../../../TestReferenceCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceCustomCentroidBondForce [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/src/DrudeLangevinIntegratorProxy.cpp [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/src/DrudeNoseHooverIntegratorProxy.cpp [ 72%] Linking CXX executable ../../../TestReferenceATMForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceATMForce.dir/link.txt --verbose=1 [ 72%] Linking CXX executable ../../../TestReferenceCustomGBForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomGBForce.dir/link.txt --verbose=1 [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/src/DrudeSerializationProxyRegistration.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomGBForce.dir/link.d CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -o ../../../TestReferenceCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceCustomGBForce [ 72%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLProgram.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceATMForce.dir/link.d CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -o ../../../TestReferenceATMForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceATMForce [ 72%] Linking CXX executable ../../../TestReferenceCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCompoundBondForce.dir/link.txt --verbose=1 [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -MF CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomAngleForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomCompoundBondForce.dir/link.d CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -o ../../../TestReferenceCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/DependInfo.cmake "--color=" [ 72%] Built target TestReferenceCustomCompoundBondForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src/OpenCLSort.cpp [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomBondForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/DependInfo.cmake "--color=" make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -MF CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomCVForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../TestSerializeAndersenThermostat make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/depend cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeAndersenThermostat.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/DependInfo.cmake "--color=" [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomCentroidBondForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomCompoundBondForce.cpp [ 72%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuKernelFactory.cpp [ 72%] Linking CXX executable ../../TestSerializationNode cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializationNode.dir/link.txt --verbose=1 [ 72%] Linking CXX executable ../../TestSerializeCMMotionRemover cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMMotionRemover.dir/link.txt --verbose=1 [ 72%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuKernels.cpp [ 72%] Linking CXX executable ../../../TestReferenceNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeAndersenThermostat.dir/link.d CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -o ../../TestSerializeAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeAndersenThermostat [ 72%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuLangevinDynamics.cpp [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceNonbondedForce.dir/link.d CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -o ../../../TestReferenceNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializationNode.dir/link.d CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -o ../../TestSerializationNode -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target TestReferenceNonbondedForce [ 75%] Built target TestSerializationNode [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForceImpl.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCMMotionRemover.dir/link.d CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -o ../../TestSerializeCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp [ 75%] Built target TestSerializeCMMotionRemover [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaMultipoleForceProxy.cpp [ 75%] Linking CXX shared library ../../libOpenMMRPMD.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMD.dir/link.txt --verbose=1 make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/DependInfo.cmake "--color=" [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaSerializationProxyRegistration.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -MF CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o.d -o CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomExternalForce.cpp /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMRPMD.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMD.so -o ../../libOpenMMRPMD.so CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target OpenMMRPMD [ 77%] Linking CXX shared library ../../libOpenMMDrude.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrude.dir/link.txt --verbose=1 [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaTorsionTorsionForceProxy.cpp /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMDrude.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrude.so -o ../../libOpenMMDrude.so CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o [ 77%] Built target OpenMMDrude cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaVdwForceProxy.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/AmoebaWcaDispersionForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 77%] Linking CXX executable ../../../TestReferenceVirtualSites cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVirtualSites.dir/link.txt --verbose=1 [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -MF CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o.d -o CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomGBForce.cpp [ 77%] Linking CXX executable ../../TestSerializeCMAPTorsion cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMAPTorsion.dir/link.txt --verbose=1 [ 77%] Linking CXX executable ../../../TestReferenceDispersionPME cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDispersionPME.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceVirtualSites.dir/link.d CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -o ../../../TestReferenceVirtualSites -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestReferenceVirtualSites make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/src/HippoNonbondedForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -MF CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomHbondForce.cpp [ 79%] Linking CXX executable ../../TestSerializeATMForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeATMForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCMAPTorsion.dir/link.d CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -o ../../TestSerializeCMAPTorsion -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/DependInfo.cmake "--color=" [ 79%] Built target TestSerializeCMAPTorsion make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceDispersionPME.dir/link.d CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -o ../../../TestReferenceDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/CommonKernels.cpp [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/ComputeArray.cpp [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o [ 79%] Built target TestReferenceDispersionPME cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -MF CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomManyParticleForce.cpp [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/ComputeContext.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeATMForce.dir/link.d CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -o ../../TestSerializeATMForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeATMForce [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/ComputeForceInfo.cpp [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/ComputeParameterSet.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/ExpressionUtilities.cpp [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomNonbondedForce.cpp [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/src/IntegrationUtilities.cpp [ 79%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuLangevinMiddleDynamics.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/depend [ 79%] Linking CXX executable ../../TestSerializeCustomCVForce make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCVForce.dir/link.txt --verbose=1 [ 79%] Linking CXX executable ../../TestSerializeCustomBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomBondForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 79%] Linking CXX executable ../../TestSerializeCustomAngleForce [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomAngleForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -MF CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeCustomTorsionForce.cpp [ 79%] Linking CXX executable ../../TestSerializeCustomExternalForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomExternalForce.dir/link.txt --verbose=1 [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -MF CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o.d -o CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeGBSAOBCForce.cpp [ 79%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNeighborList.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomBondForce.dir/link.d CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -o ../../TestSerializeCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomCVForce.dir/link.d CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -o ../../TestSerializeCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeCustomBondForce [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp [ 79%] Built target TestSerializeCustomCVForce [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNonbondedForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomAngleForce.dir/link.d CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -o ../../TestSerializeCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeCustomAngleForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomExternalForce.dir/link.d CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -o ../../TestSerializeCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Linking CXX executable ../../TestSerializeCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCompoundBondForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp [ 81%] Built target TestSerializeCustomExternalForce make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/DependInfo.cmake "--color=" [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -MF CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o.d -o CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeGayBerneForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/DependInfo.cmake "--color=" [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeHarmonicAngleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeHarmonicBondForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomCompoundBondForce.dir/link.d CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -o ../../TestSerializeCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeCustomCompoundBondForce [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNonbondedForceAvx.cpp [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx2 -mfma -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNonbondedForceAvx2.cpp [ 81%] Linking CXX executable ../../../TestReferenceCustomIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomIntegrator.dir/link.txt --verbose=1 [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNonbondedForceFvec.cpp [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuNonbondedForceVec4.cpp make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/DependInfo.cmake "--color=" [ 81%] Linking CXX executable ../../TestSerializeCustomCentroidBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCentroidBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomIntegrator.dir/link.d CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -o ../../../TestReferenceCustomIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestReferenceCustomIntegrator [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuPlatform.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -MF CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o.d -o CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeIntegrator.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomCentroidBondForce.dir/link.d CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -o ../../TestSerializeCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeCustomCentroidBondForce [ 81%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuRandom.cpp [ 81%] Linking CXX shared library ../../libOpenMMAmoeba.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoeba.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMAmoeba.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoeba.so -o ../../libOpenMMAmoeba.so CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target OpenMMAmoeba [ 83%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeMonteCarloAnisotropicBarostat.cpp [ 83%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src/CpuSETTLE.cpp [ 83%] Linking CXX executable ../../../TestReferenceCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomNonbondedForce.dir/link.txt --verbose=1 make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 83%] Linking CXX executable ../../TestSerializeGBSAOBCForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeMonteCarloBarostat.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGBSAOBCForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeMonteCarloFlexibleBarostat.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceCustomNonbondedForce.dir/link.d CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -o ../../../TestReferenceCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target TestReferenceCustomNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/depend make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/DependInfo.cmake "--color=" [ 83%] Linking CXX executable ../../TestSerializeHarmonicBondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicBondForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../../TestSerializeCustomGBForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomGBForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeGBSAOBCForce.dir/link.d CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -o ../../TestSerializeGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/depend [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeMonteCarloMembraneBarostat.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/DependInfo.cmake "--color=" [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeNonbondedForce.cpp [ 85%] Built target TestSerializeGBSAOBCForce make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeNoseHooverIntegrator.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializePeriodicTorsionForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeHarmonicBondForce.dir/link.d CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -o ../../TestSerializeHarmonicBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomGBForce.dir/link.d CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -o ../../TestSerializeCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build [ 85%] Built target TestSerializeHarmonicBondForce [ 85%] Linking CXX executable ../../TestSerializeHarmonicAngleForce make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicAngleForce.dir/link.txt --verbose=1 make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/DependInfo.cmake "--color=" [ 85%] Built target TestSerializeCustomGBForce make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/depend [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o [ 85%] Linking CXX executable ../../TestSerializeCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomManyParticleForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -MF CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeRBTorsionForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeState.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -MF CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o.d -o CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeRMSDForce.cpp [ 85%] Building CXX object serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -MF CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o.d -o CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeState.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomManyParticleForce.dir/link.d CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -o ../../TestSerializeCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeHarmonicAngleForce.dir/link.d CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -o ../../TestSerializeHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../../TestSerializeCustomHbondForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomHbondForce.dir/link.txt --verbose=1 [ 85%] Built target TestSerializeCustomManyParticleForce make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/depend [ 85%] Built target TestSerializeHarmonicAngleForce make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeSystem.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/build make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestEnforcePeriodicBox.dir/DependInfo.cmake "--color=" make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindExclusions.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -MF CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o.d -o CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeSystem.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -MF CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o.d -o CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/serialization/tests/TestSerializeTabulatedFunctions.cpp [ 87%] Building CXX object tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -MF CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o.d -o CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestEnforcePeriodicBox.cpp make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindMolecules.dir/DependInfo.cmake "--color=" [ 87%] Building CXX object tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -MF CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o.d -o CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestFindExclusions.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -MF CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o.d -o CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestFindMolecules.cpp [ 87%] Linking CXX executable ../../TestSerializeCustomTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomHbondForce.dir/link.d CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -o ../../TestSerializeCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestSerializeCustomHbondForce make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestParser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object tests/CMakeFiles/TestParser.dir/TestParser.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestParser.dir/TestParser.cpp.o -MF CMakeFiles/TestParser.dir/TestParser.cpp.o.d -o CMakeFiles/TestParser.dir/TestParser.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestParser.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomTorsionForce.dir/link.d CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -o ../../TestSerializeCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestSerializeCustomTorsionForce make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSplineFitter.dir/DependInfo.cmake "--color=" make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSystem.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o [ 87%] Building CXX object tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o -MF CMakeFiles/TestSystem.dir/TestSystem.cpp.o.d -o CMakeFiles/TestSystem.dir/TestSystem.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestSystem.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -MF CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o.d -o CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestSplineFitter.cpp [ 87%] Linking CXX executable ../../TestSerializeMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 [ 87%] Linking CXX executable ../../TestSerializeGayBerneForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/link.d CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -o ../../TestSerializeMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Linking CXX executable ../../TestSerializeCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomNonbondedForce.dir/link.txt --verbose=1 [ 87%] Built target TestSerializeMonteCarloFlexibleBarostat make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorExpression.dir/DependInfo.cmake "--color=" [ 87%] Linking CXX executable ../../TestSerializeMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloBarostat.dir/link.txt --verbose=1 [ 87%] Linking CXX executable ../../TestSerializeMonteCarloAnisotropicBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -MF CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o.d -o CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestVectorExpression.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeGayBerneForce.dir/link.d CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -o ../../TestSerializeGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestSerializeGayBerneForce make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorize.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeCustomNonbondedForce.dir/link.d CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -o ../../TestSerializeCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -MF CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o.d -o CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestVectorize.cpp [ 87%] Built target TestSerializeCustomNonbondedForce make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeMonteCarloBarostat.dir/link.d CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -o ../../TestSerializeMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/link.d CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -o ../../TestSerializeMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Built target TestSerializeMonteCarloBarostat make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx2.dir/DependInfo.cmake "--color=" [ 87%] Building CXX object tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mavx -MD -MT tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -MF CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o.d -o CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestVectorizeAvx.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestSerializeMonteCarloAnisotropicBarostat [ 87%] Building CXX object tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloArgon.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mfma -mavx2 -MD -MT tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -MF CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o.d -o CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/tests/TestVectorizeAvx2.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloSodiumChloride.dir/DependInfo.cmake "--color=" [ 87%] Building CXX object examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -MF CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o.d -o CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/examples/HelloArgon.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -MF CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o.d -o CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/examples/HelloSodiumChloride.cpp [ 87%] Linking CXX executable ../TestFindMolecules cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindMolecules.dir/link.txt --verbose=1 [ 87%] Linking CXX executable ../../TestSerializeMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/link.txt --verbose=1 make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloEthane.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -MF CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o.d -o CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/examples/HelloEthane.cpp make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloWaterBox.dir/DependInfo.cmake "--color=" [ 89%] Linking CXX executable ../TestEnforcePeriodicBox cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestEnforcePeriodicBox.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Linking CXX executable ../../TestSerializeRMSDForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRMSDForce.dir/link.txt --verbose=1 [ 89%] Building CXX object examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -MF CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o.d -o CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/examples/HelloWaterBox.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/link.d CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -o ../../TestSerializeMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target TestSerializeMonteCarloMembraneBarostat /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestFindMolecules.dir/link.d CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -o ../TestFindMolecules -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/DependInfo.cmake "--color=" [ 89%] Built target TestFindMolecules make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestEnforcePeriodicBox.dir/link.d CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -o ../TestEnforcePeriodicBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o [ 89%] Linking CXX executable ../../TestSerializePeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializePeriodicTorsionForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernelFactory.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target TestEnforcePeriodicBox [ 89%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernelFactory.cpp [ 89%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernelFactory.cpp [ 89%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernels.cpp [ 89%] Linking CXX executable ../../TestSerializeRBTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRBTorsionForce.dir/link.txt --verbose=1 [ 89%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeRMSDForce.dir/link.d CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -o ../../TestSerializeRMSDForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernels.cpp [ 89%] Linking CXX executable ../TestFindExclusions cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindExclusions.dir/link.txt --verbose=1 [ 89%] Built target TestSerializeRMSDForce [ 89%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializePeriodicTorsionForce.dir/link.d CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -o ../../TestSerializePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target TestSerializePeriodicTorsionForce [ 89%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeRBTorsionForce.dir/link.d CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -o ../../TestSerializeRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestFindExclusions.dir/link.d CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -o ../TestFindExclusions -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 89%] Built target TestSerializeRBTorsionForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target TestFindExclusions [ 89%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernels.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp [ 91%] Linking CXX executable ../../TestSerializeNoseHooverIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNoseHooverIntegrator.dir/link.txt --verbose=1 [ 91%] Linking CXX executable ../TestVectorExpression cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorExpression.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeNoseHooverIntegrator.dir/link.d CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -o ../../TestSerializeNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceVdwForce.cpp [ 91%] Built target TestSerializeNoseHooverIntegrator [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestVectorExpression.dir/link.d CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -o ../TestVectorExpression -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../TestSystem cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSystem.dir/link.txt --verbose=1 [ 91%] Built target TestVectorExpression /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSystem.dir/link.d CMakeFiles/TestSystem.dir/TestSystem.cpp.o -o ../TestSystem -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target TestSystem [ 91%] Linking CXX executable ../HelloArgon cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloArgon.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/HelloArgon.dir/link.d CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -o ../HelloArgon -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target HelloArgon [ 91%] Linking CXX executable ../../TestSerializeState cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeState.dir/link.txt --verbose=1 [ 91%] Linking CXX executable ../HelloSodiumChloride cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloSodiumChloride.dir/link.txt --verbose=1 [ 91%] Linking CXX executable ../HelloEthane cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloEthane.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeState.dir/link.d CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -o ../../TestSerializeState -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target TestSerializeState /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/HelloSodiumChloride.dir/link.d CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -o ../HelloSodiumChloride -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target HelloSodiumChloride [ 91%] Linking CXX executable ../../TestSerializeSystem cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeSystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/HelloEthane.dir/link.d CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -o ../HelloEthane -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target HelloEthane [ 91%] Linking CXX executable ../../TestSerializeNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNonbondedForce.dir/link.txt --verbose=1 [ 91%] Linking CXX executable ../TestSplineFitter cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSplineFitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeSystem.dir/link.d CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -o ../../TestSerializeSystem -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable ../../../TestReferenceEwald cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceEwald.dir/link.txt --verbose=1 [ 93%] Built target TestSerializeSystem /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeNonbondedForce.dir/link.d CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -o ../../TestSerializeNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSplineFitter.dir/link.d CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -o ../TestSplineFitter -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable ../HelloWaterBox cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloWaterBox.dir/link.txt --verbose=1 [ 93%] Built target TestSplineFitter [ 93%] Built target TestSerializeNonbondedForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceEwald.dir/link.d CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -o ../../../TestReferenceEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceEwald /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/HelloWaterBox.dir/link.d CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -o ../HelloWaterBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target HelloWaterBox [ 93%] Linking CXX executable ../../TestSerializeIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeIntegrator.dir/link.d CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -o ../../TestSerializeIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestSerializeIntegrator [ 93%] Linking CXX executable ../../TestSerializeTabulatedFunctions cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeTabulatedFunctions.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestSerializeTabulatedFunctions.dir/link.d CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -o ../../TestSerializeTabulatedFunctions -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestSerializeTabulatedFunctions [ 93%] Linking CXX executable ../TestVectorizeAvx2 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx2.dir/link.txt --verbose=1 [ 93%] Linking CXX shared library ../../../../libOpenMMDrudeReference.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeReference.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestVectorizeAvx2.dir/link.d CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -o ../TestVectorizeAvx2 -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable ../TestVectorizeAvx [ 93%] Built target TestVectorizeAvx2 cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMDrudeReference.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeReference.so -o ../../../../libOpenMMDrudeReference.so CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMDrude.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMDrudeReference make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/depend make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/depend make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/depend make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -MF CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o.d -o CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeNoseHoover.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -MF CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o.d -o CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeSCFIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeLangevinIntegrator.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestVectorizeAvx.dir/link.d CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -o ../TestVectorizeAvx -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestVectorizeAvx [ 93%] Linking CXX executable ../TestVectorize cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestVectorize.dir/link.d CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -o ../TestVectorize -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestVectorize [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeSCFIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/link.d CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -o ../../../../../TestReferenceDrudeSCFIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeSCFIntegrator [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceDrudeForce.dir/link.d CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -o ../../../../../TestReferenceDrudeForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeNoseHoover cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeNoseHoover.dir/link.txt --verbose=1 [ 93%] Built target TestReferenceDrudeForce [ 93%] Linking CXX executable ../TestParser cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestParser.dir/link.txt --verbose=1 [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeLangevinIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceDrudeNoseHoover.dir/link.d CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -o ../../../../../TestReferenceDrudeNoseHoover -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeNoseHoover /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestParser.dir/link.d CMakeFiles/TestParser.dir/TestParser.cpp.o -o ../TestParser -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestParser /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/link.d CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -o ../../../../../TestReferenceDrudeLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeLangevinIntegrator [ 93%] Linking CXX shared library ../../libOpenMMPME.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMPME.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMPME.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMPME.so -o ../../libOpenMMPME.so CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMPME make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -MF CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o.d -o CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/cpupme/tests/TestCpuPme.cpp [ 93%] Linking CXX shared library ../../../libOpenMMCPU.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMCPU.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMCPU.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMCPU.so -o ../../../libOpenMMCPU.so CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMCPU make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -MF CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o.d -o CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCheckpoints.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -MF CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o.d -o CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCustomGBForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -MF CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o.d -o CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuGBSAOBCForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -MF CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o.d -o CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuNeighborList.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -MF CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o.d -o CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCompoundIntegrator.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -MF CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o.d -o CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCustomCPPForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -MF CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCustomManyParticleForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -MF CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o.d -o CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuDispersionPME.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -MF CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuHarmonicAngleForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -MF CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o.d -o CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuGayBerneForce.cpp [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -MF CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuNonbondedForce.cpp [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -MF CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o.d -o CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuEwald.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -MF CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o.d -o CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuSettle.cpp [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -MF CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuCustomNonbondedForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuLangevinMiddleIntegrator.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuLangevinIntegrator.cpp [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -MF CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuPeriodicTorsionForce.cpp [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -MF CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o.d -o CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/platforms/cpu/tests/TestCpuRBTorsionForce.cpp [ 95%] Linking CXX shared library ../../../../libOpenMMRPMDReference.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMRPMDReference.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDReference.so -o ../../../../libOpenMMRPMDReference.so CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMRPMD.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target OpenMMRPMDReference make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -MF CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o.d -o CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/reference/tests/TestReferenceRpmd.cpp [ 95%] Linking CXX executable ../../../TestCpuCustomCPPForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomCPPForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCustomCPPForce.dir/link.d CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -o ../../../TestCpuCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCustomCPPForce [ 95%] Linking CXX executable ../../../TestCpuPme cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPme.dir/link.txt --verbose=1 [ 95%] Linking CXX executable ../../../TestCpuCheckpoints cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCheckpoints.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuPme.dir/link.d CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -o ../../../TestCpuPme -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMPME.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuPme /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCheckpoints.dir/link.d CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -o ../../../TestCpuCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Linking CXX executable ../../../TestCpuSettle cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuSettle.dir/link.txt --verbose=1 [ 95%] Built target TestCpuCheckpoints [ 95%] Linking CXX executable ../../../TestCpuNeighborList cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNeighborList.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuSettle.dir/link.d CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -o ../../../TestCpuSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Linking CXX executable ../../../TestCpuPeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPeriodicTorsionForce.dir/link.txt --verbose=1 [ 95%] Built target TestCpuSettle /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuNeighborList.dir/link.d CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -o ../../../TestCpuNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuNeighborList /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuPeriodicTorsionForce.dir/link.d CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -o ../../../TestCpuPeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuPeriodicTorsionForce [ 95%] Linking CXX executable ../../../TestCpuGayBerneForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGayBerneForce.dir/link.txt --verbose=1 [ 95%] Linking CXX executable ../../../TestCpuRBTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuRBTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuGayBerneForce.dir/link.d CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -o ../../../TestCpuGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Linking CXX executable ../../../TestCpuHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuHarmonicAngleForce.dir/link.txt --verbose=1 [ 95%] Built target TestCpuGayBerneForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuRBTorsionForce.dir/link.d CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -o ../../../TestCpuRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuRBTorsionForce [ 95%] Linking CXX executable ../../../TestCpuLangevinIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuHarmonicAngleForce.dir/link.d CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -o ../../../TestCpuHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuHarmonicAngleForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuLangevinIntegrator.dir/link.d CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -o ../../../TestCpuLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinIntegrator [ 95%] Linking CXX executable ../../../TestCpuLangevinMiddleIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/link.txt --verbose=1 [ 95%] Linking CXX executable ../../../TestCpuGBSAOBCForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGBSAOBCForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/link.d CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -o ../../../TestCpuLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinMiddleIntegrator /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuGBSAOBCForce.dir/link.d CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -o ../../../TestCpuGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuGBSAOBCForce [ 95%] Linking CXX executable ../../../TestCpuCompoundIntegrator cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCompoundIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCompoundIntegrator.dir/link.d CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -o ../../../TestCpuCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCompoundIntegrator [ 95%] Linking CXX executable ../../../TestCpuCustomGBForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomGBForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCustomGBForce.dir/link.d CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -o ../../../TestCpuCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCustomGBForce [ 95%] Linking CXX executable ../../../../../TestReferenceRpmd cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRpmd.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceRpmd.dir/link.d CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -o ../../../../../TestReferenceRpmd -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMRPMDReference.so ../../../../../libOpenMMRPMD.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestReferenceRpmd [ 97%] Linking CXX executable ../../../TestCpuCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomManyParticleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCustomManyParticleForce.dir/link.d CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -o ../../../TestCpuCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomManyParticleForce [ 97%] Linking CXX executable ../../../TestCpuNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuNonbondedForce.dir/link.d CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -o ../../../TestCpuNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuNonbondedForce [ 97%] Linking CXX executable ../../../TestCpuDispersionPME cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuDispersionPME.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuDispersionPME.dir/link.d CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -o ../../../TestCpuDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuDispersionPME [ 97%] Linking CXX executable ../../../TestCpuCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuCustomNonbondedForce.dir/link.d CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -o ../../../TestCpuCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomNonbondedForce [ 97%] Linking CXX shared library ../../../../libOpenMMAmoebaReference.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMAmoebaReference.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaReference.so -o ../../../../libOpenMMAmoebaReference.so CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMAmoeba.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target OpenMMAmoebaReference make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o [ 97%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o [ 97%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o [ 97%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaTorsionTorsionForce.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference 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-I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -MF CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o.d -o CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaExtrapolatedPolarization.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceWcaDispersionForce.cpp [100%] Linking CXX executable ../../../TestCpuEwald cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuEwald.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestCpuEwald.dir/link.d CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -o ../../../TestCpuEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestCpuEwald [100%] Linking CXX executable ../../../../../TestReferenceWcaDispersionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceWcaDispersionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceWcaDispersionForce.dir/link.d CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -o ../../../../../TestReferenceWcaDispersionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceWcaDispersionForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaTorsionTorsionForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/link.d CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -o ../../../../../TestReferenceAmoebaTorsionTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Linking CXX executable ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/link.txt --verbose=1 [100%] Built target TestReferenceAmoebaTorsionTorsionForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/link.d CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -o ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaGeneralizedKirkwoodForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaExtrapolatedPolarization cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/link.d CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -o ../../../../../TestReferenceAmoebaExtrapolatedPolarization -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaExtrapolatedPolarization [100%] Linking CXX executable ../../../../../TestReferenceHippoNonbondedForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHippoNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceHippoNonbondedForce.dir/link.d CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -o ../../../../../TestReferenceHippoNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceHippoNonbondedForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaMultipoleForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/link.d CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -o ../../../../../TestReferenceAmoebaMultipoleForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaMultipoleForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaVdwForce cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaVdwForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/TestReferenceAmoebaVdwForce.dir/link.d CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -o ../../../../../TestReferenceAmoebaVdwForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaVdwForce [100%] Linking CXX shared library ../../../libOpenMMOpenCL.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMOpenCL.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMOpenCL.so -o ../../../libOpenMMOpenCL.so CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMOpenCL make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/depend make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/depend make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.2+dfsg /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernelFactory.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/src/OpenCLDrudeKernelFactory.cpp [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.cpp [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/src/OpenCLRpmdKernelFactory.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/platforms/common/src/CommonDrudeKernels.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.cpp [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=2 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/src -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.2+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/./include -I/build/reproducible-path/openmm-8.1.2+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/platforms/common/src/CommonRpmdKernels.cpp [100%] Linking CXX shared library ../../../../libOpenMMDrudeOpenCL.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMDrudeOpenCL.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeOpenCL.so -o ../../../../libOpenMMDrudeOpenCL.so CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMDrude.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMDrudeOpenCL [100%] Linking CXX shared library ../../../../libOpenMMRPMDOpenCL.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,--dependency-file=CMakeFiles/OpenMMRPMDOpenCL.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDOpenCL.so -o ../../../../libOpenMMRPMDOpenCL.so CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMRPMD.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMRPMDOpenCL [100%] Linking CXX shared library ../../../../libOpenMMAmoebaOpenCL.so cd /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,--dependency-file=CMakeFiles/OpenMMAmoebaOpenCL.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaOpenCL.so -o ../../../../libOpenMMAmoebaOpenCL.so CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMAmoeba.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMAmoebaOpenCL make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' pybuild --dir obj-x86_64-linux-gnu/python --build I: pybuild base:311: /usr/bin/python3.13 setup.py build Compiling openmm/app/internal/compiled.pyx because it changed. [1/1] Cythonizing openmm/app/internal/compiled.pyx /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling openmm/app/internal/xtc_utils/xtc.pyx because it changed. [1/1] Cythonizing openmm/app/internal/xtc_utils/xtc.pyx author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.2 running build running build_py creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/unit creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build/temp.linux-x86_64-cpython-313/src/swig_doxygen x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-313/src/swig_doxygen/OpenMMSwig.o -std=c++11 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:105178:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 105178 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:105049:25: note: declared here 105049 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:105181:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 105181 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:105049:25: note: declared here 105049 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100339:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 100339 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100130:25: note: declared here 100130 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100343:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 100343 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100130:25: note: declared here 100130 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99892:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99892 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99893:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 99893 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99688:25: note: declared here 99688 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99897:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 99897 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99688:25: note: declared here 99688 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99206:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 99206 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99176:25: note: declared here 99176 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94711:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94711 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94615:25: note: declared here 94615 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:94714:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94714 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94615:25: note: declared here 94615 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94102:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94102 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94027:25: note: declared here 94027 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:93926:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 93926 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:93855:25: note: declared here 93855 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90348:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 90348 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:90306:25: note: declared here 90306 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:90351:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 90351 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:90306:25: note: declared here 90306 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84520:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 84520 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84490:25: note: declared here 84490 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79971:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 79971 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79931:25: note: declared here 79931 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79852:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 79852 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79816:25: note: declared here 79816 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79496:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 79496 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79451:25: note: declared here 79451 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:66338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 66338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:66263:25: note: declared here 66263 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:66162:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 66162 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:66091:25: note: declared here 66091 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:65154:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 65154 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:65119:25: note: declared here 65119 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:62385:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 62385 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:62345:25: note: declared here 62345 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61960:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 61960 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:61902:25: note: declared here 61902 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:61963:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 61963 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:61902:25: note: declared here 61902 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51445:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51445 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51415:25: note: declared here 51415 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51080:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51080 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51081:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 51081 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50956:25: note: declared here 50956 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51085:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 51085 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50956:25: note: declared here 50956 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50784:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50784 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50785:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 50785 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50664:25: note: declared here 50664 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50789:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 50789 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50664:25: note: declared here 50664 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:47243:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 47243 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:47168:25: note: declared here 47168 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:47067:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 47067 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:46996:25: note: declared here 46996 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:46397:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 46397 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:46362:25: note: declared here 46362 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38981:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38981 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38906:25: note: declared here 38906 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38805:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38805 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38734:25: note: declared here 38734 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105389:70: src/swig_doxygen/OpenMMSwig.cxx:104888:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104888 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104764:25: note: declared here 104764 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105389:70: src/swig_doxygen/OpenMMSwig.cxx:104891:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104891 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104764:25: note: declared here 104764 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105478:72: src/swig_doxygen/OpenMMSwig.cxx:104738:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104738 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104607:25: note: declared here 104607 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105478:72: src/swig_doxygen/OpenMMSwig.cxx:104741:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104741 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104607:25: note: declared here 104607 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94901:64: src/swig_doxygen/OpenMMSwig.cxx:94489:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94489 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94398:25: note: declared here 94398 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94901:64: src/swig_doxygen/OpenMMSwig.cxx:94492:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94492 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94398:25: note: declared here 94398 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94966:66: src/swig_doxygen/OpenMMSwig.cxx:94377:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94377 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94279:25: note: declared here 94279 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94966:66: src/swig_doxygen/OpenMMSwig.cxx:94380:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94380 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94279:25: note: declared here 94279 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:93300:76: src/swig_doxygen/OpenMMSwig.cxx:93156:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 93156 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:93107:25: note: declared here 93107 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92993:64: src/swig_doxygen/OpenMMSwig.cxx:92867:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 92867 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92822:25: note: declared here 92822 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92789:73: src/swig_doxygen/OpenMMSwig.cxx:92645:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 92645 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92596:25: note: declared here 92596 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92482:61: src/swig_doxygen/OpenMMSwig.cxx:92356:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 92356 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92311:25: note: declared here 92311 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90199:65: src/swig_doxygen/OpenMMSwig.cxx:90130:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90130 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90100:25: note: declared here 90100 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90221:67: src/swig_doxygen/OpenMMSwig.cxx:90086:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90086 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90049:25: note: declared here 90049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90221:67: src/swig_doxygen/OpenMMSwig.cxx:90089:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90089 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90049:25: note: declared here 90049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:79659:56: src/swig_doxygen/OpenMMSwig.cxx:79356:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 79356 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79316:25: note: declared here 79316 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72695:73: src/swig_doxygen/OpenMMSwig.cxx:72551:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 72551 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72502:25: note: declared here 72502 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72388:61: src/swig_doxygen/OpenMMSwig.cxx:72262:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 72262 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72217:25: note: declared here 72217 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:65047:55: src/swig_doxygen/OpenMMSwig.cxx:64978:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 64978 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:64948:25: note: declared here 64948 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62543:54: src/swig_doxygen/OpenMMSwig.cxx:62263:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 62263 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:62228:25: note: declared here 62228 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62124:56: src/swig_doxygen/OpenMMSwig.cxx:61824:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61824 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61771:25: note: declared here 61771 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62124:56: src/swig_doxygen/OpenMMSwig.cxx:61827:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61827 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61771:25: note: declared here 61771 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62159:58: src/swig_doxygen/OpenMMSwig.cxx:61758:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61758 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61698:25: note: declared here 61698 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62159:58: src/swig_doxygen/OpenMMSwig.cxx:61761:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61761 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61698:25: note: declared here 61698 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:60224:75: src/swig_doxygen/OpenMMSwig.cxx:60118:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60118 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:60079:25: note: declared here 60079 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:59993:63: src/swig_doxygen/OpenMMSwig.cxx:59905:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59905 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59870:25: note: declared here 59870 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:49002:79: src/swig_doxygen/OpenMMSwig.cxx:48839:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 48839 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48785:25: note: declared here 48785 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48657:67: src/swig_doxygen/OpenMMSwig.cxx:48512:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 48512 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48462:25: note: declared here 48462 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:46290:62: src/swig_doxygen/OpenMMSwig.cxx:46221:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 46221 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:46191:25: note: declared here 46191 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:44578:69: src/swig_doxygen/OpenMMSwig.cxx:44453:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 44453 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:44409:25: note: declared here 44409 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:44309:57: src/swig_doxygen/OpenMMSwig.cxx:44202:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 44202 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:44162:25: note: declared here 44162 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84668:50: src/swig_doxygen/OpenMMSwig.cxx:84434:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 84434 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84409:25: note: declared here 84409 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:60567:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60567 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60568:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60568 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60502:25: note: declared here 60502 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60572:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60572 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60502:25: note: declared here 60502 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68493:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 68493 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68425:25: note: declared here 68425 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68494:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68494 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68427:25: note: declared here 68427 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68495:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68495 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68429:25: note: declared here 68429 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68499:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 68499 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68425:25: note: declared here 68425 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38343:75: src/swig_doxygen/OpenMMSwig.cxx:38233:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38233 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38187:25: note: declared here 38187 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38102:63: src/swig_doxygen/OpenMMSwig.cxx:38010:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38010 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34664:75: src/swig_doxygen/OpenMMSwig.cxx:34554:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 34554 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34508:25: note: declared here 34508 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34423:63: src/swig_doxygen/OpenMMSwig.cxx:34331:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 34331 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34289:25: note: declared here 34289 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34265:76: src/swig_doxygen/OpenMMSwig.cxx:34155:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 34155 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34109:25: note: declared here 34109 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34024:64: src/swig_doxygen/OpenMMSwig.cxx:33932:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 33932 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33890:25: note: declared here 33890 | std::vector< double > v3 ; | ^~ x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-313/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-rpath,/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/_openmm.cpython-313-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-313/openmm/app/internal x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.13 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-313/openmm/app/internal/compiled.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-313/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/compiled.cpython-313-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.13 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xdrfile.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.13 -c openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xdrfile_xtc.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.13 -c openmm/app/internal/xtc_utils/src/xtc.cpp -o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xtc.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.13 -c openmm/app/internal/xtc_utils/xtc.cpp -o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/xtc.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from openmm/app/internal/xtc_utils/xtc.cpp:1275: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xdrfile.o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xdrfile_xtc.o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/src/xtc.o build/temp.linux-x86_64-cpython-313/openmm/app/internal/xtc_utils/xtc.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/xtc_utils.cpython-313-x86_64-linux-gnu.so I: pybuild base:311: /usr/bin/python3 setup.py build author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.2 running build running build_py creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/unit creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build/temp.linux-x86_64-cpython-312/src/swig_doxygen x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -std=c++11 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:105178:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 105178 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:105049:25: note: declared here 105049 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:105181:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 105181 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:105049:25: note: declared here 105049 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100339:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 100339 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100130:25: note: declared here 100130 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100342:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100342 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100128:25: note: declared here 100128 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:100343:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 100343 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:100130:25: note: declared here 100130 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99892:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99892 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99893:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 99893 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99688:25: note: declared here 99688 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99896:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99896 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99686:25: note: declared here 99686 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:99897:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 99897 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99688:25: note: declared here 99688 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99206:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 99206 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99176:25: note: declared here 99176 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94711:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94711 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94615:25: note: declared here 94615 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:94714:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94714 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94615:25: note: declared here 94615 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94102:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 94102 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:94027:25: note: declared here 94027 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:93926:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 93926 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:93855:25: note: declared here 93855 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90348:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 90348 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:90306:25: note: declared here 90306 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:90351:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 90351 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:90306:25: note: declared here 90306 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84520:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 84520 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84490:25: note: declared here 84490 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79971:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 79971 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79931:25: note: declared here 79931 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79852:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 79852 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79816:25: note: declared here 79816 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79496:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 79496 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:79451:25: note: declared here 79451 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:66338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 66338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:66263:25: note: declared here 66263 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:66162:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 66162 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:66091:25: note: declared here 66091 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:65154:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 65154 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:65119:25: note: declared here 65119 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:62385:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 62385 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:62345:25: note: declared here 62345 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61960:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 61960 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:61902:25: note: declared here 61902 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:61963:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 61963 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:61902:25: note: declared here 61902 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51445:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51445 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51415:25: note: declared here 51415 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51080:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51080 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51081:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 51081 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50956:25: note: declared here 50956 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51085:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 51085 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50956:25: note: declared here 50956 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:51084:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 51084 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50954:25: note: declared here 50954 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50784:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50784 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50785:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 50785 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50664:25: note: declared here 50664 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50789:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 50789 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50664:25: note: declared here 50664 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50788:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 50788 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50662:25: note: declared here 50662 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:47243:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 47243 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:47168:25: note: declared here 47168 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:47067:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 47067 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:46996:25: note: declared here 46996 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:46397:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 46397 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:46362:25: note: declared here 46362 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38981:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38981 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38906:25: note: declared here 38906 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38805:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38805 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38734:25: note: declared here 38734 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105389:70: src/swig_doxygen/OpenMMSwig.cxx:104888:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104888 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104764:25: note: declared here 104764 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105389:70: src/swig_doxygen/OpenMMSwig.cxx:104891:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104891 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104764:25: note: declared here 104764 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105478:72: src/swig_doxygen/OpenMMSwig.cxx:104738:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104738 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104607:25: note: declared here 104607 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:105478:72: src/swig_doxygen/OpenMMSwig.cxx:104741:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 104741 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:104607:25: note: declared here 104607 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94901:64: src/swig_doxygen/OpenMMSwig.cxx:94489:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94489 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94398:25: note: declared here 94398 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94901:64: src/swig_doxygen/OpenMMSwig.cxx:94492:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94492 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94398:25: note: declared here 94398 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94966:66: src/swig_doxygen/OpenMMSwig.cxx:94377:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94377 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94279:25: note: declared here 94279 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:94966:66: src/swig_doxygen/OpenMMSwig.cxx:94380:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 94380 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:94279:25: note: declared here 94279 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:93300:76: src/swig_doxygen/OpenMMSwig.cxx:93156:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 93156 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:93107:25: note: declared here 93107 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92993:64: src/swig_doxygen/OpenMMSwig.cxx:92867:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 92867 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92822:25: note: declared here 92822 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92789:73: src/swig_doxygen/OpenMMSwig.cxx:92645:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 92645 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92596:25: note: declared here 92596 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:92482:61: src/swig_doxygen/OpenMMSwig.cxx:92356:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 92356 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:92311:25: note: declared here 92311 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90199:65: src/swig_doxygen/OpenMMSwig.cxx:90130:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90130 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90100:25: note: declared here 90100 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90221:67: src/swig_doxygen/OpenMMSwig.cxx:90086:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90086 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90049:25: note: declared here 90049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:90221:67: src/swig_doxygen/OpenMMSwig.cxx:90089:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 90089 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:90049:25: note: declared here 90049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:79659:56: src/swig_doxygen/OpenMMSwig.cxx:79356:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 79356 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:79316:25: note: declared here 79316 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72695:73: src/swig_doxygen/OpenMMSwig.cxx:72551:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 72551 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72502:25: note: declared here 72502 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72388:61: src/swig_doxygen/OpenMMSwig.cxx:72262:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 72262 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72217:25: note: declared here 72217 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:65047:55: src/swig_doxygen/OpenMMSwig.cxx:64978:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 64978 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:64948:25: note: declared here 64948 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62543:54: src/swig_doxygen/OpenMMSwig.cxx:62263:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 62263 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:62228:25: note: declared here 62228 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62124:56: src/swig_doxygen/OpenMMSwig.cxx:61824:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61824 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61771:25: note: declared here 61771 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62124:56: src/swig_doxygen/OpenMMSwig.cxx:61827:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61827 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61771:25: note: declared here 61771 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62159:58: src/swig_doxygen/OpenMMSwig.cxx:61758:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61758 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61698:25: note: declared here 61698 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:62159:58: src/swig_doxygen/OpenMMSwig.cxx:61761:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 61761 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:61698:25: note: declared here 61698 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:60224:75: src/swig_doxygen/OpenMMSwig.cxx:60118:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60118 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:60079:25: note: declared here 60079 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:59993:63: src/swig_doxygen/OpenMMSwig.cxx:59905:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59905 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59870:25: note: declared here 59870 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:49002:79: src/swig_doxygen/OpenMMSwig.cxx:48839:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 48839 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48785:25: note: declared here 48785 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48657:67: src/swig_doxygen/OpenMMSwig.cxx:48512:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 48512 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48462:25: note: declared here 48462 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:46290:62: src/swig_doxygen/OpenMMSwig.cxx:46221:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 46221 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:46191:25: note: declared here 46191 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:44578:69: src/swig_doxygen/OpenMMSwig.cxx:44453:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 44453 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:44409:25: note: declared here 44409 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:44309:57: src/swig_doxygen/OpenMMSwig.cxx:44202:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 44202 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:44162:25: note: declared here 44162 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84668:50: src/swig_doxygen/OpenMMSwig.cxx:84434:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 84434 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84409:25: note: declared here 84409 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:60567:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60567 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60568:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60568 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60502:25: note: declared here 60502 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60572:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 60572 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60502:25: note: declared here 60502 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:60571:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 60571 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:60500:25: note: declared here 60500 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68493:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 68493 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68425:25: note: declared here 68425 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68494:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68494 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68427:25: note: declared here 68427 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68495:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68495 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68429:25: note: declared here 68429 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:68844:60: src/swig_doxygen/OpenMMSwig.cxx:68499:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 68499 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68425:25: note: declared here 68425 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38343:75: src/swig_doxygen/OpenMMSwig.cxx:38233:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38233 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38187:25: note: declared here 38187 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38102:63: src/swig_doxygen/OpenMMSwig.cxx:38010:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38010 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34664:75: src/swig_doxygen/OpenMMSwig.cxx:34554:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 34554 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34508:25: note: declared here 34508 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34423:63: src/swig_doxygen/OpenMMSwig.cxx:34331:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 34331 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34289:25: note: declared here 34289 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34265:76: src/swig_doxygen/OpenMMSwig.cxx:34155:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 34155 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:34109:25: note: declared here 34109 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34024:64: src/swig_doxygen/OpenMMSwig.cxx:33932:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 33932 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33890:25: note: declared here 33890 | std::vector< double > v3 ; | ^~ x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-rpath,/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-312/openmm/app/internal x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.12 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile_xtc.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/src/xtc.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xtc.o x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.2+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.2+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.2+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/xtc.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/xtc.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from openmm/app/internal/xtc_utils/xtc.cpp:1275: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile.o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile_xtc.o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xtc.o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/xtc.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/xtc_utils.cpython-312-x86_64-linux-gnu.so make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_auto_test -- 'ARGS+=--timeout 3600' cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 "ARGS+=--timeout 3600" make[2]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j42 --timeout 3600 UpdateCTestConfiguration from :/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: TestReferenceATMForce 1: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceATMForce 1: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 1: Test timeout computed to be: 3600 test 2 Start 2: TestReferenceAndersenThermostat 2: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAndersenThermostat 2: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 2: Test timeout computed to be: 3600 test 3 Start 3: TestReferenceBrownianIntegrator 3: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceBrownianIntegrator 3: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 3: Test timeout computed to be: 3600 test 4 Start 4: TestReferenceCMAPTorsionForce 4: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCMAPTorsionForce 4: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 4: Test timeout computed to be: 3600 test 5 Start 5: TestReferenceCMMotionRemover 5: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCMMotionRemover 5: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 5: Test timeout computed to be: 3600 test 6 Start 6: TestReferenceCheckpoints 6: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCheckpoints 6: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 6: Test timeout computed to be: 3600 test 7 Start 7: TestReferenceCompoundIntegrator 7: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCompoundIntegrator 7: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 7: Test timeout computed to be: 3600 test 8 Start 8: TestReferenceCustomAngleForce 8: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomAngleForce 8: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 8: Test timeout computed to be: 3600 test 9 Start 9: TestReferenceCustomBondForce 9: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomBondForce 9: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 9: Test timeout computed to be: 3600 test 10 Start 10: TestReferenceCustomCPPForce 10: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomCPPForce 10: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 10: Test timeout computed to be: 3600 test 11 Start 11: TestReferenceCustomCVForce 11: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomCVForce 11: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 11: Test timeout computed to be: 3600 test 12 Start 12: TestReferenceCustomCentroidBondForce 12: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomCentroidBondForce 12: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 12: Test timeout computed to be: 3600 test 13 Start 13: TestReferenceCustomCompoundBondForce 13: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomCompoundBondForce 13: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 13: Test timeout computed to be: 3600 test 14 Start 14: TestReferenceCustomExternalForce 14: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomExternalForce 14: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 14: Test timeout computed to be: 3600 test 15 Start 15: TestReferenceCustomGBForce 15: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomGBForce 15: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 15: Test timeout computed to be: 3600 test 16 Start 16: TestReferenceCustomHbondForce 16: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomHbondForce 16: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 16: Test timeout computed to be: 3600 test 17 Start 17: TestReferenceCustomIntegrator 17: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomIntegrator 17: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 17: Test timeout computed to be: 3600 test 18 Start 18: TestReferenceCustomManyParticleForce 18: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomManyParticleForce 18: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 18: Test timeout computed to be: 3600 test 19 Start 19: TestReferenceCustomNonbondedForce 19: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomNonbondedForce 19: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 19: Test timeout computed to be: 3600 test 20 Start 20: TestReferenceCustomTorsionForce 20: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceCustomTorsionForce 20: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 20: Test timeout computed to be: 3600 test 21 Start 21: TestReferenceDispersionPME 21: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceDispersionPME 21: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 21: Test timeout computed to be: 3600 test 22 Start 22: TestReferenceEwald 22: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceEwald 22: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 22: Test timeout computed to be: 3600 test 23 Start 23: TestReferenceGBSAOBCForce 23: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceGBSAOBCForce 23: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 23: Test timeout computed to be: 3600 test 24 Start 24: TestReferenceGayBerneForce 24: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceGayBerneForce 24: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 24: Test timeout computed to be: 3600 test 25 Start 25: TestReferenceHarmonicAngleForce 25: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceHarmonicAngleForce 25: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 25: Test timeout computed to be: 3600 test 26 Start 26: TestReferenceHarmonicBondForce 26: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceHarmonicBondForce 26: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 26: Test timeout computed to be: 3600 test 27 Start 27: TestReferenceKineticEnergy 27: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceKineticEnergy 27: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 27: Test timeout computed to be: 3600 test 28 Start 28: TestReferenceLangevinIntegrator 28: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceLangevinIntegrator 28: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 28: Test timeout computed to be: 3600 test 29 Start 29: TestReferenceLangevinMiddleIntegrator 29: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceLangevinMiddleIntegrator 29: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 29: Test timeout computed to be: 3600 test 30 Start 30: TestReferenceLocalEnergyMinimizer 30: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceLocalEnergyMinimizer 30: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 30: Test timeout computed to be: 3600 test 31 Start 31: TestReferenceMonteCarloAnisotropicBarostat 31: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceMonteCarloAnisotropicBarostat 31: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 31: Test timeout computed to be: 3600 test 32 Start 32: TestReferenceMonteCarloBarostat 32: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceMonteCarloBarostat 32: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 32: Test timeout computed to be: 3600 test 33 Start 33: TestReferenceMonteCarloFlexibleBarostat 33: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceMonteCarloFlexibleBarostat 33: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 33: Test timeout computed to be: 3600 test 34 Start 34: TestReferenceMonteCarloMembraneBarostat 34: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceMonteCarloMembraneBarostat 34: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 34: Test timeout computed to be: 3600 test 35 Start 35: TestReferenceNeighborList 35: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceNeighborList 35: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 35: Test timeout computed to be: 3600 test 36 Start 36: TestReferenceNonbondedForce 36: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceNonbondedForce 36: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 36: Test timeout computed to be: 3600 test 37 Start 37: TestReferenceNoseHooverIntegrator 37: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceNoseHooverIntegrator 37: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 37: Test timeout computed to be: 3600 test 38 Start 38: TestReferencePeriodicTorsionForce 38: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferencePeriodicTorsionForce 38: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 38: Test timeout computed to be: 3600 test 39 Start 39: TestReferenceRBTorsionForce 39: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceRBTorsionForce 39: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 39: Test timeout computed to be: 3600 test 40 Start 40: TestReferenceRMSDForce 40: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceRMSDForce 40: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 40: Test timeout computed to be: 3600 test 41 Start 41: TestReferenceRandom 41: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceRandom 41: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 41: Test timeout computed to be: 3600 test 42 Start 42: TestReferenceSettle 42: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceSettle 42: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 42: Test timeout computed to be: 3600 4: Done 5: Done 7: Done 8: Done 9: Done 10: Done 11: Done 14: Done 20: Done 25: Done 26: Done 27: Done 1/120 Test #4: TestReferenceCMAPTorsionForce ................. Passed 0.08 sec 2/120 Test #5: TestReferenceCMMotionRemover .................. Passed 0.08 sec 3/120 Test #7: TestReferenceCompoundIntegrator ............... Passed 0.07 sec 4/120 Test #8: TestReferenceCustomAngleForce ................. Passed 0.07 sec 5/120 Test #9: TestReferenceCustomBondForce .................. Passed 0.07 sec 6/120 Test #10: TestReferenceCustomCPPForce ................... Passed 0.07 sec 7/120 Test #11: TestReferenceCustomCVForce .................... Passed 0.07 sec 8/120 Test #14: TestReferenceCustomExternalForce .............. Passed 0.06 sec 9/120 Test #20: TestReferenceCustomTorsionForce ............... Passed 0.06 sec 10/120 Test #25: TestReferenceHarmonicAngleForce ............... Passed 0.05 sec 11/120 Test #26: TestReferenceHarmonicBondForce ................ Passed 0.04 sec 12/120 Test #27: TestReferenceKineticEnergy .................... Passed 0.04 sec test 43 Start 43: TestReferenceVariableLangevinIntegrator 43: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceVariableLangevinIntegrator 43: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 43: Test timeout computed to be: 3600 test 44 Start 44: TestReferenceVariableVerletIntegrator 44: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceVariableVerletIntegrator 44: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 44: Test timeout computed to be: 3600 test 45 Start 45: TestReferenceVerletIntegrator 45: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceVerletIntegrator 45: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 45: Test timeout computed to be: 3600 test 46 Start 46: TestReferenceVirtualSites 46: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceVirtualSites 46: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests 46: Test timeout computed to be: 3600 test 47 Start 47: TestCpuCheckpoints 47: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCheckpoints "single" 47: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 47: Test timeout computed to be: 3600 test 48 Start 48: TestCpuCompoundIntegrator 48: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCompoundIntegrator "single" 48: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 48: Test timeout computed to be: 3600 test 49 Start 49: TestCpuCustomCPPForce 49: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCustomCPPForce "single" 49: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 49: Test timeout computed to be: 3600 test 50 Start 50: TestCpuCustomGBForce 50: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCustomGBForce "single" 50: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 50: Test timeout computed to be: 3600 test 51 Start 51: TestCpuCustomManyParticleForce 51: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCustomManyParticleForce "single" 51: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 51: Test timeout computed to be: 3600 test 52 Start 52: TestCpuCustomNonbondedForce 52: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuCustomNonbondedForce "single" 52: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 52: Test timeout computed to be: 3600 test 53 Start 53: TestCpuDispersionPME 53: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuDispersionPME "single" 53: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 53: Test timeout computed to be: 3600 test 54 Start 54: TestCpuEwald 54: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuEwald "single" 54: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 54: Test timeout computed to be: 3600 24: Done 13/120 Test #24: TestReferenceGayBerneForce .................... Passed 0.10 sec 38: Done 14/120 Test #38: TestReferencePeriodicTorsionForce ............. Passed 0.07 sec 39: Done 15/120 Test #39: TestReferenceRBTorsionForce ................... Passed 0.07 sec 40: Done 16/120 Test #40: TestReferenceRMSDForce ........................ Passed 0.06 sec test 55 Start 55: TestCpuGBSAOBCForce 55: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuGBSAOBCForce "single" 55: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 55: Test timeout computed to be: 3600 test 56 Start 56: TestCpuGayBerneForce 56: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuGayBerneForce "single" 56: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 56: Test timeout computed to be: 3600 test 57 Start 57: TestCpuHarmonicAngleForce 57: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuHarmonicAngleForce "single" 57: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 57: Test timeout computed to be: 3600 test 58 Start 58: TestCpuLangevinIntegrator 58: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuLangevinIntegrator "single" 58: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 58: Test timeout computed to be: 3600 42: Done 49: Done 12: Done 35: Done 17/120 Test #12: TestReferenceCustomCentroidBondForce .......... Passed 0.13 sec 18/120 Test #35: TestReferenceNeighborList ..................... Passed 0.09 sec 19/120 Test #42: TestReferenceSettle ........................... Passed 0.07 sec 20/120 Test #49: TestCpuCustomCPPForce ......................... Passed 0.04 sec test 59 Start 59: TestCpuLangevinMiddleIntegrator 59: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuLangevinMiddleIntegrator "single" 59: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 59: Test timeout computed to be: 3600 test 60 Start 60: TestCpuNeighborList 60: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuNeighborList "single" 60: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 60: Test timeout computed to be: 3600 test 61 Start 61: TestCpuNonbondedForce 61: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuNonbondedForce "single" 61: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 61: Test timeout computed to be: 3600 test 62 Start 62: TestCpuPeriodicTorsionForce 62: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuPeriodicTorsionForce "single" 62: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 62: Test timeout computed to be: 3600 46: Done 13: Done 21/120 Test #46: TestReferenceVirtualSites ..................... Passed 0.08 sec 22/120 Test #13: TestReferenceCustomCompoundBondForce .......... Passed 0.16 sec test 63 Start 63: TestCpuRBTorsionForce 63: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuRBTorsionForce "single" 63: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 63: Test timeout computed to be: 3600 test 64 Start 64: TestCpuSettle 64: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuSettle "single" 64: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests 64: Test timeout computed to be: 3600 28: Done 23/120 Test #28: TestReferenceLangevinIntegrator ............... Passed 0.14 sec test 65 Start 65: TestReferenceAmoebaExtrapolatedPolarization 65: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAmoebaExtrapolatedPolarization 65: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 65: Test timeout computed to be: 3600 57: Done 24/120 Test #57: TestCpuHarmonicAngleForce ..................... Passed 0.06 sec test 66 Start 66: TestReferenceAmoebaGeneralizedKirkwoodForce 66: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAmoebaGeneralizedKirkwoodForce 66: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 66: Test timeout computed to be: 3600 3: Done 62: Done 25/120 Test #62: TestCpuPeriodicTorsionForce ................... Passed 0.04 sec test 67 Start 67: TestReferenceAmoebaMultipoleForce 67: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAmoebaMultipoleForce 67: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 67: Test timeout computed to be: 3600 26/120 Test #3: TestReferenceBrownianIntegrator ............... Passed 0.22 sec test 68 Start 68: TestReferenceAmoebaTorsionTorsionForce 68: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAmoebaTorsionTorsionForce 68: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 68: Test timeout computed to be: 3600 6: Done 27/120 Test #6: TestReferenceCheckpoints ...................... Passed 0.22 sec test 69 Start 69: TestReferenceAmoebaVdwForce 69: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceAmoebaVdwForce 69: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 69: Test timeout computed to be: 3600 63: Done 28/120 Test #63: TestCpuRBTorsionForce ......................... Passed 0.05 sec test 70 Start 70: TestReferenceHippoNonbondedForce 70: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceHippoNonbondedForce 70: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 70: Test timeout computed to be: 3600 68: Done 29/120 Test #68: TestReferenceAmoebaTorsionTorsionForce ........ Passed 0.01 sec test 71 Start 71: TestReferenceWcaDispersionForce 71: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceWcaDispersionForce 71: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests 71: Test timeout computed to be: 3600 71: Done 30/120 Test #71: TestReferenceWcaDispersionForce ............... Passed 0.01 sec test 72 Start 72: TestReferenceRpmd 72: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceRpmd 72: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests 72: Test timeout computed to be: 3600 2: Done 31/120 Test #2: TestReferenceAndersenThermostat ............... Passed 0.27 sec test 73 Start 73: TestReferenceDrudeForce 73: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceDrudeForce 73: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests 73: Test timeout computed to be: 3600 73: Done 32/120 Test #73: TestReferenceDrudeForce ....................... Passed 0.02 sec test 74 Start 74: TestReferenceDrudeLangevinIntegrator 74: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceDrudeLangevinIntegrator 74: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests 74: Test timeout computed to be: 3600 15: Done 33/120 Test #15: TestReferenceCustomGBForce .................... Passed 0.34 sec test 75 Start 75: TestReferenceDrudeNoseHoover 75: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceDrudeNoseHoover 75: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests 75: Test timeout computed to be: 3600 60: Done 34/120 Test #60: TestCpuNeighborList ........................... Passed 0.23 sec test 76 Start 76: TestReferenceDrudeSCFIntegrator 76: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestReferenceDrudeSCFIntegrator 76: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests 76: Test timeout computed to be: 3600 69: Done 35/120 Test #69: TestReferenceAmoebaVdwForce ................... Passed 0.25 sec test 77 Start 77: TestCpuPme 77: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestCpuPme 77: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests 77: Test timeout computed to be: 3600 41: Done 36/120 Test #41: TestReferenceRandom ........................... Passed 0.61 sec test 78 Start 78: TestSerializationNode 78: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializationNode 78: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 78: Test timeout computed to be: 3600 78: Done 37/120 Test #78: TestSerializationNode ......................... Passed 0.01 sec test 79 Start 79: TestSerializeATMForce 79: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeATMForce 79: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 79: Test timeout computed to be: 3600 79: Done 38/120 Test #79: TestSerializeATMForce ......................... Passed 0.01 sec test 80 Start 80: TestSerializeAndersenThermostat 80: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeAndersenThermostat 80: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 80: Test timeout computed to be: 3600 80: Done 39/120 Test #80: TestSerializeAndersenThermostat ............... Passed 0.01 sec test 81 Start 81: TestSerializeCMAPTorsion 81: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCMAPTorsion 81: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 81: Test timeout computed to be: 3600 81: Done 40/120 Test #81: TestSerializeCMAPTorsion ...................... Passed 0.01 sec test 82 Start 82: TestSerializeCMMotionRemover 82: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCMMotionRemover 82: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 82: Test timeout computed to be: 3600 82: Done 41/120 Test #82: TestSerializeCMMotionRemover .................. Passed 0.01 sec test 83 Start 83: TestSerializeCustomAngleForce 83: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomAngleForce 83: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 83: Test timeout computed to be: 3600 83: Done 42/120 Test #83: TestSerializeCustomAngleForce ................. Passed 0.01 sec test 84 Start 84: TestSerializeCustomBondForce 84: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomBondForce 84: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 84: Test timeout computed to be: 3600 84: Done 43/120 Test #84: TestSerializeCustomBondForce .................. Passed 0.02 sec test 85 Start 85: TestSerializeCustomCVForce 85: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomCVForce 85: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 85: Test timeout computed to be: 3600 85: Done 44/120 Test #85: TestSerializeCustomCVForce .................... Passed 0.01 sec test 86 Start 86: TestSerializeCustomCentroidBondForce 86: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomCentroidBondForce 86: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 86: Test timeout computed to be: 3600 86: Done 45/120 Test #86: TestSerializeCustomCentroidBondForce .......... Passed 0.01 sec test 87 Start 87: TestSerializeCustomCompoundBondForce 87: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomCompoundBondForce 87: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 87: Test timeout computed to be: 3600 33: Done 46/120 Test #33: TestReferenceMonteCarloFlexibleBarostat ....... Passed 0.76 sec test 88 Start 88: TestSerializeCustomExternalForce 88: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomExternalForce 88: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 88: Test timeout computed to be: 3600 87: Done 47/120 Test #87: TestSerializeCustomCompoundBondForce .......... Passed 0.02 sec test 89 Start 89: TestSerializeCustomGBForce 89: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomGBForce 89: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 89: Test timeout computed to be: 3600 88: Done 89: Done 48/120 Test #88: TestSerializeCustomExternalForce .............. Passed 0.02 sec 49/120 Test #89: TestSerializeCustomGBForce .................... Passed 0.01 sec test 90 Start 90: TestSerializeCustomHbondForce 90: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomHbondForce 90: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 90: Test timeout computed to be: 3600 test 91 Start 91: TestSerializeCustomManyParticleForce 91: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomManyParticleForce 91: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 91: Test timeout computed to be: 3600 90: Done 50/120 Test #90: TestSerializeCustomHbondForce ................. Passed 0.01 sec test 92 Start 92: TestSerializeCustomNonbondedForce 92: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomNonbondedForce 92: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 92: Test timeout computed to be: 3600 91: Done 51/120 Test #91: TestSerializeCustomManyParticleForce .......... Passed 0.01 sec test 93 Start 93: TestSerializeCustomTorsionForce 93: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeCustomTorsionForce 93: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 93: Test timeout computed to be: 3600 92: Done 52/120 Test #92: TestSerializeCustomNonbondedForce ............. Passed 0.01 sec test 94 Start 94: TestSerializeGBSAOBCForce 94: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeGBSAOBCForce 94: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 94: Test timeout computed to be: 3600 32: Done 93: Done 94: Done 53/120 Test #32: TestReferenceMonteCarloBarostat ............... Passed 0.81 sec 54/120 Test #93: TestSerializeCustomTorsionForce ............... Passed 0.01 sec 55/120 Test #94: TestSerializeGBSAOBCForce ..................... Passed 0.01 sec test 95 Start 95: TestSerializeGayBerneForce 95: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeGayBerneForce 95: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 95: Test timeout computed to be: 3600 test 96 Start 96: TestSerializeHarmonicAngleForce 96: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeHarmonicAngleForce 96: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 96: Test timeout computed to be: 3600 test 97 Start 97: TestSerializeHarmonicBondForce 97: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeHarmonicBondForce 97: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 97: Test timeout computed to be: 3600 95: Done 56/120 Test #95: TestSerializeGayBerneForce .................... Passed 0.01 sec test 98 Start 98: TestSerializeIntegrator 98: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeIntegrator 98: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 98: Test timeout computed to be: 3600 96: Done 57/120 Test #96: TestSerializeHarmonicAngleForce ............... Passed 0.01 sec test 99 Start 99: TestSerializeMonteCarloAnisotropicBarostat 99: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeMonteCarloAnisotropicBarostat 99: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 99: Test timeout computed to be: 3600 97: Done 58/120 Test #97: TestSerializeHarmonicBondForce ................ Passed 0.02 sec test 100 Start 100: TestSerializeMonteCarloBarostat 100: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeMonteCarloBarostat 100: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 100: Test timeout computed to be: 3600 98: Done 59/120 Test #98: TestSerializeIntegrator ....................... Passed 0.02 sec test 101 Start 101: TestSerializeMonteCarloFlexibleBarostat 101: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeMonteCarloFlexibleBarostat 101: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 101: Test timeout computed to be: 3600 100: Done 60/120 Test #100: TestSerializeMonteCarloBarostat ............... Passed 0.01 sec test 102 Start 102: TestSerializeMonteCarloMembraneBarostat 102: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeMonteCarloMembraneBarostat 102: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 102: Test timeout computed to be: 3600 99: Done 61/120 Test #99: TestSerializeMonteCarloAnisotropicBarostat .... Passed 0.02 sec test 103 Start 103: TestSerializeNonbondedForce 103: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeNonbondedForce 103: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 103: Test timeout computed to be: 3600 101: Done 62/120 Test #101: TestSerializeMonteCarloFlexibleBarostat ....... Passed 0.02 sec test 104 Start 104: TestSerializeNoseHooverIntegrator 104: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeNoseHooverIntegrator 104: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 104: Test timeout computed to be: 3600 102: Done 63/120 Test #102: TestSerializeMonteCarloMembraneBarostat ....... Passed 0.02 sec test 105 Start 105: TestSerializePeriodicTorsionForce 105: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializePeriodicTorsionForce 105: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 105: Test timeout computed to be: 3600 103: Done 64/120 Test #103: TestSerializeNonbondedForce ................... Passed 0.03 sec test 106 Start 106: TestSerializeRBTorsionForce 106: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeRBTorsionForce 106: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 106: Test timeout computed to be: 3600 1: Done 65/120 Test #1: TestReferenceATMForce ......................... Passed 0.94 sec 104: Done 66/120 Test #104: TestSerializeNoseHooverIntegrator ............. Passed 0.02 sec 105: Done 67/120 Test #105: TestSerializePeriodicTorsionForce ............. Passed 0.02 sec test 107 Start 107: TestSerializeRMSDForce 107: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeRMSDForce 107: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 107: Test timeout computed to be: 3600 test 108 Start 108: TestSerializeState 108: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeState 108: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 108: Test timeout computed to be: 3600 test 109 Start 109: TestSerializeSystem 109: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeSystem 109: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 109: Test timeout computed to be: 3600 106: Done 107: Done 68/120 Test #106: TestSerializeRBTorsionForce ................... Passed 0.02 sec 69/120 Test #107: TestSerializeRMSDForce ........................ Passed 0.02 sec test 110 Start 110: TestSerializeTabulatedFunctions 110: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSerializeTabulatedFunctions 110: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/serialization/tests 110: Test timeout computed to be: 3600 test 111 Start 111: TestEnforcePeriodicBox 111: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestEnforcePeriodicBox 111: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 111: Test timeout computed to be: 3600 109: Done 70/120 Test #109: TestSerializeSystem ........................... Passed 0.01 sec test 112 Start 112: TestFindExclusions 112: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestFindExclusions 112: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 112: Test timeout computed to be: 3600 47: Done 112: Done 71/120 Test #112: TestFindExclusions ............................ Passed 0.01 sec 110: Done test 113 Start 113: TestFindMolecules 113: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestFindMolecules 113: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 113: Test timeout computed to be: 3600 72/120 Test #47: TestCpuCheckpoints ............................ Passed 0.88 sec 73/120 Test #110: TestSerializeTabulatedFunctions ............... Passed 0.01 sec test 114 Start 114: TestParser 114: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestParser 114: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 114: Test timeout computed to be: 3600 test 115 Start 115: TestSplineFitter 115: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSplineFitter 115: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 115: Test timeout computed to be: 3600 108: Done 111: Done 74/120 Test #108: TestSerializeState ............................ Passed 0.04 sec 75/120 Test #111: TestEnforcePeriodicBox ........................ Passed 0.02 sec test 116 Start 116: TestSystem 116: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestSystem 116: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 116: Test timeout computed to be: 3600 test 117 Start 117: TestVectorExpression 117: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestVectorExpression 117: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 117: Test timeout computed to be: 3600 113: Done 76/120 Test #113: TestFindMolecules ............................. Passed 0.02 sec 116: Done test 118 Start 118: TestVectorize 118: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestVectorize 118: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 118: Test timeout computed to be: 3600 117: Done 77/120 Test #116: TestSystem .................................... Passed 0.01 sec 78/120 Test #117: TestVectorExpression .......................... Passed 0.01 sec test 119 Start 119: TestVectorizeAvx 119: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestVectorizeAvx 119: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 119: Test timeout computed to be: 3600 test 120 Start 120: TestVectorizeAvx2 120: Test command: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/TestVectorizeAvx2 120: Working Directory: /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/tests 120: Test timeout computed to be: 3600 118: Done 119: Done 79/120 Test #118: TestVectorize ................................. Passed 0.01 sec 80/120 Test #119: TestVectorizeAvx .............................. Passed 0.01 sec 120: Done 81/120 Test #120: TestVectorizeAvx2 ............................. Passed 0.01 sec 115: Done 82/120 Test #115: TestSplineFitter .............................. Passed 0.05 sec 114: square(x) 114: cube(x) 114: cube(x) 114: 6*(x) 114: recip(1+(x)) 114: sqrt(x) 114: 1 114: Done 83/120 Test #114: TestParser .................................... Passed 0.18 sec 77: Done 84/120 Test #77: TestCpuPme .................................... Passed 0.81 sec 45: Done 85/120 Test #45: TestReferenceVerletIntegrator ................. Passed 1.25 sec 70: Done 86/120 Test #70: TestReferenceHippoNonbondedForce .............. Passed 1.28 sec 65: Done 87/120 Test #65: TestReferenceAmoebaExtrapolatedPolarization ... Passed 1.40 sec 36: Done 88/120 Test #36: TestReferenceNonbondedForce ................... Passed 1.65 sec 22: Done 89/120 Test #22: TestReferenceEwald ............................ Passed 1.75 sec 55: Done 90/120 Test #55: TestCpuGBSAOBCForce ........................... Passed 1.84 sec 29: Done 91/120 Test #29: TestReferenceLangevinMiddleIntegrator ......... Passed 1.98 sec 17: Done 34: Done 92/120 Test #34: TestReferenceMonteCarloMembraneBarostat ....... Passed 2.17 sec 16: Done 93/120 Test #16: TestReferenceCustomHbondForce ................. Passed 3.65 sec 94/120 Test #17: TestReferenceCustomIntegrator ................. Passed 3.65 sec 23: Done 95/120 Test #23: TestReferenceGBSAOBCForce ..................... Passed 3.67 sec 21: Done 96/120 Test #21: TestReferenceDispersionPME .................... Passed 3.87 sec 30: Done 97/120 Test #30: TestReferenceLocalEnergyMinimizer ............. Passed 3.89 sec 50: Done 98/120 Test #50: TestCpuCustomGBForce .......................... Passed 4.12 sec 67: Done 99/120 Test #67: TestReferenceAmoebaMultipoleForce ............. Passed 4.04 sec 54: Done 100/120 Test #54: TestCpuEwald .................................. Passed 4.15 sec 61: Done 101/120 Test #61: TestCpuNonbondedForce ......................... Passed 4.14 sec 53: Done 102/120 Test #53: TestCpuDispersionPME .......................... Passed 4.21 sec 56: Done 103/120 Test #56: TestCpuGayBerneForce .......................... Passed 4.25 sec 31: Done 104/120 Test #31: TestReferenceMonteCarloAnisotropicBarostat .... Passed 4.51 sec 37: Done 105/120 Test #37: TestReferenceNoseHooverIntegrator ............. Passed 7.76 sec 64: Done 106/120 Test #64: TestCpuSettle ................................. Passed 7.92 sec 44: Done 107/120 Test #44: TestReferenceVariableVerletIntegrator ......... Passed 8.13 sec 75: Done 108/120 Test #75: TestReferenceDrudeNoseHoover .................. Passed 10.21 sec 66: Done 109/120 Test #66: TestReferenceAmoebaGeneralizedKirkwoodForce ... Passed 10.95 sec 52: Done 110/120 Test #52: TestCpuCustomNonbondedForce ................... Passed 16.78 sec 76: Done 111/120 Test #76: TestReferenceDrudeSCFIntegrator ............... Passed 18.92 sec 74: Done 112/120 Test #74: TestReferenceDrudeLangevinIntegrator .......... Passed 29.07 sec 48: Done 113/120 Test #48: TestCpuCompoundIntegrator ..................... Passed 30.43 sec 43: Done 114/120 Test #43: TestReferenceVariableLangevinIntegrator ....... Passed 34.43 sec 18: Done 115/120 Test #18: TestReferenceCustomManyParticleForce .......... Passed 43.35 sec 59: Done 116/120 Test #59: TestCpuLangevinMiddleIntegrator ............... Passed 44.85 sec 58: Done 117/120 Test #58: TestCpuLangevinIntegrator ..................... Passed 50.59 sec 51: Done 118/120 Test #51: TestCpuCustomManyParticleForce ................ Passed 53.66 sec 19: Done 119/120 Test #19: TestReferenceCustomNonbondedForce ............. Passed 56.83 sec 72: Done 120/120 Test #72: TestReferenceRpmd ............................. Passed 136.80 sec 100% tests passed, 0 tests failed out of 120 Total Test time (real) = 137.05 sec make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' pybuild --dir obj-x86_64-linux-gnu/python --test # TODO: Run tests in parallel I: pybuild pybuild:308: cp -r /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build I: pybuild base:311: cd /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build; python3.13 -m unittest discover -v --start-directory tests -p 'Test*' /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' os.environ['PATH'] = '%(lib)s;%(lib)s\plugins;%(path)s' % { /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/openmm.py:19427: SyntaxWarning: invalid escape sequence '\S' match = re.search("<([^?]\S*)", inputString) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' if not re.match("pdb.%2s.\.ent\.gz" % subdir , pdb_file): /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' if not re.match("pdb.%2s.\.ent\.gz" % subdir , pdb_file): /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' "(?:_(.+?)[.](\S+))" "|" # _category.attribute /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' "(?:['](.*?)(?:[']\s|[']$))" "|" # single quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' "(?:[\"](.*?)(?:[\"]\s|[\"]$))" "|" # double quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' "(?:\s*#.*$)" "|" # comments (dumped) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' "(\S+)" # unquoted words /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' "(?:_(.+?)[.](\S+))" "|" # _category.attribute /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' "(?:['\"](.*?)(?:['\"]\s|['\"]$))" "|" # quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' "(?:\s*#.*$)" "|" # comments (dumped) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' "(\S+)" # unquoted words /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' FORMAT_RE_PATTERN=re.compile("([0-9]+)\(?([a-zA-Z]+)([0-9]+)\.?([0-9]*)\)?") /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' return match('^[-+]?[0-9]*\.?[0-9]*([eEdD][-+]?[0-9]+)?$',word) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' pattern = re.compile('bias_(.*)_(.*)\.npy') testATMForce (TestAPIUnits.TestAPIUnits.testATMForce) Tests the ATMForce API features ... ok testAmoebaMultipoleForce (TestAPIUnits.TestAPIUnits.testAmoebaMultipoleForce) Tests the AmoebaMultipoleForce API features ... ok testAmoebaTorsionTorsionForce (TestAPIUnits.TestAPIUnits.testAmoebaTorsionTorsionForce) Tests the AmoebaTorsionTorsionForce API features ... ok testAmoebaVdwForce (TestAPIUnits.TestAPIUnits.testAmoebaVdwForce) Tests the AmoebaVdwForce API features ... ok testAmoebaWcaDispersionForce (TestAPIUnits.TestAPIUnits.testAmoebaWcaDispersionForce) Tests the AmoebaWcaDispersionForce API features ... ok testAndersenThermostat (TestAPIUnits.TestAPIUnits.testAndersenThermostat) Tests the AndersenThermostat API features ... ok testBrownianIntegrator (TestAPIUnits.TestAPIUnits.testBrownianIntegrator) Tests the BrownianIntegrator API features ... ok testCmapForce (TestAPIUnits.TestAPIUnits.testCmapForce) Tests the CMAPTorsionForce API features ... ok testCustomAngleForce (TestAPIUnits.TestAPIUnits.testCustomAngleForce) Tests the CustomAngleForce API features ... ok testCustomBondForce (TestAPIUnits.TestAPIUnits.testCustomBondForce) Tests the CustomBondForce API features ... ok testCustomCompoundBondForce (TestAPIUnits.TestAPIUnits.testCustomCompoundBondForce) Tests the CustomCompoundBondForce API features ... ok testCustomExternalForce (TestAPIUnits.TestAPIUnits.testCustomExternalForce) Tests the CustomExternalForce API features ... ok testCustomGBForce (TestAPIUnits.TestAPIUnits.testCustomGBForce) Tests the CustomGBForce API features ... ok testCustomHBondForce (TestAPIUnits.TestAPIUnits.testCustomHBondForce) Tests the CustomHbondForce API features ... ok testCustomIntegrator (TestAPIUnits.TestAPIUnits.testCustomIntegrator) Tests the CustomIntegrator API features ... ok testCustomManyParticleForce (TestAPIUnits.TestAPIUnits.testCustomManyParticleForce) Tests the CustomManyParticleForce API features ... ok testCustomNonbondedForce (TestAPIUnits.TestAPIUnits.testCustomNonbondedForce) Tests the CustomNonbondedForce API features ... ok testCustomTorsionForce (TestAPIUnits.TestAPIUnits.testCustomTorsionForce) Tests the CustomTorsionForce API features ... ok testDrudeForce (TestAPIUnits.TestAPIUnits.testDrudeForce) Tests the DrudeForce API features ... ok testDrudeLangevinIntegrator (TestAPIUnits.TestAPIUnits.testDrudeLangevinIntegrator) Tests the DrudeLangevinIntegrator API features ... ok testDrudeNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testDrudeNoseHooverIntegrator) Tests the DrudeNoseHooverIntegrator API features ... ok testDrudeSCFIntegrator (TestAPIUnits.TestAPIUnits.testDrudeSCFIntegrator) Tests the DrudeSCFIntegrator API features ... ok testGeneralizedKirkwood (TestAPIUnits.TestAPIUnits.testGeneralizedKirkwood) Tests the AmoebaGeneralizedKirkwoodForce API features ... ok testHarmonicAngleForce (TestAPIUnits.TestAPIUnits.testHarmonicAngleForce) Tests HarmonicAngleForce API features ... ok testHarmonicBondForce (TestAPIUnits.TestAPIUnits.testHarmonicBondForce) Tests HarmonicBondForce API features ... ok testLangevinIntegrator (TestAPIUnits.TestAPIUnits.testLangevinIntegrator) Tests the LangevinIntegrator API features ... ok testMonteCarloMembraneBarostat (TestAPIUnits.TestAPIUnits.testMonteCarloMembraneBarostat) Tests the MonteCarloMembraneBarostat API features ... ok testNonbondedForce (TestAPIUnits.TestAPIUnits.testNonbondedForce) Tests the NonbondedForce API features ... ok testNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testNoseHooverIntegrator) Tests the NoseHooverIntegrator API features ... ok testPeriodicTorsionForce (TestAPIUnits.TestAPIUnits.testPeriodicTorsionForce) Tests PeriodicTorsionForce API features ... ok testRBTorsionForce (TestAPIUnits.TestAPIUnits.testRBTorsionForce) Tests the RBTorsionForce API features ... ok testVariableLangevinIntegrator (TestAPIUnits.TestAPIUnits.testVariableLangevinIntegrator) Tests the VariableLangevinIntegrator API features ... ok testVariableVerletIntegrator (TestAPIUnits.TestAPIUnits.testVariableVerletIntegrator) Tests the VariableVerletIntegrator API features ... ok testVerletIntegrator (TestAPIUnits.TestAPIUnits.testVerletIntegrator) Tests the VerletIntegrator API features ... ok test2ParticlesNonbonded (TestATMForce.TestATMForce.test2ParticlesNonbonded) Test for a Nonbonded force previously added to the System ... ok test_CrdBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBox) Test parsing ASCII restarts with only crds and box ... ok test_CrdBoxTruncoct (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBoxTruncoct) ... ok test_CrdOnly (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdOnly) ... ok test_CrdVel (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVel) ... ok test_CrdVelBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVelBox) Test parsing ASCII restarts with crds, vels, and box ... ok test_NetCDF (TestAmberInpcrdFile.TestAmberInpcrdFile.test_NetCDF) Test NetCDF restart file parsing ... ok testAmberCMAP (TestAmberPrmtopFile.TestAmberPrmtopFile.testAmberCMAP) Check that CMAP energy calcultion compared to AMber. ... ok testChamber (TestAmberPrmtopFile.TestAmberPrmtopFile.testChamber) Test a prmtop file created with Chamber. ... ok testEPConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.testEPConstraints) Test different types of constraints when using extra particles ... ok testGBneckRadii (TestAmberPrmtopFile.TestAmberPrmtopFile.testGBneckRadii) Tests that GBneck radii limits are correctly enforced ... ok testNucleicGBParametes (TestAmberPrmtopFile.TestAmberPrmtopFile.testNucleicGBParametes) Test that correct GB parameters are used for nucleic acids. ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model GBn warnings.warn( ok testSwitchFunction (TestAmberPrmtopFile.TestAmberPrmtopFile.testSwitchFunction) Tests the switching function option in AmberPrmtopFile ... ok testWaterBonds (TestAmberPrmtopFile.TestAmberPrmtopFile.testWaterBonds) Test that water molecules have the right set of bonds ... ok test_Cutoff (TestAmberPrmtopFile.TestAmberPrmtopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestAmberPrmtopFile.TestAmberPrmtopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HAngle (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HAngle) Test that HAngle constraints are properly handled for all hydrogens ... ok test_HydrogenMass (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model HCT warnings.warn( ok test_ImplicitSolventForces (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventParameters) Test that parameters are set correctly for the different types of implicit solvent. ... ok test_ImplicitSolventZeroSA (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventZeroSA) Test that requesting gbsaModel=None yields a surface area energy of 0 when ... ok test_LJ1264 (TestAmberPrmtopFile.TestAmberPrmtopFile.test_LJ1264) Test prmtop with 12-6-4 vdW potential implemented ... ok test_NBFIX_LongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_LongRange) Test prmtop files with NBFIX LJ modifications w/ long-range correction ... ok test_NBFIX_noLongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_noLongRange) Test prmtop files with NBFIX LJ modifications w/out long-range correction ... ok test_NonbondedMethod (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_RemoveCMMotion (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_RigidWaterAndConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_triclinicParm (TestAmberPrmtopFile.TestAmberPrmtopFile.test_triclinicParm) Check that triclinic unit cells work correctly ... ok test_with_dcd_reporter (TestAmberPrmtopFile.TestAmberPrmtopFile.test_with_dcd_reporter) Check that an amber simulation like the docs example works with a DCD reporter. ... ok test_createCheckpoint (TestBytes.TestBytes.test_createCheckpoint) ... ok testSystemOptions (TestCharmmFiles.TestCharmmFiles.testSystemOptions) Test various options in CharmmPsfFile.createSystem ... ok test_Constraints (TestCharmmFiles.TestCharmmFiles.test_Constraints) Test that bond and angles constraints are correctly added into the system ... ok test_Constraints_charmm (TestCharmmFiles.TestCharmmFiles.test_Constraints_charmm) Tests that CHARMM and OpenMM implementation of CHARMM force field produce the same constraints and energy ... ok test_Cutoff (TestCharmmFiles.TestCharmmFiles.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Drude (TestCharmmFiles.TestCharmmFiles.test_Drude) Test CHARMM systems with Drude force field ... skipped 'Skipping test failing due to missing platforms' test_DrudeMass (TestCharmmFiles.TestCharmmFiles.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_HydrogenMass (TestCharmmFiles.TestCharmmFiles.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolvent) Test implicit solvent using the implicitSolvent parameter. ... ok test_ImplicitSolventForces (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly. ... ok test_Impropers (TestCharmmFiles.TestCharmmFiles.test_Impropers) Test CHARMM improper torsions. ... ok test_InsCode (TestCharmmFiles.TestCharmmFiles.test_InsCode) Test the parsing of PSF files that contain insertion codes in their residue numbers ... ok test_Lonepair (TestCharmmFiles.TestCharmmFiles.test_Lonepair) Test the lonepair facilities, in particular the colinear type of lonepairs ... ok test_NBFIX (TestCharmmFiles.TestCharmmFiles.test_NBFIX) Tests CHARMM systems with NBFIX Lennard-Jones modifications ... ok test_NBFIX14 (TestCharmmFiles.TestCharmmFiles.test_NBFIX14) Tests CHARMM systems with NBFIX modifications to 1-4 interactions ... ok test_NBThole (TestCharmmFiles.TestCharmmFiles.test_NBThole) Tests CHARMM system with NBTHole ... skipped 'Skipping test failing due to missing platforms' test_NBXMod (TestCharmmFiles.TestCharmmFiles.test_NBXMod) Test that all values of NBXMod are interpreted correctly. ... ok test_NoLongRangeCorrection (TestCharmmFiles.TestCharmmFiles.test_NoLongRangeCorrection) Test that long range correction is disabled. ... ok test_NoPsfWarning (TestCharmmFiles.TestCharmmFiles.test_NoPsfWarning) Test that PSF warning is not thrown. ... ok test_NonbondedMethod (TestCharmmFiles.TestCharmmFiles.test_NonbondedMethod) Test both non-periodic methods for the systems ... ok test_Nonbonded_Exclusion (TestCharmmFiles.TestCharmmFiles.test_Nonbonded_Exclusion) Test that the 1-2, 1-3 and 1-4 pairs are correctly excluded or scaled. ... ok test_PSFSetUnitCellDimensions (TestCharmmFiles.TestCharmmFiles.test_PSFSetUnitCellDimensions) Test that setting the box via unit cell dimensions works correctly. ... ok test_PermissiveRead (TestCharmmFiles.TestCharmmFiles.test_PermissiveRead) Compare permissive and strict reading of Charmm parameters ... ok test_RemoveCMMotion (TestCharmmFiles.TestCharmmFiles.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_Residues (TestCharmmFiles.TestCharmmFiles.test_Residues) Test that residues are read correctly, even if they have the same RESID while being in separate segments. ... ok test_1 (TestCheckpointReporter.TestCheckpointReporter.test_1) Test CheckpointReporter. ... ok testAppend (TestDcdFile.TestDCDFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestDcdFile.TestDCDFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_dcd (TestDcdFile.TestDCDFile.test_dcd) Test the DCD file ... ok test_Cutoff (TestDesmondDMSFile.TestDesmondDMSFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestDesmondDMSFile.TestDesmondDMSFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HydrogenMass (TestDesmondDMSFile.TestDesmondDMSFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_NonbondedMethod (TestDesmondDMSFile.TestDesmondDMSFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_OPLS1 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS1) Test OPLS potential energy of nabumetone ... ok test_OPLS2 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS2) Test OPLS potential energy of beta-cyclodextrin/nabumetone complex ... ok test_RemoveCMMotion (TestDesmondDMSFile.TestDesmondDMSFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_attributes (TestElement.TestElement.test_attributes) ... ok test_getByMass (TestElement.TestElement.test_getByMass) Tests the getByMass method ... ok test_immutable (TestElement.TestElement.test_immutable) ... ok test_pickleable (TestElement.TestElement.test_pickleable) ... ok test_Amoeba18BPTI (TestForceField.AmoebaTestForceField.test_Amoeba18BPTI) Test that AMOEBA18 computes energies correctly for BPTI. ... skipped 'Skipping test failing due to missing platforms' test_Amoeba18Nucleic (TestForceField.AmoebaTestForceField.test_Amoeba18Nucleic) Test that AMOEBA18 computes energies correctly for DNA and RNA. ... skipped 'Skipping test failing due to missing platforms' test_Cutoff (TestForceField.AmoebaTestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.AmoebaTestForceField.test_DispersionCorrection) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Forces (TestForceField.AmoebaTestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... skipped 'Skipping test failing due to missing platforms' test_NonbondedMethod (TestForceField.AmoebaTestForceField.test_NonbondedMethod) Test both options for the nonbondedMethod parameter. ... ok test_RigidWater (TestForceField.AmoebaTestForceField.test_RigidWater) Test that AMOEBA creates rigid water with the correct geometry. ... ok test_CharmmPolar (TestForceField.TestForceField.test_CharmmPolar) Test the CHARMM polarizable force field. ... skipped 'Skipping test failing due to missing platforms' test_CustomNonbondedGenerator (TestForceField.TestForceField.test_CustomNonbondedGenerator) Test the CustomNonbondedForce generator ... ok test_Cutoff (TestForceField.TestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.TestForceField.test_DispersionCorrection) Test to make sure that the dispersion/long-range correction is set properly. ... ok test_Disulfides (TestForceField.TestForceField.test_Disulfides) Test that various force fields handle disulfides correctly. ... ok test_DrudeMass (TestForceField.TestForceField.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_Forces (TestForceField.TestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_Glycam (TestForceField.TestForceField.test_Glycam) Test computing energy with GLYCAM. ... ok test_HydrogenMass (TestForceField.TestForceField.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_IdenticalTemplates (TestForceField.TestForceField.test_IdenticalTemplates) Test a case where patches produce two identical templates. ... ok test_IgnoreExternalBonds (TestForceField.TestForceField.test_IgnoreExternalBonds) Test the ignoreExternalBonds option ... ok test_ImplicitSolvent (TestForceField.TestForceField.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... ok test_ImplicitSolventForces (TestForceField.TestForceField.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with AmberPrmtopFile. ... ok test_ImplicitSolventParameters (TestForceField.TestForceField.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly ... ok test_ImpropersOrdering (TestForceField.TestForceField.test_ImpropersOrdering) Test correctness of the ordering of atom indexes in improper torsions ... ok test_ImpropersOrdering_smirnoff (TestForceField.TestForceField.test_ImpropersOrdering_smirnoff) Test correctness of the ordering of atom indexes in improper torsions ... ok test_Includes (TestForceField.TestForceField.test_Includes) Test using a ForceField that includes other files. ... ok test_InitializationScript (TestForceField.TestForceField.test_InitializationScript) Test that tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpiaxwov_y/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 889.585s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 400 0 0.0078125 -0.109375 -0.179688 -0.0390625 -0.21875 -0.28125 -0.328125 -0.367188 -0.296875 20000 293.947 0 0.0617676 -0.0443115 -0.0802002 -0.0181885 -0.133484 -0.205811 -0.2323 -0.292419 -0.18396 30000 216.012 0 0.0618582 -0.0439997 -0.0796919 -0.0178566 -0.133566 -0.205587 -0.232048 -0.292047 -0.184006 40000 200 0 0.0618557 -0.043999 -0.0796933 -0.0178571 -0.133567 -0.205585 -0.232054 -0.292044 -0.184009 50000 251.984 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 60000 216.012 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 70000 200 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 80000 293.947 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 90000 370.35 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 100000 251.984 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 110000 251.984 0 0.0618557 -0.043999 -0.0796933 -0.017857 -0.133567 -0.205585 -0.232054 -0.292045 -0.184009 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" I: pybuild pybuild:308: cp -r /build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu/python/tests/systems /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build I: pybuild base:311: cd /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build; python3.12 -m unittest discover -v --start-directory tests -p 'Test*' /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' os.environ['PATH'] = '%(lib)s;%(lib)s\plugins;%(path)s' % { /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/openmm.py:19427: SyntaxWarning: invalid escape sequence '\S' match = re.search("<([^?]\S*)", inputString) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' if not re.match("pdb.%2s.\.ent\.gz" % subdir , pdb_file): /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' if not re.match("pdb.%2s.\.ent\.gz" % subdir , pdb_file): /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' "(?:_(.+?)[.](\S+))" "|" # _category.attribute /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' "(?:['](.*?)(?:[']\s|[']$))" "|" # single quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' "(?:[\"](.*?)(?:[\"]\s|[\"]$))" "|" # double quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' "(?:\s*#.*$)" "|" # comments (dumped) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' "(\S+)" # unquoted words /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' "(?:_(.+?)[.](\S+))" "|" # _category.attribute /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' "(?:['\"](.*?)(?:['\"]\s|['\"]$))" "|" # quoted strings /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' "(?:\s*#.*$)" "|" # comments (dumped) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' "(\S+)" # unquoted words /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' FORMAT_RE_PATTERN=re.compile("([0-9]+)\(?([a-zA-Z]+)([0-9]+)\.?([0-9]*)\)?") /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' return match('^[-+]?[0-9]*\.?[0-9]*([eEdD][-+]?[0-9]+)?$',word) /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' pattern = re.compile('bias_(.*)_(.*)\.npy') testATMForce (TestAPIUnits.TestAPIUnits.testATMForce) Tests the ATMForce API features ... ok testAmoebaMultipoleForce (TestAPIUnits.TestAPIUnits.testAmoebaMultipoleForce) Tests the AmoebaMultipoleForce API features ... ok testAmoebaTorsionTorsionForce (TestAPIUnits.TestAPIUnits.testAmoebaTorsionTorsionForce) Tests the AmoebaTorsionTorsionForce API features ... ok testAmoebaVdwForce (TestAPIUnits.TestAPIUnits.testAmoebaVdwForce) Tests the AmoebaVdwForce API features ... ok testAmoebaWcaDispersionForce (TestAPIUnits.TestAPIUnits.testAmoebaWcaDispersionForce) Tests the AmoebaWcaDispersionForce API features ... ok testAndersenThermostat (TestAPIUnits.TestAPIUnits.testAndersenThermostat) Tests the AndersenThermostat API features ... ok testBrownianIntegrator (TestAPIUnits.TestAPIUnits.testBrownianIntegrator) Tests the BrownianIntegrator API features ... ok testCmapForce (TestAPIUnits.TestAPIUnits.testCmapForce) Tests the CMAPTorsionForce API features ... ok testCustomAngleForce (TestAPIUnits.TestAPIUnits.testCustomAngleForce) Tests the CustomAngleForce API features ... ok testCustomBondForce (TestAPIUnits.TestAPIUnits.testCustomBondForce) Tests the CustomBondForce API features ... ok testCustomCompoundBondForce (TestAPIUnits.TestAPIUnits.testCustomCompoundBondForce) Tests the CustomCompoundBondForce API features ... ok testCustomExternalForce (TestAPIUnits.TestAPIUnits.testCustomExternalForce) Tests the CustomExternalForce API features ... ok testCustomGBForce (TestAPIUnits.TestAPIUnits.testCustomGBForce) Tests the CustomGBForce API features ... ok testCustomHBondForce (TestAPIUnits.TestAPIUnits.testCustomHBondForce) Tests the CustomHbondForce API features ... ok testCustomIntegrator (TestAPIUnits.TestAPIUnits.testCustomIntegrator) Tests the CustomIntegrator API features ... ok testCustomManyParticleForce (TestAPIUnits.TestAPIUnits.testCustomManyParticleForce) Tests the CustomManyParticleForce API features ... ok testCustomNonbondedForce (TestAPIUnits.TestAPIUnits.testCustomNonbondedForce) Tests the CustomNonbondedForce API features ... ok testCustomTorsionForce (TestAPIUnits.TestAPIUnits.testCustomTorsionForce) Tests the CustomTorsionForce API features ... ok testDrudeForce (TestAPIUnits.TestAPIUnits.testDrudeForce) Tests the DrudeForce API features ... ok testDrudeLangevinIntegrator (TestAPIUnits.TestAPIUnits.testDrudeLangevinIntegrator) Tests the DrudeLangevinIntegrator API features ... ok testDrudeNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testDrudeNoseHooverIntegrator) Tests the DrudeNoseHooverIntegrator API features ... ok testDrudeSCFIntegrator (TestAPIUnits.TestAPIUnits.testDrudeSCFIntegrator) Tests the DrudeSCFIntegrator API features ... ok testGeneralizedKirkwood (TestAPIUnits.TestAPIUnits.testGeneralizedKirkwood) Tests the AmoebaGeneralizedKirkwoodForce API features ... ok testHarmonicAngleForce (TestAPIUnits.TestAPIUnits.testHarmonicAngleForce) Tests HarmonicAngleForce API features ... ok testHarmonicBondForce (TestAPIUnits.TestAPIUnits.testHarmonicBondForce) Tests HarmonicBondForce API features ... ok testLangevinIntegrator (TestAPIUnits.TestAPIUnits.testLangevinIntegrator) Tests the LangevinIntegrator API features ... ok testMonteCarloMembraneBarostat (TestAPIUnits.TestAPIUnits.testMonteCarloMembraneBarostat) Tests the MonteCarloMembraneBarostat API features ... ok testNonbondedForce (TestAPIUnits.TestAPIUnits.testNonbondedForce) Tests the NonbondedForce API features ... ok testNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testNoseHooverIntegrator) Tests the NoseHooverIntegrator API features ... ok testPeriodicTorsionForce (TestAPIUnits.TestAPIUnits.testPeriodicTorsionForce) Tests PeriodicTorsionForce API features ... ok testRBTorsionForce (TestAPIUnits.TestAPIUnits.testRBTorsionForce) Tests the RBTorsionForce API features ... ok testVariableLangevinIntegrator (TestAPIUnits.TestAPIUnits.testVariableLangevinIntegrator) Tests the VariableLangevinIntegrator API features ... ok testVariableVerletIntegrator (TestAPIUnits.TestAPIUnits.testVariableVerletIntegrator) Tests the VariableVerletIntegrator API features ... ok testVerletIntegrator (TestAPIUnits.TestAPIUnits.testVerletIntegrator) Tests the VerletIntegrator API features ... ok test2ParticlesNonbonded (TestATMForce.TestATMForce.test2ParticlesNonbonded) Test for a Nonbonded force previously added to the System ... ok test_CrdBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBox) Test parsing ASCII restarts with only crds and box ... ok test_CrdBoxTruncoct (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBoxTruncoct) ... ok test_CrdOnly (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdOnly) ... ok test_CrdVel (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVel) ... ok test_CrdVelBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVelBox) Test parsing ASCII restarts with crds, vels, and box ... ok test_NetCDF (TestAmberInpcrdFile.TestAmberInpcrdFile.test_NetCDF) Test NetCDF restart file parsing ... ok testAmberCMAP (TestAmberPrmtopFile.TestAmberPrmtopFile.testAmberCMAP) Check that CMAP energy calcultion compared to AMber. ... ok testChamber (TestAmberPrmtopFile.TestAmberPrmtopFile.testChamber) Test a prmtop file created with Chamber. ... ok testEPConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.testEPConstraints) Test different types of constraints when using extra particles ... ok testGBneckRadii (TestAmberPrmtopFile.TestAmberPrmtopFile.testGBneckRadii) Tests that GBneck radii limits are correctly enforced ... ok testNucleicGBParametes (TestAmberPrmtopFile.TestAmberPrmtopFile.testNucleicGBParametes) Test that correct GB parameters are used for nucleic acids. ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model GBn warnings.warn( ok testSwitchFunction (TestAmberPrmtopFile.TestAmberPrmtopFile.testSwitchFunction) Tests the switching function option in AmberPrmtopFile ... ok testWaterBonds (TestAmberPrmtopFile.TestAmberPrmtopFile.testWaterBonds) Test that water molecules have the right set of bonds ... ok test_Cutoff (TestAmberPrmtopFile.TestAmberPrmtopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestAmberPrmtopFile.TestAmberPrmtopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HAngle (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HAngle) Test that HAngle constraints are properly handled for all hydrogens ... ok test_HydrogenMass (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model HCT warnings.warn( ok test_ImplicitSolventForces (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventParameters) Test that parameters are set correctly for the different types of implicit solvent. ... ok test_ImplicitSolventZeroSA (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventZeroSA) Test that requesting gbsaModel=None yields a surface area energy of 0 when ... ok test_LJ1264 (TestAmberPrmtopFile.TestAmberPrmtopFile.test_LJ1264) Test prmtop with 12-6-4 vdW potential implemented ... ok test_NBFIX_LongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_LongRange) Test prmtop files with NBFIX LJ modifications w/ long-range correction ... ok test_NBFIX_noLongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_noLongRange) Test prmtop files with NBFIX LJ modifications w/out long-range correction ... ok test_NonbondedMethod (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_RemoveCMMotion (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_RigidWaterAndConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_triclinicParm (TestAmberPrmtopFile.TestAmberPrmtopFile.test_triclinicParm) Check that triclinic unit cells work correctly ... ok test_with_dcd_reporter (TestAmberPrmtopFile.TestAmberPrmtopFile.test_with_dcd_reporter) Check that an amber simulation like the docs example works with a DCD reporter. ... ok test_createCheckpoint (TestBytes.TestBytes.test_createCheckpoint) ... ok testSystemOptions (TestCharmmFiles.TestCharmmFiles.testSystemOptions) Test various options in CharmmPsfFile.createSystem ... ok test_Constraints (TestCharmmFiles.TestCharmmFiles.test_Constraints) Test that bond and angles constraints are correctly added into the system ... ok test_Constraints_charmm (TestCharmmFiles.TestCharmmFiles.test_Constraints_charmm) Tests that CHARMM and OpenMM implementation of CHARMM force field produce the same constraints and energy ... ok test_Cutoff (TestCharmmFiles.TestCharmmFiles.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Drude (TestCharmmFiles.TestCharmmFiles.test_Drude) Test CHARMM systems with Drude force field ... skipped 'Skipping test failing due to missing platforms' test_DrudeMass (TestCharmmFiles.TestCharmmFiles.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_HydrogenMass (TestCharmmFiles.TestCharmmFiles.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolvent) Test implicit solvent using the implicitSolvent parameter. ... ok test_ImplicitSolventForces (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly. ... ok test_Impropers (TestCharmmFiles.TestCharmmFiles.test_Impropers) Test CHARMM improper torsions. ... ok test_InsCode (TestCharmmFiles.TestCharmmFiles.test_InsCode) Test the parsing of PSF files that contain insertion codes in their residue numbers ... ok test_Lonepair (TestCharmmFiles.TestCharmmFiles.test_Lonepair) Test the lonepair facilities, in particular the colinear type of lonepairs ... ok test_NBFIX (TestCharmmFiles.TestCharmmFiles.test_NBFIX) Tests CHARMM systems with NBFIX Lennard-Jones modifications ... ok test_NBFIX14 (TestCharmmFiles.TestCharmmFiles.test_NBFIX14) Tests CHARMM systems with NBFIX modifications to 1-4 interactions ... ok test_NBThole (TestCharmmFiles.TestCharmmFiles.test_NBThole) Tests CHARMM system with NBTHole ... skipped 'Skipping test failing due to missing platforms' test_NBXMod (TestCharmmFiles.TestCharmmFiles.test_NBXMod) Test that all values of NBXMod are interpreted correctly. ... ok test_NoLongRangeCorrection (TestCharmmFiles.TestCharmmFiles.test_NoLongRangeCorrection) Test that long range correction is disabled. ... ok test_NoPsfWarning (TestCharmmFiles.TestCharmmFiles.test_NoPsfWarning) Test that PSF warning is not thrown. ... ok test_NonbondedMethod (TestCharmmFiles.TestCharmmFiles.test_NonbondedMethod) Test both non-periodic methods for the systems ... ok test_Nonbonded_Exclusion (TestCharmmFiles.TestCharmmFiles.test_Nonbonded_Exclusion) Test that the 1-2, 1-3 and 1-4 pairs are correctly excluded or scaled. ... ok test_PSFSetUnitCellDimensions (TestCharmmFiles.TestCharmmFiles.test_PSFSetUnitCellDimensions) Test that setting the box via unit cell dimensions works correctly. ... ok test_PermissiveRead (TestCharmmFiles.TestCharmmFiles.test_PermissiveRead) Compare permissive and strict reading of Charmm parameters ... ok test_RemoveCMMotion (TestCharmmFiles.TestCharmmFiles.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_Residues (TestCharmmFiles.TestCharmmFiles.test_Residues) Test that residues are read correctly, even if they have the same RESID while being in separate segments. ... ok test_1 (TestCheckpointReporter.TestCheckpointReporter.test_1) Test CheckpointReporter. ... ok testAppend (TestDcdFile.TestDCDFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestDcdFile.TestDCDFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_dcd (TestDcdFile.TestDCDFile.test_dcd) Test the DCD file ... ok test_Cutoff (TestDesmondDMSFile.TestDesmondDMSFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestDesmondDMSFile.TestDesmondDMSFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HydrogenMass (TestDesmondDMSFile.TestDesmondDMSFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_NonbondedMethod (TestDesmondDMSFile.TestDesmondDMSFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_OPLS1 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS1) Test OPLS potential energy of nabumetone ... ok test_OPLS2 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS2) Test OPLS potential energy of beta-cyclodextrin/nabumetone complex ... ok test_RemoveCMMotion (TestDesmondDMSFile.TestDesmondDMSFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_attributes (TestElement.TestElement.test_attributes) ... ok test_getByMass (TestElement.TestElement.test_getByMass) Tests the getByMass method ... ok test_immutable (TestElement.TestElement.test_immutable) ... ok test_pickleable (TestElement.TestElement.test_pickleable) ... ok test_Amoeba18BPTI (TestForceField.AmoebaTestForceField.test_Amoeba18BPTI) Test that AMOEBA18 computes energies correctly for BPTI. ... skipped 'Skipping test failing due to missing platforms' test_Amoeba18Nucleic (TestForceField.AmoebaTestForceField.test_Amoeba18Nucleic) Test that AMOEBA18 computes energies correctly for DNA and RNA. ... skipped 'Skipping test failing due to missing platforms' test_Cutoff (TestForceField.AmoebaTestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.AmoebaTestForceField.test_DispersionCorrection) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Forces (TestForceField.AmoebaTestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... skipped 'Skipping test failing due to missing platforms' test_NonbondedMethod (TestForceField.AmoebaTestForceField.test_NonbondedMethod) Test both options for the nonbondedMethod parameter. ... ok test_RigidWater (TestForceField.AmoebaTestForceField.test_RigidWater) Test that AMOEBA creates rigid water with the correct geometry. ... ok test_CharmmPolar (TestForceField.TestForceField.test_CharmmPolar) Test the CHARMM polarizable force field. ... skipped 'Skipping test failing due to missing platforms' test_CustomNonbondedGenerator (TestForceField.TestForceField.test_CustomNonbondedGenerator) Test the CustomNonbondedForce generator ... ok test_Cutoff (TestForceField.TestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.TestForceField.test_DispersionCorrection) Test to make sure that the dispersion/long-range correction is set properly. ... ok test_Disulfides (TestForceField.TestForceField.test_Disulfides) Test that various force fields handle disulfides correctly. ... ok test_DrudeMass (TestForceField.TestForceField.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_Forces (TestForceField.TestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_Glycam (TestForceField.TestForceField.test_Glycam) Test computing energy with GLYCAM. ... ok test_HydrogenMass (TestForceField.TestForceField.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_IdenticalTemplates (TestForceField.TestForceField.test_IdenticalTemplates) Test a case where patches produce two identical templates. ... ok test_IgnoreExternalBonds (TestForceField.TestForceField.test_IgnoreExternalBonds) Test the ignoreExternalBonds option ... ok test_ImplicitSolvent (TestForceField.TestForceField.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... ok test_ImplicitSolventForces (TestForceField.TestForceField.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with AmberPrmtopFile. ... ok test_ImplicitSolventParameters (TestForceField.TestForceField.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly ... ok test_ImpropersOrdering (TestForceField.TestForceField.test_ImpropersOrdering) Test correctness of the ordering of atom indexes in improper torsions ... ok test_ImpropersOrdering_smirnoff (TestForceField.TestForceField.test_ImpropersOrdering_smirnoff) Test correctness of the ordering of atom indexes in improper torsions ... ok test_Includes (TestForceField.TestForceField.test_Includes) Test using a ForceField that includes other files. ... ok test_InitializationScript (TestForceField.TestForceField.test_InitializationScript) Test that tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpooocc6e2/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 883.707s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 293.947 0 0.140625 0.164062 0.101562 -0.125 -0.164062 -0.179688 0.03125 0.015625 -0.0390625 20000 400 0 0.0806885 0.0823364 0.052063 -0.122498 -0.226379 -0.15094 -0.034668 -0.0620728 -0.157043 30000 233.306 0 0.0812464 0.0822639 0.052371 -0.121963 -0.225701 -0.150775 -0.0345974 -0.062768 -0.156793 40000 342.898 0 0.0812446 0.0822601 0.0523718 -0.121962 -0.225688 -0.15078 -0.0346065 -0.0627887 -0.156806 50000 233.306 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 60000 200 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 70000 293.947 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 80000 370.35 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 90000 400 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 100000 272.158 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 110000 370.35 0 0.0812444 0.0822601 0.0523717 -0.121962 -0.225688 -0.15078 -0.0346066 -0.0627889 -0.156807 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_auto_install -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/openmm-8.1.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.2+dfsg -B/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLArray.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLBondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLCompact.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLContext.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLEvent.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLFFT3D.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLIntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernel.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLNonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParallelKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLProgram.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLSort.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/opencl/opencl.hpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ArrayInterface.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/BondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/CommonKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeArray.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeContext.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeEvent.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeKernel.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterInfo.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeProgram.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ComputeVectorTypes.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ContextSelector.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/ExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/IntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/NonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/common/windowsExportCommon.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/AlignedArray.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuRandom.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/CpuSETTLE.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/cpu/windowsExportCpu.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so" to "" -- Up-to-date: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/OpenMMAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AmoebaGeneralizedKirkwoodForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AmoebaMultipoleForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AmoebaTorsionTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AmoebaVdwForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AmoebaWcaDispersionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/HippoNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/amoebaKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaGeneralizedKirkwoodForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaMultipoleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaTorsionTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaVdwForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaWcaDispersionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/HippoNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RPMDIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RPMDMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RPMDUpdater.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RpmdKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/RPMDMonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportRpmd.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/OpenMMDrude.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeNoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/DrudeSCFIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/DrudeForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportDrude.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/OpenMM.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Kernel.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/KernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/KernelImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Platform.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/PluginInitializer.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/kernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/ATMForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/AndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/BrownianIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CMAPTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CMMotionRemover.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CompoundIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Context.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomCVForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomCentroidBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomCompoundBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomExternalForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomHbondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/CustomTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Force.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/GBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/GayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/HarmonicAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/HarmonicBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Integrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/LangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/LangevinMiddleIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/LocalEnergyMinimizer.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/MonteCarloAnisotropicBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/MonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/MonteCarloFlexibleBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/MonteCarloMembraneBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/NonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/NoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/NoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/OpenMMException.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/PeriodicTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RBTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/RMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/State.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/System.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/TabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Units.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/VariableLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/VariableVerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/Vec3.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/VerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/VirtualSite.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/ATMForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AndersenThermostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/AssertionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CMAPTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CMMotionRemoverImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CompiledExpressionSet.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/ContextImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomCPPForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomCVForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomCentroidBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomCompoundBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomExternalForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomGBForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomHbondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomIntegratorUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomManyParticleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/CustomTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/ForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/GBSAOBCForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/GayBerneForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/MSVC_erfc.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/Messages.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloAnisotropicBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloFlexibleBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloMembraneBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/NonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/OSRngSeed.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/PeriodicTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/RBTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/RMSDForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/SplineFitter.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/ThreadPool.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/VectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/hardware.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/timer.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorize.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx2.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_neon.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_pnacl.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_ppc.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_sse.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/internal/windowsExport.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ObcParameters.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/RealVec.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAngleBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBrownianDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCCMAAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCMAPTorsionIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceConstraintAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceConstraints.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomAngleIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCVForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCentroidBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCompoundBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomExternalIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomGBIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomHbondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomManyParticleIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomNonbondedIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomTorsionIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceGayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceHarmonicBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceKernels.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulomb14.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulombIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLincsAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceObc.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePME.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePairIxn.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePlatform.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePointFunctions.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceProperDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRbDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceSETTLEAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceTabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVirtualSites.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMRealType.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/CompiledExpression.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/CompiledVectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/CustomFunction.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/Exception.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/ExpressionProgram.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/ExpressionTreeNode.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/Operation.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/ParsedExpression.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/Parser.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/lepton/windowsIncludes.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/sfmt/SFMT.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/serialization/SerializationNode.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/serialization/SerializationProxy.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/openmm/serialization/XmlSerializer.h -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/swig/OpenMMSwigHeaders.i -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/include/swig/typemaps.i -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/licenses/GPL.txt -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/licenses/LGPL.txt -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/licenses/Licenses.txt -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloArgon.cpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloSodiumChloride.cpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloEthane.cpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloWaterBox.cpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloArgonInC.c -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInC.c -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloArgonInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/simulateAmber.py -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/simulatePdb.py -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/simulateGromacs.py -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/benchmark.py -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/argon-chemical-potential.py -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/input.inpcrd -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/input.prmtop -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/input.pdb -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/input.gro -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/input.top -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/5dfr_minimized.pdb -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/5dfr_solv-cube_equil.pdb -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/apoa1.pdb -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgon.vcproj -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgon.sln -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInC.sln -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInC.vcproj -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.sln -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.vfproj -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/README.txt -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/Makefile -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/NMakefile -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/MakefileNotes.txt -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/examples/Empty.cpp -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMM.so.8.1 -- Installing: /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/libOpenMM.so make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu' dh_install -plibopenmm8.1 debian/tmp/usr/lib/libOpenMM.so.* usr/lib/x86_64-linux-gnu dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMAmoeba.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMDrude.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMRPMD.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMM.so usr/lib/x86_64-linux-gnu dh_install -plibopenmm-plugins debian/tmp/usr/lib/plugins usr/lib/x86_64-linux-gnu/openmm pybuild --dir obj-x86_64-linux-gnu/python --install I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.2 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/unit copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm/app copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36 copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/pdbxfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/topology.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/gromacstopfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/charmmpsffile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/forcefield.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/charmmcrdfiles.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/element.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/desmonddmsfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/charmmparameterset.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/simulatedtempering.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/metadynamics.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/amberinpcrdfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/simulation.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/checkpointreporter.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/dcdfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/modeller.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/pdbfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/xtcfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/statedatareporter.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/amberprmtopfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/dcdreporter.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/xtcreporter.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/pdbreporter.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__pycache__/gromacsgrofile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/unitcell.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/pdbstructure.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/singleton.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/customgbforces.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__pycache__/argtracker.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/compiled.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/internal/xtc_utils.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/vec3.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/version.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/mtsintegrator.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/amd.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__pycache__/openmm.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/_openmm.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/quantity.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/constants.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/unit_math.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/mymatrix.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/unit_operators.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/standard_dimensions.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/unit.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/baseunit.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/prefix.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/basedimension.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__pycache__/unit_definitions.cpython-313.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.13/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/vec3.py to vec3.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/element.py to element.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/modeller.py to modeller.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:358: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:360: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:361: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:363: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:365: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:416: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:444: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:446: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:448: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:450: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.13/dist-packages/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/topology.py to topology.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/forcefield.py to forcefield.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/simulation.py to simulation.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/prefix.py to prefix.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/unit.py to unit.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/quantity.py to quantity.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/doctests.py to doctests.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/openmm.py to openmm.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/openmm.py:19427: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/__init__.py to __init__.cpython-313.pyc /usr/lib/python3.13/dist-packages/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/amd.py to amd.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/openmm/testInstallation.py to testInstallation.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/openmm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/unit/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/simtk/__init__.py to __init__.cpython-313.pyc running install_egg_info running egg_info creating OpenMM.egg-info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt writing manifest file 'OpenMM.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/OpenMM-8.1.2.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.2 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/unit copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/modeller.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmcrdfiles.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberprmtopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbxfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberinpcrdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/metadynamics.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/forcefield.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/desmonddmsfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/element.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulatedtempering.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/checkpointreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmpsffile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacstopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmparameterset.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulation.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/statedatareporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/topology.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacsgrofile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/xtc_utils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/customgbforces.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/unitcell.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/argtracker.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/singleton.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/pdbstructure.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/mtsintegrator.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/vec3.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/openmm.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/version.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/amd.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/baseunit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/constants.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_definitions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/mymatrix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_operators.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/quantity.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/basedimension.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/prefix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_math.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/standard_dimensions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.2+dfsg/.pybuild/cpython3_3.12/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/vec3.py to vec3.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/element.py to element.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/modeller.py to modeller.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:358: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:360: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:361: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:363: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:365: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:416: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:444: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:446: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:448: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:450: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/forcefield.py to forcefield.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulation.py to simulation.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/prefix.py to prefix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit.py to unit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/quantity.py to quantity.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/doctests.py to doctests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/openmm.py to openmm.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/openmm.py:19427: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__init__.py to __init__.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/amd.py to amd.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/testInstallation.py to testInstallation.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/__init__.py to __init__.cpython-312.pyc running install_egg_info running egg_info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.2+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/OpenMM-8.1.2.egg-info Skipping SOURCES.txt running install_scripts make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_python3 find debian/python3-openmm -name '*.py' \ | xargs sed -i 's/^#!\/bin\/env python/#!\/usr\/bin\/python3/' find debian/python3-openmm -name __pycache__ \ | xargs rm -rf find debian/python3-openmm -name '_openmm.*.so' \ | xargs chrpath --replace /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-313-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-313-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.2+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMRPMDOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-313-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-313-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-313-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.2+dfsg' dh_installdeb -O--buildsystem=cmake dh_numpy3 -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libopenmm-dev' in '../libopenmm-dev_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libopenmm-dev-dbgsym' in '../libopenmm-dev-dbgsym_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins' in '../libopenmm-plugins_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins-dbgsym' in '../libopenmm-plugins-dbgsym_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libopenmm8.1' in '../libopenmm8.1_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libopenmm8.1-dbgsym' in '../libopenmm8.1-dbgsym_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'python3-openmm' in '../python3-openmm_8.1.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'python3-openmm-dbgsym' in '../python3-openmm-dbgsym_8.1.2+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../openmm_8.1.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../openmm_8.1.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1317021/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1317021 and its subdirectories I: Current time: Fri Jan 23 12:54:49 +14 2026 I: pbuilder-time-stamp: 1769122489