I: pbuilder: network access will be disabled during build I: Current time: Tue Jan 27 18:50:56 +14 2026 I: pbuilder-time-stamp: 1769489456 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenics-dolfinx_0.9.0-5.dsc] I: copying [./fenics-dolfinx_0.9.0.orig.tar.gz] I: copying [./fenics-dolfinx_0.9.0-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./fenics-dolfinx_0.9.0-5.dsc: unsupported subcommand dpkg-source: info: extracting fenics-dolfinx in fenics-dolfinx-0.9.0 dpkg-source: info: unpacking fenics-dolfinx_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenics-dolfinx_0.9.0-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying python_cmake_module_path.patch dpkg-source: info: applying lib_rename.patch dpkg-source: info: applying python_unit_test_32bit.patch dpkg-source: info: applying docs_local_mathjax.patch dpkg-source: info: applying debian_version_id.patch dpkg-source: info: applying demo_no_vtk_adios2.patch dpkg-source: info: applying adios_config_mpi.patch dpkg-source: info: applying big_endian_skip_adios2_tests.patch dpkg-source: info: applying python_local_license.patch dpkg-source: info: applying pusimp.patch dpkg-source: info: applying drop_Werror.patch dpkg-source: info: applying demo_stokes_mumps_instead_of_superlu_dist.patch dpkg-source: info: applying test_adios2_skip.patch dpkg-source: info: applying unpin_cffi.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/518747/tmp/hooks/D01_modify_environment starting debug: Running on infom02-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 27 04:51 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/518747/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/518747/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=bf5911d96d5549dbb7287780b7d90bcd LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=518747 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HlG3CrFE/pbuilderrc_qzv9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HlG3CrFE/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-5.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/518747/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, gfortran, catch2 (>= 3~), chrpath, libbasix-dev (>= 0.9.0~), python3-basix, libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev, libhdf5-mpi-dev, libadios2-mpi-c++11-dev, libpugixml-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, libpetsc-real-dev, libpetsc-complex-dev, libslepc-real-dev, libslepc-complex-dev, python3-setuptools, pybuild-plugin-pyproject, python3-petsc4py, python3-petsc4py-real, python3-petsc4py-complex, python3-slepc4py, python3-slepc4py-real, python3-slepc4py-complex, pkgconf, python3-all-dev, python3-cffi, python3-ffcx (>= 1:0.9.0~), python3-ffcx (<< 1:0.10.0), python3-ufl (>= 2024.2.0~), python3-mpi4py, python3-nanobind (>= 2.0.0~), python3-numpy (>= 1:1.21~), python3-pip, python3-ply, python3-pytest, python3-pusimp (>= 0.1.1~), python3-requests, python3-scikit-build-core, python3-scipy, python3-sphinx, python3-virtualenv, libspdlog-dev, doxygen, graphviz, libjs-mathjax, libjs-modernizr, python3-jupytext, python3-matplotlib, python3-myst-parser, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19857 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on catch2 (>= 3~); however: Package catch2 is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on libbasix-dev (>= 0.9.0~); however: Package libbasix-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-basix; however: Package python3-basix is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-mpi-dev; however: Package libboost-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libadios2-mpi-c++11-dev; however: Package libadios2-mpi-c++11-dev is not installed. pbuilder-satisfydepends-dummy depends on libpugixml-dev; however: Package libpugixml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsuitesparse-dev; however: Package libsuitesparse-dev is not installed. pbuilder-satisfydepends-dummy depends on libscotch-dev; however: Package libscotch-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-real-dev; however: Package libpetsc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-complex-dev; however: Package libpetsc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-real-dev; however: Package libslepc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-complex-dev; however: Package libslepc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py; however: Package python3-petsc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-real; however: Package python3-petsc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-complex; however: Package python3-petsc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py; however: Package python3-slepc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-real; however: Package python3-slepc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-complex; however: Package python3-slepc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-cffi; however: Package python3-cffi is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (>= 1:0.9.0~); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (<< 1:0.10.0); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ufl (>= 2024.2.0~); however: Package python3-ufl is not installed. pbuilder-satisfydepends-dummy depends on python3-mpi4py; however: Package python3-mpi4py is not installed. pbuilder-satisfydepends-dummy depends on python3-nanobind (>= 2.0.0~); however: Package python3-nanobind is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.21~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-ply; however: Package python3-ply is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pusimp (>= 0.1.1~); however: Package python3-pusimp is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scikit-build-core; however: Package python3-scikit-build-core is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-virtualenv; however: Package python3-virtualenv is not installed. pbuilder-satisfydepends-dummy depends on libspdlog-dev; however: Package libspdlog-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on libjs-modernizr; however: Package libjs-modernizr is not installed. pbuilder-satisfydepends-dummy depends on python3-jupytext; however: Package python3-jupytext is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} catch2{a} chrpath{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} graphviz{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libabsl20230802{a} libadios2-common-c++11-dev{a} libadios2-common-core-dev{a} libadios2-mpi-auxiliary-2.10{a} libadios2-mpi-auxiliary-dev{a} libadios2-mpi-c++11-2.10{a} libadios2-mpi-c++11-dev{a} libadios2-mpi-c-2.10{a} libadios2-mpi-core-2.10{a} libadios2-mpi-core-dev{a} libadios2-mpi-plugins{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libavif16{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcairo2{a} libcamd3{a} libcatch2-dev{a} libcbor0.10{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp19{a} libclang1-19{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgcrypt20{a} libgd3{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-mpi-dev{a} libhdf5-openmpi-310{a} libhdf5-openmpi-cpp-310{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-310{a} libhdf5-openmpi-hl-310{a} libhdf5-openmpi-hl-cpp-310{a} libhdf5-openmpi-hl-fortran-310{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.32.0{a} libhypre-dev{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libidn2-dev{a} libimagequant0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-modernizr{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenjp2-7{a} libopenmpi-dev{a} libopenmpi40{a} libp11-kit-dev{a} libp11-kit0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpathplan4{a} libpciaccess0{a} libpetsc-complex-dev{a} libpetsc-complex3.22{a} libpetsc-complex3.22-dev{a} libpetsc-real-dev{a} libpetsc-real3.22{a} libpetsc-real3.22-dev{a} libpetsc3.22-dev-common{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libsharpyuv0{a} libslepc-complex-dev{a} libslepc-complex3.22{a} libslepc-complex3.22-dev{a} libslepc-real-dev{a} libslepc-real3.22{a} libslepc-real3.22-dev{a} libsm6{a} libsodium23{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsvtav1enc2{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack6{a} libunbound8{a} libunistring5{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libyaml-cpp0.8{a} libyaml-dev{a} libyuv0{a} libz3-4{a} libzmq5{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} nanobind-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python-petsc4py-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-basix{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-cffi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-distlib{a} python3-docutils{a} python3-fastjsonschema{a} python3-ffcx{a} python3-filelock{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-jupytext{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-myst-parser{a} python3-nanobind{a} python3-nbformat{a} python3-numpy{a} python3-packaging{a} python3-pathspec{a} python3-petsc4py{a} python3-petsc4py-complex{a} python3-petsc4py-complex3.22{a} python3-petsc4py-real{a} python3-petsc4py-real3.22{a} python3-pil{a} python3-pil.imagetk{a} python3-pip{a} python3-pip-whl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-ply{a} python3-pusimp{a} python3-pycparser{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-scikit-build-core{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-whl{a} python3-slepc4py{a} python3-slepc4py-complex{a} python3-slepc4py-complex3.22{a} python3-slepc4py-real{a} python3-slepc4py-real3.22{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tk{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufl{a} python3-ufolib2{a} python3-urllib3{a} python3-virtualenv{a} python3-wheel{a} python3-wheel-whl{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} robin-map-dev{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} swig{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} valgrind{a} valgrind-mpi{a} x11-common{a} x11proto-dev{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation gdb isympy-common javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libglib2.0-data libgpg-error-l10n libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libpetsc3.22-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-json-pointer python3-olefile python3-pooch python3-rfc3987 python3-uritemplate python3-webcolors shared-mime-info wget xauth xdg-user-dirs zsh 0 packages upgraded, 557 newly installed, 0 to remove and 0 not upgraded. Need to get 477 MB of archives. After unpacking 2173 MB will be used. Writing extended state information... 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1.47.2~rc1-2 [23.8 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 14 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.8-3 [1969 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.8-3 [677 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.8-1 [9788 B] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.8-1 [27.9 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-2 [858 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-2 [2198 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20241223 [164 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-3 [200 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-6 [1184 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-3 [723 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-3 [280 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b3 [54.6 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 72 http://deb.debian.org/debian unstable/main amd64 libcatch2-dev amd64 3.7.1-0.4 [613 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 catch2 all 3.7.1-0.4 [5052 B] Get: 74 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.18-1 [13.5 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.2-1 [2267 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.2-1 [11.9 MB] Get: 96 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2~rc1-2 [55.4 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.22 [90.5 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 103 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-3 [1600 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.22 [919 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.6.0-1 [720 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241217 [113 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.6-1 [26.0 MB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libclang-cpp19 amd64 1:19.1.6-1 [13.2 MB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.6-1 [7632 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b3 [5011 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-11 [836 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-11 [881 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-11 [11.7 MB] Get: 136 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-11 [13.2 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get: 138 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get: 139 http://deb.debian.org/debian unstable/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.11.0-1 [1879 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b2 [350 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-7+b3 [940 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1898.20241219-1 [173 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.3-1 [11.2 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [15.0 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.3-1 [489 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.4-1 [1501 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.1.0-1 [478 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [225 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [54.6 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [35.4 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libadios2-common-c++11-dev all 2.10.2+dfsg1-1 [25.7 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libadios2-common-core-dev amd64 2.10.2+dfsg1-1+b1 [124 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.5-1 [652 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 220 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.6-3 [2360 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 231 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-310 amd64 1.14.5+repack-1 [1395 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.14-2 [88.6 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-6+b2 [133 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b1 [221 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-plugins amd64 2.10.2+dfsg1-1+b1 [15.4 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-2.10 amd64 2.10.2+dfsg1-1+b1 [1730 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c-2.10 amd64 2.10.2+dfsg1-1+b1 [69.6 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-2.10 amd64 2.10.2+dfsg1-1+b1 [416 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-dev amd64 2.10.2+dfsg1-1+b1 [23.5 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-2.10 amd64 2.10.2+dfsg1-1+b1 [207 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-dev amd64 2.10.2+dfsg1-1+b1 [80.1 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-dev amd64 2.10.2+dfsg1-1+b1 [11.5 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [23.8 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.8.3+dfsg-2 [40.7 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-4 [104 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-4 [161 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-4 [4991 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-4 [120 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libbasix0.9 amd64 0.9.0-2+b1 [410 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libbasix-dev amd64 0.9.0-2+b1 [67.1 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-4 [10.6 MB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-4 [234 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-4 [235 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-4 [240 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-4 [245 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-4 [230 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-4 [333 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-4 [373 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-4 [239 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-4 [282 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-4 [230 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-4 [231 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-4 [298 kB] Get: 277 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 278 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-4 [330 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-4 [346 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-4 [261 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 283 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-4 [523 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-4 [571 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 286 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-4 [271 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.6-3 [97.0 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 301 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 302 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-3 [30.4 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.1.3-3 [617 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.16.0-1 [5696 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.16.0-1 [114 kB] Get: 308 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 311 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1.1 [120 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 316 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.2.3-4 [112 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-3 [468 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.5-1 [3961 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.6-3 [188 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.6-3 [1088 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.18 [3372 B] Get: 328 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-4 [290 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 330 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-4 [347 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-4 [375 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 333 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 334 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-4 [269 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-4 [276 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 337 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-4 [235 kB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-4 [236 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 340 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b6 [316 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libbtf2 amd64 1:7.8.3+dfsg-2 [24.7 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libc6-dbg amd64 2.40-4 [7117 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.8.3+dfsg-2 [37.5 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.8.3+dfsg-2 [39.2 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [32.5 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.8.3+dfsg-2 [638 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libcombblas2.0.0t64 amd64 2.0.0-6+b1 [265 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.5.19+dfsg-1 [303 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.11.1-1 [464 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.8.3+dfsg-2 [84.2 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2+b1 [347 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2+b1 [618 kB] Get: 372 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2+b1 [51.3 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2+b1 [2118 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi3 amd64 3.3.10-2+b1 [63.0 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi-dev amd64 3.3.10-2+b1 [67.8 kB] Get: 377 http://deb.debian.org/debian unstable/main amd64 libfmt-dev amd64 10.1.1+ds1-4 [177 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-310 amd64 1.14.5+repack-1 [113 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-310 amd64 1.14.5+repack-1 [69.1 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-310 amd64 1.14.5+repack-1 [43.7 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-310 amd64 1.14.5+repack-1 [133 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-310 amd64 1.14.5+repack-1 [24.1 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.14.5+repack-1 [3268 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.14.5+repack-1 [18.5 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-7+b2 [176 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libptscotch-7.0 amd64 7.0.6-1 [660 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist8 amd64 8.2.1+dfsg1-5+b1 [611 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libhypre-2.32.0 amd64 2.32.0-4 [1717 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.0+dfsg1-2 [21.9 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 libhypre-dev amd64 2.32.0-4 [1988 kB] Get: 396 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 libklu2 amd64 1:7.8.3+dfsg-2 [90.6 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 libldl3 amd64 1:7.8.3+dfsg-2 [24.5 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.18 [2576 B] Get: 403 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-7+b1 [1580 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libmumps-5.7 amd64 5.7.3-3+b1 [1967 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi-dev amd64 2.2.1-7+b1 [11.3 kB] Get: 407 http://deb.debian.org/debian unstable/main amd64 libscalapack-mpi-dev amd64 2.2.1-7+b1 [6420 B] Get: 408 http://deb.debian.org/debian unstable/main amd64 libmumps-dev amd64 5.7.3-3+b1 [1863 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libparpack2t64 amd64 3.9.1-4 [99.8 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libparpack2-dev amd64 3.9.1-4 [112 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.8.3+dfsg-2 [280 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libparu1 amd64 1:7.8.3+dfsg-2 [65.1 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.8.3+dfsg-2 [146 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.22 amd64 3.22.2+dfsg1-1+b1 [8028 kB] Get: 417 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-mongoose3 amd64 1:7.8.3+dfsg-2 [47.3 kB] Get: 418 http://deb.debian.org/debian unstable/main amd64 librbio4 amd64 1:7.8.3+dfsg-2 [39.9 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libspex3 amd64 1:7.8.3+dfsg-2 [59.9 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-dev amd64 1:7.8.3+dfsg-2 [1476 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libscotch-7.0 amd64 7.0.6-1 [413 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 libscotch-dev amd64 7.0.6-1 [1584 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 libptscotch-dev amd64 7.0.6-1 [1394 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.10.24-2 [46.8 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2024.10.24-2 [50.7 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b2 [8672 B] Get: 427 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist-dev amd64 8.2.1+dfsg1-5+b1 [904 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 libyaml-dev amd64 0.2.5-2 [63.4 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 libpetsc3.22-dev-common all 3.22.2+dfsg1-1 [311 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 valgrind amd64 1:3.20.0-2.1 [14.3 MB] Get: 438 http://deb.debian.org/debian unstable/main amd64 valgrind-mpi amd64 1:3.20.0-2.1 [123 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.22-dev amd64 3.22.2+dfsg1-1+b1 [7923 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex-dev all 3.22.2+dfsg1-1 [12.8 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.22 amd64 3.22.2+dfsg1-1+b1 [7850 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.22-dev amd64 3.22.2+dfsg1-1+b1 [7948 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 libpetsc-real-dev all 3.22.2+dfsg1-1 [12.8 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 libpugixml-dev amd64 1.14-2 [109 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.8-3 [2154 kB] Get: 446 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.8-3 [5134 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.8-1 [10.1 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [1975 kB] Get: 449 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.1-2 [2151 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.1-2 [5009 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.8-1 [1068 B] Get: 452 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.22 amd64 3.22.2+dfsg1-1 [1425 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.22-dev amd64 3.22.2+dfsg1-1 [6419 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 libslepc-complex-dev amd64 3.22.2+dfsg1-1 [15.9 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.22 amd64 3.22.2+dfsg1-1 [1386 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.22-dev amd64 3.22.2+dfsg1-1 [6394 kB] Get: 458 http://deb.debian.org/debian unstable/main amd64 libslepc-real-dev amd64 3.22.2+dfsg1-1 [15.9 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 libspdlog1.12 amd64 1:1.12.0+ds-2+b3 [104 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 libspdlog-dev amd64 1:1.12.0+ds-2+b3 [85.5 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [795 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 robin-map-dev all 1.3.0-1 [29.8 kB] Get: 466 http://deb.debian.org/debian unstable/main amd64 nanobind-dev all 2.4.0-1 [161 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.45.1-1 [56.7 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241217 [11.5 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python-petsc4py-doc all 3.22.1-2 [778 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-2 [740 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.8-1 [1048 B] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.8-3 [505 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.8-1 [26.1 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.1-2 [504 kB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.8-1 [1068 B] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 python3-ufl all 2024.2.0-2 [150 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 python3-basix amd64 0.9.0-2+b1 [134 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b6 [321 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.17.1-2+b1 [96.2 kB] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-ply all 3.11-7 [62.6 kB] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-pycparser all 2.22-2 [78.0 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-cffi all 1.17.1-2 [89.4 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.1-1 [264 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 python3-distlib all 0.3.9-1 [257 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 496 http://deb.debian.org/debian unstable/main amd64 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 python3-filelock all 3.16.1-1 [12.6 kB] Get: 498 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.2-1 [31.0 kB] Get: 499 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 500 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-5.1 [95.2 kB] Get: 501 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB] Get: 502 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.4.0+dfsg-1 [25.5 kB] Get: 503 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-3 [20.5 MB] Get: 504 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 505 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 506 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get: 507 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 508 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.55.0-3 [1634 kB] Get: 509 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 510 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.21.0-2 [287 kB] Get: 511 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.35.1-2 [23.5 kB] Get: 512 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 513 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 514 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 515 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.7.2-5 [35.3 kB] Get: 516 http://deb.debian.org/debian unstable/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get: 517 http://deb.debian.org/debian unstable/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 518 http://deb.debian.org/debian unstable/main amd64 python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 519 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 520 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1+b1 [178 kB] Get: 521 http://deb.debian.org/debian unstable/main amd64 python3-jupytext all 1.16.4+ds1-1 [91.8 kB] Get: 522 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2+b1 [77.0 kB] Get: 523 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1+b1 [522 kB] Get: 524 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.8-3 [113 kB] Get: 525 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.1-2 [103 kB] Get: 526 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.13.1-1 [9464 B] Get: 527 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1+b1 [79.8 kB] Get: 528 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 529 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3+b1 [5654 kB] Get: 530 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.1-6+b1 [1000 kB] Get: 531 http://deb.debian.org/debian unstable/main amd64 python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 532 http://deb.debian.org/debian unstable/main amd64 python3-nanobind all 2.4.0-1 [40.3 kB] Get: 533 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 534 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.3.0-0.1 [1502 kB] Get: 535 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real3.22 amd64 3.22.1-2 [1994 kB] Get: 536 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real all 3.22.1-2 [10.7 kB] Get: 537 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex3.22 amd64 3.22.1-2 [1998 kB] Get: 538 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex all 3.22.1-2 [10.7 kB] Get: 539 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py all 3.22.1-2 [10.9 kB] Get: 540 http://deb.debian.org/debian unstable/main amd64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 541 http://deb.debian.org/debian unstable/main amd64 python3-pip-whl all 24.3.1+dfsg-1 [1501 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 python3-pusimp all 0.1.1-1 [10.1 kB] Get: 544 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-metadata all 0.9.0-1 [20.8 kB] Get: 545 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.4-1 [250 kB] Get: 546 http://deb.debian.org/debian unstable/main amd64 python3-scikit-build-core all 0.10.7-2 [123 kB] Get: 547 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-whl all 75.6.0-1 [1239 kB] Get: 548 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real3.22 amd64 3.22.1-2 [492 kB] Get: 549 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real all 3.22.1-2 [6616 B] Get: 550 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex3.22 amd64 3.22.1-2 [490 kB] Get: 551 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex all 3.22.1-2 [6688 B] Get: 552 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py all 3.22.1-2 [6808 B] Get: 553 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-1 [1023 kB] Get: 554 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 555 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-1 [29.5 kB] Get: 556 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.45.1-1 [75.3 kB] Get: 557 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.28.0+ds-1 [71.3 kB] Fetched 477 MB in 8s (63.3 MB/s) Preconfiguring packages ... Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19857 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../libpython3.12-minimal_3.12.8-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-3_amd64.deb ... Unpacking python3.12-minimal (3.12.8-3) ... Setting up libpython3.12-minimal:amd64 (3.12.8-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20203 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.8-1_amd64.deb ... Unpacking python3-minimal (3.12.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../04-libffi8_3.4.6-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.6-1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../05-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../06-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../07-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../08-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../09-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../10-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../11-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../12-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../13-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../14-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../15-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../16-libpython3.12-stdlib_3.12.8-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../17-python3.12_3.12.8-3_amd64.deb ... Unpacking python3.12 (3.12.8-3) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libccolamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libbasix0.9:amd64 (0.9.0-2+b1) ... Setting up groff-base (1.23.0-6) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.1.0-1) ... Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up gfortran-14 (14.2.0-11) ... Setting up libsuperlu-dev:amd64 (7.0.0+dfsg1-2) ... Setting up libbasix-dev:amd64 (0.9.0-2+b1) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libpython3.13-stdlib:amd64 (3.13.1-2) ... Setting up libfftw3-dev:amd64 (3.3.10-2+b1) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libclang-cpp19 (1:19.1.6-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libpython3.13:amd64 (3.13.1-2) ... Setting up libgnutls30t64:amd64 (3.8.8-2) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-4) ... Setting up libgnutls-openssl27t64:amd64 (3.8.8-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libcholmod5:amd64 (1:7.8.3+dfsg-2) ... Setting up libxft2:amd64 (2.3.6-1+b3) ... Setting up libarpack2-dev:amd64 (3.9.1-4) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up libspqr4:amd64 (1:7.8.3+dfsg-2) ... Setting up python3.13 (3.13.1-2) ... Setting up python3-pip-whl (24.3.1+dfsg-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-4) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up nanobind-dev (2.4.0-1) ... Setting up libpango-1.0-0:amd64 (1.55.0+ds-3) ... Setting up python3.12-tk (3.12.8-3) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up libspdlog-dev:amd64 (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.1-2) ... Setting up libldap-2.5-0:amd64 (2.5.19+dfsg-1) ... Setting up libpsl-dev:amd64 (0.21.2-1.1+b1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libgnutls-dane0t64:amd64 (3.8.8-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libklu2:amd64 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:amd64 (1.21.3-3) ... Setting up libldap-dev:amd64 (2.5.19+dfsg-1) ... Setting up libraqm0:amd64 (0.10.2-1) ... Setting up libpython3.13-dev:amd64 (3.13.1-2) ... Setting up sphinx-common (8.1.3-3) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:amd64 (5.0.5-1) ... Setting up libumfpack6:amd64 (1:7.8.3+dfsg-2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-3) ... Setting up libgnutls28-dev:amd64 (3.8.8-2) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.8-3) ... Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up python3.13-dev (3.13.1-2) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.8-3) ... Setting up debhelper (13.22) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up python-petsc4py-doc (3.22.1-2) ... Setting up libibverbs-dev:amd64 (52.0-2+b1) ... Setting up libparu1:amd64 (1:7.8.3+dfsg-2) ... Setting up libpython3.12t64:amd64 (3.12.8-3) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... Setting up cmake (3.31.2-1) ... Setting up libpython3-stdlib:amd64 (3.12.8-1) ... Setting up krb5-multidev:amd64 (1.21.3-3) ... Setting up libsuitesparse-dev:amd64 (1:7.8.3+dfsg-2) ... Setting up python3 (3.12.8-1) ... /usr/share/petsc/3.22/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.22/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:amd64 (3.12.8-3) ... Setting up python3-distlib (0.3.9-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up python3-wheel (0.45.1-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.2-1) ... Setting up libkrb5-dev:amd64 (1.21.3-3) ... Setting up python3-pil:amd64 (10.4.0-1+b1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1.1) ... Setting up python3-packaging (24.2-1) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up libcurl4-openssl-dev:amd64 (8.11.1-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.8-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.2.3-4) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.21.0-2) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:amd64 (5.3.0-1+b1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-pusimp (0.1.1-1) ... Setting up python3-jupyter-core (5.7.2-5) ... Setting up python3-cffi-backend:amd64 (1.17.1-2+b1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (24.2.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up python3-nanobind (2.4.0-1) ... Setting up python3-filelock (3.16.1-1) ... Setting up libpython3-dev:amd64 (3.12.8-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-pyproject-metadata (0.9.0-1) ... Setting up python3-lz4 (4.4.0+dfsg-1) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.4-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-virtualenv (20.28.0+ds-1) ... Setting up python3-all (3.12.8-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:amd64 (3.13.1-1) ... Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1+b1) ... Setting up libpython3-all-dev:amd64 (3.12.8-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.8-1) ... Setting up python3-referencing (0.35.1-2) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up python3-all-dev (3.12.8-1) ... Setting up libopenmpi40:amd64 (5.0.6-3) ... Setting up libptscotch-7.0:amd64 (7.0.6-1) ... Setting up python3-setuptools (75.6.0-1) ... Setting up python3-scikit-build-core (0.10.7-2) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-cffi (1.17.1-2) ... Setting up libcombblas2.0.0t64:amd64 (2.0.0-6+b1) ... Setting up libfftw3-mpi3:amd64 (3.3.10-2+b1) ... Setting up libhdf5-openmpi-310:amd64 (1.14.5+repack-1) ... Setting up python3-fs (2.4.16-5.1) ... Setting up libhdf5-openmpi-fortran-310:amd64 (1.14.5+repack-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up libparpack2t64:amd64 (3.9.1-4) ... Setting up python3-contourpy (1.3.1-1) ... Setting up libboost-mpi1.83.0 (1.83.0-4) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up openmpi-bin (5.0.6-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up dh-python (6.20241217) ... Setting up libhdf5-openmpi-hl-310:amd64 (1.14.5+repack-1) ... Setting up python3-scipy (1.14.1-3) ... Setting up libhdf5-openmpi-hl-fortran-310:amd64 (1.14.5+repack-1) ... Setting up python3-ufl (2024.2.0-2) ... Setting up libhdf5-openmpi-hl-cpp-310:amd64 (1.14.5+repack-1) ... Setting up libsuperlu-dist8:amd64 (8.2.1+dfsg1-5+b1) ... Setting up pybuild-plugin-pyproject (6.20241217) ... Setting up libhdf5-openmpi-cpp-310:amd64 (1.14.5+repack-1) ... Setting up libfftw3-mpi-dev:amd64 (3.3.10-2+b1) ... Setting up mpi-default-bin (1.18) ... Setting up libhypre-2.32.0:amd64 (2.32.0-4) ... Setting up python3-mpi4py (4.0.1-6+b1) ... Setting up libsuperlu-dist-dev:amd64 (8.2.1+dfsg1-5+b1) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-basix (0.9.0-2+b1) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-7+b1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libmumps-5.7:amd64 (5.7.3-3+b1) ... Setting up python3-jupytext (1.16.4+ds1-1) ... Setting up libscalapack-openmpi-dev:amd64 (2.2.1-7+b1) ... Setting up libpetsc-complex3.22:amd64 (3.22.2+dfsg1-1+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.22 (libpetsc.so.3.22) in auto mode Setting up python3-petsc4py-complex3.22 (3.22.1-2) ... Setting up python3-petsc4py (3.22.1-2) ... Setting up libpetsc-real3.22:amd64 (3.22.2+dfsg1-1+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.22 (libpetsc.so.3.22) in auto mode Setting up python3-petsc4py-real3.22 (3.22.1-2) ... Setting up libslepc-complex3.22 (3.22.2+dfsg1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.22 (libslepc.so.3.22) in auto mode Setting up python3-petsc4py-complex (3.22.1-2) ... Setting up libslepc-real3.22 (3.22.2+dfsg1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.22 (libslepc.so.3.22) in auto mode Setting up python3-slepc4py-complex3.22 (3.22.1-2) ... Setting up python3-petsc4py-real (3.22.1-2) ... Setting up python3-slepc4py-complex (3.22.1-2) ... Setting up python3-slepc4py-real3.22 (3.22.1-2) ... Setting up python3-slepc4py (3.22.1-2) ... Setting up python3-slepc4py-real (3.22.1-2) ... Setting up python3-fonttools (4.55.0-3) ... Setting up libadios2-mpi-plugins:amd64 (2.10.2+dfsg1-1+b1) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.3-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up libadios2-mpi-core-2.10:amd64 (2.10.2+dfsg1-1+b1) ... Setting up libheif1:amd64 (1.19.3-1) ... Setting up libadios2-mpi-c++11-2.10:amd64 (2.10.2+dfsg1-1+b1) ... Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up libadios2-mpi-c-2.10:amd64 (2.10.2+dfsg1-1+b1) ... Setting up libadios2-mpi-auxiliary-2.10:amd64 (2.10.2+dfsg1-1+b1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... Setting up libadios2-mpi-auxiliary-dev:amd64 (2.10.2+dfsg1-1+b1) ... Setting up libadios2-mpi-core-dev:amd64 (2.10.2+dfsg1-1+b1) ... Setting up libadios2-mpi-c++11-dev:amd64 (2.10.2+dfsg1-1+b1) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-3) ... Setting up python3-myst-parser (4.0.0-1) ... Setting up libpmix-dev:amd64 (5.0.5-1) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up libopenmpi-dev:amd64 (5.0.6-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.14.5+repack-1) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-1) ... Setting up mpi-default-dev (1.18) ... Setting up libscalapack-mpi-dev:amd64 (2.2.1-7+b1) ... Setting up libmumps-dev:amd64 (5.7.3-3+b1) ... Setting up libscotch-dev (7.0.6-1) ... Setting up libparpack2-dev:amd64 (3.9.1-4) ... Setting up libhypre-dev:amd64 (2.32.0-4) ... Setting up libptscotch-dev (7.0.6-1) ... Setting up libboost-mpi1.83-dev (1.83.0-4) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpi-dev:amd64 (1.14.5+repack-1) ... Setting up libpetsc3.22-dev-common (3.22.2+dfsg1-1) ... Setting up libpetsc-real3.22-dev:amd64 (3.22.2+dfsg1-1+b1) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.22 (petsc3.22) in auto mode Setting up libpetsc-complex3.22-dev:amd64 (3.22.2+dfsg1-1+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libpetsc_complex.so (libpetsc_complex.so) in auto mode Setting up libslepc-complex3.22-dev (3.22.2+dfsg1-1) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_complex.so (libslepc_complex.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex to provide /usr/lib/slepcdir/3.22 (slepc3.22) in auto mode Setting up libpetsc-real-dev (3.22.2+dfsg1-1) ... Setting up libpetsc-complex-dev (3.22.2+dfsg1-1) ... Setting up libslepc-real3.22-dev (3.22.2+dfsg1-1) ... update-alternatives: using /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.22.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.22 (slepc3.22) in auto mode Setting up libslepc-real-dev (3.22.2+dfsg1-1) ... Setting up libslepc-complex-dev (3.22.2+dfsg1-1) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/518747/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/518747/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-5_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake --with python3,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex rm -rf python/build-real python/build-complex rm -rf debian/tmp-real debian/tmp-complex rm -rf python/fenics_dolfinx.egg-info rm -rf python/doc/build python/doc/source/generated rm -rf cpp/doc/latex cpp/doc/html cpp/doc/xml rm -rf /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake --with python3,sphinxdoc dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-5 cd obj-x86_64-linux-gnu-real && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-5 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.8") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Found PETSc version 3.22.2, prefix: /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.22.2, prefix: /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.6) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (5.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-5 cd obj-x86_64-linux-gnu-complex && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-5 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.8") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Found PETSc version 3.22.2, prefix: /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.22.2, prefix: /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.6) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (5.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real cd obj-x86_64-linux-gnu-real && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-5\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp [ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time 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CMakeFiles/dolfinx.dir/fem/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp [ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include 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Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp [ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem 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dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o -MF CMakeFiles/dolfinx.dir/la/slepc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/slepc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem 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Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp [100%] Linking CXX shared library libdolfinx_real.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -g -DNDEBUG -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/dolfinx.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libdolfinx_real.so.0.9 -o libdolfinx_real.so.0.9.0 CMakeFiles/dolfinx.dir/common/defines.cpp.o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o CMakeFiles/dolfinx.dir/common/log.cpp.o CMakeFiles/dolfinx.dir/common/MPI.cpp.o CMakeFiles/dolfinx.dir/common/Table.cpp.o CMakeFiles/dolfinx.dir/common/Timer.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o CMakeFiles/dolfinx.dir/common/timing.cpp.o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o CMakeFiles/dolfinx.dir/fem/utils.cpp.o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_real.so.0.9.0 libdolfinx_real.so.0.9 libdolfinx_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex cd obj-x86_64-linux-gnu-complex && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o [ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-5\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time 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/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -MF CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp [ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp [ 46%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include 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/usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp [ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp [ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp [ 60%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem 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/usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp [100%] Linking CXX shared library libdolfinx_complex.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -g -DNDEBUG -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/dolfinx.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libdolfinx_complex.so.0.9 -o libdolfinx_complex.so.0.9.0 CMakeFiles/dolfinx.dir/common/defines.cpp.o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o CMakeFiles/dolfinx.dir/common/log.cpp.o CMakeFiles/dolfinx.dir/common/MPI.cpp.o CMakeFiles/dolfinx.dir/common/Table.cpp.o CMakeFiles/dolfinx.dir/common/Timer.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o CMakeFiles/dolfinx.dir/common/timing.cpp.o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o 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CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_complex.so.0.9.0 libdolfinx_complex.so.0.9 libdolfinx_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "Tests must be run after installation" Tests must be run after installation make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --destdir=debian/tmp-real cd obj-x86_64-linux-gnu-real && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory 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/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cp COPYING.LESSER python for build in real; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ ADIOS2_ALWAYS_USE_MPI=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.2 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmpnea0y7vg/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.13 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (3.5s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmpnea0y7vg/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmpnea0y7vg/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmpnea0y7vg/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpnea0y7vg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmpnea0y7vg/build/CMakeFiles /tmp/tmpnea0y7vg/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmpnea0y7vg/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmpnea0y7vg/build' cd /tmp/tmpnea0y7vg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpnea0y7vg/build /tmp/tmpnea0y7vg/build /tmp/tmpnea0y7vg/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmpnea0y7vg/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmpnea0y7vg/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -c /usr/share/nanobind/src/nb_enum.cpp [ 20%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -c /usr/share/nanobind/src/nb_ndarray.cpp [ 25%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -c /usr/share/nanobind/src/nb_static_property.cpp [ 29%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o.d 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[100%] =============================== warnings summary =============================== test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-real/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-real/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 14.65s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.75s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 9.55s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 5.67s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.90s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 4.72s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 4.55s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh0] 4.39s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 4.02s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 3.90s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.64s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 3.36s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] 3.35s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] 3.32s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 3.31s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 3.17s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 3.17s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] 3.16s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] 3.16s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 3.01s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1099.54s (0:18:19) = I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.2 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmpl58zexvb/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.8") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (3.1s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmpl58zexvb/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmpl58zexvb/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmpl58zexvb/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpl58zexvb/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmpl58zexvb/build/CMakeFiles /tmp/tmpl58zexvb/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmpl58zexvb/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmpl58zexvb/build' cd /tmp/tmpl58zexvb/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpl58zexvb/build /tmp/tmpl58zexvb/build /tmp/tmpl58zexvb/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmpl58zexvb/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmpl58zexvb/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong 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-fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -c /usr/share/nanobind/src/nb_ndarray.cpp [ 25%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -c /usr/share/nanobind/src/nb_static_property.cpp [ 29%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -c /usr/share/nanobind/src/common.cpp [ 33%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -c /usr/share/nanobind/src/error.cpp [ 37%] Building CXX object 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-I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -c /usr/share/nanobind/src/implicit.cpp [ 45%] Linking CXX static library libnanobind-static.a /usr/bin/cmake -P CMakeFiles/nanobind-static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" 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/usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/refinement.cpp [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-312-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so gmake[4]: Leaving directory '/tmp/tmpl58zexvb/build' [100%] Built target cpp gmake[3]: Leaving directory '/tmp/tmpl58zexvb/build' /usr/bin/cmake -E cmake_progress_start /tmp/tmpl58zexvb/build/CMakeFiles 0 gmake[2]: Leaving directory '/tmp/tmpl58zexvb/build' *** Installing project into wheel... -- Install configuration: "Release" -- Installing: /tmp/tmpl58zexvb/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/tmp/tmpl58zexvb/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild base:311: cd /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build; python3.12 -m pytest --durations=20 -k "" ============================= test session starts ============================== platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0 rootdir: /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2643 items / 2 skipped test/debian-only/test_pusimp.py .sss.. [ 0%] test/unit/common/test_index_map.py ....s [ 0%] test/unit/common/test_mpi.py .. [ 0%] test/unit/common/test_public_api.py s [ 0%] test/unit/common/test_timer.py .. [ 0%] test/unit/common/test_version.py . [ 0%] test/unit/fem/test_assemble_domains.py ........... [ 1%] test/unit/fem/test_assemble_mesh_independent_form.py ........ [ 1%] test/unit/fem/test_assemble_submesh.py ................................. [ 2%] .............................................x.. [ 4%] test/unit/fem/test_assembler.py ........................................ [ 5%] .................... [ 6%] test/unit/fem/test_bcs.py .................... [ 7%] test/unit/fem/test_complex_assembler.py .... [ 7%] test/unit/fem/test_constant.py ....... [ 7%] test/unit/fem/test_custom_basix_element.py ............................. [ 8%] .............................xx..xx.. [ 10%] test/unit/fem/test_discrete_operators.py ............................... [ 11%] ........................................................................ [ 14%] ............................................. [ 15%] test/unit/fem/test_dof_coordinates.py ................ [ 16%] test/unit/fem/test_dof_permuting.py .................................... [ 17%] ........................................................................ [ 20%] ..................................ssssss [ 22%] test/unit/fem/test_dofmap.py ss.ss.ssss......... [ 22%] test/unit/fem/test_element_integrals.py ................................ [ 24%] ........................................................................ [ 26%] ........................................................................ [ 29%] ........................................................................ [ 32%] ................................ssssssssssssssss........................ [ 34%] [ 34%] test/unit/fem/test_expression.py ............................. 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[ 55%] test/unit/fem/test_petsc_nonlinear_assembler.py ...... [ 56%] test/unit/fem/test_petsc_solver_wrappers.py .. [ 56%] test/unit/fem/test_quadrature_elements.py .............................. [ 57%] ...... [ 57%] test/unit/fem/test_special_functions.py ... [ 57%] test/unit/fem/test_symmetric_tensor.py ........ [ 57%] test/unit/fem/test_symmetry.py ......................................... [ 59%] ....................................................... [ 61%] test/unit/fem/test_vector_assemble.py .. [ 61%] test/unit/fem/test_vector_function.py .......... [ 62%] test/unit/geometry/test_bounding_box_tree.py ........................... [ 63%] ................................. [ 64%] test/unit/geometry/test_gjk.py ......................................... [ 65%] ...................... [ 66%] test/unit/graph/test_adjacencylist.py .. [ 66%] test/unit/io/test_adios2.py ............................................ [ 68%] .....ssssssss [ 68%] test/unit/io/test_vtk.py ....................... [ 69%] test/unit/io/test_xdmf_function.py ..................................... [ 71%] ...........................................s [ 72%] test/unit/io/test_xdmf_mesh.py ..........ss............................. [ 74%] ................................... [ 75%] test/unit/io/test_xdmf_meshdata.py .. [ 75%] test/unit/io/test_xdmf_meshtags.py .... [ 75%] test/unit/la/test_matrix_csr.py ............................ [ 77%] test/unit/la/test_matrix_vector.py ............xxx....xxx....xxxxxxxxxx [ 78%] test/unit/la/test_nullspace.py ................................ [ 79%] test/unit/la/test_sparsity_pattern.py . [ 79%] test/unit/la/test_vector_scatter.py ........... [ 80%] test/unit/mesh/test_cell.py ... [ 80%] test/unit/mesh/test_create_mixed_mesh.py . [ 80%] test/unit/mesh/test_dual_graph.py . [ 80%] test/unit/mesh/test_face.py s. [ 80%] test/unit/mesh/test_ghost_mesh.py X..X...X [ 80%] test/unit/mesh/test_higher_order_mesh.py ............................... [ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 14.03s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.69s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.60s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 5.30s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 5.27s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 4.76s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 4.54s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.29s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 3.98s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] 3.95s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-3-4] 3.87s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Discontinuous Lagrange-1-4] 3.86s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 3.79s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 3.68s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Lagrange-3-4] 3.64s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] 3.60s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] 3.55s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Lagrange-1-4] 3.46s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.34s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_block_nl 3.28s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1112.93s (0:18:32) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cp COPYING.LESSER python dh_numpy3 -a for build in complex; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.2 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmpqwsgvzo2/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.13 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (3.6s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmpqwsgvzo2/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmpqwsgvzo2/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmpqwsgvzo2/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpqwsgvzo2/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmpqwsgvzo2/build/CMakeFiles /tmp/tmpqwsgvzo2/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmpqwsgvzo2/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmpqwsgvzo2/build' cd /tmp/tmpqwsgvzo2/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpqwsgvzo2/build /tmp/tmpqwsgvzo2/build /tmp/tmpqwsgvzo2/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmpqwsgvzo2/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmpqwsgvzo2/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g 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[100%] =============================== warnings summary =============================== test/unit/fem/test_discrete_operators.py: 72 warnings /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-complex/build/test/unit/fem/test_discrete_operators.py:253: ComplexWarning: Casting complex values to real discards the imaginary part ux[: len(u.x.array)] = u.x.array[:] test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-complex/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.13_dolfinx-complex/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 15.07s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.88s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.58s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 5.23s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 5.04s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.66s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 4.43s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 4.36s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 3.83s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 3.65s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] 3.49s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 3.48s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 3.44s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] 3.36s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 3.33s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] 3.31s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.23s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] 3.10s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] 3.07s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] 3.04s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 1133.99s (0:18:53) = I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.2 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmphajhrbfk/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.8") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (4.4s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmphajhrbfk/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmphajhrbfk/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmphajhrbfk/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmphajhrbfk/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmphajhrbfk/build/CMakeFiles /tmp/tmphajhrbfk/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmphajhrbfk/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmphajhrbfk/build' cd /tmp/tmphajhrbfk/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmphajhrbfk/build /tmp/tmphajhrbfk/build /tmp/tmphajhrbfk/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" 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CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so gmake[4]: Leaving directory '/tmp/tmphajhrbfk/build' [100%] Built target cpp gmake[3]: Leaving directory '/tmp/tmphajhrbfk/build' /usr/bin/cmake -E cmake_progress_start /tmp/tmphajhrbfk/build/CMakeFiles 0 gmake[2]: Leaving directory '/tmp/tmphajhrbfk/build' *** Installing project into wheel... -- Install configuration: "Release" -- Installing: /tmp/tmphajhrbfk/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/tmp/tmphajhrbfk/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild base:311: cd /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build; python3.12 -m pytest --durations=20 -k "" ============================= test session starts ============================== platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0 rootdir: /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2643 items / 2 skipped test/debian-only/test_pusimp.py .sss.. 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[100%] =============================== warnings summary =============================== test/unit/fem/test_discrete_operators.py: 72 warnings /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/test/unit/fem/test_discrete_operators.py:253: ComplexWarning: Casting complex values to real discards the imaginary part ux[: len(u.x.array)] = u.x.array[:] test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:127: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 16.37s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.66s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.58s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 6.00s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 4.69s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.47s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 4.44s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 4.42s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] 4.22s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 4.17s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 4.14s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 4.08s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 3.99s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 3.84s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.81s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] 3.64s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] 3.63s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 3.33s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] 3.28s call test/unit/fem/test_element_integrals.py::test_facet_integral[complex64-CellType.hexahedron] 3.26s call test/unit/fem/test_element_integrals.py::test_facet_integral[float32-CellType.hexahedron] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 1130.65s (0:18:50) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc if [ "x" != "xno" ]; then \ case " mips64el hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL tests have been disabled on amd64";; \ *) set -e; \ export CTEST_OUTPUT_ON_FAILURE=1; \ for build in real complex; do \ echo "== testing $build number build =="; \ builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-${build}; \ for mytest in test demo; do \ echo "running tests from $mytest for $build build"; \ testdir=${builddir}/run_${mytest}; \ mkdir -p $testdir; \ cd $testdir; \ if [ "x" != "x" ]; then echo "set(CTEST_CUSTOM_TESTS_IGNORE )" >> CTestCustom.cmake; fi; \ PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-${build} cmake -DCMAKE_MODULE_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DDOLFINX_DIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DMPIEXEC_PARAMS:STRING="--oversubscribe" \ /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/${mytest}; \ make all VERBOSE=1; \ OMPI_ALLOW_RUN_AS_ROOT=1 OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 make test VERBOSE=1; \ done; \ cd /build/reproducible-path/fenics-dolfinx-0.9.0; \ done; \ esac; \ fi == testing real number build == running tests from test for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/main.cpp.o -MF CMakeFiles/unittests.dir/main.cpp.o.d -o CMakeFiles/unittests.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/main.cpp [ 17%] Building CXX object CMakeFiles/unittests.dir/vector.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/vector.cpp.o -MF CMakeFiles/unittests.dir/vector.cpp.o.d -o CMakeFiles/unittests.dir/vector.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/vector.cpp [ 23%] Building CXX object CMakeFiles/unittests.dir/matrix.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/matrix.cpp.o -MF CMakeFiles/unittests.dir/matrix.cpp.o.d -o CMakeFiles/unittests.dir/matrix.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/matrix.cpp [ 29%] Building CXX object CMakeFiles/unittests.dir/io.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/io.cpp.o -MF CMakeFiles/unittests.dir/io.cpp.o.d -o CMakeFiles/unittests.dir/io.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/io.cpp [ 35%] Building CXX object CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -MF CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o.d -o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sub_systems_manager.cpp [ 41%] Building CXX object CMakeFiles/unittests.dir/common/index_map.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/index_map.cpp.o -MF CMakeFiles/unittests.dir/common/index_map.cpp.o.d -o CMakeFiles/unittests.dir/common/index_map.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/index_map.cpp [ 47%] Building CXX object CMakeFiles/unittests.dir/common/sort.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sort.cpp.o -MF CMakeFiles/unittests.dir/common/sort.cpp.o.d -o CMakeFiles/unittests.dir/common/sort.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sort.cpp [ 52%] Building CXX object CMakeFiles/unittests.dir/fem/functionspace.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/fem/functionspace.cpp.o -MF CMakeFiles/unittests.dir/fem/functionspace.cpp.o.d -o CMakeFiles/unittests.dir/fem/functionspace.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/fem/functionspace.cpp [ 58%] Building CXX object CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -MF CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o.d -o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/distributed_mesh.cpp [ 64%] Building CXX object CMakeFiles/unittests.dir/mesh/generation.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem 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-DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o -MF 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-isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/option.cpp [ 88%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem 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CMakeFiles/unittests.dir/poisson.c.o /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat 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CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.64 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.64 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done (3.1s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 7%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 11%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/biharmonic.c [ 15%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_biharmonic.dir/link.d CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 15%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 19%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 23%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -MF CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o.d -o CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp [ 26%] Building C object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/mixed_codim0.c [ 30%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_codim_0_assembly.dir/link.d CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 30%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 34%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 38%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_custom_kernel.dir/link.d CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 38%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 42%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 46%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 50%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/poisson.c [ 53%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_poisson.dir/link.d CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 53%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 57%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 61%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 65%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/poisson.c [ 69%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_poisson_matrix_free.dir/link.d CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 69%] Built target demo_poisson_matrix_free make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 73%] Compile hyperelasticity.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 76%] Building CXX object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -MF CMakeFiles/demo_hyperelasticity.dir/main.cpp.o.d -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp [ 80%] Building C object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -MF CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o.d -o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/hyperelasticity.c [ 84%] Linking CXX executable demo_hyperelasticity cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_hyperelasticity.dir/link.d CMakeFiles/demo_hyperelasticity.dir/main.cpp.o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -o demo_hyperelasticity -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 84%] Built target demo_hyperelasticity make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 88%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 92%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_interpolation-io.dir/link.d "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 92%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 96%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_interpolation_different_meshes.dir/link.d CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.48 sec Start 2: demo_biharmonic_mpi_3 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.48 sec Start 3: demo_biharmonic_serial 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.46 sec Start 4: demo_codim_0_assembly_mpi_2 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.43 sec Start 5: demo_codim_0_assembly_mpi_3 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec Start 6: demo_codim_0_assembly_serial 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec Start 7: demo_custom_kernel_mpi_2 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 1.06 sec Start 8: demo_custom_kernel_mpi_3 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.92 sec Start 9: demo_custom_kernel_serial 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.98 sec Start 10: demo_poisson_mpi_2 10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.43 sec Start 11: demo_poisson_mpi_3 11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.44 sec Start 12: demo_poisson_serial 12/24 Test #12: demo_poisson_serial .......................... Passed 0.34 sec Start 13: demo_poisson_matrix_free_mpi_2 13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.43 sec Start 14: demo_poisson_matrix_free_mpi_3 14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.43 sec Start 15: demo_poisson_matrix_free_serial 15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.33 sec Start 16: demo_hyperelasticity_mpi_2 16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.48 sec Start 17: demo_hyperelasticity_mpi_3 17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.70 sec Start 18: demo_hyperelasticity_serial 18/24 Test #18: demo_hyperelasticity_serial .................. Passed 0.97 sec Start 19: demo_interpolation-io_mpi_2 19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.44 sec Start 20: demo_interpolation-io_mpi_3 20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.44 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.33 sec Start 22: demo_interpolation_different_meshes_mpi_2 22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.78 sec Start 23: demo_interpolation_different_meshes_mpi_3 23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.83 sec Start 24: demo_interpolation_different_meshes_serial 24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.86 sec 100% tests passed, 0 tests failed out of 24 Total Test time (real) = 25.80 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/main.cpp.o -MF CMakeFiles/unittests.dir/main.cpp.o.d -o CMakeFiles/unittests.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/main.cpp [ 17%] Building CXX object CMakeFiles/unittests.dir/vector.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/vector.cpp.o -MF CMakeFiles/unittests.dir/vector.cpp.o.d -o CMakeFiles/unittests.dir/vector.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/vector.cpp [ 23%] Building CXX object CMakeFiles/unittests.dir/matrix.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/matrix.cpp.o -MF CMakeFiles/unittests.dir/matrix.cpp.o.d -o CMakeFiles/unittests.dir/matrix.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/matrix.cpp [ 29%] Building CXX object CMakeFiles/unittests.dir/io.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/io.cpp.o -MF CMakeFiles/unittests.dir/io.cpp.o.d -o CMakeFiles/unittests.dir/io.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/io.cpp [ 35%] Building CXX object CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -MF CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o.d -o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sub_systems_manager.cpp [ 41%] Building CXX object CMakeFiles/unittests.dir/common/index_map.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/index_map.cpp.o -MF CMakeFiles/unittests.dir/common/index_map.cpp.o.d -o CMakeFiles/unittests.dir/common/index_map.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/index_map.cpp [ 47%] Building CXX object CMakeFiles/unittests.dir/common/sort.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sort.cpp.o -MF CMakeFiles/unittests.dir/common/sort.cpp.o.d -o CMakeFiles/unittests.dir/common/sort.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sort.cpp [ 52%] Building CXX object CMakeFiles/unittests.dir/fem/functionspace.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/fem/functionspace.cpp.o -MF CMakeFiles/unittests.dir/fem/functionspace.cpp.o.d -o CMakeFiles/unittests.dir/fem/functionspace.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/fem/functionspace.cpp [ 58%] Building CXX object CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -MF CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o.d -o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/distributed_mesh.cpp [ 64%] Building CXX object CMakeFiles/unittests.dir/mesh/generation.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/generation.cpp.o -MF CMakeFiles/unittests.dir/mesh/generation.cpp.o.d -o CMakeFiles/unittests.dir/mesh/generation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/generation.cpp [ 70%] Building CXX object CMakeFiles/unittests.dir/common/CIFailure.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/CIFailure.cpp.o -MF CMakeFiles/unittests.dir/common/CIFailure.cpp.o.d -o CMakeFiles/unittests.dir/common/CIFailure.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/CIFailure.cpp [ 76%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/interval.cpp [ 82%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/option.cpp [ 88%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/rectangle.cpp [ 94%] Building C object CMakeFiles/unittests.dir/poisson.c.o /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/unittests.dir/link.d CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.68 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.68 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode -- Configuring done (2.9s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 4%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 9%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 13%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/biharmonic.c [ 18%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_biharmonic.dir/link.d CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 18%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 22%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 27%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -MF CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o.d -o CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp [ 31%] Building C object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/mixed_codim0.c [ 36%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_codim_0_assembly.dir/link.d CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 36%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 40%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 45%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_custom_kernel.dir/link.d CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 45%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 50%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 54%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 59%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/poisson.c [ 63%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_poisson.dir/link.d CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 63%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 68%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 72%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 77%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/poisson.c [ 81%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_poisson_matrix_free.dir/link.d CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 81%] Built target demo_poisson_matrix_free make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 86%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 90%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_interpolation-io.dir/link.d "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 90%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 95%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file=CMakeFiles/demo_interpolation_different_meshes.dir/link.d CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.58 sec Start 2: demo_biharmonic_mpi_3 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.54 sec Start 3: demo_biharmonic_serial 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.51 sec Start 4: demo_codim_0_assembly_mpi_2 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.41 sec Start 5: demo_codim_0_assembly_mpi_3 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.42 sec Start 6: demo_codim_0_assembly_serial 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.33 sec Start 7: demo_custom_kernel_mpi_2 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.96 sec Start 8: demo_custom_kernel_mpi_3 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.90 sec Start 9: demo_custom_kernel_serial 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.86 sec Start 10: demo_poisson_mpi_2 10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.45 sec Start 11: demo_poisson_mpi_3 11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.45 sec Start 12: demo_poisson_serial 12/21 Test #12: demo_poisson_serial .......................... Passed 0.42 sec Start 13: demo_poisson_matrix_free_mpi_2 13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.44 sec Start 14: demo_poisson_matrix_free_mpi_3 14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.41 sec Start 15: demo_poisson_matrix_free_serial 15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.32 sec Start 16: demo_interpolation-io_mpi_2 16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.42 sec Start 17: demo_interpolation-io_mpi_3 17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.44 sec Start 18: demo_interpolation-io_serial 18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.34 sec Start 19: demo_interpolation_different_meshes_mpi_2 19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.74 sec Start 20: demo_interpolation_different_meshes_mpi_3 20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.67 sec Start 21: demo_interpolation_different_meshes_serial 21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.83 sec 100% tests passed, 0 tests failed out of 21 Total Test time (real) = 21.46 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' (cd cpp/doc; doxygen) warning: Tag 'HTML_TIMESTAMP' at line 1387 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 2055 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Reading and parsing tag files Parsing files Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/README.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... Generating group documentation... Generating class documentation... Generating docs for compound HyperElasticProblem... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound basix::FiniteElement... Generating docs for namespace dolfinx Generating docs for compound dolfinx::Table... Generating docs for concept dolfinx::scalar... Generating docs for namespace dolfinx::common Generating docs for compound dolfinx::common::IndexMap... Generating docs for compound dolfinx::common::Scatterer... Generating docs for compound dolfinx::common::TimeLogger... Generating docs for compound dolfinx::common::TimeLogManager... Generating docs for compound dolfinx::common::Timer... Generating docs for namespace dolfinx::fem Generating docs for compound dolfinx::fem::Constant... Generating docs for compound dolfinx::fem::CoordinateElement... Generating docs for compound dolfinx::fem::DirichletBC... Generating docs for compound dolfinx::fem::DofMap... Generating docs for compound dolfinx::fem::ElementDofLayout... Generating docs for compound dolfinx::fem::Expression... Generating docs for compound dolfinx::fem::FiniteElement... Generating docs for compound dolfinx::fem::Form... Generating docs for compound dolfinx::fem::Function... Generating docs for compound dolfinx::fem::FunctionSpace... Generating docs for compound dolfinx::fem::integral_data... Generating docs for concept dolfinx::fem::MDSpan... Generating docs for concept dolfinx::fem::DofTransformKernel... Generating docs for concept dolfinx::fem::FEkernel... Generating docs for concept dolfinx::fem::impl::FetchCells... Generating docs for namespace dolfinx::fem::petsc Generating docs for namespace dolfinx::fem::sparsitybuild Generating docs for namespace dolfinx::geometry Generating docs for compound dolfinx::geometry::BoundingBoxTree... Generating docs for compound dolfinx::geometry::PointOwnershipData... Generating docs for namespace dolfinx::graph Generating docs for compound dolfinx::graph::AdjacencyList... Generating docs for namespace dolfinx::graph::build Generating docs for namespace dolfinx::graph::kahip Generating docs for namespace dolfinx::io Generating docs for compound dolfinx::io::ADIOS2Writer... Generating docs for compound dolfinx::io::VTKFile... Generating docs for compound dolfinx::io::XDMFFile... Generating docs for namespace dolfinx::io::cells Generating docs for namespace dolfinx::io::xdmf_function Generating docs for namespace dolfinx::io::xdmf_mesh Generating docs for namespace dolfinx::la Generating docs for compound dolfinx::la::MatrixCSR... Generating docs for compound dolfinx::la::SLEPcEigenSolver... Generating docs for compound dolfinx::la::SparsityPattern... Generating docs for compound dolfinx::la::Vector... Generating docs for concept dolfinx::la::MatSet... Generating docs for namespace dolfinx::la::petsc Generating docs for compound dolfinx::la::petsc::KrylovSolver... Generating docs for compound dolfinx::la::petsc::Matrix... Generating docs for compound dolfinx::la::petsc::Operator... Generating docs for compound dolfinx::la::petsc::Vector... Generating docs for namespace dolfinx::la::petsc::options Generating docs for namespace dolfinx::mesh Generating docs for compound dolfinx::mesh::Geometry... Generating docs for compound dolfinx::mesh::Mesh... Generating docs for compound dolfinx::mesh::MeshTags... Generating docs for compound dolfinx::mesh::Topology... Generating docs for concept dolfinx::mesh::MarkerFn... Generating docs for namespace dolfinx::MPI Generating docs for compound dolfinx::MPI::Comm... Generating docs for compound dolfinx::MPI::dependent_false... Generating docs for namespace dolfinx::nls Generating docs for compound dolfinx::nls::petsc::NewtonSolver... Generating docs for namespace dolfinx::refinement Generating docs for namespace dolfinx::refinement::plaza Generating graph info page... Generating directory documentation... Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class dolfinx::io::ADIOS2Writer Generating XML output for class dolfinx::graph::AdjacencyList Generating XML output for class dolfinx::geometry::BoundingBoxTree Generating XML output for class dolfinx::MPI::Comm Generating XML output for class dolfinx::fem::Constant Generating XML output for class dolfinx::fem::CoordinateElement Generating XML output for class dolfinx::MPI::dependent_false Generating XML output for class dolfinx::fem::DirichletBC Generating XML output for class dolfinx::fem::DofMap Generating XML output for class dolfinx::fem::ElementDofLayout Generating XML output for class dolfinx::fem::Expression Generating XML output for class dolfinx::io::FidesWriter Generating XML output for class basix::FiniteElement Generating XML output for class dolfinx::fem::FiniteElement Generating XML output for class dolfinx::fem::Form Generating XML output for class dolfinx::fem::Function Generating XML output for class dolfinx::fem::FunctionSpace Generating XML output for class dolfinx::mesh::Geometry Generating XML output for class HyperElasticProblem Generating XML output for class dolfinx::common::IndexMap Generating XML output for class dolfinx::fem::integral_data Generating XML output for class dolfinx::la::petsc::KrylovSolver Generating XML output for class dolfinx::la::petsc::Matrix Generating XML output for class dolfinx::la::MatrixCSR Generating XML output for class dolfinx::mesh::Mesh Generating XML output for class dolfinx::mesh::MeshTags Generating XML output for class dolfinx::nls::petsc::NewtonSolver Generating XML output for class dolfinx::la::petsc::Operator Generating XML output for class dolfinx::geometry::PointOwnershipData Generating XML output for class dolfinx::scalar_value_type Generating XML output for class dolfinx::scalar_value_type< T, std::void_t< typename T::value_type > > Generating XML output for class dolfinx::common::Scatterer Generating XML output for class dolfinx::la::SLEPcEigenSolver Generating XML output for class dolfinx::la::SparsityPattern Generating XML output for class dolfinx::Table Generating XML output for class dolfinx::common::TimeLogger Generating XML output for class dolfinx::common::TimeLogManager Generating XML output for class dolfinx::common::Timer Generating XML output for class dolfinx::mesh::Topology Generating XML output for class dolfinx::la::petsc::Vector Generating XML output for class dolfinx::la::Vector Generating XML output for class dolfinx::io::VTKFile Generating XML output for class dolfinx::io::VTXWriter Generating XML output for class dolfinx::io::XDMFFile Generating XML output for concept dolfinx::fem::DofTransformKernel Generating XML output for concept dolfinx::fem::FEkernel Generating XML output for concept dolfinx::fem::impl::FetchCells Generating XML output for concept dolfinx::fem::MDSpan Generating XML output for concept dolfinx::la::MatSet Generating XML output for concept dolfinx::mesh::MarkerFn Generating XML output for concept dolfinx::scalar Generating XML output for namespace @104 Generating XML output for namespace @108 Generating XML output for namespace @110 Generating XML output for namespace @112 Generating XML output for namespace @117 Generating XML output for namespace @122 Generating XML output for namespace @13 Generating XML output for namespace @33 Generating XML output for namespace @36 Generating XML output for namespace @38 Generating XML output for namespace @4 Generating XML output for namespace @44 Generating XML output for namespace @63 Generating XML output for namespace @67 Generating XML output for namespace @69 Generating XML output for namespace @71 Generating XML output for namespace @74 Generating XML output for namespace @78 Generating XML output for namespace @80 Generating XML output for namespace @84 Generating XML output for namespace basix Generating XML output for namespace biharmonic Generating XML output for namespace dolfinx Generating XML output for namespace dolfinx::common Generating XML output for namespace dolfinx::fem Generating XML output for namespace dolfinx::fem::impl Generating XML output for namespace dolfinx::fem::petsc Generating XML output for namespace dolfinx::fem::sparsitybuild Generating XML output for namespace dolfinx::geometry Generating XML output for namespace dolfinx::geometry::impl Generating XML output for namespace dolfinx::geometry::impl_bb Generating XML output for namespace dolfinx::geometry::impl_gjk Generating XML output for namespace dolfinx::graph Generating XML output for namespace dolfinx::graph::build Generating XML output for namespace dolfinx::graph::kahip Generating XML output for namespace dolfinx::graph::parmetis Generating XML output for namespace dolfinx::graph::scotch Generating XML output for namespace dolfinx::io Generating XML output for namespace dolfinx::io::adios2_writer Generating XML output for namespace dolfinx::io::cells Generating XML output for namespace dolfinx::io::hdf5 Generating XML output for namespace dolfinx::io::impl Generating XML output for namespace dolfinx::io::impl_adios2 Generating XML output for namespace dolfinx::io::impl_fides Generating XML output for namespace dolfinx::io::impl_vtx Generating XML output for namespace dolfinx::io::xdmf_function Generating XML output for namespace dolfinx::io::xdmf_mesh Generating XML output for namespace dolfinx::io::xdmf_utils Generating XML output for namespace dolfinx::la Generating XML output for namespace dolfinx::la::impl Generating XML output for namespace dolfinx::la::petsc Generating XML output for namespace dolfinx::la::petsc::options Generating XML output for namespace dolfinx::math Generating XML output for namespace dolfinx::mesh Generating XML output for namespace dolfinx::mesh::impl Generating XML output for namespace dolfinx::MPI Generating XML output for namespace dolfinx::nls Generating XML output for namespace dolfinx::nls::petsc Generating XML output for namespace dolfinx::refinement Generating XML output for namespace dolfinx::refinement::impl Generating XML output for namespace dolfinx::refinement::interval Generating XML output for namespace dolfinx::refinement::plaza Generating XML output for namespace dolfinx::refinement::plaza::impl Generating XML output for namespace hyperelasticity Generating XML output for namespace linalg Generating XML output for namespace mixed_codim0 Generating XML output for namespace poisson Generating XML output for namespace pugi Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md Generating XML output for file defines.cpp Generating XML output for file defines.h Generating XML output for file dolfinx_common.h Generating XML output for file dolfinx_doc.h Generating XML output for file IndexMap.cpp Generating XML output for file IndexMap.h Generating XML output for file log.cpp Generating XML output for file log.h Generating XML output for file math.h Generating XML output for file MPI.cpp Generating XML output for file MPI.h Generating XML output for file Scatterer.h Generating XML output for file sort.h Generating XML output for file Table.cpp Generating XML output for file Table.h Generating XML output for file TimeLogger.cpp Generating XML output for file TimeLogger.h Generating XML output for file TimeLogManager.cpp Generating XML output for file TimeLogManager.h Generating XML output for file Timer.cpp Generating XML output for file Timer.h Generating XML output for file timing.cpp Generating XML output for file timing.h Generating XML output for file types.h Generating XML output for file dolfinx.h Generating XML output for file assemble_matrix_impl.h Generating XML output for file assemble_scalar_impl.h Generating XML output for file assemble_vector_impl.h Generating XML output for file assembler.h Generating XML output for file Constant.h Generating XML output for file CoordinateElement.cpp Generating XML output for file CoordinateElement.h Generating XML output for file DirichletBC.cpp Generating XML output for file DirichletBC.h Generating XML output for file discreteoperators.h Generating XML output for file DofMap.cpp Generating XML output for file DofMap.h Generating XML output for file dofmapbuilder.cpp Generating XML output for file dofmapbuilder.h Generating XML output for file dolfinx_fem.h Generating XML output for file ElementDofLayout.cpp Generating XML output for file ElementDofLayout.h Generating XML output for file Expression.h Generating XML output for file FiniteElement.cpp Generating XML output for file FiniteElement.h Generating XML output for file Form.h Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h Generating XML output for file petsc.cpp Generating XML output for file petsc.cpp Generating XML output for file petsc.h Generating XML output for file petsc.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp Generating XML output for file ordering.h Generating XML output for file partition.cpp Generating XML output for file partition.h Generating XML output for file partitioners.cpp Generating XML output for file partitioners.h Generating XML output for file ADIOS2Writers.cpp Generating XML output for file ADIOS2Writers.h Generating XML output for file cells.cpp Generating XML output for file cells.h Generating XML output for file dolfinx_io.h Generating XML output for file HDF5Interface.cpp Generating XML output for file HDF5Interface.h Generating XML output for file vtk_utils.cpp Generating XML output for file vtk_utils.h Generating XML output for file VTKFile.cpp Generating XML output for file VTKFile.h Generating XML output for file xdmf_function.cpp Generating XML output for file xdmf_function.h Generating XML output for file xdmf_mesh.cpp Generating XML output for file xdmf_mesh.h Generating XML output for file xdmf_utils.cpp Generating XML output for file xdmf_utils.h Generating XML output for file XDMFFile.cpp Generating XML output for file XDMFFile.h Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp Generating XML output for file SparsityPattern.h Generating XML output for file Vector.h Generating XML output for file cell_types.cpp Generating XML output for file cell_types.h Generating XML output for file dolfinx_mesh.h Generating XML output for file generation.h Generating XML output for file Geometry.h Generating XML output for file graphbuild.cpp Generating XML output for file graphbuild.h Generating XML output for file Mesh.h Generating XML output for file MeshTags.h Generating XML output for file permutationcomputation.cpp Generating XML output for file permutationcomputation.h Generating XML output for file Topology.cpp Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h Generating XML output for file dolfinx_refinement.h Generating XML output for file interval.h Generating XML output for file option.h Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/ Generating XML output for the main page Running plantuml with JAVA... Running dot... Generating dot graphs using 13 parallel threads... 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(cd python/doc; \ mkdir -p build/pkgconfig; \ cp /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc build/pkgconfig; \ sed "s|prefix=/usr|prefix=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr|" -i build/pkgconfig/dolfinx_real.pc; \ PYTHONPATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/python3.12/dist-packages \ PKG_CONFIG_PATH=`pwd`/build/pkgconfig:${PKG_CONFIG_PATH} \ LD_LIBRARY_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/:${LD_LIBRARY_PATH} \ XDG_CACHE_HOME=`pwd`/build \ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v8.1.3 Matplotlib created a temporary cache directory at /tmp/matplotlib-3xu2c3y5 because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 TNT degree 2 error: 0.0029421918345155706 TNT degree 2 error: 0.00017118942553986645 TNT degree 3 error: 8.385106828741459e-06 TNT degree 4 error: 3.394990202481274e-07 TNT degree 5 error: 1.2528243134807086e-08 TNT degree 6 error: 4.242815777296747e-10 TNT degree 7 error: 1.9793321846863418e-10 TNT degree 8 error: 2.936082763687583e-10 Q degree 1 error: 0.04076382001057708 Q degree 2 error: 0.0029182213395268983 Q degree 3 error: 0.00015944660110819758 Q degree 4 error: 7.937421445106366e-06 Q degree 5 error: 3.1034668624396663e-07 Q degree 6 error: 1.1356498986978607e-08 Q degree 7 error: 3.416145918786947e-10 Q degree 8 error: 6.191008477221316e-11 loading translations [en]... done making output directory... done [autosummary] generating autosummary for: api.rst, contributing.rst, demos.rst, demos/demo_axis.md, demos/demo_biharmonic.md, demos/demo_cahn-hilliard.md, demos/demo_elasticity.md, demos/demo_gmsh.md, demos/demo_half_loaded_waveguide.md, demos/demo_hdg.md, ..., demos/demo_pyvista.md, demos/demo_scattering_boundary_conditions.md, demos/demo_static-condensation.md, demos/demo_stokes.md, demos/demo_tnt-elements.md, demos/demo_types.md, developer.rst, index.rst, installation.rst, styleguide_cpp.rst [autosummary] generating autosummary for: /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.log.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.mesh.rst, ..., /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.gmshio.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.jit.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.mesh.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.nls.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.pkgconfig.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.plot.rst myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'dollarmath'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 29 source files that are out of date updating environment: [new config] 54 added, 0 changed, 0 removed reading sources... [ 2%] api reading sources... [ 4%] contributing reading sources... [ 6%] demos reading sources... [ 7%] demos/demo_axis reading sources... [ 9%] demos/demo_biharmonic reading sources... [ 11%] demos/demo_cahn-hilliard reading sources... [ 13%] demos/demo_elasticity reading sources... [ 15%] demos/demo_gmsh reading sources... [ 17%] demos/demo_half_loaded_waveguide reading sources... [ 19%] demos/demo_hdg reading sources... [ 20%] demos/demo_helmholtz reading sources... [ 22%] demos/demo_interpolation-io reading sources... [ 24%] demos/demo_lagrange_variants reading sources... [ 26%] demos/demo_mixed-poisson reading sources... [ 28%] demos/demo_navier-stokes reading sources... [ 30%] demos/demo_pml reading sources... [ 31%] demos/demo_poisson reading sources... [ 33%] demos/demo_poisson_matrix_free reading sources... [ 35%] demos/demo_pyamg reading sources... [ 37%] demos/demo_pyvista reading sources... [ 39%] demos/demo_scattering_boundary_conditions reading sources... [ 41%] demos/demo_static-condensation reading sources... [ 43%] demos/demo_stokes reading sources... [ 44%] demos/demo_tnt-elements reading sources... [ 46%] demos/demo_types reading sources... [ 48%] developer reading sources... [ 50%] generated/dolfinx.common reading sources... [ 52%] generated/dolfinx.cpp.common reading sources... [ 54%] generated/dolfinx.cpp.fem reading sources... [ 56%] generated/dolfinx.cpp.fem.petsc reading sources... [ 57%] generated/dolfinx.cpp.geometry reading sources... [ 59%] generated/dolfinx.cpp.graph reading sources... [ 61%] generated/dolfinx.cpp.io reading sources... [ 63%] generated/dolfinx.cpp.la reading sources... [ 65%] generated/dolfinx.cpp.log reading sources... [ 67%] generated/dolfinx.cpp.mesh reading sources... [ 69%] generated/dolfinx.cpp.nls reading sources... [ 70%] generated/dolfinx.cpp.nls.petsc reading sources... [ 72%] generated/dolfinx.cpp.refinement reading sources... [ 74%] generated/dolfinx.fem reading sources... 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[100%] styleguide_cpp looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_axis.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_axis /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_biharmonic.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_cahn-hilliard.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_cahn-hilliard /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_elasticity.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_elasticity /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_gmsh.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_gmsh /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_half_loaded_waveguide.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_half_loaded_waveguide /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_hdg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_hdg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_helmholtz.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_helmholtz /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_interpolation-io.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_lagrange_variants.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_lagrange_variants /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_mixed-poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_mixed-poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_navier-stokes.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_navier-stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pml.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pml /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyamg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyamg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyvista.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyvista /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_scattering_boundary_conditions.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_scattering_boundary_conditions /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_static-condensation.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_static-condensation /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_stokes.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_tnt-elements.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_tnt-elements /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_types.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_types done preparing documents... done copying assets... copying downloadable files... [ 6%] demos/demo_biharmonic.py copying downloadable files... [ 12%] demos/demo_cahn-hilliard.py copying downloadable files... [ 18%] demos/demo_elasticity.py copying downloadable files... [ 24%] demos/demo_gmsh.py copying downloadable files... [ 29%] demos/demo_hdg.py copying downloadable files... [ 35%] demos/demo_interpolation-io.py copying downloadable files... [ 41%] demos/demo_lagrange_variants.py copying downloadable files... [ 47%] demos/demo_mixed-poisson.py copying downloadable files... [ 53%] demos/demo_mixed-poisson.ipynb copying downloadable files... [ 59%] demos/demo_navier-stokes.py copying downloadable files... [ 65%] demos/demo_poisson.py copying downloadable files... [ 71%] demos/demo_poisson_matrix_free.py copying downloadable files... [ 76%] demos/demo_poisson_matrix_free.ipynb copying downloadable files... [ 82%] demos/demo_pyamg.py copying downloadable files... [ 88%] demos/demo_stokes.py copying downloadable files... [ 94%] demos/demo_tnt-elements.py copying downloadable files... [100%] demos/demo_types.py copying static files... Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/documentation_options.js Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/basic.css Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/js/versions.js copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 2%] api writing output... [ 4%] contributing writing output... [ 6%] demos writing output... [ 7%] demos/demo_axis writing output... [ 9%] demos/demo_biharmonic writing output... [ 11%] demos/demo_cahn-hilliard writing output... [ 13%] demos/demo_elasticity writing output... [ 15%] demos/demo_gmsh writing output... [ 17%] demos/demo_half_loaded_waveguide writing output... [ 19%] demos/demo_hdg writing output... [ 20%] demos/demo_helmholtz writing output... [ 22%] demos/demo_interpolation-io writing output... [ 24%] demos/demo_lagrange_variants writing output... [ 26%] demos/demo_mixed-poisson writing output... [ 28%] demos/demo_navier-stokes writing output... [ 30%] demos/demo_pml writing output... [ 31%] demos/demo_poisson writing output... [ 33%] demos/demo_poisson_matrix_free writing output... [ 35%] demos/demo_pyamg writing output... [ 37%] demos/demo_pyvista writing output... [ 39%] demos/demo_scattering_boundary_conditions writing output... [ 41%] demos/demo_static-condensation writing output... [ 43%] demos/demo_stokes writing output... [ 44%] demos/demo_tnt-elements writing output... [ 46%] demos/demo_types writing output... [ 48%] developer writing output... [ 50%] generated/dolfinx.common writing output... [ 52%] generated/dolfinx.cpp.common writing output... [ 54%] generated/dolfinx.cpp.fem writing output... [ 56%] generated/dolfinx.cpp.fem.petsc writing output... [ 57%] generated/dolfinx.cpp.geometry writing output... [ 59%] generated/dolfinx.cpp.graph writing output... [ 61%] generated/dolfinx.cpp.io writing output... [ 63%] generated/dolfinx.cpp.la writing output... [ 65%] generated/dolfinx.cpp.log writing output... [ 67%] generated/dolfinx.cpp.mesh writing output... [ 69%] generated/dolfinx.cpp.nls writing output... [ 70%] generated/dolfinx.cpp.nls.petsc writing output... [ 72%] generated/dolfinx.cpp.refinement writing output... [ 74%] generated/dolfinx.fem writing output... [ 76%] generated/dolfinx.fem.petsc writing output... [ 78%] generated/dolfinx.geometry writing output... [ 80%] generated/dolfinx.graph writing output... [ 81%] generated/dolfinx.io writing output... [ 83%] generated/dolfinx.io.gmshio writing output... 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[100%] dolfinx.plot writing additional pages... search done copying images... [ 17%] demos/demo_lagrange_variants_equispaced_10.png copying images... [ 33%] demos/demo_lagrange_variants_gll_10.png copying images... [ 50%] demos/demo_lagrange_variants_interpolation_equispaced.png copying images... [ 67%] demos/demo_lagrange_variants_interpolation_gll_warped.png copying images... [ 83%] demos/demo_tnt-elements_degrees_vs_error.png copying images... [100%] demos/demo_tnt-elements_ndofs_vs_error.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in .pybuild/html. dh_numpy3 -i make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -a sed "s/set(CMAKE_IMPORT_FILE_VERSION 1)/set(CMAKE_IMPORT_FILE_VERSION 1)\n\nif(PETSC_SCALAR_COMPLEX)\n set(LIB_NAME_EXT \"_complex\")\nelse()\n set(LIB_NAME_EXT \"_real\")\nendif()/; \ s/libdolfinx_real.so/libdolfinx\${LIB_NAME_EXT}.so/g" \ -i debian/libdolfinx-dev/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex dh_installdocs -O--buildsystem=cmake dh_installdocs: warning: Cannot auto-detect main package for dolfinx-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -a dh_numpy3 -a mkdir -p debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib mv debian/python3-dolfinx-real/usr/lib/python3 debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib rm -rf debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfinx_utils mkdir -p debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib mv debian/python3-dolfinx-complex/usr/lib/python3 debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib rm -rf debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/dolfinx_utils make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex E: dh_python3 dh_python3:198: no package to act on (python3-foo or one with ${python3:Depends} in Depends) dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_dwz -Xcpp.cpython make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_strip --package=libdolfinx-real0.9 -Xcomplex -Xpython dh_strip --package=libdolfinx-complex0.9 -Xreal -Xpython dh_strip --package=python3-dolfinx-real make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "python3-petsc4py-real:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.22), python3-petsc4py-real (<< 3.23), python3-slepc4py-real (>= 3.22), python3-slepc4py-real (<< 3.23)" >> debian/python3-dolfinx-real.substvars echo "python3-petsc4py-complex:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= 3.22), python3-petsc4py-complex (<< 3.23), python3-slepc4py-complex (>= 3.22), python3-slepc4py-complex (<< 3.23)" >> debian/python3-dolfinx-complex.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.22), python3-petsc4py-real (<< 3.23), python3-slepc4py-real (>= 3.22), python3-slepc4py-real (<< 3.23)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.22-dev, libslepc-real3.22-dev" -Vpetsc-complex:Depends="libpetsc-complex3.22-dev, libslepc-complex3.22-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.4 -Vnanobind:Next-Upstream-Version=3 dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-5_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-5_amd64.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-5_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-5_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-5_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-5_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/518747/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/518747/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/518747 and its subdirectories I: Current time: Tue Jan 27 21:06:55 +14 2026 I: pbuilder-time-stamp: 1769497615