I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 24 02:31:14 +14 2024 I: pbuilder-time-stamp: 1732365074 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dipy_1.10.0~rc1-2.dsc] I: copying [./dipy_1.10.0~rc1.orig.tar.gz] I: copying [./dipy_1.10.0~rc1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 22 10:33:58 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: issuer "crusoe@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dipy_1.10.0~rc1-2.dsc: no acceptable signature found dpkg-source: info: extracting dipy in dipy-1.10.0~rc1 dpkg-source: info: unpacking dipy_1.10.0~rc1.orig.tar.gz dpkg-source: info: unpacking dipy_1.10.0~rc1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb_no_sources_for_docs dpkg-source: info: applying skip-tests-needing-internet.patch dpkg-source: info: applying fix-i386.patch dpkg-source: info: applying skip_wall-clock_test.patch dpkg-source: info: applying no-network.patch dpkg-source: info: applying sphinx-default.patch dpkg-source: info: applying fix-privacy-breaches.patch dpkg-source: info: applying tests_ignore_duration dpkg-source: info: applying tests_tempdir I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/522865/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 23 12:31 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/522865/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/522865/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=5802e504d17d47b3ba7687f9ec0d7c6f LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=522865 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VKLjsBz0/pbuilderrc_X2py --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VKLjsBz0/b2 --logfile b2/build.log dipy_1.10.0~rc1-2.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/522865/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, pkgconf, libgomp1, cython3, python3-all-dev:native, libpython3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py, python3-matplotlib, python3-nibabel, python3-pil.imagetk, python3-pytest, python3-pandas, python3-tables, python3-tk, python3-trx-python, python3-sklearn, python3-tqdm, xvfb, xauth, python3-sphinx, python3-numpydoc, python3-skimage, python3-sphinx-design, python3-sphinxcontrib.bibtex, python3-doc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:native. pbuilder-satisfydepends-dummy depends on libpython3-all-dev; however: Package libpython3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-mesonpy; however: Package python3-mesonpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-nibabel; however: Package python3-nibabel is not installed. pbuilder-satisfydepends-dummy depends on python3-pil.imagetk; however: Package python3-pil.imagetk is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-tables; however: Package python3-tables is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on python3-trx-python; however: Package python3-trx-python is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm; however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on xvfb; however: Package xvfb is not installed. pbuilder-satisfydepends-dummy depends on xauth; however: Package xauth is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-skimage; however: Package python3-skimage is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.bibtex; however: Package python3-sphinxcontrib.bibtex is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libblosc1{a} libblosc2-4{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm19{a} liblzf1{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpciaccess0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsnappy1v5{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libunwind8{a} libvulkan1{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxft2{a} libxkbfile1{a} libxml2{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libxxf86vm1{a} libyaml-0-2{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} meson{a} netbase{a} ninja-build{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python-tables-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cpuinfo{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-deepdiff{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imageio{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-joblib{a} python3-jsonpickle{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lazy-loader{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-mesonpy{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-networkx{a} python3-nibabel{a} python3-numexpr{a} python3-numpy{a} python3-numpydoc{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-pybtex{a} python3-pybtex-docutils{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-skimage{a} python3-skimage-lib{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-design{a} python3-sphinxcontrib.bibtex{a} python3-sympy{a} python3-tables{a} python3-tables-lib{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tifffile{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-trx-python{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} x11-xkb-utils{a} xauth{a} xkb-data{a} xml-core{a} xserver-common{a} xvfb{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx mesa-vulkan-drivers patchelf psmisc publicsuffix python3-bottleneck python3-bs4 python3-clevercsv python3-cssselect python3-dask python3-dipy python3-fuse python3-gdal python3-html5lib python3-numba python3-odf python3-olefile python3-openpyxl python3-pooch python3-psutil python3-pydicom python3-pydot python3-pygraphviz python3-simplejson shared-mime-info wget xdg-user-dirs xfonts-base 0 packages upgraded, 307 newly installed, 0 to remove and 0 not upgraded. Need to get 271 MB of archives. After unpacking 1235 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.0-2 [856 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.0-2 [2038 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 66 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.11+dfsg-1+b1 [3157 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 73 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 87 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libblosc1 amd64 1.21.5+ds-1+b2 [49.5 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libblosc2-4 amd64 2.15.1+ds-1 [192 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 111 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b1 [23.3 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.2.7-1 [37.9 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-2 [26.0 MB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B] Get: 134 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.2.7-1 [9186 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.2.7-1 [42.8 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.2.7-1 [43.9 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.2.7-1 [154 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 151 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.7-1 [9976 B] Get: 175 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [1992 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.0-2 [2137 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.0-2 [4994 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.7-1 [1072 B] Get: 179 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libunwind8 amd64 1.7.2-1 [52.8 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libxfont2 amd64 1:2.0.6-1+b2 [132 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libxkbfile1 amd64 1:1.1.0-1+b2 [76.5 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libxmuu1 amd64 2:1.1.3-3+b3 [21.9 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b1 [36.3 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 ninja-build amd64 1.12.1-1 [142 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 meson all 1.6.0-1 [628 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.45.0-1 [56.7 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.16.0-1 [5696 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 python-tables-data all 3.10.1-1 [49.5 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.0-2 [730 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 215 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.7-1 [26.1 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.0-2 [504 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.7-1 [1076 B] Get: 219 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.16.0-1 [114 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b6 [321 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 224 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2+b1 [264 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 python3-cpuinfo all 9.0.0+git20221119-2 [23.4 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 230 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 python3-jsonpickle all 4.0.0+dfsg-1 [47.8 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 234 http://deb.debian.org/debian unstable/main amd64 python3-deepdiff all 6.7.1-2 [65.6 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 python3.12-doc all 3.12.7-3 [13.4 MB] Get: 237 http://deb.debian.org/debian unstable/main amd64 python3-doc all 3.12.7-1 [9900 B] Get: 238 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b5 [25.6 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-2 [20.5 MB] Get: 246 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.55.0-3 [1634 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-8+b1 [1460 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-8 [14.9 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-2 [103 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.7-1 [9444 B] Get: 257 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1+b1 [79.8 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1+b1 [522 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 python3-imageio all 2.36.0-1 [229 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 261 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 262 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 python3-joblib all 1.3.2-5 [216 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2+b1 [77.0 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 python3-lazy-loader all 0.4-1 [13.5 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3+b1 [5654 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-metadata all 0.9.0~rc1-1 [20.9 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 python3-mesonpy all 0.17.1-1 [108 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 python3-networkx all 3.2.1-4 [14.2 MB] Get: 273 http://deb.debian.org/debian unstable/main amd64 python3-nibabel all 5.2.1-2 [2659 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 python3-numexpr amd64 2.10.1-2+b2 [129 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 277 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 python3-numpydoc all 1.6.0-2 [49.6 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-5+b1 [7307 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1+b1 [178 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 python3-pybtex all 0.24.0-4 [74.6 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 python3-pybtex-docutils all 1.0.2-1 [8064 B] Get: 289 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 python3-skimage-lib amd64 0.24.0-5+b1 [4362 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 python3-tifffile all 20240920-1 [186 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 python3-skimage all 0.24.0-5 [20.6 MB] Get: 294 http://deb.debian.org/debian unstable/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-6+b1 [6463 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 python3-sklearn all 1.4.2+dfsg-6 [2248 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-design all 0.6.1-1 [883 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.bibtex all 2.6.2-1 [32.4 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 python3-tables-lib amd64 3.10.1-1+b1 [771 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 python3-tables all 3.10.1-1 [355 kB] Get: 301 http://deb.debian.org/debian unstable/main amd64 python3-tqdm all 4.67.0-1 [90.2 kB] Get: 302 http://deb.debian.org/debian unstable/main amd64 python3-trx-python all 0.3-1 [40.2 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 x11-xkb-utils amd64 7.7+9 [159 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 xserver-common all 2:21.1.14-2 [2397 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 xvfb amd64 2:21.1.14-2 [3177 kB] Fetched 271 MB in 20s (13.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../001-libpython3.13-minimal_3.13.0-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../002-python3.13-minimal_3.13.0-2_amd64.deb ... Unpacking python3.13-minimal (3.13.0-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../007-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../008-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. 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Setting up libelf1t64:amd64 (0.192-4) ... Setting up python-babel-localedata (2.16.0-1) ... Setting up libsnappy1v5:amd64 (1.2.1-1+b1) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Nov 23 12:36:25 UTC 2024. Universal Time is now: Sat Nov 23 12:36:25 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... Setting up unicode-data (15.1.0-1) ... Setting up libpython3.13-minimal:amd64 (3.13.0-2) ... Setting up libblosc2-4:amd64 (2.15.1+ds-1) ... Setting up libfontenc1:amd64 (1:1.1.8-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libglib2.0-0t64:amd64 (2.82.2-3) ... No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libexpat1-dev:amd64 (2.6.4-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up liblzf1:amd64 (3.6-4+b2) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up libimagequant0:amd64 (2.18.0-1+b2) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-2) ... Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... 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Setting up libice6:amd64 (2:1.1.1-1) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxpm4:amd64 (1:3.5.17-1+b2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 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Setting up python3-tqdm (4.67.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:amd64 (3.12.7-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1+b1) ... Setting up libpython3-all-dev:amd64 (3.12.7-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.7-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.7-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up meson (1.6.0-1) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-mesonpy (0.17.1-1) ... Setting up python3-contourpy (1.3.0-2+b1) ... Setting up python3-imageio (2.36.0-1) ... Setting up dh-python (6.20241024) ... Setting up python3-deepdiff (6.7.1-2) ... Setting up python3-scipy (1.14.1-2) ... Setting up python3-skimage-lib:amd64 (0.24.0-5+b1) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-tables-lib (3.10.1-1+b1) ... Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5+b1) ... Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-6+b1) ... Setting up python3-h5py-serial (3.11.0-8+b1) ... Setting up python3-tifffile (20240920-1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-nibabel (5.2.1-2) ... Setting up python3-h5py (3.11.0-8) ... Setting up python3-sklearn (1.4.2+dfsg-6) ... Setting up python3-numexpr (2.10.1-2+b2) ... Setting up python3-trx-python (0.3-1) ... Setting up python3-tables (3.10.1-1) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up python3-fonttools (4.55.0-3) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up python3-skimage (0.24.0-5) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-pybtex-docutils (1.0.2-1) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-sphinxcontrib.bibtex (2.6.2-1) ... Setting up python3-sphinx-design (0.6.1-1) ... Setting up python3-numpydoc (1.6.0-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/522865/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/522865/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/dipy-1.10.0~rc1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dipy_1.10.0~rc1-2_source.changes dpkg-buildpackage: info: source package dipy dpkg-buildpackage: info: source version 1.10.0~rc1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dipy-1.10.0~rc1/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_auto_clean || true rm -rf .pybuild __pycache__ find dipy -name "*\.c" -delete make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules execute_before_dh_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' rm -rf build doc-stamp /usr/bin/make -C doc clean make[2]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1/doc' rm -rf reference/*.rst rm -rf reference_cmd/*.rst rm -rf examples_revamped cd examples_built && find . -not -name "README" -not -name ".gitignore" -exec rm -rfd {} \; || true rm: refusing to remove '.' or '..' directory: skipping '.' rm -rf _build/* rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[2]: [Makefile:32: clean] Error 1 (ignored) make[2]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' chmod 0644 doc/examples/*.py dh_auto_build I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.13_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.10.0~rc1 /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/x86_64-linux-gnu --native-file=/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/meson-python-native-file.ini The Meson build system Version: 1.6.0 Source dir: /build/reproducible-path/dipy-1.10.0~rc1 Build dir: /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms Build type: native build Project name: dipy Project version: 1.10.0.dev0 C compiler for the host machine: cc (gcc 14.2.0 "cc (Debian 14.2.0-8) 14.2.0") C linker for the host machine: cc ld.bfd 2.43.1 C++ compiler for the host machine: c++ (gcc 14.2.0 "c++ (Debian 14.2.0-8) 14.2.0") C++ linker for the host machine: c++ ld.bfd 2.43.1 Cython compiler for the host machine: cython (cython 3.0.11) Host machine cpu family: x86_64 Host machine cpu: x86_64 Program python found: YES (/usr/bin/python3.13) Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1 Run-time dependency python found: YES 3.13 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: YES Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 45 dipy 1.10.0.dev0 User defined options Native files : /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/meson-python-native-file.ini b_ndebug : if-release b_vscrt : md buildtype : release libdir : lib/x86_64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload Found ninja-1.12.1 at /usr/bin/ninja Generating targets: 0%| | 0/45 eta ? Generating targets: 36%|███▌ | 16/45 eta 00:00 Generating targets: 71%|███████ | 32/45 eta 00:00 Writing build.ninja: 0%| | 0/188 eta ? + /usr/bin/ninja --verbose [1/123] /usr/bin/python3 '/build/reproducible-path/dipy-1.10.0~rc1/dipy/../tools/gitversion.py' --meson-dist --write dipy/version.py [2/123] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [3/123] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [4/123] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [5/123] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [6/123] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [7/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/shift_twist_convolution.cpython-313-x86_64-linux-gnu.so.p/shift_twist_convolution.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/denoise/shift_twist_convolution.pyx [8/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so.p/denspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/denoise/denspeed.pyx [9/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/pmf.cpython-313-x86_64-linux-gnu.so.p/pmf.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/direction/pmf.pyx [10/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/pca_noise_estimate.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/denoise/pca_noise_estimate.pyx [11/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/transforms.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/transforms.pyx [12/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so.p/bundlemin.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/bundlemin.pyx [13/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so.p/quick_squash.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/reconst/quick_squash.pyx [14/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/vec_val_sum.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/reconst/vec_val_sum.pyx [15/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so.p/enhancement_kernel.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/denoise/enhancement_kernel.pyx [16/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/direction/closest_peak_direction_getter.pyx [17/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/direction/bootstrap_direction_getter.pyx [18/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/eudx_direction_getter.cpython-313-x86_64-linux-gnu.so.p/eudx_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/reconst/eudx_direction_getter.pyx [19/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/direction/probabilistic_direction_getter.pyx [20/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/ptt_direction_getter.cpython-313-x86_64-linux-gnu.so.p/ptt_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/direction/ptt_direction_getter.pyx [21/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/nlmeans_block.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/denoise/nlmeans_block.pyx [22/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/parzenhist.cpython-313-x86_64-linux-gnu.so.p/parzenhist.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/parzenhist.pyx [23/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/recspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/reconst/recspeed.pyx [24/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/sumsqdiff.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/sumsqdiff.pyx [25/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/crosscorr.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/crosscorr.pyx [26/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/expectmax.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/expectmax.pyx [27/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/cythonutils.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/cythonutils.pyx [28/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/interpolation.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/core/interpolation.pyx [29/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/omp.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/utils/omp.pyx [30/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/distances.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/distances.pyx [31/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/fast_numpy.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/utils/fast_numpy.pyx [32/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clusteringspeed.cpython-313-x86_64-linux-gnu.so.p/clusteringspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/clusteringspeed.pyx [33/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/featurespeed.cpython-313-x86_64-linux-gnu.so.p/featurespeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/featurespeed.pyx [34/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/mrf.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/mrf.pyx [35/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/clustering_algorithms.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/clustering_algorithms.pyx [36/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/propspeed.cpython-313-x86_64-linux-gnu.so.p/propspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/propspeed.pyx [37/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/metricspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/segment/metricspeed.pyx [38/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/fbcmeasures.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/fbcmeasures.pyx [39/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/streamlinespeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/streamlinespeed.pyx [40/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/direction_getter.cpython-313-x86_64-linux-gnu.so.p/direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/direction_getter.pyx [41/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/vox2track.cpython-313-x86_64-linux-gnu.so.p/vox2track.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/vox2track.pyx [42/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/stopping_criterion.pyx [43/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/test_fast_numpy.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/utils/tests/test_fast_numpy.pyx [44/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/localtrack.cpython-313-x86_64-linux-gnu.so.p/localtrack.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/tracking/localtrack.pyx [45/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/vector_fields.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy' ../dipy/align/vector_fields.pyx [46/123] cc -Idipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -MF 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dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so.p/quick_squash.c [48/123] cc -Idipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o 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-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/vec_val_sum.c [51/123] cc -Idipy/direction/pmf.cpython-313-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat 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'-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/nlmeans_block.c [54/123] cc -Idipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/pca_noise_estimate.c [55/123] cc -Idipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden 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dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so.p/enhancement_kernel.c [58/123] cc -Idipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c [59/123] cc -Idipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/transforms.c [60/123] cc -Idipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c [61/123] cc -Idipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/cythonutils.c [62/123] cc -Idipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/fast_numpy.c dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/fast_numpy.c:5153:13: warning: '__pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer' defined but not used [-Wunused-function] 5153 | static void __pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer(double *__pyx_v_arr, int __pyx_v_size) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [63/123] cc -Idipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/recspeed.c [64/123] cc -o dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [65/123] cc -o dipy/align/transforms.cpython-313-x86_64-linux-gnu.so dipy/align/transforms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [66/123] cc -Idipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/omp.c [67/123] cc -o dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [68/123] cc -o dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [69/123] cc -o dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [70/123] cc -o dipy/denoise/shift_twist_convolution.cpython-313-x86_64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-313-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [71/123] cc -o dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [72/123] cc -o dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [73/123] cc -o dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [74/123] cc -o dipy/direction/pmf.cpython-313-x86_64-linux-gnu.so dipy/direction/pmf.cpython-313-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [75/123] cc -o dipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [76/123] cc -o dipy/direction/ptt_direction_getter.cpython-313-x86_64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [77/123] cc -o dipy/reconst/eudx_direction_getter.cpython-313-x86_64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-313-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [78/123] cc -o dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [79/123] cc -o dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/123] cc -o dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [81/123] cc -o dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [82/123] cc -o dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [83/123] cc -o dipy/utils/omp.cpython-313-x86_64-linux-gnu.so dipy/utils/omp.cpython-313-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [84/123] cc -Idipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/clustering_algorithms.c [85/123] cc -o dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [86/123] cc -Idipy/align/parzenhist.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 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-fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/metricspeed.c [99/123] cc -o dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [100/123] cc -Idipy/tracking/vox2track.cpython-313-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ 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-I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/mrf.c [103/123] cc -o dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro 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dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/fbcmeasures.c [105/123] cc -o dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [106/123] cc -Idipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/sumsqdiff.c [107/123] cc -o dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [108/123] cc -Idipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/expectmax.c [109/123] cc -o dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [110/123] cc -Idipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.13/Python.h:39, from dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c:29891:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/stopping_criterion.c:29865:10: note: '*(long unsigned int *)(&__pyx_t_1[0])' was declared here 29865 | double __pyx_t_1[1]; | ^~~~~~~~~ [111/123] cc -o dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [112/123] cc -Idipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p -Idipy/utils/tests -I../dipy/utils/tests -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -MF dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o.d -o dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -c dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/test_fast_numpy.c [113/123] cc -o dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [114/123] cc -Idipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/streamlinespeed.c [115/123] cc -o dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [116/123] cc -Idipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/crosscorr.c [117/123] cc -o dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [118/123] cc -Idipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/distances.c [119/123] cc -o dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [120/123] cc -Idipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/interpolation.c [121/123] cc -o dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [122/123] cc -Idipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.13 -I/usr/include/x86_64-linux-gnu/python3.13 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/vector_fields.c [123/123] cc -o dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [1/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/version.py [2/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so [3/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so [4/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so [5/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/parzenhist.cpython-313-x86_64-linux-gnu.so [6/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so [7/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/transforms.cpython-313-x86_64-linux-gnu.so [8/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-v4sctjms/dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so [9/545] 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[545/545] /build/reproducible-path/dipy-1.10.0~rc1/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.10.0.dev0-cp313-cp313-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.10.0~rc1 /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/x86_64-linux-gnu --native-file=/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/meson-python-native-file.ini The Meson build system Version: 1.6.0 Source dir: /build/reproducible-path/dipy-1.10.0~rc1 Build dir: /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1 Build type: native build Project name: dipy Project version: 1.10.0.dev0 C compiler for the host machine: cc (gcc 14.2.0 "cc (Debian 14.2.0-8) 14.2.0") C linker for the host machine: cc ld.bfd 2.43.1 C++ compiler for the host machine: c++ (gcc 14.2.0 "c++ (Debian 14.2.0-8) 14.2.0") C++ linker for the host machine: c++ ld.bfd 2.43.1 Cython compiler for the host machine: cython (cython 3.0.11) Host machine cpu family: x86_64 Host machine cpu: x86_64 Program python found: YES (/usr/bin/python3.12) Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1 Run-time dependency python found: YES 3.12 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: YES Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 45 dipy 1.10.0.dev0 User defined options Native files : /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/meson-python-native-file.ini b_ndebug : if-release b_vscrt : md buildtype : release libdir : lib/x86_64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload Found ninja-1.12.1 at /usr/bin/ninja Generating targets: 0%| | 0/45 eta ? Generating targets: 42%|████▏ | 19/45 eta 00:00 Generating targets: 84%|████████▍ | 38/45 eta 00:00 Writing build.ninja: 0%| | 0/188 eta ? + /usr/bin/ninja --verbose [1/123] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [2/123] /usr/bin/python3 '/build/reproducible-path/dipy-1.10.0~rc1/dipy/../tools/gitversion.py' --meson-dist --write dipy/version.py [3/123] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [4/123] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [5/123] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [6/123] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [7/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/shift_twist_convolution.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/denoise/shift_twist_convolution.pyx [8/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/direction/probabilistic_direction_getter.pyx [9/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/pca_noise_estimate.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/denoise/pca_noise_estimate.pyx [10/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/quick_squash.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/reconst/quick_squash.pyx [11/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/vec_val_sum.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/reconst/vec_val_sum.pyx [12/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/bundlemin.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/bundlemin.pyx [13/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/ptt_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/direction/ptt_direction_getter.pyx [14/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/recspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/reconst/recspeed.pyx [15/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/eudx_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/reconst/eudx_direction_getter.pyx [16/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/expectmax.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/expectmax.pyx [17/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/enhancement_kernel.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/denoise/enhancement_kernel.pyx [18/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/direction/closest_peak_direction_getter.pyx [19/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/pmf.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/direction/pmf.pyx [20/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/direction/bootstrap_direction_getter.pyx [21/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/nlmeans_block.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/denoise/nlmeans_block.pyx [22/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/transforms.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/transforms.pyx [23/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/denspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/denoise/denspeed.pyx [24/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/interpolation.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/core/interpolation.pyx [25/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/crosscorr.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/crosscorr.pyx [26/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/parzenhist.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/parzenhist.pyx [27/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/clustering_algorithms.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/clustering_algorithms.pyx [28/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/omp.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/utils/omp.pyx [29/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/sumsqdiff.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/sumsqdiff.pyx [30/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/mrf.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/mrf.pyx [31/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/fast_numpy.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/utils/fast_numpy.pyx [32/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/localtrack.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/localtrack.pyx [33/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/distances.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/distances.pyx [34/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/featurespeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/featurespeed.pyx [35/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/stopping_criterion.pyx [36/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/fbcmeasures.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/fbcmeasures.pyx [37/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/cythonutils.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/cythonutils.pyx [38/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/clusteringspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/clusteringspeed.pyx [39/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/metricspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/segment/metricspeed.pyx [40/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/propspeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/propspeed.pyx [41/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/direction_getter.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/direction_getter.pyx [42/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/vox2track.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/vox2track.pyx [43/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/streamlinespeed.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/tracking/streamlinespeed.pyx [44/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/test_fast_numpy.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/utils/tests/test_fast_numpy.pyx [45/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/vector_fields.c --include-dir '/build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy' ../dipy/align/vector_fields.pyx [46/123] cc -Idipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -MF dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o.d -o dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -c dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c [47/123] cc -Idipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/shift_twist_convolution.c [48/123] cc -Idipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -MF dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o.d -o dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -c dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/eudx_direction_getter.c [49/123] cc -Idipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -MF dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/quick_squash.c [50/123] cc -Idipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/denspeed.c [51/123] cc -Idipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/bundlemin.c [52/123] cc -Idipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/vec_val_sum.c [53/123] cc -Idipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/transforms.c [54/123] cc -Idipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -MF dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o.d -o dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -c dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/pmf.c [55/123] cc -Idipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/enhancement_kernel.c [56/123] cc -Idipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -MF dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o.d -o dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -c dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/ptt_direction_getter.c [57/123] cc -Idipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/nlmeans_block.c [58/123] cc -Idipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c [59/123] cc -Idipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/pca_noise_estimate.c [60/123] cc -Idipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c [61/123] cc -Idipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/fast_numpy.c dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/fast_numpy.c:5153:13: warning: '__pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer' defined but not used [-Wunused-function] 5153 | static void __pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer(double *__pyx_v_arr, int __pyx_v_size) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [62/123] cc -Idipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/cythonutils.c [63/123] cc -Idipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/omp.c [64/123] cc -o dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [65/123] cc -o dipy/align/transforms.cpython-312-x86_64-linux-gnu.so dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [66/123] cc -o dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [67/123] cc -o dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [68/123] cc -o dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [69/123] cc -o dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [70/123] cc -o dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [71/123] cc -Idipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/recspeed.c [72/123] cc -o dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [73/123] cc -o dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [74/123] cc -o dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [75/123] cc -o dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [76/123] cc -o dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [77/123] cc -o dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [78/123] cc -o dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [79/123] cc -o dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/123] cc -o dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong 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'-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/clustering_algorithms.c [85/123] cc -o dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [86/123] cc -Idipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/parzenhist.c [87/123] cc -o dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [88/123] cc -Idipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -MF dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o.d -o dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -c dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/direction_getter.c [89/123] cc -o dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [90/123] cc -Idipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/propspeed.c [91/123] cc -o dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [92/123] cc -Idipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/clusteringspeed.c [93/123] cc -o dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [94/123] cc -Idipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/localtrack.c [95/123] cc -o dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [96/123] cc -Idipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/mrf.c [97/123] cc -o dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [98/123] cc -Idipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/expectmax.c [99/123] cc -Idipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/metricspeed.c [100/123] cc -o dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [101/123] cc -o dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [102/123] cc -Idipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/crosscorr.c [103/123] cc -Idipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/vox2track.c [104/123] cc -o dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [105/123] cc -o dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [106/123] cc -Idipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/featurespeed.c [107/123] cc -o dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [108/123] cc -Idipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/fbcmeasures.c [109/123] cc -o dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [110/123] cc -Idipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/sumsqdiff.c [111/123] cc -o dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [112/123] cc -Idipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.12/Python.h:26, from dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:29891:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:29865:10: note: '*(long unsigned int *)(&__pyx_t_1[0])' was declared here 29865 | double __pyx_t_1[1]; | ^~~~~~~~~ [113/123] cc -o dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [114/123] cc -Idipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p -Idipy/utils/tests -I../dipy/utils/tests -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -MF dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o.d -o dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -c dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/test_fast_numpy.c [115/123] cc -o dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [116/123] cc -Idipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/streamlinespeed.c [117/123] cc -o dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [118/123] cc -Idipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/distances.c [119/123] cc -o dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [120/123] cc -Idipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/interpolation.c [121/123] cc -o dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [122/123] cc -Idipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -I/usr/include/x86_64-linux-gnu/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/vector_fields.c [123/123] cc -o dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration '-ffile-prefix-map=/build/reproducible-path/dipy-1.10.0~rc1=.' -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [1/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/version.py [2/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so [3/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so [4/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so [5/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so [6/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so [7/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so [8/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so [9/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so [10/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so [11/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so [12/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so [13/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so [14/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so [15/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so [16/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so [17/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so [18/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so [19/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so [20/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so [21/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so [22/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so [23/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so [24/545] /build/reproducible-path/dipy-1.10.0~rc1/.mesonpy-yqzuvrc1/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so [25/545] 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./dipy/data/files/func_coef.nii.gz make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd '/build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.13_dipy/build'; python3.13 -m pytest -k 'not dipy/utils/tests/test_tractogram.py and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_spike and not test_normalization and not test_kernel_input and not test_fbc and not test_concatenate and not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' --pyargs dipy ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.13_dipy/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 1036 items / 9 deselected / 1027 selected dipy/align/tests/test_api.py ssssssss [ 0%] dipy/align/tests/test_crosscorr.py .... [ 1%] dipy/align/tests/test_expectmax.py ...... [ 1%] dipy/align/tests/test_imaffine.py ........ [ 2%] dipy/align/tests/test_imwarp.py ................. [ 4%] dipy/align/tests/test_metrics.py .... [ 4%] dipy/align/tests/test_parzenhist.py ........ [ 5%] dipy/align/tests/test_reslice.py . [ 5%] dipy/align/tests/test_scalespace.py .. [ 5%] dipy/align/tests/test_streamlinear.py ..................... [ 7%] dipy/align/tests/test_streamwarp.py .... [ 8%] dipy/align/tests/test_sumsqdiff.py ........ [ 8%] dipy/align/tests/test_transforms.py ...... [ 9%] dipy/align/tests/test_vector_fields.py ......................... [ 11%] dipy/align/tests/test_whole_brain_slr.py .. [ 12%] dipy/core/tests/test_geometry.py ................ [ 13%] dipy/core/tests/test_gradients.py ........................... [ 16%] dipy/core/tests/test_graph.py . [ 16%] dipy/core/tests/test_interpolation.py ............ [ 17%] dipy/core/tests/test_ndindex.py .. [ 17%] dipy/core/tests/test_optimize.py ..... [ 18%] dipy/core/tests/test_rng.py ... [ 18%] dipy/core/tests/test_sphere.py .......s.ss..s.ss..... [ 20%] dipy/core/tests/test_subdivide_octahedron.py . [ 20%] dipy/data/tests/test_data.py . [ 20%] dipy/data/tests/test_fetcher.py ..s [ 21%] dipy/denoise/tests/test_ascm.py ..... [ 21%] dipy/denoise/tests/test_denoise.py . [ 21%] dipy/denoise/tests/test_gibbs.py ........... [ 22%] dipy/denoise/tests/test_kernel.py . [ 22%] dipy/denoise/tests/test_lpca.py ................... [ 24%] dipy/denoise/tests/test_nlmeans.py ........ [ 25%] dipy/denoise/tests/test_noise_estimate.py ..... [ 25%] dipy/denoise/tests/test_non_local_means.py ......... [ 26%] dipy/denoise/tests/test_patch2self.py ..... [ 27%] dipy/direction/tests/test_bootstrap_direction_getter.py .... [ 27%] dipy/direction/tests/test_peaks.py ........... [ 28%] dipy/direction/tests/test_pmf.py ... [ 29%] dipy/direction/tests/test_prob_direction_getter.py .. [ 29%] dipy/direction/tests/test_ptt_direction_getter.py s. [ 29%] dipy/io/tests/test_dpy.py . [ 29%] dipy/io/tests/test_io.py . [ 29%] dipy/io/tests/test_io_gradients.py . [ 29%] dipy/io/tests/test_io_peaks.py ..... [ 30%] dipy/io/tests/test_stateful_tractogram.py ssssssssssssssssssssssssssssss [ 33%] sssssssssssssssssssssssssssssssssssssssss [ 37%] dipy/io/tests/test_streamline.py sssssssss [ 38%] dipy/io/tests/test_utils.py ssssssss [ 38%] dipy/nn/tests/test_cnn_1denoiser.py ss [ 39%] dipy/nn/tests/test_deepn4.py ss [ 39%] dipy/nn/tests/test_evac.py sss [ 39%] dipy/nn/tests/test_histo_resdnn.py ssss [ 39%] dipy/nn/tests/test_synb0.py ss [ 40%] dipy/nn/tests/test_tf.py sss [ 40%] dipy/nn/tests/test_utils.py .. [ 40%] dipy/reconst/tests/test_bingham.py .... [ 40%] dipy/reconst/tests/test_cache.py . [ 41%] dipy/reconst/tests/test_cross_validation.py .... [ 41%] dipy/reconst/tests/test_csdeconv.py ................ [ 43%] dipy/reconst/tests/test_cti.py ..... [ 43%] dipy/reconst/tests/test_dki.py .................. [ 45%] dipy/reconst/tests/test_dki_micro.py s..... [ 45%] dipy/reconst/tests/test_dsi.py ... [ 46%] dipy/reconst/tests/test_dsi_deconv.py .. [ 46%] dipy/reconst/tests/test_dsi_metrics.py . [ 46%] dipy/reconst/tests/test_dti.py ............................. [ 49%] dipy/reconst/tests/test_eudx_dg.py . [ 49%] dipy/reconst/tests/test_forecast.py s..... [ 49%] dipy/reconst/tests/test_fwdti.py ........... [ 51%] dipy/reconst/tests/test_gqi.py .. [ 51%] dipy/reconst/tests/test_ivim.py ......................sss [ 53%] dipy/reconst/tests/test_mapmri.py .................ss.. [ 55%] dipy/reconst/tests/test_mcsd.py ssss..... [ 56%] dipy/reconst/tests/test_msdki.py ........ [ 57%] dipy/reconst/tests/test_multi_voxel.py ... [ 57%] dipy/reconst/tests/test_odf.py ... [ 57%] dipy/reconst/tests/test_peak_finding.py ... [ 58%] dipy/reconst/tests/test_qtdmri.py .........ssssssss. [ 59%] dipy/reconst/tests/test_qti.py ............. [ 61%] dipy/reconst/tests/test_reco_utils.py .. [ 61%] dipy/reconst/tests/test_rumba.py ........ [ 62%] dipy/reconst/tests/test_sfm.py ....... [ 62%] dipy/reconst/tests/test_shm.py ....................................... [ 66%] dipy/reconst/tests/test_shore.py .s.s [ 67%] dipy/reconst/tests/test_shore_metrics.py . [ 67%] dipy/reconst/tests/test_shore_odf.py .. [ 67%] dipy/reconst/tests/test_utils.py ... [ 67%] dipy/reconst/tests/test_vec_val_vect.py .. [ 67%] dipy/reconst/tests/test_weights_method.py .. [ 68%] dipy/segment/tests/test_adjustment.py . [ 68%] dipy/segment/tests/test_bundles.py ....... [ 68%] dipy/segment/tests/test_clustering.py ............................ [ 71%] dipy/segment/tests/test_feature.py ......... [ 72%] dipy/segment/tests/test_fss.py ....... [ 73%] dipy/segment/tests/test_mask.py ... [ 73%] dipy/segment/tests/test_metric.py ..... [ 73%] dipy/segment/tests/test_mrf.py ..... [ 74%] dipy/segment/tests/test_qbx.py ....... [ 75%] dipy/segment/tests/test_quickbundles.py ........ [ 75%] dipy/segment/tests/test_tissue.py .... [ 76%] dipy/segment/tests/test_utils.py .. [ 76%] dipy/sims/tests/test_phantom.py .. [ 76%] dipy/sims/tests/test_voxel.py ........... [ 77%] dipy/stats/tests/test_analysis.py .. [ 77%] dipy/stats/tests/test_qc.py . [ 77%] dipy/stats/tests/test_resampling.py .. [ 78%] dipy/stats/tests/test_sketching.py .... [ 78%] dipy/testing/tests/test_decorators.py .. [ 78%] dipy/testing/tests/test_memory.py . [ 78%] dipy/testing/tests/test_testing.py .. [ 79%] dipy/tracking/tests/test_distances.py ........... [ 80%] dipy/tracking/tests/test_learning.py . [ 80%] dipy/tracking/tests/test_life.py ....... [ 80%] dipy/tracking/tests/test_mesh.py ... [ 81%] dipy/tracking/tests/test_metrics.py ...... [ 81%] dipy/tracking/tests/test_propagation.py .. [ 81%] dipy/tracking/tests/test_stopping_criterion.py .... [ 82%] dipy/tracking/tests/test_streamline.py .................... [ 84%] dipy/tracking/tests/test_track_volumes.py . [ 84%] dipy/tracking/tests/test_tracking.py ............ [ 85%] dipy/tracking/tests/test_utils.py .................... [ 87%] dipy/utils/tests/test_arrfuncs.py .. [ 87%] dipy/utils/tests/test_convert.py . [ 87%] dipy/utils/tests/test_deprecator.py ......... [ 88%] dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so ....... [ 89%] [ 89%] dipy/utils/tests/test_multiproc.py . [ 89%] dipy/utils/tests/test_omp.py .s. [ 89%] dipy/utils/tests/test_optpkg.py . [ 89%] dipy/utils/tests/test_parallel.py .. [ 90%] dipy/utils/tests/test_tripwire.py .. [ 90%] dipy/utils/tests/test_volume.py . [ 90%] dipy/viz/horizon/tab/tests/test_base.py sssss [ 90%] dipy/viz/tests/test_apps.py sssss. [ 91%] dipy/viz/tests/test_fury.py sssss [ 91%] dipy/viz/tests/test_regtools.py . [ 92%] dipy/viz/tests/test_streamline.py sss [ 92%] dipy/viz/tests/test_util.py ..... [ 92%] dipy/workflows/tests/test_align.py ........ [ 93%] dipy/workflows/tests/test_denoise.py ..... [ 94%] dipy/workflows/tests/test_docstring_parser.py ................. [ 95%] dipy/workflows/tests/test_iap.py ...... [ 96%] dipy/workflows/tests/test_io.py s....... [ 97%] dipy/workflows/tests/test_masking.py . [ 97%] dipy/workflows/tests/test_nn.py s [ 97%] dipy/workflows/tests/test_reconst_csa_csd.py .. [ 97%] dipy/workflows/tests/test_reconst_dki.py . [ 97%] dipy/workflows/tests/test_reconst_dsi.py . [ 97%] dipy/workflows/tests/test_reconst_dti.py ... [ 97%] dipy/workflows/tests/test_reconst_ivim.py . [ 98%] dipy/workflows/tests/test_reconst_mapmri.py ..ss [ 98%] dipy/workflows/tests/test_reconst_rumba.py . [ 98%] dipy/workflows/tests/test_segment.py .. [ 98%] dipy/workflows/tests/test_stats.py .ssss [ 99%] dipy/workflows/tests/test_tracking.py .. [ 99%] dipy/workflows/tests/test_utils.py . [ 99%] dipy/workflows/tests/test_viz.py s [ 99%] dipy/workflows/tests/test_workflow.py .... [100%] =============================== warnings summary =============================== dipy/reconst/tests/test_multi_voxel.py: 21 warnings /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: This process (pid=838399) is multi-threaded, use of fork() may lead to deadlocks in the child. pid = os.fork() -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 858 passed, 169 skipped, 9 deselected, 21 warnings in 6501.30s (1:48:21) === I: pybuild base:311: cd '/build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build'; python3.12 -m pytest -k 'not dipy/utils/tests/test_tractogram.py and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_spike and not test_normalization and not test_kernel_input and not test_fbc and not test_concatenate and not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' --pyargs dipy ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 1036 items / 9 deselected / 1027 selected dipy/align/tests/test_api.py ssssssss [ 0%] dipy/align/tests/test_crosscorr.py .... [ 1%] dipy/align/tests/test_expectmax.py ...... [ 1%] dipy/align/tests/test_imaffine.py ........ [ 2%] dipy/align/tests/test_imwarp.py ................. [ 4%] dipy/align/tests/test_metrics.py .... [ 4%] dipy/align/tests/test_parzenhist.py ........ [ 5%] dipy/align/tests/test_reslice.py . [ 5%] dipy/align/tests/test_scalespace.py .. [ 5%] dipy/align/tests/test_streamlinear.py ..................... [ 7%] dipy/align/tests/test_streamwarp.py .... [ 8%] dipy/align/tests/test_sumsqdiff.py ........ [ 8%] dipy/align/tests/test_transforms.py ...... [ 9%] dipy/align/tests/test_vector_fields.py ......................... [ 11%] dipy/align/tests/test_whole_brain_slr.py .. [ 12%] dipy/core/tests/test_geometry.py ................ [ 13%] dipy/core/tests/test_gradients.py ........................... [ 16%] dipy/core/tests/test_graph.py . [ 16%] dipy/core/tests/test_interpolation.py ............ [ 17%] dipy/core/tests/test_ndindex.py .. [ 17%] dipy/core/tests/test_optimize.py ..... [ 18%] dipy/core/tests/test_rng.py ... [ 18%] dipy/core/tests/test_sphere.py .......s.ss..s.ss..... [ 20%] dipy/core/tests/test_subdivide_octahedron.py . [ 20%] dipy/data/tests/test_data.py . [ 20%] dipy/data/tests/test_fetcher.py ..s [ 21%] dipy/denoise/tests/test_ascm.py ..... [ 21%] dipy/denoise/tests/test_denoise.py . [ 21%] dipy/denoise/tests/test_gibbs.py ........... [ 22%] dipy/denoise/tests/test_kernel.py . [ 22%] dipy/denoise/tests/test_lpca.py ................... [ 24%] dipy/denoise/tests/test_nlmeans.py ........ [ 25%] dipy/denoise/tests/test_noise_estimate.py ..... [ 25%] dipy/denoise/tests/test_non_local_means.py ......... [ 26%] dipy/denoise/tests/test_patch2self.py ..... [ 27%] dipy/direction/tests/test_bootstrap_direction_getter.py .... [ 27%] dipy/direction/tests/test_peaks.py ........... [ 28%] dipy/direction/tests/test_pmf.py ... [ 29%] dipy/direction/tests/test_prob_direction_getter.py .. [ 29%] dipy/direction/tests/test_ptt_direction_getter.py s. [ 29%] dipy/io/tests/test_dpy.py . [ 29%] dipy/io/tests/test_io.py . [ 29%] dipy/io/tests/test_io_gradients.py . [ 29%] dipy/io/tests/test_io_peaks.py ..... [ 30%] dipy/io/tests/test_stateful_tractogram.py ssssssssssssssssssssssssssssss [ 33%] sssssssssssssssssssssssssssssssssssssssss [ 37%] dipy/io/tests/test_streamline.py sssssssss [ 38%] dipy/io/tests/test_utils.py ssssssss [ 38%] dipy/nn/tests/test_cnn_1denoiser.py ss [ 39%] dipy/nn/tests/test_deepn4.py ss [ 39%] dipy/nn/tests/test_evac.py sss [ 39%] dipy/nn/tests/test_histo_resdnn.py ssss [ 39%] dipy/nn/tests/test_synb0.py ss [ 40%] dipy/nn/tests/test_tf.py sss [ 40%] dipy/nn/tests/test_utils.py .. [ 40%] dipy/reconst/tests/test_bingham.py .... [ 40%] dipy/reconst/tests/test_cache.py . [ 41%] dipy/reconst/tests/test_cross_validation.py .... [ 41%] dipy/reconst/tests/test_csdeconv.py ................ [ 43%] dipy/reconst/tests/test_cti.py ..... [ 43%] dipy/reconst/tests/test_dki.py .................. [ 45%] dipy/reconst/tests/test_dki_micro.py s..... [ 45%] dipy/reconst/tests/test_dsi.py ... [ 46%] dipy/reconst/tests/test_dsi_deconv.py .. [ 46%] dipy/reconst/tests/test_dsi_metrics.py . [ 46%] dipy/reconst/tests/test_dti.py ............................. [ 49%] dipy/reconst/tests/test_eudx_dg.py . [ 49%] dipy/reconst/tests/test_forecast.py s..... [ 49%] dipy/reconst/tests/test_fwdti.py ........... [ 51%] dipy/reconst/tests/test_gqi.py .. [ 51%] dipy/reconst/tests/test_ivim.py ......................sss [ 53%] dipy/reconst/tests/test_mapmri.py .................ss.. [ 55%] dipy/reconst/tests/test_mcsd.py ssss..... [ 56%] dipy/reconst/tests/test_msdki.py ........ [ 57%] dipy/reconst/tests/test_multi_voxel.py ... [ 57%] dipy/reconst/tests/test_odf.py ... [ 57%] dipy/reconst/tests/test_peak_finding.py ... [ 58%] dipy/reconst/tests/test_qtdmri.py .........ssssssss. [ 59%] dipy/reconst/tests/test_qti.py ............. [ 61%] dipy/reconst/tests/test_reco_utils.py .. [ 61%] dipy/reconst/tests/test_rumba.py ........ [ 62%] dipy/reconst/tests/test_sfm.py ....... [ 62%] dipy/reconst/tests/test_shm.py ....................................... [ 66%] dipy/reconst/tests/test_shore.py .s.s [ 67%] dipy/reconst/tests/test_shore_metrics.py . [ 67%] dipy/reconst/tests/test_shore_odf.py .. [ 67%] dipy/reconst/tests/test_utils.py ... [ 67%] dipy/reconst/tests/test_vec_val_vect.py .. [ 67%] dipy/reconst/tests/test_weights_method.py .. [ 68%] dipy/segment/tests/test_adjustment.py . [ 68%] dipy/segment/tests/test_bundles.py ....... [ 68%] dipy/segment/tests/test_clustering.py ............................ [ 71%] dipy/segment/tests/test_feature.py ......... [ 72%] dipy/segment/tests/test_fss.py ....... [ 73%] dipy/segment/tests/test_mask.py ... [ 73%] dipy/segment/tests/test_metric.py ..... [ 73%] dipy/segment/tests/test_mrf.py ..... [ 74%] dipy/segment/tests/test_qbx.py ....... [ 75%] dipy/segment/tests/test_quickbundles.py ........ [ 75%] dipy/segment/tests/test_tissue.py .... [ 76%] dipy/segment/tests/test_utils.py .. [ 76%] dipy/sims/tests/test_phantom.py .. [ 76%] dipy/sims/tests/test_voxel.py ........... [ 77%] dipy/stats/tests/test_analysis.py .. [ 77%] dipy/stats/tests/test_qc.py . [ 77%] dipy/stats/tests/test_resampling.py .. [ 78%] dipy/stats/tests/test_sketching.py .... [ 78%] dipy/testing/tests/test_decorators.py .. [ 78%] dipy/testing/tests/test_memory.py . [ 78%] dipy/testing/tests/test_testing.py .. [ 79%] dipy/tracking/tests/test_distances.py ........... [ 80%] dipy/tracking/tests/test_learning.py . [ 80%] dipy/tracking/tests/test_life.py ....... [ 80%] dipy/tracking/tests/test_mesh.py ... [ 81%] dipy/tracking/tests/test_metrics.py ...... [ 81%] dipy/tracking/tests/test_propagation.py .. [ 81%] dipy/tracking/tests/test_stopping_criterion.py .... [ 82%] dipy/tracking/tests/test_streamline.py .................... [ 84%] dipy/tracking/tests/test_track_volumes.py . [ 84%] dipy/tracking/tests/test_tracking.py ............ [ 85%] dipy/tracking/tests/test_utils.py .................... [ 87%] dipy/utils/tests/test_arrfuncs.py .. [ 87%] dipy/utils/tests/test_convert.py . [ 87%] dipy/utils/tests/test_deprecator.py ......... [ 88%] dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so ....... [ 89%] [ 89%] dipy/utils/tests/test_multiproc.py . [ 89%] dipy/utils/tests/test_omp.py .s. [ 89%] dipy/utils/tests/test_optpkg.py . [ 89%] dipy/utils/tests/test_parallel.py .. [ 90%] dipy/utils/tests/test_tripwire.py .. [ 90%] dipy/utils/tests/test_volume.py . [ 90%] dipy/viz/horizon/tab/tests/test_base.py sssss [ 90%] dipy/viz/tests/test_apps.py sssss. [ 91%] dipy/viz/tests/test_fury.py sssss [ 91%] dipy/viz/tests/test_regtools.py . [ 92%] dipy/viz/tests/test_streamline.py sss [ 92%] dipy/viz/tests/test_util.py ..... [ 92%] dipy/workflows/tests/test_align.py ........ [ 93%] dipy/workflows/tests/test_denoise.py ..... [ 94%] dipy/workflows/tests/test_docstring_parser.py ................. [ 95%] dipy/workflows/tests/test_iap.py ...... [ 96%] dipy/workflows/tests/test_io.py s....... [ 97%] dipy/workflows/tests/test_masking.py . [ 97%] dipy/workflows/tests/test_nn.py s [ 97%] dipy/workflows/tests/test_reconst_csa_csd.py .. [ 97%] dipy/workflows/tests/test_reconst_dki.py . [ 97%] dipy/workflows/tests/test_reconst_dsi.py . [ 97%] dipy/workflows/tests/test_reconst_dti.py ... [ 97%] dipy/workflows/tests/test_reconst_ivim.py . [ 98%] dipy/workflows/tests/test_reconst_mapmri.py ..ss [ 98%] dipy/workflows/tests/test_reconst_rumba.py . [ 98%] dipy/workflows/tests/test_segment.py .. [ 98%] dipy/workflows/tests/test_stats.py .ssss [ 99%] dipy/workflows/tests/test_tracking.py .. [ 99%] dipy/workflows/tests/test_utils.py . [ 99%] dipy/workflows/tests/test_viz.py s [ 99%] dipy/workflows/tests/test_workflow.py .... [100%] =============================== warnings summary =============================== dipy/reconst/tests/test_multi_voxel.py: 21 warnings /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: This process (pid=1695339) is multi-threaded, use of fork() may lead to deadlocks in the child. pid = os.fork() -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 858 passed, 169 skipped, 9 deselected, 21 warnings in 6525.79s (1:48:45) === create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' # Prune duplicate LICENSE file find debian/ -name LICENSE -delete # Only now lets build docs cd doc/ \ && PYTHONPATH=/build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build \ /usr/bin/make html SPHINXOPTS="-D today=\"November 21, 2024\"" make[2]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1/doc' tools/build_modref_templates.py dipy reference /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ from dipy.viz.plotting import bundle_shape_profile WARNING:root:This model requires Pytorch. Please install these packages using pip. WARNING:root:This model requires Pytorch. Please install these packages using pip. WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for dipy: -> dipy Generating docs for dipy.align: -> dipy.align -> dipy.align._public -> dipy.align.cpd -> dipy.align.imaffine -> dipy.align.imwarp -> dipy.align.metrics -> dipy.align.reslice -> dipy.align.scalespace -> dipy.align.streamlinear -> dipy.align.streamwarp Generating docs for dipy.core: -> dipy.core WARNING: Empty - dipy.core -> dipy.core.geometry -> dipy.core.gradients -> dipy.core.graph -> dipy.core.histeq -> dipy.core.ndindex -> dipy.core.onetime -> dipy.core.optimize -> dipy.core.profile -> dipy.core.rng -> dipy.core.sphere -> dipy.core.sphere_stats -> dipy.core.subdivide_octahedron -> dipy.core.wavelet Generating docs for dipy.data: -> dipy.data -> dipy.data.fetcher Generating docs for dipy.denoise: -> dipy.denoise WARNING: Empty - dipy.denoise -> dipy.denoise.adaptive_soft_matching -> dipy.denoise.gibbs -> dipy.denoise.localpca -> dipy.denoise.nlmeans -> dipy.denoise.noise_estimate -> dipy.denoise.non_local_means -> dipy.denoise.patch2self Generating docs for dipy.direction: -> dipy.direction WARNING: Empty - dipy.direction -> dipy.direction.peaks Generating docs for dipy.io: -> dipy.io WARNING: Empty - dipy.io -> dipy.io.dpy -> dipy.io.gradients -> dipy.io.image -> dipy.io.peaks -> dipy.io.pickles -> dipy.io.stateful_tractogram -> dipy.io.streamline -> dipy.io.surface -> dipy.io.utils -> dipy.io.vtk Generating docs for dipy.nn: -> dipy.nn WARNING: Empty - dipy.nn -> dipy.nn.tf WARNING: Empty - dipy.nn.tf -> dipy.nn.tf.cnn_1d_denoising -> dipy.nn.tf.deepn4 -> dipy.nn.tf.evac -> dipy.nn.tf.histo_resdnn -> dipy.nn.tf.model -> dipy.nn.tf.synb0 -> dipy.nn.torch WARNING: Empty - dipy.nn.torch -> dipy.nn.torch.evac -> dipy.nn.torch.histo_resdnn -> dipy.nn.utils Generating docs for dipy.reconst: -> dipy.reconst WARNING: Empty - dipy.reconst -> dipy.reconst.base -> dipy.reconst.bingham -> dipy.reconst.cache -> dipy.reconst.cross_validation -> dipy.reconst.csdeconv -> dipy.reconst.cti -> dipy.reconst.dki -> dipy.reconst.dki_micro -> dipy.reconst.dsi -> dipy.reconst.dti -> dipy.reconst.forecast -> dipy.reconst.fwdti -> dipy.reconst.gqi -> dipy.reconst.ivim -> dipy.reconst.mapmri -> dipy.reconst.mcsd -> dipy.reconst.msdki -> dipy.reconst.multi_voxel -> dipy.reconst.odf -> dipy.reconst.qtdmri -> dipy.reconst.qti -> dipy.reconst.rumba -> dipy.reconst.sfm -> dipy.reconst.shm -> dipy.reconst.shore -> dipy.reconst.utils -> dipy.reconst.weights_method Generating docs for dipy.segment: -> dipy.segment WARNING: Empty - dipy.segment -> dipy.segment.bundles -> dipy.segment.clustering -> dipy.segment.fss -> dipy.segment.mask -> dipy.segment.metric -> dipy.segment.threshold -> dipy.segment.tissue -> dipy.segment.utils Generating docs for dipy.sims: -> dipy.sims WARNING: Empty - dipy.sims -> dipy.sims.phantom -> dipy.sims.voxel Generating docs for dipy.stats: -> dipy.stats WARNING: Empty - dipy.stats -> dipy.stats.analysis -> dipy.stats.qc -> dipy.stats.sketching Generating docs for dipy.tracking: -> dipy.tracking WARNING: Empty - dipy.tracking -> dipy.tracking._utils WARNING: Empty - dipy.tracking._utils -> dipy.tracking.learning -> dipy.tracking.life -> dipy.tracking.local_tracking -> dipy.tracking.mesh -> dipy.tracking.metrics -> dipy.tracking.streamline -> dipy.tracking.utils Generating docs for dipy.version: -> dipy.version WARNING: Empty - dipy.version Generating docs for dipy.viz: -> dipy.viz WARNING: Empty - dipy.viz -> dipy.viz.gmem -> dipy.viz.horizon WARNING: Empty - dipy.viz.horizon -> dipy.viz.horizon.app -> dipy.viz.horizon.tab WARNING: Empty - dipy.viz.horizon.tab -> dipy.viz.horizon.tab.base -> dipy.viz.horizon.tab.cluster -> dipy.viz.horizon.tab.peak -> dipy.viz.horizon.tab.roi -> dipy.viz.horizon.tab.slice -> dipy.viz.horizon.tab.surface -> dipy.viz.horizon.util -> dipy.viz.horizon.visualizer WARNING: Empty - dipy.viz.horizon.visualizer -> dipy.viz.horizon.visualizer.cluster -> dipy.viz.horizon.visualizer.peak -> dipy.viz.horizon.visualizer.slice -> dipy.viz.horizon.visualizer.surface -> dipy.viz.panel -> dipy.viz.plotting -> dipy.viz.projections -> dipy.viz.regtools -> dipy.viz.streamline Generating docs for dipy.workflows: -> dipy.workflows WARNING: Empty - dipy.workflows -> dipy.workflows.align -> dipy.workflows.base -> dipy.workflows.cli -> dipy.workflows.combined_workflow -> dipy.workflows.denoise -> dipy.workflows.docstring_parser -> dipy.workflows.flow_runner -> dipy.workflows.io -> dipy.workflows.mask -> dipy.workflows.multi_io -> dipy.workflows.nn -> dipy.workflows.reconst -> dipy.workflows.segment -> dipy.workflows.stats -> dipy.workflows.tracking -> dipy.workflows.utils -> dipy.workflows.viz -> dipy.workflows.workflow 16 files written tools/docgen_cmd.py dipy reference_cmd /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ from dipy.viz.plotting import bundle_shape_profile WARNING:root:This model requires Pytorch. Please install these packages using pip. WARNING:root:This model requires Pytorch. Please install these packages using pip. Generating docs for: dipy_align_affine (ImageRegistrationFlow) Done Generating docs for: dipy_align_syn (SynRegistrationFlow) Done Generating docs for: dipy_apply_transform (ApplyTransformFlow) Done Generating docs for: dipy_buan_lmm (LinearMixedModelsFlow) Done Generating docs for: dipy_buan_shapes (BundleShapeAnalysis) Done Generating docs for: dipy_buan_profiles (BundleAnalysisTractometryFlow) Done Generating docs for: dipy_bundlewarp (BundleWarpFlow) Done Generating docs for: dipy_correct_motion (MotionCorrectionFlow) Done Generating docs for: dipy_concatenate_tractograms (ConcatenateTractogramFlow) Done Generating docs for: dipy_convert_tractogram (ConvertTractogramFlow) Done Generating docs for: dipy_convert_tensors (ConvertTensorsFlow) Done Generating docs for: dipy_denoise_nlmeans (NLMeansFlow) Done Generating docs for: dipy_denoise_lpca (LPCAFlow) Done Generating docs for: dipy_denoise_mppca (MPPCAFlow) Done Generating docs for: dipy_denoise_patch2self (Patch2SelfFlow) Done Generating docs for: dipy_evac_plus (EVACPlusFlow) Done Generating docs for: dipy_fetch (FetchFlow) Done Generating docs for: dipy_fit_csa (ReconstCSAFlow) Done Generating docs for: dipy_fit_csd (ReconstCSDFlow) Done Generating docs for: dipy_fit_dki (ReconstDkiFlow) Done Generating docs for: dipy_fit_dti (ReconstDtiFlow) Done Generating docs for: dipy_fit_dsi (ReconstDsiFlow) Done Generating docs for: dipy_fit_ivim (ReconstIvimFlow) Done Generating docs for: dipy_fit_mapmri (ReconstMAPMRIFlow) Done Generating docs for: dipy_gibbs_ringing (GibbsRingingFlow) Done Generating docs for: dipy_horizon (HorizonFlow) Done Generating docs for: dipy_info (IoInfoFlow) Done Generating docs for: dipy_labelsbundles (LabelsBundlesFlow) Done Generating docs for: dipy_mask (MaskFlow) Done Generating docs for: dipy_median_otsu (MedianOtsuFlow) Done Generating docs for: dipy_nifti2pam (NiftisToPamFlow) Done Generating docs for: dipy_pam2nifti (PamToNiftisFlow) Done Generating docs for: dipy_recobundles (RecoBundlesFlow) Done Generating docs for: dipy_reslice (ResliceFlow) Done Generating docs for: dipy_sh_convert_mrtrix (ConvertSHFlow) Done Generating docs for: dipy_slr (SlrWithQbxFlow) Done Generating docs for: dipy_snr_in_cc (SNRinCCFlow) Done Generating docs for: dipy_split (SplitFlow) Done Generating docs for: dipy_tensor2pam (TensorToPamFlow) Done Generating docs for: dipy_track (LocalFiberTrackingPAMFlow) Done Generating docs for: dipy_track_pft (PFTrackingPAMFlow) Done Generating index.rst Done Build API docs...done. # Standard html build after examples have been prepared sphinx-build -b html -d _build/doctrees -D today="November 21, 2024" . _build/html Running Sphinx v7.4.7 loading translations [en]... done Initializing GitHub plugin making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. checking bibtex cache... out of date parsing bibtex file /build/reproducible-path/dipy-1.10.0~rc1/doc/references.bib... parsed 221 entries [autosummary] generating autosummary for: api_changes.rst, cite.rst, devel/benchmarking.rst, devel/bibliography.rst, devel/coding_style_guideline.rst, devel/commit_codes.rst, devel/gitwash/configure_git.rst, devel/gitwash/development_workflow.rst, devel/gitwash/dot2_dot3.rst, devel/gitwash/following_latest.rst, ..., theory/spherical.rst, user_guide/bibliography.rst, user_guide/data.rst, user_guide/dataset_list.rst, user_guide/dependencies.rst, user_guide/getting_started.rst, user_guide/index.rst, user_guide/installation.rst, user_guide/introduction.rst, user_guide/mission.rst /build/reproducible-path/dipy-1.10.0~rc1/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ from dipy.viz.plotting import bundle_shape_profile WARNING:root:This model requires Pytorch. Please install these packages using pip. WARNING:root:This model requires Pytorch. Please install these packages using pip. WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv... building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 144 source files that are out of date updating environment: [new config] 144 added, 0 changed, 0 removed reading sources... [ 1%] api_changes reading sources... [ 1%] cite reading sources... [ 2%] devel/benchmarking reading sources... [ 3%] devel/bibliography reading sources... [ 3%] devel/coding_style_guideline reading sources... [ 4%] devel/commit_codes reading sources... [ 5%] devel/gitwash/configure_git reading sources... [ 6%] devel/gitwash/development_workflow reading sources... [ 6%] devel/gitwash/dot2_dot3 reading sources... [ 7%] devel/gitwash/following_latest reading sources... [ 8%] devel/gitwash/forking_hell reading sources... 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[100%] user_guide/mission /build/reproducible-path/dipy-1.10.0~rc1/doc/index.rst:31: WARNING: 'any' reference target not found: examples_built/index /build/reproducible-path/dipy-1.10.0~rc1/doc/old_highlights.rst:308: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/old_highlights.rst:311: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/old_news.rst:38: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/recipes.rst:15: WARNING: undefined label: 'sphx_glr_examples_built_file_formats_streamline_formats.py' /build/reproducible-path/dipy-1.10.0~rc1/doc/stateoftheart.rst:7: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/stateoftheart.rst:24: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/user_guide/getting_started.rst:41: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.10.0~rc1/doc/user_guide/introduction.rst:11: WARNING: undefined label: 'examples' generating indices... genindex py-modindex done highlighting module code... 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[ 40%] _static/spitfire_0.png copying images... [ 50%] _static/spitfire_x.png copying images... [ 60%] _static/spitfire_y.png copying images... [ 70%] _static/spitfire_hoped.png copying images... [ 80%] theory/spherical_coordinates.png copying images... [ 90%] _static/colorfa.png copying images... [100%] _static/pretty_tracks.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 27 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1/doc' # references to cloudflare and github are privacy breaches sed 's@https://cdnjs\.cloudflare\.com/ajax/libs/mathjax/[^/]\+/@file:///usr/share/javascript/mathjax/unpacked/@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/theory/*.html sed 's@https://cdn\.jsdelivr\.net/npm/mathjax[@]3/es5/tex-mml-chtml\.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/reference/*.html \ doc/_build/html/theory/*.html # FIXME: references to github are for images part of dipy_data, which # is not available in debian; these may need packaging to solve the # privacy breach here. # Cleanup files landing in non-standard path rm -rfv debian/python3-dipy/usr/doc removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_localpca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_assignment_maps.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/restore_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_tools.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fast_streamline_search.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_cti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/path_length_map.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_stopping_criterion.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_deterministic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtdmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_msdki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_bingham.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_features.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/register_binary_fuzzy.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_multi_tensor.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_introduction_eudx.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/cluster_confidence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_slice.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_shape_similarity.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_quickbundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/quick_start.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_nlmeans.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_forecast.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/brain_extraction_dwi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundlewarp_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/kfold_xval.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_bootstrap_peaks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sh.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_probabilistic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_length.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/combined_workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_gibbs.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_patch2self.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_bundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_gqi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_ptt.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mcsd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/histology_resdnn.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/contextual_enhancement.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/afq_tract_profiles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_extending_clustering_framework.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_roi_contour.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_mppca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_2d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsid.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_masks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_extraction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_fwdti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tissue_classification.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reslice_datasets.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_advanced.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/piesno.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/snr_in_cc.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fiber_to_bundle_coherence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_group_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_ivim.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_ascm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/motion_correction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mapmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/surface_seed.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_formats.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki_micro.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/linear_fascicle_evaluation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/gradients_spheres.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_pft.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtiplus.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_metrics.py' removed directory 'debian/python3-dipy/usr/doc/dipy/examples' removed directory 'debian/python3-dipy/usr/doc/dipy' removed directory 'debian/python3-dipy/usr/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-dipy-doc. If the default is wrong, please use --doc-main-package dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' set -e \ ; test -d debian/python3-dipy/usr/lib || exit 0 \ ; for lib in $(find debian/python3-dipy/usr/lib -name "*.so") \ ; do sdir=$(dirname $lib) \ ; tdir=debian/python3-dipy-lib/${sdir#*python3-dipy/} \ ; mkdir -p "${tdir}" \ ; mv -v "${lib}" "${tdir}" \ ; done renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/core/interpolation.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/reconst/eudx_direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/reconst/eudx_direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/reconst/recspeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/reconst/vec_val_sum.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/reconst/quick_squash.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/crosscorr.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/parzenhist.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/parzenhist.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/vector_fields.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/sumsqdiff.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/transforms.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/transforms.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/bundlemin.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/align/expectmax.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/featurespeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/featurespeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/clusteringspeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/clusteringspeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/mrf.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/cythonutils.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/metricspeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/segment/clustering_algorithms.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/direction/pmf.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/direction/pmf.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/direction/ptt_direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/direction/ptt_direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/denoise/shift_twist_convolution.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/denoise/shift_twist_convolution.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/denoise/denspeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/denoise/pca_noise_estimate.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/denoise/nlmeans_block.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/denoise/enhancement_kernel.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/vox2track.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/vox2track.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/stopping_criterion.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/localtrack.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/localtrack.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/distances.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/propspeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/propspeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/fbcmeasures.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/direction_getter.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/direction_getter.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/tracking/streamlinespeed.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/utils/fast_numpy.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-313-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.13/dist-packages/dipy/utils/omp.cpython-313-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.13/dist-packages/dipy/utils/omp.cpython-313-x86_64-linux-gnu.so' dh_numpy3 -ppython3-dipy-lib dh_python3 W: dh_python3 fs:125: Paths differ: debian/python3-dipy/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache/nodeids and debian/python3-dipy/usr/lib/python3/dist-packages/.pytest_cache/v/cache/nodeids I: dh_python3 pydist:339: Ignoring complex environment marker: tomli; python_version < "3.11" and extra == "doc" make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild debian/rules execute_before_dh_link-indep make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js' make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_compress -X.py -X.html -X.css -X.jpg -X.txt -X.js -X.json -X.rtc \ -X.par -X.bin -Xobjects.inv make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_fixperms -O--buildsystem=pybuild debian/rules execute_after_dh_fixperms-arch make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' # Fix a couple of executables neither elf nor scripts. find debian/python3-dipy/usr/lib/python3*/dist-packages/ \ -name '*.py' \ -exec chmod -x '{}' '+' make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_missing -O--buildsystem=pybuild debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_dwz || true make[1]: Leaving directory '/build/reproducible-path/dipy-1.10.0~rc1' dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-dipy: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-dipy-lib-dbgsym' in '../python3-dipy-lib-dbgsym_1.10.0~rc1-2_amd64.deb'. dpkg-deb: building package 'python-dipy-doc' in '../python-dipy-doc_1.10.0~rc1-2_all.deb'. dpkg-deb: building package 'python3-dipy-lib' in '../python3-dipy-lib_1.10.0~rc1-2_amd64.deb'. dpkg-deb: building package 'python3-dipy' in '../python3-dipy_1.10.0~rc1-2_all.deb'. dpkg-genbuildinfo --build=binary -O../dipy_1.10.0~rc1-2_amd64.buildinfo dpkg-genchanges --build=binary -O../dipy_1.10.0~rc1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dipy-1.10.0~rc1/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/522865/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/522865/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/522865 and its subdirectories I: Current time: Sun Nov 24 06:48:35 +14 2024 I: pbuilder-time-stamp: 1732380515